Update references for Trilinos, PETSc, Mumps, Ginkgo, GSL, CGAL, Gmesh, hdf5.

diff --git a/9.4/paper.bib b/9.4/paper.bib
index 3ba3cdefa9609dc79114df77666f01f5ffc4886e..cb2c6f0364c340f1c7594e2d0a2a2bf8e03cadb8 100644 (file)
--- a/9.4/paper.bib
+++ b/9.4/paper.bib
@@ -496,38 +496,41 @@ Collection of deal.II Manifold Wrappers for the OpenCASCADE Library}},
   volume =       31,
   pages =        {397--423}}
 
+See: https://trilinos.github.io/cite.html
 @Misc{trilinos-web-page,
-     Author      = "M. A. Heroux and others",
-    Title      = "{Trilinos} web page",
-    Note     = "\url{https://trilinos.org}",
-    Year     = "2021"}
-
-# From http://www.mcs.anl.gov/petsc/documentation/referencing.html
-@Misc{petsc-web-page,
-  author = {S. Balay and S. Abhyankar and M.~F. Adams and J. Brown and P. Brune
-            and K. Buschelman and L. Dalcin and V. Eijkhout and W.~D. Gropp
-            and D. Karpeyev and D. Kaushik and M.~G. Knepley
-            and D. May and L. Curfman McInnes and R. Mills and T. Munson
-            and K. Rupp and P. Sanan B.~F. Smith and S. Zampini
-            and H. Zhang and H. Zhang},
-  title =  {{PETS}c {W}eb page},
-  url =    {https://www.mcs.anl.gov/petsc},
-  howpublished = {\url{https://www.mcs.anl.gov/petsc}},
-  year = {2021}
-}
-
-@TechReport{petsc-user-ref,
-  author = {S. Balay and S. Abhyankar and M.~F. Adams and J. Brown and P. Brune
-            and K. Buschelman and L. Dalcin and V. Eijkhout and W.~D. Gropp
-            and D. Karpeyev and D. Kaushik and M.~G. Knepley
-            and D. May and L. Curfman McInnes and R. Mills and T. Munson
-            and K. Rupp and P. Sanan B.~F. Smith and S. Zampini
-            and H. Zhang and H. Zhang},
-  title  = {{PETS}c Users Manual},
+  title = {The {T}rilinos {P}roject {W}ebsite},
+  author = {The {T}rilinos {P}roject {T}eam},
+  year = {2022},
+  url = {https://trilinos.github.io}
+}
+
+See: https://petsc.org/release/#citing-petsc
+@misc{petsc-web-page,
+  author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown
+  and Peter Brune and Kris Buschelman and Emil~M. Constantinescu and Lisandro Dalcin and Alp Dener
+  and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet
+  and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger
+  and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson
+  and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith
+  and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang},
+  title        = {{PETS}c {W}eb page},
+  url          = {https://petsc.org/},
+  howpublished = {\url{https://petsc.org/}},
+  year         = {2022},
+}
+
+@techreport{petsc-user-ref,
+  author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown
+  and Peter Brune and Kris Buschelman and Emil Constantinescu and Lisandro Dalcin and Alp Dener
+  and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet
+  and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger
+  and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson
+  and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith
+  and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang},
+  title       = {{PETSc/TAO} Users Manual},
   institution = {Argonne National Laboratory},
-  year   = 2021,
-  number = {ANL-95/11 - Revision 3.15},
-  url    = {https://www.mcs.anl.gov/petsc}
+  number      = {ANL-21/39 - Revision 3.17},
+  year        = {2022},
 }
 
 
@@ -574,6 +577,7 @@ See: https://p4est.github.io/cite.html
   publisher =    {SIAM, Philadelphia},
   year =         1998}
 
+See: http://mumps.enseeiht.fr/index.php?page=bibtex
 @Misc{mumps-web-page,
   key =          {MUMPS},
   title =        {{MUMPS: a MUltifrontal Massively Parallel sparse direct Solver}},
@@ -610,6 +614,32 @@ See: https://p4est.github.io/cite.html
    pages   = {136-156}
 }
 
+@article{MUMPS:3,
+  title = {{Performance and Scalability of the Block Low-Rank Multifrontal
+  Factorization on Multicore Architectures}},
+  author = {P. R. Amestoy and A. Buttari and J.-Y. L'Excellent and T. Mary},
+  journal = {ACM Transactions on Mathematical Software},
+  volume = {45},
+  issue = {1},
+  pages = {2:1--2:26},
+  year={2019},
+}
+
+See: https://ginkgo-project.github.io/ginkgo/doc/develop/citing_ginkgo.html
+@article{Anzt2022,
+  doi = {10.1145/3480935},
+  url = {https://doi.org/10.1145/3480935},
+  year = {2022},
+  month = mar,
+  publisher = {Association for Computing Machinery ({ACM})},
+  volume = {48},
+  number = {1},
+  pages = {1--33},
+  author = {Hartwig Anzt and Terry Cojean and Goran Flegar and Fritz G\"{o}bel and Thomas Gr\"{u}tzmacher and Pratik Nayak and Tobias Ribizel and Yuhsiang Mike Tsai and Enrique S. Quintana-Ort{\'{\i}}},
+  title = {Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing},
+  journal = {{ACM} Transactions on Mathematical Software}
+}
+
 @Misc{ginkgo-web-page,
   key = {ginkgo},
   title = {Ginkgo: high-performance linear algebra library for manycore
@@ -633,10 +663,11 @@ See: https://p4est.github.io/cite.html
   title =        {{SymEngine: fast symbolic manipulation library, written in C++}},
   note =         {\url{https://symengine.org/}}}
 
+See: http://portal.hdfgroup.org/display/knowledge/How+do+I+properly+cite+HDF5+in+a+paper
 @Misc{hdf5,
     author = {{The HDF Group}},
     title = "{Hierarchical Data Format, version 5}",
-    year = {1997-2018},
+    year = {2022},
     note = {\url{http://www.hdfgroup.org/HDF5/}}
 }
 
@@ -771,11 +802,20 @@ year = {2009}
        Year = {2017},
 }
 
-@misc{gsl2016,
-    author        = {Galassi, M and Davies, J and Theiler, J and Gough, B and Jungman, G and Alken, P and Booth, M and Rossi, F and Ulerich, R},
-    title         = {GNU Scientific Library Reference Manual (Edition 2.3)},
-    journal       = {Library available online at http://www. gnu. org/software/gsl},
-    year          = {2016}
+See: https://www.gnu.org/software/gsl/#moreinfo
+@book{Galassi2009,
+  author = {Galassi, M. and Davies, Jim and Theiler, James and Gough, B. and Jungman, G. and Booth, Michael and Rossi, F.},
+  title = {GNU Scientific Library Reference Manual},
+  year = {2009},
+  isbn = {0954612078},
+  publisher = {Network Theory Ltd.},
+  edition = {3rd}
+}
+
+@Misc{gsl-web-page,
+  key =          {GSL},
+  title =        {{GSL: GNU Scientific Library}},
+  note =         {\url{http://www.gnu.org/software/gsl}}
 }
 
 @misc{nanoflann,
@@ -890,8 +930,9 @@ year = {2009}
        Volume = {121},
        Year = {2018}}
 
+See: https://gmsh.info/
 @article{geuzaine2009gmsh,
-  title={Gmsh: A 3-D finite element mesh generator with built-in pre-and post-processing facilities},
+  title={Gmsh: A {3-D} finite element mesh generator with built-in pre-and post-processing facilities},
   author={Geuzaine, Christophe and Remacle, Jean-Fran{\c{c}}ois},
   journal={International journal for numerical methods in engineering},
   volume={79},
@@ -1340,6 +1381,7 @@ doi = {10.1504/IJCSE.2009.029164}
   doi={10.1145/3458817.3476171}
 }
 
+See: https://doc.cgal.org/latest/Manual/how_to_cite_cgal.html
 @book{ cgal
 , title        = "{CGAL} User and Reference Manual"
 , author      = "{The CGAL Project}"

diff --git a/9.4/paper.tex b/9.4/paper.tex
index eefaf19d3082af63c644fb96d2ad1788e02dbc1f..a5f91161a90a26dbb87e82c751a33746310c98ca 100644 (file)
--- a/9.4/paper.tex
+++ b/9.4/paper.tex
@@ -1094,11 +1094,11 @@ following:
     \item cuSOLVER \cite{cusolver}
     \item cuSPARSE \cite{cusparse}
     \item Gmsh \cite{geuzaine2009gmsh}
-    \item GSL \cite{gsl2016}
-    \item Ginkgo \cite{ginkgo-web-page}
+    \item GSL \cite{Galassi2009,gsl-web-page}
+    \item Ginkgo \cite{Anzt2022,ginkgo-web-page}
     \item HDF5 \cite{hdf5}
     \item METIS \cite{karypis1998fast}
-    \item MUMPS \cite{ADE00,MUMPS:1,MUMPS:2,mumps-web-page}
+    \item MUMPS \cite{ADE00,MUMPS:1,MUMPS:2,MUMPS:3,mumps-web-page}
     \item muparser \cite{muparser-web-page}
     \item OpenCASCADE \cite{opencascade-web-page}
     \item p4est \cite{p4est,burstedde2020parallel}