// check and illustrate the serialization process for ParticleHandler
-// when the triangulation is fully distributed.
-// In this case, find_active_cell_around_point() currently cannot be used to
-// locate the cells around the particles and so we use a more naive insertion
-// mechanism.
+// for fully distributed triangulations
+
#include <deal.II/distributed/fully_distributed_tria.h>
#include <deal.II/fe/mapping_q.h>
#include "serialization.h"
+template <int dim, int spacedim>
+void
+create_regular_particle_distribution(
+ Particles::ParticleHandler<dim, spacedim> &particle_handler,
+ const parallel::fullydistributed::Triangulation<dim, spacedim> &tr,
+ const unsigned int particles_per_direction = 3)
+{
+ for (unsigned int i = 0; i < particles_per_direction; ++i)
+ for (unsigned int j = 0; j < particles_per_direction; ++j)
+ {
+ Point<spacedim> position;
+ Point<dim> reference_position;
+ unsigned int id = i * particles_per_direction + j;
+
+ position[0] = static_cast<double>(i) /
+ static_cast<double>(particles_per_direction - 1);
+ position[1] = static_cast<double>(j) /
+ static_cast<double>(particles_per_direction - 1);
+
+ if (dim > 2)
+ for (unsigned int k = 0; k < particles_per_direction; ++k)
+ {
+ position[2] = static_cast<double>(j) /
+ static_cast<double>(particles_per_direction - 1);
+ id = i * particles_per_direction * particles_per_direction +
+ j * particles_per_direction + k;
+ Particles::Particle<dim, spacedim> particle(position,
+ reference_position,
+ id);
+
+ typename parallel::fullydistributed::
+ Triangulation<dim, spacedim>::active_cell_iterator cell =
+ GridTools::find_active_cell_around_point(
+ tr, particle.get_location());
+
+ particle_handler.insert_particle(particle, cell);
+ }
+ else
+ {
+ Particles::Particle<dim, spacedim> particle(position,
+ reference_position,
+ id);
+
+ typename parallel::fullydistributed::Triangulation<dim, spacedim>::
+ active_cell_iterator cell =
+ GridTools::find_active_cell_around_point(
+ tr, particle.get_location());
+
+ particle_handler.insert_particle(particle, cell);
+ }
+ }
+}
+
+
+
template <int dim, int spacedim>
void
test()
MappingQ<dim, spacedim> mapping(1);
- // Create ParticleHandler and insert two particles
Particles::ParticleHandler<dim, spacedim> particle_handler(tr, mapping);
- std::vector<Point<spacedim>> position(2);
- std::vector<Point<dim>> reference_position(2);
-
- for (unsigned int i = 0; i < dim; ++i)
- {
- position[0](i) = 0.125;
- position[1](i) = 0.525;
- }
-
- Particles::Particle<dim, spacedim> particle1(position[0],
- reference_position[0],
- 0);
- Particles::Particle<dim, spacedim> particle2(position[1],
- reference_position[1],
- 1);
-
- typename Triangulation<dim, spacedim>::active_cell_iterator cell1(&tr, 2, 0);
- typename Triangulation<dim, spacedim>::active_cell_iterator cell2(&tr, 2, 0);
- particle_handler.insert_particle(particle1, cell1);
- particle_handler.insert_particle(particle2, cell2);
+ create_regular_particle_distribution(particle_handler, tr);
particle_handler.sort_particles_into_subdomains_and_cells();
for (auto particle = particle_handler.begin();
<< " is in cell " << particle->get_surrounding_cell(tr)
<< std::endl;
- particle_handler.prepare_for_serialization();
-
- // save additional particle data to archive
+ // save data to archive
std::ostringstream oss;
{
boost::archive::text_oarchive oa(oss, boost::archive::no_header);
oa << particle_handler;
+ particle_handler.prepare_for_serialization();
tr.save("checkpoint");
// archive and stream closed when
deallog << "In between particle id " << particle->get_id() << " is in cell "
<< particle->get_surrounding_cell(tr) << std::endl;
- // verify correctness of the serialization. Note that the boost
- // archive of the ParticleHandler has to be read before the triangulation
- // (otherwise it does not know if something was stored in the user data of the
+ // verify correctness of the serialization. Note that the deserialization of
+ // the particle handler has to happen before the triangulation (otherwise it
+ // does not know if something was stored in the user data of the
// triangulation).
{
std::istringstream iss(oss.str());
particle_handler.deserialize();
}
- deallog << "After deserialization global number of particles is: "
- << particle_handler.n_global_particles() << std::endl;
for (auto particle = particle_handler.begin();
particle != particle_handler.end();
++particle)
DEAL:0:2d/2d::Before serialization particle id 0 is in cell 2.0
-DEAL:0:2d/2d::Before serialization particle id 1 is in cell 2.12
-DEAL:0:2d/2d::0 0 2 1 2
+DEAL:0:2d/2d::Before serialization particle id 3 is in cell 2.1
+DEAL:0:2d/2d::Before serialization particle id 1 is in cell 2.2
+DEAL:0:2d/2d::Before serialization particle id 4 is in cell 2.3
+DEAL:0:2d/2d::Before serialization particle id 6 is in cell 2.5
+DEAL:0:2d/2d::Before serialization particle id 7 is in cell 2.7
+DEAL:0:2d/2d::Before serialization particle id 2 is in cell 2.10
+DEAL:0:2d/2d::Before serialization particle id 5 is in cell 2.11
+DEAL:0:2d/2d::Before serialization particle id 8 is in cell 2.15
+DEAL:0:2d/2d::0 0 9 1 9
-DEAL:0:2d/2d::After deserialization global number of particles is: 2
DEAL:0:2d/2d::After serialization particle id 0 is in cell 2.0
-DEAL:0:2d/2d::After serialization particle id 1 is in cell 2.12
+DEAL:0:2d/2d::After serialization particle id 3 is in cell 2.1
+DEAL:0:2d/2d::After serialization particle id 1 is in cell 2.2
+DEAL:0:2d/2d::After serialization particle id 4 is in cell 2.3
+DEAL:0:2d/2d::After serialization particle id 6 is in cell 2.5
+DEAL:0:2d/2d::After serialization particle id 7 is in cell 2.7
+DEAL:0:2d/2d::After serialization particle id 2 is in cell 2.10
+DEAL:0:2d/2d::After serialization particle id 5 is in cell 2.11
+DEAL:0:2d/2d::After serialization particle id 8 is in cell 2.15
DEAL:0:2d/2d::OK
DEAL:0:2d/2d::
DEAL:0:2d/3d::Before serialization particle id 0 is in cell 2.0
-DEAL:0:2d/3d::Before serialization particle id 1 is in cell 2.12
-DEAL:0:2d/3d::0 0 2 1 2
+DEAL:0:2d/3d::Before serialization particle id 3 is in cell 2.1
+DEAL:0:2d/3d::Before serialization particle id 1 is in cell 2.2
+DEAL:0:2d/3d::Before serialization particle id 4 is in cell 2.3
+DEAL:0:2d/3d::Before serialization particle id 6 is in cell 2.5
+DEAL:0:2d/3d::Before serialization particle id 7 is in cell 2.7
+DEAL:0:2d/3d::Before serialization particle id 2 is in cell 2.10
+DEAL:0:2d/3d::Before serialization particle id 5 is in cell 2.11
+DEAL:0:2d/3d::Before serialization particle id 8 is in cell 2.15
+DEAL:0:2d/3d::0 0 9 1 9
-DEAL:0:2d/3d::After deserialization global number of particles is: 2
DEAL:0:2d/3d::After serialization particle id 0 is in cell 2.0
-DEAL:0:2d/3d::After serialization particle id 1 is in cell 2.12
+DEAL:0:2d/3d::After serialization particle id 3 is in cell 2.1
+DEAL:0:2d/3d::After serialization particle id 1 is in cell 2.2
+DEAL:0:2d/3d::After serialization particle id 4 is in cell 2.3
+DEAL:0:2d/3d::After serialization particle id 6 is in cell 2.5
+DEAL:0:2d/3d::After serialization particle id 7 is in cell 2.7
+DEAL:0:2d/3d::After serialization particle id 2 is in cell 2.10
+DEAL:0:2d/3d::After serialization particle id 5 is in cell 2.11
+DEAL:0:2d/3d::After serialization particle id 8 is in cell 2.15
DEAL:0:2d/3d::OK
DEAL:0:2d/3d::
DEAL:0:3d/3d::Before serialization particle id 0 is in cell 2.0
-DEAL:0:3d/3d::Before serialization particle id 1 is in cell 2.56
-DEAL:0:3d/3d::0 0 2 1 2
+DEAL:0:3d/3d::Before serialization particle id 1 is in cell 2.0
+DEAL:0:3d/3d::Before serialization particle id 2 is in cell 2.0
+DEAL:0:3d/3d::Before serialization particle id 9 is in cell 2.1
+DEAL:0:3d/3d::Before serialization particle id 10 is in cell 2.1
+DEAL:0:3d/3d::Before serialization particle id 11 is in cell 2.1
+DEAL:0:3d/3d::Before serialization particle id 3 is in cell 2.6
+DEAL:0:3d/3d::Before serialization particle id 4 is in cell 2.6
+DEAL:0:3d/3d::Before serialization particle id 5 is in cell 2.6
+DEAL:0:3d/3d::Before serialization particle id 12 is in cell 2.7
+DEAL:0:3d/3d::Before serialization particle id 13 is in cell 2.7
+DEAL:0:3d/3d::Before serialization particle id 14 is in cell 2.7
+DEAL:0:3d/3d::Before serialization particle id 18 is in cell 2.9
+DEAL:0:3d/3d::Before serialization particle id 19 is in cell 2.9
+DEAL:0:3d/3d::Before serialization particle id 20 is in cell 2.9
+DEAL:0:3d/3d::Before serialization particle id 21 is in cell 2.15
+DEAL:0:3d/3d::Before serialization particle id 22 is in cell 2.15
+DEAL:0:3d/3d::Before serialization particle id 23 is in cell 2.15
+DEAL:0:3d/3d::Before serialization particle id 6 is in cell 2.54
+DEAL:0:3d/3d::Before serialization particle id 7 is in cell 2.54
+DEAL:0:3d/3d::Before serialization particle id 8 is in cell 2.54
+DEAL:0:3d/3d::Before serialization particle id 15 is in cell 2.55
+DEAL:0:3d/3d::Before serialization particle id 16 is in cell 2.55
+DEAL:0:3d/3d::Before serialization particle id 17 is in cell 2.55
+DEAL:0:3d/3d::Before serialization particle id 24 is in cell 2.63
+DEAL:0:3d/3d::Before serialization particle id 25 is in cell 2.63
+DEAL:0:3d/3d::Before serialization particle id 26 is in cell 2.63
+DEAL:0:3d/3d::0 0 27 3 27
-DEAL:0:3d/3d::After deserialization global number of particles is: 2
DEAL:0:3d/3d::After serialization particle id 0 is in cell 2.0
-DEAL:0:3d/3d::After serialization particle id 1 is in cell 2.56
+DEAL:0:3d/3d::After serialization particle id 1 is in cell 2.0
+DEAL:0:3d/3d::After serialization particle id 2 is in cell 2.0
+DEAL:0:3d/3d::After serialization particle id 9 is in cell 2.1
+DEAL:0:3d/3d::After serialization particle id 10 is in cell 2.1
+DEAL:0:3d/3d::After serialization particle id 11 is in cell 2.1
+DEAL:0:3d/3d::After serialization particle id 3 is in cell 2.6
+DEAL:0:3d/3d::After serialization particle id 4 is in cell 2.6
+DEAL:0:3d/3d::After serialization particle id 5 is in cell 2.6
+DEAL:0:3d/3d::After serialization particle id 12 is in cell 2.7
+DEAL:0:3d/3d::After serialization particle id 13 is in cell 2.7
+DEAL:0:3d/3d::After serialization particle id 14 is in cell 2.7
+DEAL:0:3d/3d::After serialization particle id 18 is in cell 2.9
+DEAL:0:3d/3d::After serialization particle id 19 is in cell 2.9
+DEAL:0:3d/3d::After serialization particle id 20 is in cell 2.9
+DEAL:0:3d/3d::After serialization particle id 21 is in cell 2.15
+DEAL:0:3d/3d::After serialization particle id 22 is in cell 2.15
+DEAL:0:3d/3d::After serialization particle id 23 is in cell 2.15
+DEAL:0:3d/3d::After serialization particle id 6 is in cell 2.54
+DEAL:0:3d/3d::After serialization particle id 7 is in cell 2.54
+DEAL:0:3d/3d::After serialization particle id 8 is in cell 2.54
+DEAL:0:3d/3d::After serialization particle id 15 is in cell 2.55
+DEAL:0:3d/3d::After serialization particle id 16 is in cell 2.55
+DEAL:0:3d/3d::After serialization particle id 17 is in cell 2.55
+DEAL:0:3d/3d::After serialization particle id 24 is in cell 2.63
+DEAL:0:3d/3d::After serialization particle id 25 is in cell 2.63
+DEAL:0:3d/3d::After serialization particle id 26 is in cell 2.63
DEAL:0:3d/3d::OK
DEAL:0:3d/3d::