Change name of the platform from linux to linux_cluster and use a patch to modify...

diff --git a/deal.II/packages/bzip2.package b/deal.II/packages/bzip2.package
index 5350874af097e2adf2e333af24d5a2e7663b77d3..1dcc0bacf0aabfdec99e49ffae00a57f65bfe707 100644 (file)
--- a/deal.II/packages/bzip2.package
+++ b/deal.II/packages/bzip2.package
@@ -6,135 +6,10 @@ BUILDCHAIN=custom
 
 package_specific_build () {
     cp -rf ${UNPACK_PATH}/${NAME}/* .
+  
+    # patch the Makefile 
+    patch -p1 --forward < ${ORIG_DIR}/${PROJECT}/patches/bzip2-1.0.6.patch || true
     
-echo "# ------------------------------------------------------------------
-# This file is part of bzip2/libbzip2, a program and library for
-# lossless, block-sorting data compression.
-#
-# bzip2/libbzip2 version 1.0.6 of 6 September 2010
-# Copyright (C) 1996-2010 Julian Seward <jseward@bzip.org>
-#
-# Please read the WARNING, DISCLAIMER and PATENTS sections in the 
-# README file.
-#
-# This program is released under the terms of the license contained
-# in the file LICENSE.
-# ------------------------------------------------------------------
-#
-# This file has been modified by Bruno Turcksin to be used by candi (2015).
-#
-
-SHELL=/bin/sh
-
-# To assist in cross-compiling
-AR=ar
-RANLIB=ranlib
-LDFLAGS=
-
-BIGFILES=-D_FILE_OFFSET_BITS=64
-CFLAGS=-Wall -fPIC -Winline -O2 -g \$(BIGFILES)
-
-# Where you want it installed when you do 'make install'
-PREFIX=${INSTALL_PATH}
-
-
-OBJS= blocksort.o  \\
-      huffman.o    \\
-      crctable.o   \\
-      randtable.o  \\
-      compress.o   \\
-      decompress.o \\
-      bzlib.o
-
-all: libbz2.a bzip2 bzip2recover test
-
-bzip2: libbz2.a bzip2.o
-       \$(CC) \$(CFLAGS) \$(LDFLAGS) -o bzip2 bzip2.o -L. -lbz2
-
-bzip2recover: bzip2recover.o
-       \$(CC) \$(CFLAGS) \$(LDFLAGS) -o bzip2recover bzip2recover.o
-
-libbz2.a: \$(OBJS)
-       rm -f libbz2.a
-       \$(AR) cq libbz2.a \$(OBJS)
-       @if ( test -f $(RANLIB) -o -f /usr/bin/ranlib -o \\
-               -f /bin/ranlib -o -f /usr/ccs/bin/ranlib ) ; then \\
-               echo \$(RANLIB) libbz2.a ; \\
-               \$(RANLIB) libbz2.a ; \\
-       fi
-
-check: test
-test: bzip2
-       @cat words1
-       ./bzip2 -1  < sample1.ref > sample1.rb2
-       ./bzip2 -2  < sample2.ref > sample2.rb2
-       ./bzip2 -3  < sample3.ref > sample3.rb2
-       ./bzip2 -d  < sample1.bz2 > sample1.tst
-       ./bzip2 -d  < sample2.bz2 > sample2.tst
-       ./bzip2 -ds < sample3.bz2 > sample3.tst
-       cmp sample1.bz2 sample1.rb2 
-       cmp sample2.bz2 sample2.rb2
-       cmp sample3.bz2 sample3.rb2
-       cmp sample1.tst sample1.ref
-       cmp sample2.tst sample2.ref
-       cmp sample3.tst sample3.ref
-       @cat words3
-
-install: bzip2 bzip2recover
-       if ( test ! -d \$(PREFIX)/bin ) ; then mkdir -p \$(PREFIX)/bin ; fi
-       if ( test ! -d \$(PREFIX)/lib ) ; then mkdir -p \$(PREFIX)/lib ; fi
-       if ( test ! -d \$(PREFIX)/include ) ; then mkdir -p \$(PREFIX)/include ; fi
-       cp -f bzip2 \$(PREFIX)/bin/bzip2
-       cp -f bzip2 \$(PREFIX)/bin/bunzip2
-       cp -f bzip2 \$(PREFIX)/bin/bzcat
-       cp -f bzip2recover \$(PREFIX)/bin/bzip2recover
-       chmod a+x \$(PREFIX)/bin/bzip2
-       chmod a+x \$(PREFIX)/bin/bunzip2
-       chmod a+x \$(PREFIX)/bin/bzcat
-       chmod a+x \$(PREFIX)/bin/bzip2recover
-       cp -f bzlib.h \$(PREFIX)/include
-       chmod a+r \$(PREFIX)/include/bzlib.h
-       cp -f libbz2.a \$(PREFIX)/lib
-       chmod a+r \$(PREFIX)/lib/libbz2.a
-       cp -f bzgrep \$(PREFIX)/bin/bzgrep
-       ln -s -f \$(PREFIX)/bin/bzgrep \$(PREFIX)/bin/bzegrep
-       ln -s -f \$(PREFIX)/bin/bzgrep \$(PREFIX)/bin/bzfgrep
-       chmod a+x \$(PREFIX)/bin/bzgrep
-       cp -f bzmore \$(PREFIX)/bin/bzmore
-       ln -s -f \$(PREFIX)/bin/bzmore \$(PREFIX)/bin/bzless
-       chmod a+x \$(PREFIX)/bin/bzmore
-       cp -f bzdiff \$(PREFIX)/bin/bzdiff
-       ln -s -f \$(PREFIX)/bin/bzdiff \$(PREFIX)/bin/bzcmp
-       chmod a+x \$(PREFIX)/bin/bzdiff
-
-
-clean: 
-       rm -f *.o libbz2.a bzip2 bzip2recover \
-       sample1.rb2 sample2.rb2 sample3.rb2 \
-       sample1.tst sample2.tst sample3.tst
-
-blocksort.o: blocksort.c
-       @cat words0
-       \$(CC) \$(CFLAGS) -c blocksort.c
-huffman.o: huffman.c
-       \$(CC) \$(CFLAGS) -c huffman.c
-crctable.o: crctable.c
-       \$(CC) \$(CFLAGS) -c crctable.c
-randtable.o: randtable.c
-       \$(CC) \$(CFLAGS) -c randtable.c
-compress.o: compress.c
-       \$(CC) \$(CFLAGS) -c compress.c
-decompress.o: decompress.c
-       \$(CC) \$(CFLAGS) -c decompress.c
-bzlib.o: bzlib.c
-       \$(CC) \$(CFLAGS) -c bzlib.c
-bzip2.o: bzip2.c
-       \$(CC) \$(CFLAGS) -c bzip2.c
-bzip2recover.o: bzip2recover.c
-       \$(CC) \$(CFLAGS) -c bzip2recover.c
-
-" > Makefile
-
     # compile bzip2
     make install
 }

diff --git a/deal.II/patches/bzip2-1.0.6.patch b/deal.II/patches/bzip2-1.0.6.patch
new file mode 100644 (file)
index 0000000..28f6989
--- /dev/null
+++ b/deal.II/patches/bzip2-1.0.6.patch
@@ -0,0 +1,26 @@
+--- bzip2-1.0.6/Makefile       2010-09-10 17:46:02.000000000 -0500
++++ bzip2-1.0.6.patched/Makefile       2015-06-12 10:06:03.153419669 -0500
+@@ -11,11 +11,13 @@
+ # This program is released under the terms of the license contained
+ # in the file LICENSE.
+ # ------------------------------------------------------------------
++#
++# This file was modified by Bruno Turcksin to be used by candi, 2015
++#
+ 
+ SHELL=/bin/sh
+ 
+ # To assist in cross-compiling
+-CC=gcc
+ AR=ar
+ RANLIB=ranlib
+ LDFLAGS=
+@@ -24,7 +26,7 @@
+ CFLAGS=-Wall -Winline -O2 -g $(BIGFILES)
+ 
+ # Where you want it installed when you do 'make install'
+-PREFIX=/usr/local
++PREFIX=${INSTALL_PATH}
+ 
+ 
+ OBJS= blocksort.o  \

diff --git a/deal.II/platforms/supported/linux.platform b/deal.II/platforms/supported/linux_cluster.platform
similarity index 100%
rename from deal.II/platforms/supported/linux.platform
rename to deal.II/platforms/supported/linux_cluster.platform