--- /dev/null
+%% Listings environments for Archive of Numerical Software.
+%%
+%% The following listings environments are provided:
+%%
+%% c++ for C++ code
+%% python for Python code
+%% cython for Cython code
+%% xml for XML code
+%% bash for BASH code
+%% swigcode for SWIG code
+%% uflcode for UFL code
+%% matlab for MATLAB code
+%% anycode for generic code
+%% progoutput for program output
+%% gencode for generated code
+%% latexcode for LaTeX code
+%% fortran for FORTRAN code
+%%
+%% This style file is based on original work by Olivier Verdier
+%% <olivier.verdier@math.ntnu.no> (pythonhighlight.sty),
+%% with contributions from Johan Hake <johan.hake@gmail.com>.
+%%
+%% Modified for ANS by Anders Logg <logg@simula.no>, 2011.
+%%
+%% Modified by Hans Petter Langtangen <hpl@simula.no>, 2011, to
+%% have pairs c++ (with C++ title) and c++:nt (no title),
+%% python and python:nt, etc. (It is not always desirable to
+%% have a title with the language.) Added Cython and Fortran style.
+%%
+%% First added: 2011-05-16
+%% Last modified: 2011-06-03
+
+\NeedsTeXFormat{LaTeX2e}
+\ProvidesPackage{anslistings}[2009/03/28 code highlighting; provided by Olivier Verdier <olivier@maths.lth.se>]
+
+% Load required packages
+\RequirePackage{listings}
+\RequirePackage{xcolor}
+
+% Basic setup
+\renewcommand{\lstlistlistingname}{Code Listings}
+\renewcommand{\lstlistingname}{Code Listing}
+\newcommand{\codetitlestyle}[1]{\hspace{9cm}\small\textit{#1}\hspace{0.1cm}}
+%\newcommand{\codetitlestyle}[1]{\small\textit{#1}\hspace{0.1cm}}
+\newcommand{\belowtitleskip}{2pt}
+\newcommand{\captionposition}{t}
+\newcommand{\framemargin}{0.5ex}
+\newcommand{\literatecolour}{\textcolor{literatecolour}}
+
+% Colors
+\definecolor{gray}{gray}{0.5}
+\colorlet{commentcolour}{green!50!black}
+\colorlet{stringcolour}{red!60!black}
+\colorlet{keywordcolour}{magenta!90!black}
+\colorlet{exceptioncolour}{yellow!50!red}
+\colorlet{commandcolour}{blue!60!black}
+\colorlet{numpycolour}{blue!60!green}
+\colorlet{literatecolour}{magenta!90!black}
+\colorlet{promptcolour}{green!50!black}
+\colorlet{specmethodcolour}{violet}
+\colorlet{indendifiercolour}{green!70!white}
+
+% Define the common style to be shared by all languages
+\lstdefinestyle{c@mmon}{%
+showtabs=true, % show tabs in strings using underscore
+tab=,
+tabsize=2, % tab means 2 spaces
+basicstyle=\ttfamily\footnotesize, % fonts used for the code
+breaklines=true, % break lines
+%breakatwhitespace=true, % let linebreaks happen at whitespace
+showspaces=false, % true: show spaces with a particular underscore
+aboveskip=1ex,
+frame=trbl, % top+right+bottom+left (TB draws double lines at top + bottom)
+%framerule=0.4pt % thickness of frame
+rulecolor=\color{black}, % frame color
+backgroundcolor=\color{yellow!10},
+xleftmargin=5pt,
+xrightmargin=5pt,
+%numbers=left, % put line numbers on the left
+%stepnumber=2, % stepnumber=1 numbers each line, =n every n lines
+}
+\lstset{style=c@mmon}
+
+%--- Typesetting LaTeX ---
+\lstnewenvironment{latexcode}{\lstset{language=[LaTeX]TeX,style=c@mmon}}{}
+\newcommand{\inputlatex}[1]{\lstset{language=[LaTeX]TeX,style=c@mmon}%
+ \lstinputlisting{#1}}
+\lstnewenvironment{latexcode:nt}{\lstset{language=[LaTeX]TeX,style=c@mmon}}{}
+
+%--- C++ ---
+
+\lstdefinestyle{cppstyle}{
+language=c++,
+style=c@mmon,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+keywordstyle=\color{keywordcolour}\bfseries,
+emph={auto,const,struct,%
+break,continue,else,for,switch,void,%
+case,default,enum,goto,register,sizeof,typedef,%
+char,do,extern,if,return,static,union,while,%
+asm,dynamic_cast,namespace,reinterpret_cast,try,%
+bool,explicit,new,static_cast,typeid,volatile,%
+catch,operator,template,typename,%
+class,friend,private,this,using,%
+const_cast,inline,public,throw,virtual,%
+delete,mutable,protected,wchar_t,%
+or,and,xor,not,assert},
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+emph={[4]1, 2, 3, 4, 5, 6, 7, 8, 9, 0},
+emph={[4]cos,sin,tan,acos,asin,atan,atan2,cosh,sinh,tanh,%
+exp,frexp,ldexp,log,log10,modf,pow,sqrt,ceil,fabs,floor,fmod},
+emphstyle=[4]\color{numpycolour},
+literate=*%
+{:}{{\literatecolour:}}{1}%
+{=}{{\literatecolour=}}{1}%
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+{+}{{\literatecolour+}}{1}%
+{*}{{\literatecolour*}}{1}%
+{!}{{\literatecolour!}}{1}%
+{[}{{\literatecolour[}}{1}%
+{]}{{\literatecolour]}}{1}%
+{<}{{\literatecolour<}}{1}%
+{>}{{\literatecolour>}}{1}%
+{>>>}{{\textcolor{promptcolour}{>>>}}}{1}%
+,%
+commentstyle=\color{commentcolour}\slshape,
+morecomment=[l][commentstyle]{//},
+morecomment=[s][commentstyle]{/*}{*/},
+morestring=[b][stringstyle]",
+morestring=[d][stringstyle]'
+}
+
+\newcommand{\inputcpp}[1]{\lstinputlisting[style=cppstyle, title={\codetitlestyle{C++ code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{c++}[1][]{\lstset{style=cppstyle, title={\codetitlestyle{C++ code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{c++:nt}[1][]{\lstset{style=cppstyle}}{}
+\newcommand{\cppinline}{\lstinline[style=cppstyle,basicstyle=\ttfamily]}
+
+%--- Python and Cython ---
+
+ \lstdefinestyle{pythonstyle}{
+ language=python,
+ showtabs=true,
+ tab=,
+ tabsize=2,
+ basicstyle=\ttfamily\footnotesize,
+ stringstyle=\color{stringcolour},
+ showstringspaces=false,
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+ keywordstyle=\color{keywordcolour}\bfseries,
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+ except,exec,finally,for,from,global,if,import,in,%
+ lambda,not,or,pass,print,raise,return,try,while,assert},
+ emphstyle=\color{blue}\bfseries,
+ emph={[2]True, False, None},
+ emphstyle=[2]\color{keywordcolour},
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+ emph={Exception,NameError,IndexError,SyntaxError,TypeError,ValueError,OverflowError,ZeroDivisionError},
+ emphstyle=\color{exceptioncolour}\bfseries,
+ commentstyle=\color{commentcolour}\slshape,
+ emph={[4]ode, fsolve, sqrt, exp, sin, cos, arccos, pi, array, norm, solve, dot, arange, , isscalar, max, sum, flatten, shape, reshape, find, any, all, abs, plot, linspace, legend, quad, polyval,polyfit, hstack, concatenate,vstack,column_stack,empty,zeros,ones,rand,vander,grid,pcolor,eig,eigs,eigvals,svd,qr,tan,det,logspace,roll,min,mean,cumsum,cumprod,diff,vectorize,lstsq,cla,eye,xlabel,ylabel,squeeze},
+ emphstyle=[4]\color{numpycolour},
+ emph={[5]__init__,__add__,__mul__,__div__,__sub__,__call__,__getitem__,__setitem__,__eq__,__ne__,__nonzero__,__rmul__,__radd__,__repr__,__str__,__get__,__truediv__,__pow__,__name__,__future__,__all__},
+ emphstyle=[5]\color{specmethodcolour},
+ emph={[6]assert,range,yield},
+ emphstyle=[6]\color{keywordcolour}\bfseries,
+ literate=*%
+ {:}{{\literatecolour:}}{1}%
+ {=}{{\literatecolour=}}{1}%
+ {-}{{\literatecolour-}}{1}%
+ {+}{{\literatecolour+}}{1}%
+ {*}{{\literatecolour*}}{1}%
+ {/}{{\literatecolour/}}{1}%
+ {!}{{\literatecolour!}}{1}%
+ {[}{{\literatecolour[}}{1}%
+ {]}{{\literatecolour]}}{1}%
+ {<}{{\literatecolour<}}{1}%
+ {>}{{\literatecolour>}}{1}%
+ {>>>}{{\textcolor{promptcolour}{>>>}}}{1}%
+ ,%
+ breaklines=true,
+ breakatwhitespace= true,
+ aboveskip=1ex,
+ frame=trbl,
+ framesep=.3ex,
+ rulecolor=\color{black!40},
+ backgroundcolor=\color{yellow!10}
+}
+
+
+ \lstdefinestyle{cythonstyle}{
+ language=cython,
+ showtabs=true,
+ tab=,
+ tabsize=2,
+ basicstyle=\ttfamily\footnotesize,
+ stringstyle=\color{stringcolour},
+ showstringspaces=false,
+ alsoletter={1234567890},
+ otherkeywords={\ , \}, \{, \%, \&, \|},
+ keywordstyle=\color{keywordcolour}\bfseries,
+ emph={and,break,class,continue,def,cdef,cpdef,yield,del,elif ,else,%
+ except,exec,finally,for,from,global,if,import,in,%
+ lambda,not,or,pass,print,raise,return,try,while,assert,cdef,cpdef},
+ emphstyle=\color{blue}\bfseries,
+ emph={[2]True, False, None},
+ emphstyle=[2]\color{keywordcolour},
+ emph={[3]object,type,isinstance,copy,deepcopy,zip,enumerate,reversed,list,len,dict,tuple,xrange,append,execfile,real,imag,reduce,str,repr,float,int,ndarray,complex,double},
+ emphstyle=[3]\color{commandcolour},
+ emph={Exception,NameError,IndexError,SyntaxError,TypeError,ValueError,OverflowError,ZeroDivisionError},
+ emphstyle=\color{exceptioncolour}\bfseries,
+ commentstyle=\color{commentcolour}\slshape,
+ emph={[4]ode, fsolve, sqrt, exp, sin, cos, arccos, pi, array, norm, solve, dot, arange, , isscalar, max, sum, flatten, shape, reshape, find, any, all, abs, plot, linspace, legend, quad, polyval,polyfit, hstack, concatenate,vstack,column_stack,empty,zeros,ones,rand,vander,grid,pcolor,eig,eigs,eigvals,svd,qr,tan,det,logspace,roll,min,mean,cumsum,cumprod,diff,vectorize,lstsq,cla,eye,xlabel,ylabel,squeeze},
+ emphstyle=[4]\color{numpycolour},
+ emph={[5]__init__,__add__,__mul__,__div__,__sub__,__call__,__getitem__,__setitem__,__eq__,__ne__,__nonzero__,__rmul__,__radd__,__repr__,__str__,__get__,__truediv__,__pow__,__name__,__future__,__all__},
+ emphstyle=[5]\color{specmethodcolour},
+ emph={[6]assert,range,yield},
+ emphstyle=[6]\color{keywordcolour}\bfseries,
+ literate=*%
+ {:}{{\literatecolour:}}{1}%
+ {=}{{\literatecolour=}}{1}%
+ {-}{{\literatecolour-}}{1}%
+ {+}{{\literatecolour+}}{1}%
+ {*}{{\literatecolour*}}{1}%
+ {/}{{\literatecolour/}}{1}%
+ {!}{{\literatecolour!}}{1}%
+ {[}{{\literatecolour[}}{1}%
+ {]}{{\literatecolour]}}{1}%
+ {<}{{\literatecolour<}}{1}%
+ {>}{{\literatecolour>}}{1}%
+ {>>>}{{\textcolor{promptcolour}{>>>}}}{1}%
+ ,%
+ breaklines=true,
+ breakatwhitespace= true,
+ aboveskip=1ex,
+ frame=trbl,
+ framesep=.3ex,
+ rulecolor=\color{black!40},
+ backgroundcolor=\color{yellow!10}
+}
+
+\newcommand{\inputpython}[1]{\lstinputlisting[style=pythonstyle,title={\codetitlestyle{Python code }},belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{python}[1][]{\lstset{style=pythonstyle,title={\codetitlestyle{Python code }},belowcaptionskip=\belowtitleskip}}{}
+%\lstnewenvironment{python}[1][]{\lstset{style=pythonstyle,title={\codetitlestyle{Python code }},belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{python:nt}[1][]{\lstset{style=pythonstyle}}{}
+\newcommand{\pythoninline}{\lstinline[style=pythonstyle,basicstyle=\ttfamily]}
+
+
+\newcommand{\inputcython}[1]{\lstinputlisting[style=cythonstyle,title={\codetitlestyle{Cython code }},belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{cython}[1][]{\lstset{style=cythonstyle,title={\codetitlestyle{Cython code }},belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{cython:nt}[1][]{\lstset{style=cythonstyle}}{}
+\newcommand{\cythoninline}{\lstinline[style=cythonstyle,basicstyle=\ttfamily]}
+
+%--- FORTRAN ---
+
+% Note: this is basically FORTRAN 77, not 90, 95, 2003/2008.
+\lstdefinestyle{fortranstyle}{
+language=fortran,
+style=c@mmon,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+keywordstyle=\color{keywordcolour}\bfseries,
+emph={auto,do,while,if,else,end,endif,enddo,%
+subroutine,function,format,program},
+emphstyle=\color{blue}\bfseries,
+emphstyle=[2]\color{keywordcolour},
+emph={[3]double,real,precision,integer,logical},
+emphstyle=[3]\color{blue},
+emph={[4]1, 2, 3, 4, 5, 6, 7, 8, 9, 0},
+emph={[4]cos,sin,tan,acos,asin,atan,atan2,cosh,sinh,tanh,%
+exp,frexp,ldexp,log,log10,modf,pow,sqrt,ceil,fabs,floor,fmod},
+emphstyle=[4]\color{numpycolour},
+literate=*%
+{:}{{\literatecolour:}}{1}%
+{=}{{\literatecolour=}}{1}%
+{-}{{\literatecolour-}}{1}%
+{+}{{\literatecolour+}}{1}%
+{*}{{\literatecolour*}}{1}%
+{!}{{\literatecolour!}}{1}%
+{[}{{\literatecolour[}}{1}%
+{]}{{\literatecolour]}}{1}%
+{<}{{\literatecolour<}}{1}%
+{>}{{\literatecolour>}}{1}%
+,%
+commentstyle=\color{commentcolour}\slshape,
+morecomment=[l][commentstyle]{C}, % need ! as well for F90
+morestring=[b][stringstyle]",
+morestring=[d][stringstyle]'
+}
+
+\newcommand{\inputfortran}[1]{\lstinputlisting[style=fortranstyle, title={\codetitlestyle{FORTRAN code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{fortran}[1][]{\lstset{style=fortranstyle, title={\codetitlestyle{FORTRAN code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{fortran:nt}[1][]{\lstset{style=fortranstyle}}{}
+\newcommand{\fortraninline}{\lstinline[style=fortranstyle,basicstyle=\ttfamily]}
+
+
+%--- XML ---
+
+\lstdefinestyle{xmlstyle}{
+language=xml,
+showtabs=true,
+tab=,
+tabsize=2,
+basicstyle=\ttfamily\footnotesize,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+emphstyle=\color{exceptioncolour}\bfseries,
+commentstyle=\color{commentcolour}\slshape,
+breaklines=true,
+breakatwhitespace= true,
+aboveskip=1ex,
+frame=trbl,
+framesep=.3ex,
+rulecolor=\color{black!40},
+backgroundcolor=\color{yellow!10}
+}
+
+\newcommand{\inputxml}[1]{\lstinputlisting[style=xmlstyle, title={\codetitlestyle{XML code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{xml}[1][]{\lstset{style=xmlstyle, title={\codetitlestyle{XML code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{xml:nt}[1][]{\lstset{style=xmlstyle}}{}
+
+%--- Typesetting Bash ---
+
+\lstdefinestyle{bashstyle}{
+language=bash,
+showtabs=true,
+tab=,
+tabsize=2,
+basicstyle=\ttfamily\footnotesize,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+otherkeywords={\ , \}, \{, \%, \&, \|},
+emphstyle=\color{exceptioncolour}\bfseries,
+commentstyle=\color{commentcolour}\slshape,
+breaklines=true,
+breakatwhitespace= true,
+aboveskip=1ex,
+frame=trbl,
+framesep=.3ex,
+rulecolor=\color{black!40},
+backgroundcolor=\color{yellow!10}
+}
+
+\newcommand{\inputbash}[1]{\lstinputlisting[style=bashstyle, title={\codetitlestyle{Bash code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{bash}[1][]{\lstset{style=bashstyle, title={\codetitlestyle{Bash code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{bash:nt}[1][]{\lstset{style=bashstyle}}{}
+\lstnewenvironment{csh}[1][]{\lstset{style=bashstyle, title={\codetitlestyle{Csh code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{csh:nt}[1][]{\lstset{style=bashstyle}}{}
+
+%--- SWIG ---
+
+\newcommand{\inputswig}[1]{\lstinputlisting[style=cppstyle, title={\codetitlestyle{SWIG code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{swigcode}[1][]{\lstset{style=cppstyle, title={\codetitlestyle{SWIG code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{swigcode:nt}[1][]{\lstset{style=cppstyle}}{}
+
+%--- UFL ---
+
+\newcommand{\inputufl}[1]{\lstinputlisting[style=pythonstyle, title={\codetitlestyle{UFL code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{uflcode}[1][]{\lstset{style=pythonstyle, title={\codetitlestyle{UFL code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{uflcode:nt}[1][]{\lstset{style=pythonstyle}}{}
+
+%--- MATLAB ---
+
+% Note: problem with too large width of frame
+\lstnewenvironment{matlab}[1][]{
+\lstset{
+language=matlab,
+basicstyle=\ttfamily\small,
+backgroundcolor=\color{yellow!10}
+frame=trbl,
+rulecolor=\color{black!40},
+emphstyle=\color{blue},
+commentstyle=\color{commentcolour}\slshape,
+keywordstyle=\color{keywordcolour}\bfseries,
+}}{}
+
+%--- Other ---
+
+\lstdefinestyle{anycodestyle}{
+language=bash,
+showtabs=true,
+tab=,
+tabsize=2,
+basicstyle=\ttfamily\footnotesize,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+emphstyle=\color{exceptioncolour}\bfseries,
+commentstyle=\color{commentcolour}\slshape,
+breaklines=true,
+breakatwhitespace= true,
+aboveskip=1ex,
+frame=trbl,
+framesep=.3ex,
+rulecolor=\color{black!40},
+backgroundcolor=\color{yellow!10}
+}
+
+\newcommand{\inputanycode}[1]{\lstinputlisting[style=anycodestyle, title={\codetitlestyle{Code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{anycode}[1][]{\lstset{style=anycodestyle, title={\codetitlestyle{Code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{anycode:nt}[1][]{\lstset{style=anycodestyle}}{}
+
+%--- Output from running programs ---
+
+\lstnewenvironment{progoutput}[1][]{\lstset{style=gencodestyle, title={\codetitlestyle{Output}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{progoutput:nt}[1][]{\lstset{style=gencodestyle}}{}
+
+%--- Generated code ---
+
+\lstdefinestyle{gencodestyle}{
+language=bash,
+showtabs=true,
+tab=,
+tabsize=2,
+basicstyle=\ttfamily\footnotesize,
+stringstyle=\color{stringcolour},
+showstringspaces=false,
+alsoletter={1234567890},
+emphstyle=\color{exceptioncolour}\bfseries,
+commentstyle=\color{commentcolour}\slshape,
+breaklines=true,
+breakatwhitespace= true,
+aboveskip=1ex,
+frame=trbl,
+framesep=.3ex,
+rulecolor=\color{black!40},
+backgroundcolor=\color{yellow!10}
+}
+
+\newcommand{\inputgencode}[1]{\lstinputlisting[style=cppstyle, title={\codetitlestyle{Generated code}}, belowcaptionskip=\belowtitleskip]{#1}}
+\lstnewenvironment{gencode}[1][]{\lstset{style=gencodestyle, title={\codetitlestyle{Generated code}}, belowcaptionskip=\belowtitleskip}}{}
+\lstnewenvironment{gencode:nt}[1][]{\lstset{style=gencodestyle}}{}
--- /dev/null
+%% do not edit this file, edit in the deal.II main repository, copy here, but
+%% keep this note in here for the next one.
+
+%% The deal.II paper
+
+@Article{BangerthHartmannKanschat2007,
+ title = {deal.{II} --- a General Purpose Object Oriented Finite Element Library},
+ author = {Bangerth, W. and Hartmann, R. and Kanschat, G.},
+ journal = {{ACM} Transactions on Mathematical Software},
+ volume = {33},
+ number = {4},
+ year = {2007},
+ pages = {24--es},
+ doi = {10.1145/1268776.1268779}
+}
+
+@Article{dealII2020design,
+ title = {The {deal.II} finite element library: {D}esign, features, and
+ insights},
+ author = {Daniel Arndt and Wolfgang Bangerth and Denis Davydov and Timo
+ Heister and Luca Heltai and Martin Kronbichler and Matthias Maier
+ and Jean-Paul Pelteret and Bruno Turcksin and David Wells},
+ journal = {Computers \& Mathematics with Applications},
+ volume = {81},
+ pages = {407--422},
+ year = {2021},
+ DOI = {10.1016/j.camwa.2020.02.022},
+}
+
+@Misc{changes84,
+ Title = {List of Changes},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_3_and_8_4.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_3_and_8_4.html}
+}
+
+@Misc{changes85,
+ Title = {List of Changes},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_4_2_and_8_5_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_4_2_and_8_5_0.html}
+}
+
+@Misc{changes90,
+ key={List of Changes},
+ Title = {List of Changes for 9.0},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_5_and_9_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_8_5_0_and_9_0.html}
+}
+
+@Misc{changes91,
+ key={List of Changes},
+ Title = {List of Changes for 9.1},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_0_1_and_9_1_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_0_1_and_9_1_0.html}
+}
+
+@Misc{changes92,
+ key={List of Changes},
+ Title = {List of Changes for 9.2},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_1_1_and_9_2_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_1_1_and_9_2_0.html}
+}
+
+@Misc{changes93,
+ key={List of Changes},
+ Title = {List of Changes for 9.3},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_2_0_and_9_3_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_2_0_and_9_3_0.html}
+}
+
+@Misc{changes94,
+ key={List of Changes},
+ Title = {List of Changes for 9.4},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_3_3_and_9_4_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_3_3_and_9_4_0.html}
+}
+
+@Misc{changes95,
+ key={List of Changes},
+ Title = {List of Changes for 9.5},
+ Note = {\url{https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_4_2_and_9_5_0.html}},
+ Url = {https://www.dealii.org/developer/doxygen/deal.II/changes_between_9_4_2_and_9_5_0.html}
+}
+
+@article{dealII80,
+ title = {The \texttt{deal.II} Library, Version 8.0},
+ author = {W. Bangerth and T. Heister and L. Heltai and G. Kanschat
+ and M. Kronbichler and M. Maier and B. Turcksin and T. D. Young},
+ journal = {arXiv preprint \url{http://arxiv.org/abs/1312.2266v3}},
+ year = {2013},
+}
+
+@article{dealII81,
+ title = {The \texttt{deal.II} Library, Version 8.1},
+ author = {W. Bangerth and T. Heister and L. Heltai and G. Kanschat
+ and M. Kronbichler and M. Maier and B. Turcksin and T. D. Young},
+ journal = {arXiv preprint \url{http://arxiv.org/abs/1312.2266v4}},
+ year = {2013},
+}
+
+@article{dealII82,
+ title = {The \texttt{deal.II} Library, Version 8.2},
+ author = {W. Bangerth and T. Heister and L. Heltai
+ and G. Kanschat and M. Kronbichler
+ and M. Maier and B. Turcksin
+ and T. D. Young},
+ journal = {Archive of Numerical Software},
+ volume = 3,
+ year = {2015},
+}
+
+@article{dealII83,
+ title = {The \texttt{deal.II} Library, Version 8.3},
+ author = {W. Bangerth and T. Heister and L. Heltai
+ and G. Kanschat and M. Kronbichler
+ and M. Maier and B. Turcksin},
+ journal = {Archive of Numerical Software},
+ volume = {4},
+ number = {100},
+ year = {2016},
+ pages = {1--11},
+ issn = {2197-8263},
+ doi = {10.11588/ans.2016.100.23122},
+}
+
+ @article{dealII85,
+ title = {The \texttt{deal.II} Library, Version 8.5},
+ author = {D. Arndt and W. Bangerth and D. Davydov and T. Heister and
+ L. Heltai and M. Kronbichler and M. Maier and J.-P. Pelteret
+ and B. Turcksin and D. Wells},
+ journal = {Journal of Numerical Mathematics},
+ year = {2017},
+ volume = 25,
+ number = 3,
+ pages = {137--146},
+ Doi = {10.1515/jnma-2016-1045}
+ }
+
+@article{dealII84,
+ title = {The \texttt{deal.II} Library, Version 8.4},
+ author = {W. Bangerth and D. Davydov and T. Heister and
+ L. Heltai and G. Kanschat and M. Kronbichler and M. Maier
+ and B. Turcksin and D. Wells},
+ journal = {Journal of Numerical Mathematics},
+ year = {2016},
+ volume = {24},
+ number = {3},
+ pages = {135--141},
+ doi = {10.1515/jnma-2016-1045}
+ }
+
+
+
+@article{dealII90,
+title = {The \texttt{deal.II} Library, Version 9.0},
+author = {G. Alzetta and D. Arndt and W. Bangerth and V. Boddu and
+ B. Brands and D. Davydov and R. Gassmoeller and T. Heister and
+ L. Heltai and K. Kormann and M. Kronbichler and M. Maier and
+ J.-P. Pelteret and B. Turcksin and D. Wells},
+journal = {J. Numer. Math.},
+volume = "26",
+number = "4",
+pages = "173--184",
+year = 2018,
+doi = "10.1515/jnma-2018-0054"
+}
+
+
+@article{dealII91,
+ doi = {10.1515/jnma-2019-0064},
+ url = {https://doi.org/10.1515/jnma-2019-0064},
+ year = {2019},
+ publisher = {Walter de Gruyter {GmbH}},
+ volume = {27},
+ number = {4},
+ pages = {203--213},
+ author = {Daniel Arndt and Wolfgang Bangerth and Thomas C. Clevenger and Denis Davydov and Marc Fehling and Daniel Garcia-Sanchez and Graham Harper and Timo Heister and Luca Heltai and Martin Kronbichler and Ross Maguire Kynch and Matthias Maier and Jean-Paul Pelteret and Bruno Turcksin and David Wells},
+ title = {The \texttt{deal.II} library, Version 9.1},
+ journal = {Journal of Numerical Mathematics}
+}
+
+
+@article{dealII92,
+ title = {The \texttt{deal.II} Library, Version 9.2},
+ author = {Daniel Arndt and Wolfgang Bangerth and Bruno Blais and
+ Thomas C. Clevenger and Marc Fehling and Alexander V. Grayver and
+ Timo Heister and Luca Heltai and Martin Kronbichler and Matthias Maier and
+ Peter Munch and Jean-Paul Pelteret and Reza Rastak and
+ Ignacio Thomas and Bruno Turcksin and Zhuoran Wang and David Wells},
+ journal = {Journal of Numerical Mathematics},
+ publisher = {De Gruyter},
+ year = {2020},
+ volume = {28},
+ number = {3},
+ pages = {131--146},
+ DOI = {10.1515/jnma-2020-0043},
+ url = {https://doi.org/10.1515/jnma-2020-0043}
+}
+
+@article{dealII93,
+ title = {The \texttt{deal.II} Library, Version 9.3},
+ author = {Daniel Arndt and Wolfgang Bangerth and Bruno Blais and
+ Marc Fehling and Rene Gassm{\"o}ller and Timo Heister
+ and Luca Heltai and Uwe K{\"o}cher and Martin
+ Kronbichler and Matthias Maier and Peter Munch and
+ Jean-Paul Pelteret and Sebastian Proell and Konrad
+ Simon and Bruno Turcksin and David Wells and Jiaqi
+ Zhang},
+ journal = {Journal of Numerical Mathematics},
+ year = {2021},
+ url = {https://dealii.org/deal93-preprint.pdf},
+ doi = {10.1515/jnma-2021-0081},
+ volume = {29},
+ number = {3},
+ pages = {171--186}
+}
+
+
+%% The deal.II web page and online reference.
+%% Please cite specific versions only if you really need to
+
+@Manual{DealIIReference,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and T. Heister and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org}
+}
+
+@Manual{DealIIReference600,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/6.0.0},
+ year = 2007
+}
+
+@Manual{DealIIReference610,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/6.1.0},
+ year = 2008
+}
+
+@Manual{DealIIReference621,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/6.2.1},
+ year = 2009
+}
+
+@Manual{DealIIReference631,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/6.3.1},
+ year = 2010
+}
+
+@Manual{DealIIReference700,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/7.0.0},
+ year = 2011
+}
+
+@Manual{DealIIReference710,
+ title = {{\tt deal.{I}{I}} Differential Equations Analysis Library,
+ Technical Reference},
+ author = {W. Bangerth and G. Kanschat},
+ note = {\texttt{http://www.dealii.org}},
+ url = {http://www.dealii.org/7.1.0},
+ year = 2011
+}
+
+%% Additional papers on deal.II and special aspects
+
+@TechReport{BangerthKanschat1999,
+ title = {Concepts for Object-Oriented Finite Element Software -- the \texttt{deal.II} library},
+ address = {Heidelberg},
+ author = {Bangerth, W. and Kanschat, G.},
+ institution = {SFB~359},
+ number = {1999-43},
+ type = {Preprint},
+ year = {1999},
+ url = {http://www.dealii.org/developer/reports/deal-paper.pdf}
+}
+
+
+@article{SartoriGiulianiBardelloni-2018-a,
+ Author = {Sartori, Alberto and Giuliani, Nicola and Bardelloni, Mauro and Heltai, Luca},
+ Journal = {SoftwareX},
+ Pages = {318--327},
+ Title = {{deal2lkit: A toolkit library for high performance programming in deal.II}},
+ Volume = {7},
+ Year = {2018}}
+
+
+@Article{BangerthKayserHerold2007,
+ author = {W. Bangerth and O. Kayser-Herold},
+ title = {Data Structures and Requirements for $hp$ Finite Element
+ Software},
+ journal = {ACM Transactions on Mathematical Software},
+ year = 2009,
+ volume = 36,
+ number = 1,
+ pages = {4/1--31}
+}
+
+@Article{JanssenKanschat2011,
+ author = {Janssen, B. and Kanschat, G.},
+ title = {Adaptive multilevel methods with local smoothing for
+ {${H}^1$}- and {$H^{\text{curl}}$}-conforming high order
+ finite element methods},
+ journal = {SIAM J. Sci. Comput.},
+ year = 2011,
+ volume = 33,
+ number = 4,
+ pages = {2095--2114},
+ doi = {10.1137/090778523}
+}
+
+@Article{Kanschat2004,
+ title = {Multi-level methods for discontinuous {G}alerkin {FEM} on locally refined meshes},
+ author = {Kanschat, G.},
+ journal = {Comput. \& Struct.},
+ number = {28},
+ pages = {2437--2445},
+ volume = {82},
+ year = {2004},
+ doi = {10.1016/j.compstruc.2004.04.015}
+}
+
+@Article{BangerthBursteddeHeisterKronbichler11,
+ author = {W. Bangerth and C. Burstedde and T. Heister
+ and M. Kronbichler},
+ title = {Algorithms and data structures for massively parallel generic
+ adaptive finite element codes},
+ journal = {ACM Transactions on Mathematical Software},
+ year = {2012},
+ volume = {38},
+ number = {2},
+ pages = {14/1--28}
+}
+
+
+@Article{KronbichlerKormann2012,
+ author = {M. Kronbichler and K. Kormann},
+ title = {A generic interface for parallel cell-based finite element operator application},
+ journal = {Comput. Fluids},
+ year = 2012,
+ volume = 63,
+ pages = {135--147}}
+
+@Article{KronbichlerWall2018,
+ author = {Kronbichler, M. and Wall, W. A.},
+ title = {A performance comparison of continuous and discontinuous {G}alerkin
+ methods with fast multigrid solvers},
+ journal = {SIAM J. Sci. Comput.},
+ pages = {A3423--A3448},
+ volume = 40,
+ number = 5,
+ year = 2018,
+ doi = {10.1137/16M110455X}}
+
+@Article{KronbichlerKormann2019,
+ author = {M. Kronbichler and K. Kormann},
+ title = {Fast matrix-free evaluation of discontinuous {G}alerkin finite element operators},
+ journal = {ACM Transactions on Mathematical Software},
+ volume = 45,
+ number = 3,
+ pages = {29/1--40},
+ year = 2019,
+ doi = {10.1145/3325864}}
+
+@Article{KronbichlerLjungkvist2019,
+ author = {Kronbichler, M. and Ljungkvist, K.},
+ title = {Multigrid for Matrix-Free High-Order Finite Element Computations on Graphics Processors},
+ journal = {ACM Transactions on Parallel Compututing},
+ volume = {6},
+ number = {1},
+ pages = {2/1--32},
+ year = 2019}
+
+@article{Fehn2020,
+ doi = {10.1016/j.jcp.2020.109538},
+ year = {2020},
+ volume = {415},
+ pages = {109538},
+ author = {Niklas Fehn and Peter Munch and Wolfgang A. Wall and Martin Kronbichler},
+ title = {Hybrid multigrid methods for high-order discontinuous {G}alerkin discretizations},
+ journal = {Journal of Computational Physics}
+}
+
+
+@inproceedings{Arndt2020sppexa,
+author = {Daniel Arndt and Niklas Fehn and Guido Kanschat and Katharina Kormann and Martin Kronbichler and Peter Munch and Wolfgang A. Wall and Julius Witte},
+title = {{ExaDG} -- High-Order Discontinuous {G}alerkin for the Exa-Scale},
+booktitle="Software for Exascale Computing -- SPPEXA 2016--2019",
+series={Lecture Notes in Computational Science and Engineering 136},
+year="2020",
+publisher="Springer International Publishing",
+address="Cham",
+editor="Bungartz, Hans-Joachim
+and Nagel, Wolfgang E.
+and Reiz, Severin
+and Uekermann, Benjamin
+and Neumann, Philipp",
+doi = {10.1007/978-3-030-47956-5_8}
+}
+
+
+@techreport{DeSimoneHeltaiManigrasso2009,
+ Author = {A. DeSimone and L. Heltai and C. Manigrasso},
+ Institution = {SISSA},
+ Number = {42/2009/M},
+ Title = {Tools for the Solution of {PDEs} Defined on Curved Manifolds with deal.{II}},
+ Year = {2009}}
+
+@techreport{HeltaiMola2015,
+ Author = {L. Heltai and A. Mola},
+ Institution = {SISSA},
+ Title = {{Towards the Integration of CAD and FEM using open source libraries: a
+Collection of deal.II Manifold Wrappers for the OpenCASCADE Library}},
+ Year = 2015}
+
+@article{HeltaiBangerthKronbichlerMola2019,
+ doi = {10.1145/3468428},
+ year = {2021},
+ publisher = {Association for Computing Machinery ({ACM})},
+ volume = {47},
+ number = {4},
+ pages = {32/1--30},
+ author = {Luca Heltai and Wolfgang Bangerth and Martin Kronbichler and Andrea Mola},
+ title = {Propagating Geometry Information to Finite Element Computations},
+ journal = {{ACM} Transactions on Mathematical Software}
+}
+
+@article{trilinos64,
+ author = {C. Jhurani and
+ T. M. Austin and
+ M. A. Heroux and
+ J. M. Willenbring},
+ title = {Supporting 64-bit global indices in {E}petra and other {T}rilinos
+ packages -- {T}echniques used and lessons learned},
+ journal = {arXiv},
+ volume = {1307.6638},
+ year = {2013},
+ ee = {http://arxiv.org/abs/1307.6638},
+ bibsource = {DBLP, http://dblp.uni-trier.de}
+}
+
+
+@Article{BH13,
+ author = {Wolfgang Bangerth and Timo Heister},
+ title = {What makes computational open source software libraries successful?},
+ journal = {Computational Science \& Discovery},
+ year = 2013,
+ volume = 6,
+ pages = {015010/1--18}}
+
+
+@Article{FHB13,
+ author = {J. Frohne and T. Heister and W. Bangerth},
+ title = {Efficient numerical methods for the large-scale, parallel
+ solution of elastoplastic contact problems},
+ journal = {submitted},
+ year = 2013}
+
+@Article{TKB16,
+ author = {B. Turcksin and M. Kronbichler and W. Bangerth},
+ title = {\textit{WorkStream} -- a design pattern for multicore-enabled finite element computations},
+ journal = {ACM Transactions on Mathematical Software},
+ year = 2016,
+ volume = 43,
+ number = 1,
+ pages = {2/1--29}
+}
+
+@Misc{cpp11,
+ key = {C++11},
+ author = {{International Standards Organization}},
+ title = {{ISO/IEC} 14882:2011: The {C}++11 Programming Language Standard},
+ howpublished = {\url{http://www.iso.org/iso/iso_catalogue/catalogue_tc/catalogue_detail.htm?csnumber=50372}},
+ year = 2011}
+
+@Misc{cpp14,
+ key = {C++14},
+ author = {{International Standards Organization}},
+ title = {{ISO/IEC} 14882:2014: The {C}++14 Programming Language Standard},
+ howpublished = {\url{https://www.iso.org/standard/64029.html}},
+ year = 2014}
+
+@Article{heroux2005trilinos,
+ author = {M. A. Heroux and R. A. Bartlett and V. E. Howle and R. J. Hoekstra and J. J. Hu
+ and T. G. Kolda and R. B. Lehoucq and K. R. Long and R. P. Pawlowski and
+ E. T. Phipps and A. G. Salinger and H. K. Thornquist and R. S. Tuminaro and
+ J. M. Willenbring and A. Williams and K. S. Stanley},
+ title = {An overview of the {T}rilinos project},
+ journal = {ACM Transactions on Mathematical Software},
+ year = 2005,
+ volume = 31,
+ pages = {397--423}}
+
+See: https://trilinos.github.io/cite.html
+@Manual{trilinos-web-page,
+ title = {The {T}rilinos {P}roject {W}ebsite},
+ author = {{The Trilinos Project Team}},
+ note = {\url{https://trilinos.github.io/}}
+}
+
+See: https://petsc.org/release/#citing-petsc
+@misc{petsc-web-page,
+ author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown
+ and Peter Brune and Kris Buschelman and Emil~M. Constantinescu and Lisandro Dalcin and Alp Dener
+ and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet
+ and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger
+ and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson
+ and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith
+ and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang},
+ title = {{PETS}c {W}eb page},
+ url = {https://petsc.org/},
+ howpublished = {\url{https://petsc.org/}},
+ year = {2022},
+}
+
+@techreport{petsc-user-ref,
+ author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown
+ and Peter Brune and Kris Buschelman and Emil Constantinescu and Lisandro Dalcin and Alp Dener
+ and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet
+ and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger
+ and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson
+ and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith
+ and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang},
+ title = {{PETSc/TAO} Users Manual},
+ institution = {Argonne National Laboratory},
+ number = {ANL-21/39 - Revision 3.17},
+ year = {2022},
+}
+
+
+@Article{davis2004umfpack,
+ author = {T. A. Davis},
+ title = {Algorithm 832: {UMFPACK V4.3}---an unsymmetric-pattern multifrontal method},
+ journal = {ACM Transactions on Mathematical Software},
+ year = 2004,
+ volume = 30,
+ pages = {196--199}}
+
+@Book{reinders2007tbb,
+ author = {J. Reinders},
+ title = {Intel Threading Building Blocks},
+ publisher = {O'Reilly},
+ year = 2007}
+
+See: https://p4est.github.io/cite.html
+@Article{burstedde2011p4est,
+ author = {C. Burstedde and L. C. Wilcox and O. Ghattas},
+ title = {\texttt{p4est}: {S}calable algorithms for parallel
+ adaptive mesh refinement on forests of octrees},
+ journal = {SIAM J. Sci. Comput.},
+ volume = 33,
+ number = 3,
+ pages = {1103-1133},
+ year = 2011}
+
+@article{burstedde2020parallel,
+ doi = {10.1145/3401990},
+ title={Parallel tree algorithms for {AMR} and non-standard data access},
+ author={Burstedde, Carsten},
+ journal={ACM Transactions on Mathematical Software},
+ volume={46},
+ number={4},
+ pages={32/1--31},
+ year={2020},
+ publisher={ACM New York, NY, USA}
+}
+
+@Book{lehoucq1998arpack,
+ author = {R. B. Lehoucq and D. C. Sorensen and C. Yang},
+ title = {{ARPACK} users' guide: solution of large-scale eigenvalue problems with implicitly restarted Arnoldi methods},
+ publisher = {SIAM, Philadelphia},
+ year = 1998}
+
+See: http://mumps.enseeiht.fr/index.php?page=bibtex
+@Article{amestoy2000,
+ author = {P.R. Amestoy and I.S. Duff and J.-Y. L'Excellent},
+ title = {Multifrontal parallel distributed symmetric and unsymmetric solvers},
+ journal = {Comput. Methods in Appl. Mech. Eng.},
+ year = 2000,
+ volume = 184,
+ pages = {501--520}}
+
+
+@article{amestoy2001mumps,
+ author = {P. R. Amestoy and I. S. Duff and J. Koster and J.-Y. L'Excellent},
+ title = {A Fully Asynchronous Multifrontal Solver Using Distributed Dynamic Scheduling},
+ journal = {SIAM Journal on Matrix Analysis and Applications},
+ volume = {23},
+ number = {1},
+ year = {2001},
+ pages = {15-41}
+}
+
+
+@article{amestoy2006,
+ author = {P. R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},
+ title = {Hybrid scheduling for the parallel solution of linear systems},
+ journal = {Parallel Computing},
+ volume = {32},
+ number = {2},
+ year = {2006},
+ pages = {136-156}
+}
+
+@article{amestoy2019mumps,
+ title = {Performance and Scalability of the Block Low-Rank Multifrontal
+ Factorization on Multicore Architectures},
+ author = {P. R. Amestoy and A. Buttari and J.-Y. L'Excellent and T. Mary},
+ journal = {ACM Transactions on Mathematical Software},
+ volume = {45},
+ issue = {1},
+ pages = {2/1--26},
+ year={2019},
+ publisher = {Association for Computing Machinery},
+ number = {1},
+ issn = {0098-3500},
+ doi = {10.1145/3242094},
+ articleno = {2}
+}
+
+See: https://ginkgo-project.github.io/ginkgo/doc/develop/citing_ginkgo.html
+@article{anzt2022ginkgo,
+ doi = {10.1145/3480935},
+ url = {https://doi.org/10.1145/3480935},
+ year = {2022},
+ publisher = {Association for Computing Machinery ({ACM})},
+ volume = {48},
+ number = {1},
+ pages = {2/1--33},
+ author = {Hartwig Anzt and Terry Cojean and Goran Flegar and Fritz G\"{o}bel and Thomas Gr\"{u}tzmacher and Pratik Nayak and Tobias Ribizel and Yuhsiang Mike Tsai and Enrique S. Quintana-Ort{\'{\i}}},
+ title = {Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing},
+ journal = {{ACM} Transactions on Mathematical Software}
+}
+
+@article{anzt2020ginkgo,
+ doi = {10.21105/joss.02260},
+ url = {https://doi.org/10.21105/joss.02260},
+ year = {2020},
+ publisher = {The Open Journal},
+ volume = {5},
+ number = {52},
+ pages = {2260},
+ author = {Hartwig Anzt and Terry Cojean and Yen-Chen Chen and Goran Flegar and Fritz G\"{o}bel and Thomas Gr\"{u}tzmacher and Pratik Nayak and Tobias Ribizel and Yu-Hsiang Tsai},
+ title = {Ginkgo: A high performance numerical linear algebra library},
+ journal = {Journal of Open Source Software}
+}
+
+@Misc{opencascade-web-page,
+ key = {OpenCASCADE},
+ title = {{OpenCASCADE: Open CASCADE Technology, 3D modeling \& numerical simulation}},
+ note = {\url{http://www.opencascade.org/}}}
+
+@Misc{muparser-web-page,
+ key = {muparser},
+ title = {{muparser: Fast Math Parser Library}},
+ note = {\url{https://beltoforion.de/en/muparser}}}
+
+@Misc{symengine-web-page,
+ key = {symengine},
+ title = {{SymEngine: fast symbolic manipulation library, written in C++}},
+ note = {\url{https://symengine.org/}}}
+
+@Misc{boost-web-page,
+ key = {Boost},
+ title = {{Boost C++ Libraries}},
+ note = {\url{http://www.boost.org/}}}
+
+See: http://portal.hdfgroup.org/display/knowledge/How+do+I+properly+cite+HDF5+in+a+paper
+@Misc{hdf5-web-page,
+ author = {{The HDF Group}},
+ title = "{Hierarchical Data Format, version 5}",
+ year = {2022},
+ note = {\url{http://www.hdfgroup.org/HDF5/}}
+}
+
+@article{karypis1998metis,
+ title={A fast and high quality multilevel scheme for partitioning irregular graphs},
+ author={Karypis, G. and Kumar, V.},
+ journal={SIAM J. Sci. Comput.},
+ volume={20},
+ number={1},
+ pages={359--392},
+ year={1998},
+ publisher={SIAM}
+}
+
+@article{rew1990netcdf,
+ title={{NetCDF}: an interface for scientific data access},
+ author={Rew, R. and Davis, G.},
+ journal={Computer Graphics and Applications, IEEE},
+ volume={10},
+ number={4},
+ pages={76--82},
+ year={1990},
+ publisher={IEEE}
+}
+
+@Article{hernandez2005slepc,
+ author = "V. Hernandez and J. E. Roman and V. Vidal",
+ title = "{SLEPc}: A Scalable and Flexible Toolkit for the Solution of Eigenvalue
+ Problems",
+ journal = "{ACM} Transactions on Mathematical Software",
+ volume = "31",
+ number = "3",
+ pages = "351--362",
+ year = "2005"
+}
+
+@article{Lachat1976,
+author = {Lachat, J. C. and Watson, J. O.},
+doi = {10.1002/nme.1620100503},
+issn = {0029-5981},
+journal = {International Journal for Numerical Methods in Engineering},
+number = {5},
+pages = {991--1005},
+title = {{Effective numerical treatment of boundary integral equations: A formulation for three-dimensional elastostatics}},
+url = {http://doi.wiley.com/10.1002/nme.1620100503},
+volume = {10},
+year = {1976}
+}
+
+@article{Telles-2005-a,
+author = {Telles, JCF},
+journal = {International Journal for Numerical Methods in Engineering},
+mendeley-groups = {FEM},
+mendeley-tags = {filedpapers},
+number = {5},
+publisher = {Wiley Online Library},
+title = {{A self-adaptive co-ordinate transformation for efficient numerical evaluation of general boundary element integrals}},
+type = {Journal article},
+volume = {24},
+year = {2005}
+}
+
+@article{GiulianiMolaHeltai-2015-a,
+author = {Giuliani, Nicola and Mola, Andrea and Heltai, Luca and Formaggia, Luca},
+doi = {10.1016/j.enganabound.2015.04.006},
+file = {:Users/heltai/Library/Mobile Documents/com\~{}apple\~{}CloudDocs/Mendeley//Giuliani et al.\_2015\_FEM SUPG stabilisation of mixed isoparametric BEMs application to linearised free surface flows.pdf:pdf},
+journal = {Engineering Analysis with Boundary Elements},
+keywords = {linearised free surface},
+pages = {8--22},
+title = {{FEM SUPG stabilisation of mixed isoparametric BEMs: application to linearised free surface flows}},
+volume = {59},
+year = {2015}
+}
+
+@book{Cottrell2009,
+author = {Cottrell, JA A and Hughes, TJR J R and Bazilevs, Y.},
+file = {:Users/heltai/Library/Mobile Documents/com\~{}apple\~{}CloudDocs/Mendeley/Cottrell, Hughes, Bazilevs\_2009\_Isogeometric analysis toward integration of CAD and FEA.pdf:pdf},
+mendeley-groups = {Igastokes,Books,Geostrophisics,FEM},
+publisher = {John Wiley \& Sons Inc},
+title = {{Isogeometric analysis: toward integration of CAD and FEA}},
+url = {http://books.google.com/books?hl=en\&lr=\&id=9Q9y0Xtz5E4C\&oi=fnd\&pg=PR5\&dq=Isogeometric+analysis:+toward+integration+of+CAD+and+FEA\&ots=JLSZtYQkL3\&sig=MZdoIBEu1cZs2sAwnPDy4WVOaVE},
+year = {2009}
+}
+
+@book{AbramowitzStegun,
+ author = {M. Abramowitz and I.A. Stegun},
+ title = {Handbook of Mathematical Functions},
+ publisher = {Dover},
+ year = {1965}
+}
+
+@techreport{MadayPatera,
+ author = {Y. Maday and A.T. Patera and E.M. Rønquist},
+ title = {A well-posed optimal spectral element approximation for the {S}tokes problem},
+ number = {87-47},
+ institution = {ICASE},
+ address = {Hampton, VA},
+ year = {1987}
+}
+
+
+@article{MaierBardelloniHeltai-2016-a,
+ Author = {Matthias Maier and Mauro Bardelloni and Luca Heltai},
+ Journal = {Computers and Mathematics with Applications},
+ Title = {Linear{O}perator -- a generic, high-level expression syntax for linear algebra},
+ Doi = {10.1016/j.camwa.2016.04.024},
+ number = {1},
+ pages = {1--24},
+ volume = {72},
+ Year = {2016}}
+
+@misc{MaierBardelloniHeltai-2016-b,
+ author = {Matthias Maier and
+ Mauro Bardelloni and
+ Luca Heltai},
+ title = {{LinearOperator Benchmarks, Version 1.0.0}},
+ year = 2016,
+ doi = {10.5281/zenodo.47202},
+ url = {http://dx.doi.org/10.5281/zenodo.47202}
+}
+
+@article{Davydov2016,
+ Author = {Denis Davydov and Tymofiy Gerasimov and Jean-Paul Pelteret and Paul Steinmann},
+ Day = {12},
+ Doi = {10.1186/s40323-017-0093-0},
+ Issn = {2213-7467},
+ Journal = {Advanced Modeling and Simulation in Engineering Sciences},
+ Month = {Dec},
+ Number = {1},
+ Pages = {7},
+ Title = {Convergence study of the h-adaptive {PUM} and the hp-adaptive {FEM} applied to eigenvalue problems in quantum mechanics},
+ Volume = {4},
+ Year = {2017},
+}
+
+See: https://www.gnu.org/software/gsl/#moreinfo
+@book{galassi2009gsl,
+ author = {Galassi, M. and Davies, Jim and Theiler, James and Gough, B. and Jungman, G. and Booth, Michael and Rossi, F.},
+ title = {GNU Scientific Library Reference Manual},
+ year = {2009},
+ isbn = {0954612078},
+ publisher = {Network Theory Ltd.},
+ edition = {3rd}
+}
+
+@misc{gsl-web-page,
+ key = {GSL},
+ title = {{GSL: GNU Scientific Library}},
+ note = {\url{http://www.gnu.org/software/gsl}}}
+
+@misc{nanoflann,
+ author = {Blanco, Jose Luis and Rai, Prankal Kumar},
+ title = {nanoflann: a {C}++ header-only fork of {FLANN}, a library for
+ {N}earest {N}eighbor ({NN}) with {KD}-trees},
+ howpublished = {\url{https://github.com/jlblancoc/nanoflann}},
+ year = {2014}
+}
+
+@inproceedings{adol-c,
+ author = {A. Walther and A. Griewank},
+ title = {Getting started with {ADOL}-{C}},
+ booktitle = {Combinatorial Scientific Computing},
+ publisher = {U. Naumann and O.Schenk},
+ series = {Chapman-Hall CRC Computational Science},
+ pages = {181-202},
+ year = {2012}
+}
+
+@Article{griewank1996adolc,
+ author = {Griewank, Andreas and Juedes, David and Utke, Jean},
+ title = {Algorithm 755: {ADOL-C}: a package for the automatic differentiation of algorithms written in {C/C++}},
+ journal = {ACM Transactions on Mathematical Software},
+ year = {1996},
+ volume = {22},
+ number = {2},
+ pages = {131--167},
+ doi = {10.1145/229473.229474},
+ publisher = {ACM},
+}
+
+@article{hindmarsh2005sundials,
+ title={{SUNDIALS}: Suite of nonlinear and differential/algebraic equation solvers},
+ author={Hindmarsh, Alan C and Brown, Peter N and Grant, Keith E and Lee, Steven L and Serban, Radu and Shumaker, Dan E and Woodward, Carol S},
+ journal={ACM Transactions on Mathematical Software},
+ volume={31},
+ number={3},
+ pages={363--396},
+ year={2005},
+ publisher={ACM}
+}
+
+@Misc{schulze2021assimp,
+ title={Open asset import library (assimp)},
+ author={Schulze, Thomas and Gessler, Alexander and Kulling, Kim and Nadlinger, David and Klein, Jonathan and Sibly, Mark and Gubisch, Matthias},
+ HowPublished={\url{https://github.com/assimp/assimp}},
+ year={2021}
+}
+
+@Misc{clang-tidy,
+ Title = {{Clang-Tidy}},
+ Author = {LLVM},
+ HowPublished = {\url{http://clang.llvm.org/extra/clang-tidy/}},
+}
+
+@Misc{coverity,
+ Title = {{C}overity {S}can ({Synopsys, Inc.})},
+ Key = {Coverity},
+ HowPublished = {\url{https://scan.coverity.com}},
+}
+
+@TechReport{GHPB16,
+ author = {R. Gassm{\"o}ller and E. Heien and E. G. Puckett and W. Bangerth},
+ title = {Flexible and scalable particle-in-cell methods for massively parallel computations},
+ institution = {arXiv:1612.03369},
+ year = 2016}
+
+
+@Article{KHB12,
+ author = {M. Kronbichler and T. Heister and W. Bangerth},
+ title = {High Accuracy Mantle Convection Simulation through Modern Numerical Methods},
+ journal = {Geophysics Journal International},
+ year = 2012,
+ volume = 191,
+ pages = {12--29}}
+
+@Article{HDGB17,
+ author = {T. Heister and J. Dannberg and R. Gassm{\"o}ller and W. Bangerth},
+ title = {High Accuracy Mantle Convection Simulation through Modern Numerical Methods. {II}: Realistic Models and Problems},
+ journal = {Geophysics Journal International},
+ year = 2017,
+ volume = 210,
+ pages = {833--851}}
+
+@techreport{ridzal2014rol,
+ title={Rapid Optimization Library},
+ author={Ridzal, Denis and Kouri, Drew Philip},
+ year={2014},
+ institution={Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)}
+}
+
+@BOOK{blackford1997scalapack,
+ AUTHOR = {Blackford, L. S. and Choi, J. and Cleary, A. and
+ D'Azevedo, E. and Demmel, J. and Dhillon, I. and
+ Dongarra, J. and Hammarling, S. and Henry, G. and
+ Petitet, A. and Stanley, K. and Walker, D. and
+ Whaley, R. C.},
+ TITLE = {{ScaLAPACK} Users' Guide},
+ PUBLISHER = {Society for Industrial and Applied Mathematics},
+ YEAR = {1997},
+ ADDRESS = {Philadelphia, PA},
+ ISBN = {0-89871-397-8 (paperback)}
+}
+
+@article{GiulianiMolaHeltai-2018-a,
+ Author = {Giuliani, Nicola and Mola, Andrea and Heltai, Luca},
+ Journal = {Advances in Engineering Software},
+ Month = jul,
+ Pages = {39--58},
+ Title = {{$\pi$-BEM: A flexible parallel implementation for adaptive, geometry aware, and high order boundary element methods}},
+ Volume = {121},
+ Year = {2018},
+ doi = {10.1016/j.advengsoft.2018.03.008}
+}
+
+See: https://gmsh.info/
+@article{geuzaine2009gmsh,
+ title={Gmsh: A {3-D} finite element mesh generator with built-in pre-and post-processing facilities},
+ author={Geuzaine, Christophe and Remacle, Jean-Fran{\c{c}}ois},
+ journal={International journal for numerical methods in engineering},
+ volume={79},
+ number={11},
+ pages={1309--1331},
+ year={2009},
+ publisher={Wiley Online Library}
+}
+
+@article{ClevengerHeisterKanschatKronbichler2019,
+ doi = {10.1145/3425193},
+ year = {2021},
+ volume = {47},
+ number = {1},
+ pages = {7/1--27},
+ author = {Thomas C. Clevenger and Timo Heister and Guido Kanschat and Martin Kronbichler},
+ title = {A Flexible, Parallel, Adaptive Geometric Multigrid Method for {FEM}},
+ journal = {{ACM} Transactions on Mathematical Software}
+}
+
+
+@BOOK{anderson1999lapack,
+ AUTHOR = {Anderson, E. and Bai, Z. and Bischof, C. and
+ Blackford, S. and Demmel, J. and Dongarra, J. and
+ Du Croz, J. and Greenbaum, A. and Hammarling, S. and
+ McKenney, A. and Sorensen, D.},
+ TITLE = {{LAPACK} Users' Guide},
+ EDITION = {Third},
+ PUBLISHER = {Society for Industrial and Applied Mathematics},
+ YEAR = {1999},
+ ADDRESS = {Philadelphia, PA},
+ ISBN = {0-89871-447-8 (paperback)}
+}
+
+@misc{Pelteret2016a,
+ author = {Pelteret, J-P. V. and McBride, A.},
+ title = {The \texttt{deal.II} code gallery: Quasi-Static Finite-Strain Compressible Elasticity},
+ year = {2016},
+ url = {https://dealii.org/developer/doxygen/deal.II/code_gallery_Quasi_static_Finite_strain_Compressible_Elasticity.html},
+ note = {Accessed April 2018. doi: \href{http://dx.doi.org/10.5281/zenodo.1228964}{\texttt{10.5281/zenodo.1228964}}},
+ doi = {10.5281/zenodo.1228964},
+}
+
+@InCollection{Bartlett2006a,
+ author = {Bartlett, R. A. and Gay, D. M. and Phipps, E. T.},
+ title = {Automatic Differentiation of C++ Codes for Large-Scale Scientific Computing},
+ booktitle = {International Conference on Computational Science {\textendash} {ICCS} 2006},
+ publisher = {Springer Berlin Heidelberg},
+ year = {2006},
+ editor = {Alexandrov, V.N. and van Albada, G.D. and Sloot, P.M.A. and Dongarra, J.},
+ pages = {525--532},
+ doi = {10.1007/11758549_73},
+ organization = {Springer},
+}
+
+@Misc{cusolver-web-page,
+ key = {cusolver},
+ title = {cu{SOLVER} {L}ibrary},
+ note = {\url{https://docs.nvidia.com/cuda/cusolver/index.html}}
+}
+
+@Misc{cusparse-web-page,
+ key = {cusparse},
+ title = {cu{SPARSE} {L}ibrary},
+ note = {\url{https://docs.nvidia.com/cuda/cusparse/index.html}}
+}
+
+
+@article{BR85,
+ doi = {10.1090/s0025-5718-1985-0771031-7},
+ url = {https://doi.org/10.1090/s0025-5718-1985-0771031-7},
+ year = {1985},
+ publisher = {American Mathematical Society ({AMS})},
+ volume = {44},
+ number = {169},
+ pages = {71--79},
+ author = {Christine Bernardi and Genevi$\lbrace${\`{e}}ve Raugel},
+ title = {Analysis of some finite elements for the {S}tokes problem},
+ journal = {Mathematics of Computation}
+}
+
+@PhdThesis{Zag06,
+ author = {S. Zaglmayr},
+ title = {High Order Finite Element Methods for Electromagnetic Field Computation},
+ school = {Johannes Kepler University, Linz, Austria},
+ year = 2006}
+
+
+@article{Kynch2017,
+ doi = {10.1016/j.compstruc.2016.05.021},
+ url = {https://doi.org/10.1016/j.compstruc.2016.05.021},
+ year = {2017},
+ publisher = {Elsevier {BV}},
+ volume = {181},
+ pages = {41--54},
+ author = {R. M. Kynch and P. D. Ledger},
+ title = {Resolving the sign conflict problem for hp{\textendash}hexahedral {N}{\'{e}}d{\'{e}}lec elements with application to eddy current problems},
+ journal = {Computers {\&} Structures}
+}
+
+@inproceedings{ljungkvist2017,
+ author = {Ljungkvist, Karl},
+ title = {Matrix-free Finite-element Computations on Graphics Processors with Adaptively Refined Unstructured Meshes},
+ booktitle = {Proceedings of the 25th High Performance Computing Symposium},
+ series = {HPC '17},
+ year = {2017},
+ isbn = {978-1-5108-3822-2},
+ location = {Virginia Beach, Virginia},
+ pages = {1/1--12},
+ articleno = {1},
+ numpages = {12},
+ url = {http://dl.acm.org/citation.cfm?id=3108096.3108097},
+ acmid = {3108097},
+ publisher = {Society for Computer Simulation International},
+ address = {San Diego, CA, USA},
+ keywords = {GPU, adaptive refinement, finite element methods, hanging nodes, matrix free},
+}
+
+@techreport{munch2020hyperdeal,
+ title={hyper.deal: An efficient, matrix-free finite-element library for high-dimensional partial differential equations},
+ author={Peter Munch and Katharina Kormann and Martin Kronbichler},
+ year={2021},
+ institution={arXiv:2002.08110, accepted for publication in the ACM Transactions on Mathematical Software}
+}
+
+@article{Gordon82,
+author = {Gordon, William J. and Thiel, Linda C.},
+title = {Transfinite mappings and their application to grid generation},
+journal = {Appl. Math. Comput.},
+volume = 10,
+pages = {171--233},
+year = 1982,
+doi = {10.1016/0096-3003(82)90191-6}
+}
+
+@article{BabuskaSuri1990,
+ title = {The p- and h-p versions of the finite element method, an overview},
+ author = {Babuška, I. and Suri, M.},
+ year = {1990},
+ journal = {Computer Methods in Applied Mechanics and Engineering},
+ volume = {80},
+ pages = {5--26},
+ issn = {0045-7825},
+ doi = {10.1016/0045-7825(90)90011-A},
+ number = {1}
+}
+
+@article{Mavriplis1994,
+ title = {Adaptive mesh strategies for the spectral element method},
+ author = {Mavriplis, C.},
+ year = {1994},
+ journal = {Computer Methods in Applied Mechanics and Engineering},
+ volume = {116},
+ pages = {77--86},
+ issn = {0045-7825},
+ doi = {10.1016/S0045-7825(94)80010-3},
+ number = {1}
+}
+
+@article{MelenkWohlmuth2001,
+ title = {On residual-based a posteriori error estimation in \textit{hp}-{{FEM}}},
+ author = {Melenk, J. M. and Wohlmuth, B. I.},
+ year = {2001},
+ journal = {Advances in Computational Mathematics},
+ volume = {15},
+ pages = {311--331},
+ issn = {1019-7168, 1572-9044},
+ doi = {10.1023/A:1014268310921},
+ number = {1-4}
+}
+
+@inproceedings{HoustonSeniorSueli2003,
+ title = {Sobolev regularity estimation for hp-adaptive finite element methods},
+ booktitle = {Numerical {{Mathematics}} and {{Advanced Applications}}},
+ author = {Houston, P. and Senior, B. and Süli, E.},
+ editor = {Brezzi, Franco and Buffa, Annalisa and Corsaro, Stefania and Murli, Almerico},
+ year = {2003},
+ pages = {631--656},
+ publisher = {{Springer Milan}},
+ location = {{Milano}},
+ doi = {10.1007/978-88-470-2089-4_58},
+ isbn = {978-88-470-2089-4}
+}
+
+@article{HoustonSueli2005,
+ title = {A note on the design of \textit{hp}-adaptive finite element methods for elliptic partial differential equations},
+ author = {Houston, P. and Süli, E.},
+ year = {2005},
+ journal = {Computer Methods in Applied Mechanics and Engineering},
+ volume = {194},
+ pages = {229--243},
+ issn = {0045-7825},
+ doi = {10.1016/j.cma.2004.04.009},
+ number = {2}
+}
+
+@article{EibnerMelenk2007,
+ title = {An adaptive strategy for \textit{hp}-{{FEM}} based on testing for analyticity},
+ author = {Eibner, T. and Melenk, J. M.},
+ year = {2007},
+ journal = {Computational Mechanics},
+ volume = {39},
+ pages = {575--595},
+ issn = {1432-0924},
+ doi = {10.1007/s00466-006-0107-0},
+ number = {5}
+}
+
+
+
+@Article{GLHPB18,
+ doi = {10.1029/2018gc007508},
+ url = {https://doi.org/10.1029/2018gc007508},
+ year = {2018},
+ publisher = {American Geophysical Union ({AGU})},
+ volume = {19},
+ number = {9},
+ pages = {3596--3604},
+ author = {Rene Gassm\"{o}ller and Harsha Lokavarapu and Eric Heien and Elbridge Gerry Puckett and Wolfgang Bangerth},
+ title = {Flexible and Scalable Particle-in-Cell Methods With Adaptive Mesh Refinement for Geodynamic Computations},
+ journal = {Geochemistry, Geophysics, Geosystems}
+}
+
+@article{Brenner2005,
+ doi = {10.1007/s10915-004-4135-7},
+ url = {https://doi.org/10.1007/s10915-004-4135-7},
+ year = {2005},
+ publisher = {Springer Science and Business Media {LLC}},
+ volume = {22-23},
+ number = {1-3},
+ pages = {83--118},
+ author = {Susanne C. Brenner and Li-Yeng Sung},
+ title = {$C^0$ Interior Penalty Methods for Fourth Order Elliptic Boundary Value Problems on Polygonal Domains},
+ journal = {Journal of Scientific Computing}
+}
+
+@Article{clevenger_stokes19,
+ Title = {Comparison between Algebraic and Matrix-free Geometric Multigrid for a {S}tokes Problem},
+ Author = {Thomas C. Clevenger and Timo Heister},
+ Journal = {submitted},
+ Year = {2019},
+ Url = {https://arxiv.org/abs/1907.06696}
+}
+
+@article{logg2012,
+author = {Logg, Anders},
+year = {2009},
+number = {4},
+title = {Efficient Representation of Computational Meshes},
+volume = {4},
+pages={283--295},
+journal = {Int. J. Computational Science and Engineering Int. J. Computational Science and Engineering},
+doi = {10.1504/IJCSE.2009.029164}
+}
+
+@article{becker2000multigrid,
+ title={Multigrid techniques for finite elements on locally refined meshes},
+ author={Becker, Roland and Braack, Malte},
+ journal={Numerical linear algebra with applications},
+ volume={7},
+ number={6},
+ pages={363--379},
+ year={2000},
+ publisher={Wiley Online Library}
+}
+
+@inproceedings{sundar2012parallel,
+ title={Parallel geometric-algebraic multigrid on unstructured forests of octrees},
+ author={Sundar, Hari and Biros, George and Burstedde, Carsten and Rudi, Johann and Ghattas, Omar and Stadler, Georg},
+ booktitle={SC'12: Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis},
+ pages={1--11},
+ year={2012},
+ organization={IEEE}
+}
+
+@article{witherden2015identification,
+ title={On the identification of symmetric quadrature rules for finite element methods},
+ author={Witherden, Freddie D and Vincent, Peter E},
+ journal={Computers \& Mathematics with Applications},
+ volume={69},
+ number={10},
+ pages={1232--1241},
+ year={2015},
+ publisher={Elsevier}
+}
+
+@Misc{schloemer21,
+ author = {Nico Schl\"omer},
+ Title = {quadpy: Your one-stop shop for numerical integration in python},
+ Note = {\url{https://github.com/nschloe/quadpy/}},
+ Url = {https://github.com/nschloe/quadpy/},
+ year={2021}
+}
+
+@article{lebrun2020arborx,
+ title={{ArborX}: {A} Performance Portable Geometric Search Library},
+ author={Lebrun-Grandi{\'e}, Damien and Prokopenko, Andrey and Turcksin, Bruno and Slattery, Stuart R},
+ journal={ACM Transactions on Mathematical Software},
+ volume={47},
+ number={1},
+ pages={2/1--15},
+ year={2020},
+ publisher={ACM New York, NY, USA},
+ doi={10.1145/3412558}
+}
+
+@article{bungartz2016precice,
+ title={preCICE--a fully parallel library for multi-physics surface coupling},
+ author={Bungartz, Hans-Joachim and Lindner, Florian and Gatzhammer, Bernhard and Mehl, Miriam and Scheufele, Klaudius and Shukaev, Alexander and Uekermann, Benjamin},
+ journal={Computers \& Fluids},
+ volume={141},
+ pages={250--258},
+ year={2016},
+ publisher={Elsevier}
+}
+
+@article{lindner2020exafsa,
+ title={ExaFSA: Parallel Fluid-Structure-Acoustic Simulation},
+ author={Lindner, Florian and Totounferoush, Amin and Mehl, Miriam and Uekermann, Benjamin and Pour, Neda Ebrahimi and Krupp, Verena and Roller, Sabine and Reimann, Thorsten and Sternel, D{\"o}rte C and Egawa, Ryusuke and others},
+ journal={Software for Exascale Computing-SPPEXA 2016-2019},
+ volume={136},
+ pages={271},
+ year={2020},
+ publisher={Springer Nature}
+}
+
+@article{golshan2022lethe,
+ title={Lethe-DEM: An open-source parallel discrete element solver with load balancing},
+ author={Golshan, Shahab and Munch, Peter and Gassm{\"o}ller, Rene and Kronbichler, Martin and Blais, Bruno},
+ journal={Computational Particle Mechanics},
+ pages={1--20},
+ year={2022},
+ publisher={Springer}
+}
+
+@article{mirzadeh2016parallel,
+ title={Parallel level-set methods on adaptive tree-based grids},
+ author={Mirzadeh, Mohammad and Guittet, Arthur and Burstedde, Carsten and Gibou, Frederic},
+ journal={Journal of Computational Physics},
+ volume={322},
+ pages={345--364},
+ year={2016},
+ publisher={Elsevier}
+}
+
+@article{hoefler2010scalable,
+ title={Scalable communication protocols for dynamic sparse data exchange},
+ author={Hoefler, Torsten and Siebert, Christian and Lumsdaine, Andrew},
+ journal={ACM Sigplan Notices},
+ volume={45},
+ number={5},
+ pages={159--168},
+ year={2010},
+ publisher={ACM New York, NY, USA}
+}
+
+@article{ibanez2016pumi,
+ title={PUMI: Parallel unstructured mesh infrastructure},
+ author={Ibanez, Daniel A and Seol, E Seegyoung and Smith, Cameron W and Shephard, Mark S},
+ journal={ACM Transactions on Mathematical Software},
+ volume={42},
+ number={3},
+ pages={17/1--28},
+ year={2016},
+ publisher={ACM New York, NY, USA}
+}
+
+@misc{munch2022gc,
+ title={Efficient distributed matrix-free multigrid methods on locally refined meshes for {FEM} computations},
+ author= {Munch, Peter and Heister, Timo and Prieto Saavedra, Laura and Kronbichler, Martin},
+ year= {2022},
+ url = {https://arxiv.org/abs/2203.12292}
+}
+
+@incollection{munch2022hn,
+ title = {Efficient application of hanging-node constraints for matrix-free high-order FEM computations on {CPU} and {GPU}},
+ author = {Munch, Peter and Ljungkvist, Karl and Kronbichler, Martin},
+ booktitle = {ISC High Performance 2022},
+ editor = {A.-L. Varbanescu and A. Bhatele and P. Luszczek and B. Marc},
+ series = {LNCS},
+ volume = 13289,
+ pages = {133--152},
+ year = {2022},
+ publisher = {Springer International Publishing},
+ doi = {10.1007/978-3-031-07312-0_7}
+}
+
+@inproceedings{ljungkvist2017matrix,
+ title={Matrix-free finite-element computations on graphics processors with adaptively refined unstructured meshes.},
+ author={Ljungkvist, Karl},
+ booktitle={SpringSim (HPC)},
+ pages={1--1},
+ year={2017}
+}
+
+@article{saye2015,
+ title = {High-{Order} {Quadrature} {Methods} for {Implicitly} {Defined} {Surfaces} and {Volumes} in {Hyperrectangles}},
+ volume = {37},
+ issn = {1064-8275, 1095-7197},
+ url = {http://epubs.siam.org/doi/10.1137/140966290},
+ doi = {10.1137/140966290},
+ language = {en},
+ number = {2},
+ urldate = {2016-01-27},
+ journal = {SIAM Journal on Scientific Computing},
+ author = {Saye, R. I.},
+ year = {2015},
+ pages = {A993--A1019}
+}
+
+@article{burman_cutfem_2015,
+ title = {{{CutFEM}}: {{Discretizing}} Geometry and Partial Differential Equations},
+ shorttitle = {{{CutFEM}}},
+ author = {Burman, Erik and Claus, Susanne and Hansbo, Peter and Larson, Mats G. and Massing, Andr{\'e}},
+ year = {2015},
+ journal = {International Journal for Numerical Methods in Engineering},
+ volume = {104},
+ number = {7},
+ pages = {472--501},
+ issn = {00295981},
+ doi = {10.1002/nme.4823},
+ langid = {english}
+}
+
+@article{kronbichler2022cg,
+ title = {Enhancing data locality of the conjugate gradient method for
+ high-order matrix-free finite-element implementations},
+ author = {Martin Kronbichler and Dmytro Sashko and Peter Munch},
+ journal = {The International Journal of High Performance Computing Applications},
+ year = {2022},
+ volume = {in press}
+}
+
+@inproceedings{kronbichler2021next,
+ title={A next-generation discontinuous {G}alerkin fluid dynamics solver with application to high-resolution lung airflow simulations},
+ author={Kronbichler, Martin and Fehn, Niklas and Munch, Peter and Bergbauer, Maximilian and Wichmann, Karl-Robert and Geitner, Carolin and Allalen, Momme and Schulz, Martin and Wall, Wolfgang A},
+ booktitle={Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, SC'21},
+ pages={1--15},
+ address={St. Louis, MO, USA},
+ year={2021},
+ publisher={Association for Computing Machinery ({ACM})},
+ doi={10.1145/3458817.3476171}
+}
+
+See: https://doc.cgal.org/latest/Manual/how_to_cite_cgal.html
+@book{cgal-user-ref,
+ title = {{CGAL} User and Reference Manual},
+ author = {{The CGAL Project}},
+ publisher = {{CGAL Editorial Board}},
+ edition = {{5.4.1}},
+ year = 2022,
+ note = {\url{https://doc.cgal.org/5.4.1/Manual/packages.html}}
+}
+
+
+@misc{fehling2022,
+ doi = {10.48550/ARXIV.2206.06512},
+ url = {https://arxiv.org/abs/2206.06512},
+ author = {Fehling, Marc and Bangerth, Wolfgang},
+ keywords = {Numerical Analysis (math.NA), Mathematical Software (cs.MS), FOS: Mathematics, FOS: Computer and information sciences, G.1.8; G.4},
+ title = {Algorithms for Parallel Generic $hp$-adaptive Finite Element Software},
+ publisher = {arXiv},
+ year = {2022},
+ copyright = {arXiv.org perpetual, non-exclusive license}
+}
+
+@article{orlando2021efficient,
+ title={An efficient and accurate implicit DG solver for the incompressible Navier-Stokes equations},
+ author={Orlando, Giuseppe and Della Rocca, Alessandro and Barbante, Paolo Francesco and Bonaventura, Luca and Parolini, Nicola},
+ journal={International Journal for Numerical Methods in Fluids},
+ year={2021},
+ publisher={Wiley Online Library}
+}
+
+@inproceedings{hammond2014int_max,
+ title={To INT\_MAX... and beyond! Exploring large-count support in MPI},
+ author={Hammond, Jeff R and Sch{\"a}fer, Andreas and Latham, Rob},
+ booktitle={2014 Workshop on Exascale MPI at Supercomputing Conference},
+ pages={1--8},
+ year={2014},
+ organization={IEEE}
+}
+
+@article{massing2013efficient,
+ title={Efficient implementation of finite element methods on nonmatching and overlapping meshes in three dimensions},
+ author={Massing, Andr{\'e} and Larson, Mats G and Logg, Anders},
+ journal={SIAM Journal on Scientific Computing},
+ volume={35},
+ number={1},
+ pages={C23--C47},
+ year={2013},
+ publisher={SIAM}
+}
+
+@article{heinz2023high,
+ title={High-order non-conforming discontinuous {G}alerkin methods for the acoustic conservation equations},
+ author={Heinz, Johannes and Munch, Peter and Kaltenbacher, Manfred},
+ journal={International Journal for Numerical Methods in Engineering},
+ volume={124},
+ number={9},
+ pages={2034--2049},
+ year={2023},
+ publisher={Wiley Online Library}
+}
+
+@article{adams2002evaluation,
+ title={Evaluation of three unstructured multigrid methods on 3D finite element problems in solid mechanics},
+ author={Adams, Mark},
+ journal={International Journal for Numerical Methods in Engineering},
+ volume={55},
+ number={5},
+ pages={519--534},
+ year={2002},
+ publisher={Wiley Online Library}
+}
+
+@article{bittencourt2001nonnested,
+ title={Nonnested multigrid methods for linear problems},
+ author={Bittencourt, Marco L. and Douglas, Craig C. and Feij{\'o}o, Ra{\'u}l A.},
+ journal={Numerical Methods for Partial Differential Equations: An International Journal},
+ volume={17},
+ number={4},
+ pages={313--331},
+ year={2001},
+ publisher={Wiley Online Library}
+}
+
+@article{bramble1991analysis,
+ title={The analysis of multigrid algorithms with nonnested spaces or noninherited quadratic forms},
+ author={Bramble, James H. and Pasciak, Joseph E. and Xu, Jinchao},
+ journal={Mathematics of Computation},
+ volume={56},
+ number={193},
+ pages={1--34},
+ year={1991}
+}
+
+@article{proell2023highly,
+ title={A highly efficient computational framework for fast scan-resolved simulations of metal additive manufacturing processes on the scale of real parts},
+ author={Proell, Sebastian D and Munch, Peter and Kronbichler, Martin and Wall, Wolfgang A and Meier, Christoph},
+ journal={arXiv preprint arXiv:2302.05164},
+ year={2023}
+}
+
+@article{lottes2022optimal,
+ title={Optimal polynomial smoothers for multigrid {V}-cycles},
+ author={Lottes, James},
+ journal={arXiv preprint arXiv:2202.08830},
+ year={2022}
+}
+
+@article{phillips2022optimal,
+ title={Optimal {C}hebyshev Smoothers and One-sided {V}-cycles},
+ author={Phillips, Malachi and Fischer, Paul},
+ journal={arXiv preprint arXiv:2210.03179},
+ year={2022}
+}
+
+@article{lynch1964direct,
+ title={Direct solution of partial difference equations by tensor product methods},
+ author={Lynch, Robert E and Rice, John R and Thomas, Donald H},
+ journal={Numerische Mathematik},
+ volume={6},
+ number={1},
+ pages={185--199},
+ year={1964},
+ publisher={Springer}
+}
+
+@article{kronbichler2019hermite,
+ title={A {H}ermite-like basis for faster matrix-free evaluation of interior penalty discontinuous {G}alerkin operators},
+ author={Kronbichler, Martin and Kormann, Katharina and Fehn, Niklas and Munch, Peter and Witte, Julius},
+ journal={arXiv preprint arXiv:1907.08492},
+ year={2019}
+}
+
+@article{witte2021fast,
+ title={Fast tensor product {S}chwarz smoothers for high-order discontinuous {G}alerkin methods},
+ author={Witte, Julius and Arndt, Daniel and Kanschat, Guido},
+ journal={Computational Methods in Applied Mathematics},
+ volume={21},
+ number={3},
+ pages={709--728},
+ year={2021},
+ publisher={De Gruyter}
+}
+
+@article{phillips2021auto,
+ title={Auto-Tuned Preconditioners for the Spectral Element Method on GPUs},
+ author={Phillips, Malachi and Kerkemeier, Stefan and Fischer, Paul},
+ journal={arXiv preprint arXiv:2110.07663},
+ year={2021}
+}
+
+@techreport{couzy1995spectral,
+ title={Spectral element discretization of the unsteady {N}avier--{S}tokes equations and its iterative solution on parallel computers},
+ author={Couzy, Wouter},
+ year={1995},
+ institution={EPFL}
+}
+
+@article{trott2022,
+ author={Trott, Christian R. and Lebrun-Grandié, Damien and Arndt, Daniel and Ciesko, Jan and Dang, Vinh and Ellingwood, Nathan and Gayatri, Rahulkumar and Harvey, Evan and Hollman, Daisy S. and Ibanez, Dan and Liber, Nevin and Madsen, Jonathan and Miles, Jeff and Poliakoff, David and Powell, Amy and Rajamanickam, Sivasankaran and Simberg, Mikael and Sunderland, Dan and Turcksin, Bruno and Wilke, Jeremiah},
+ journal={IEEE Transactions on Parallel and Distributed Systems},
+ title={Kokkos 3: Programming Model Extensions for the Exascale Era},
+ year={2022},
+ volume={33},
+ number={4},
+ pages={805-817},
+ doi={10.1109/TPDS.2021.3097283}
+}
+
+@article{kronbichler2016comparison,
+ doi = {10.1002/nme.5137},
+ year = {2016},
+ volume = {106},
+ number = {9},
+ pages = {712--739},
+ author = {Martin Kronbichler and Svenja Schoeder and Christopher M\"{u}ller and Wolfgang A. Wall},
+ title = {Comparison of implicit and explicit hybridizable discontinuous {G}alerkin methods for the acoustic wave equation},
+ journal = {Int. J. Numer. Meth. Eng.}
+}
+
+@article{zhang2021petscsf,
+ title={The {PetscSF} scalable communication layer},
+ author={Zhang, Junchao and Brown, Jed and Balay, Satish and Faibussowitsch, Jacob and Knepley, Matthew and Marin, Oana and Mills, Richard Tran and Munson, Todd and Smith, Barry F and Zampini, Stefano},
+ journal={{IEEE} Transactions on Parallel and Distributed Systems},
+ volume={33},
+ number={4},
+ pages={842--853},
+ year={2021},
+ publisher={IEEE}
+}
+
+@article{knoll2004jacobian,
+ title={Jacobian-free {N}ewton--{K}rylov methods: a survey of approaches and applications},
+ author={Knoll, Dana A and Keyes, David E},
+ journal={Journal of Computational Physics},
+ volume={193},
+ number={2},
+ pages={357--397},
+ year={2004},
+ publisher={Elsevier}
+}
+
+@article{brune2015composing,
+ title={Composing scalable nonlinear algebraic solvers},
+ author={Brune, Peter R and Knepley, Matthew G and Smith, Barry F and Tu, Xuemin},
+ journal={SIAM Review},
+ volume={57},
+ number={4},
+ pages={535--565},
+ year={2015},
+ publisher={SIAM}
+}
+
+@article{abhyankar2018petsc,
+ title={{PETS}c/{TS}: A modern scalable {ODE}/{DAE} solver library},
+ author={Abhyankar, Shrirang and Brown, Jed and Constantinescu, Emil M and Ghosh, Debojyoti and Smith, Barry F and Zhang, Hong},
+ journal={arXiv preprint arXiv:1806.01437},
+ year={2018}
+}
--- /dev/null
+\documentclass{ansarticle-preprint}
+%\usepackage{ucs}
+\usepackage[utf8]{inputenc}
+\usepackage{amsmath}
+%\usepackage{cite}
+\usepackage{anslistings}
+\usepackage{multicol}
+\usepackage{pdfsync}
+\usepackage{enumitem}
+
+\usepackage{pgfplots}
+\usepackage{pgfplotstable}
+
+\usepackage{fontenc}
+\usepackage{graphicx}
+\usepackage{xspace}
+
+\usepackage{siunitx}
+
+\usepackage{floatflt}
+
+\usepackage{multirow}
+
+\usepackage{booktabs}
+
+%\renewcommand{\baselinestretch}{2.0}
+%\usepackage{lineno}
+%\renewcommand\linenumberfont{\normalfont\tiny}
+%\linenumbers
+
+\graphicspath{{svg/}}
+
+\usepackage[normalem]{ulem}
+
+\usepackage{caption}
+\usepackage{subcaption}
+
+\usepackage{todonotes}
+
+\pgfplotsset{compat=1.9}
+\definecolor{gnuplot@lightblue}{RGB}{87,181,232}
+\definecolor{gnuplot@green}{RGB}{0,158,115}
+\definecolor{gnuplot@purple}{RGB}{148,0,212}
+
+\newcommand{\specialword}[1]{\texttt{#1}}
+\newcommand{\dealii}{{\specialword{deal.II}}\xspace}
+\newcommand{\pfrst}{{\specialword{p4est}}\xspace}
+\newcommand{\trilinos}{{\specialword{Trilinos}}\xspace}
+\newcommand{\aspect}{\specialword{Aspect}\xspace}
+\newcommand{\petsc}{\specialword{PETSc}\xspace}
+\newcommand{\snes}{{\specialword{SNES}}\xspace}
+\newcommand{\ts}{{\specialword{TS}}\xspace}
+\newcommand{\petscsf}{{\specialword{SF}}\xspace}
+\newcommand{\cmake}{{\specialword{CMake}}\xspace}
+\newcommand{\candi}{{\specialword{candi}}\xspace}
+\newcommand{\sundials}{{\specialword{SUNDIALS}}\xspace}
+\newcommand{\kinsol}{{\specialword{KINSOL}}\xspace}
+\newcommand{\ida}{{\specialword{IDA}}\xspace}
+\newcommand{\arkode}{{\specialword{ARKODE}}\xspace}
+\newcommand{\boost}{{\specialword{Boost}}\xspace}
+\newcommand{\kokkos}{{\specialword{Kokkos}}\xspace}
+
+
+\usetikzlibrary{shapes.misc}
+\tikzset{cross/.style={cross out, draw=black, minimum size=2*(#1-\pgflinewidth), inner sep=0pt, outer sep=0pt},
+%default radius will be 1pt.
+cross/.default={2pt}}
+
+%
+% Author list -- please add yourself in both places below (in
+% alphabetical order) if you think that your
+% contributions to the last release warrant this
+%
+
+\hypersetup{
+ pdfauthor={
+ Daniel Arndt,
+ Wolfgang Bangerth,
+ Marc Fehling,
+ Johannes Heinz,
+ Timo Heister,
+ Luca Heltai,
+ Martin Kronbichler,
+ Matthias Maier,
+ Peter Munch,
+ Bruno Turcksin,
+ David Wells
+ },
+ pdftitle={The deal.II Library, Version 9.6, 2024},
+}
+
+\title{The \dealii Library, Version 9.6}
+
+ \author[1*]{Daniel Arndt}
+ \affil[1]{Computational Coupled Physics Group,
+ Computational Sciences and Engineering Division,
+ Oak Ridge National Laboratory, 1 Bethel Valley Rd.,
+ TN 37831, USA.
+ \texttt{arndtd/turcksinbr@ornl.gov}}
+
+ \author[2,3]{Wolfgang~Bangerth}
+ \affil[2]{Department of Mathematics, Colorado State University, Fort
+ Collins, CO 80523-1874, USA.
+ \texttt{bangerth/marc.fehling@colostate.edu}}
+ \affil[3]{Department of Geosciences, Colorado State University, Fort
+ Collins, CO 80523, USA.}
+
+\author[4]{Marc~Fehling}
+ \affil[4]{Charles University, Czech Republic}
+
+\author[5]{Timo~Heister}
+ \affil[5]{School of Mathematical and Statistical Sciences,
+ Clemson University,
+ Clemson, SC, 29634, USA
+ {\texttt{heister@clemson.edu}}}
+
+\author[6]{Luca~Heltai}
+\affil[6]{University of Pisa, Italy}
+
+ \author[7]{Martin~Kronbichler}
+ \affil[7]{Ruhr University Bochum, Germany}
+
+\author[8]{Matthias~Maier}
+\affil[8]{Department of Mathematics,
+ Texas A\&M University,
+ 3368 TAMU,
+ College Station, TX 77845, USA.
+ {\texttt{maier@math.tamu.edu}}}
+
+\author[9]{Peter Munch}
+ \affil[9]{Uppsala University, Sweden.
+ {\texttt{peter.munch@it.uu.se}}}
+
+\author[1*]{Bruno~Turcksin}
+
+\author[10]{David Wells}
+\affil[10]{Department of Mathematics, University of North Carolina,
+ Chapel Hill, NC 27516, USA.
+ {\texttt{drwells@email.unc.edu}}}
+
+\renewcommand{\labelitemi}{--}
+
+
+\begin{document}
+\maketitle
+
+\footnotetext{%
+ $^\ast$ This manuscript has been authored by UT-Battelle, LLC under Contract No.
+ DE-AC05-00OR22725 with the U.S. Department of Energy.
+ % We need to submit the manuscript with the text below. If the editor
+ % complains we can remove it.
+ The United States
+ Government retains and the publisher, by accepting the article for
+ publication, acknowledges that the United States Government retains a
+ non-exclusive, paid-up, irrevocable, worldwide license to publish or reproduce
+ the published form of this manuscript, or allow others to do so, for United
+ States Government purposes. The Department of Energy will provide public
+ access to these results of federally sponsored research in accordance with the
+ DOE Public Access Plan (http://energy.gov/downloads/doe-public-access-plan).
+}
+
+
+\begin{abstract}
+ This paper provides an overview of the new features of the finite element
+ library \dealii, version 9.6.
+\end{abstract}
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Overview}
+
+\dealii version 9.6.0 was released X X, 2024.
+This paper provides an
+overview of the new features of this release and serves as a citable
+reference for the \dealii software library version 9.6. \dealii is an
+object-oriented finite element library used around the world in the
+development of finite element solvers. It is available for free under the
+GNU Lesser General Public License (LGPL). Downloads are available at
+\url{https://www.dealii.org/} and \url{https://github.com/dealii/dealii}.
+
+The major changes of this release are:
+%
+\begin{itemize}
+ \item
+\end{itemize}
+%
+
+While all of these major changes are discussed in detail in
+Section~\ref{sec:major}, there
+are a number of other noteworthy changes in the current \dealii release,
+which we briefly outline in the remainder of this section:
+%
+\begin{itemize}
+ \item changes of interface of AffineConstraints
+ \item clean up: orientation
+\end{itemize}
+%
+The changelog lists more than X other features and bugfixes.
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Major changes to the library}
+\label{sec:major}
+
+This release of \dealii contains a number of large and significant changes,
+which will be discussed in this section.
+It of course also includes a
+vast number of smaller changes and added functionality; the details of these
+can be found
+\href{https://dealii.org/developer/doxygen/deal.II/changes_between_9_4_2_and_9_5_0.html}
+{in the file that lists all changes for this release}; see \cite{changes95}.
+
+
+\begin{itemize}
+\item Hermite element
+\item simplices: cubic simplex elements, improved refinement of tetrahedron cells
+\item Tpetra advances
+\item Nedelec for meshes with hanging nodes
+\end{itemize}
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\subsection{Updates to matrix-free algorithms}\label{sec:mf}
+
+\begin{itemize}
+\item VectorizedArray for ARM Neon
+\end{itemize}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\subsection{Advances in non-matching support}\label{sec:nonmatching}
+
+\begin{itemize}
+\item non-nested multigrid: new features and performance improvement
+\item FERemoteEvaluation
+\item FEColungValues
+\end{itemize}
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\subsection{New and improved tutorials and code gallery programs}
+\label{subsec:steps}
+
+Many of the \dealii tutorial programs were revised in a variety of ways
+as part of this release. In addition, there are a number of new tutorial
+programs:
+\begin{itemize}
+ \item
+ \texttt{step-87} was contributed by Magdalena Schreter-Fleischhacker
+ (Technical University of Munich) and Peter Munch
+ (University of Augsburg/Uppsala University). It
+ presents the advanced point-evaluation functionalities of \dealii,
+ specifically useful for evaluating finite element solutions at
+ arbitrary points on finite element meshes that can be distributed among processes.
+ \item
+ \texttt{step-89} was contributed by Johannes Heinz (TU Wien),
+ Maximilian Bergbauer (Technical University of Munich),
+ Marco Feder (SISSA), and Peter Munch (University of Augsburg/Uppsala University).
+ It shows one way how to apply non-matching and/or Chimera methods
+ within matrix-free loops in \dealii.
+ \item
+ \texttt{step-90} was contributed by Vladimir Yushutin and Timo Heister (Clemson University).
+ It implements the trace finite element method (TraceFEM). TraceFEM solves PDEs
+ posed on a possibly evolving $(dim-1)$-dimensional surface $\Gamma$ employing
+ a fixed uniform background mesh of a $dim$-dimensional domain in which
+ the surface is embedded. Such surface PDEs arise in problems involving
+ material films with complex properties and in other situations in which
+ a non-trivial condition is imposed on either a stationary or a moving interface.
+ Here we consider a steady, complex, non-trivial surface and the prototypical
+ Laplace-Beltrami equation which is a counterpart of
+ the Poisson problem on flat domains.
+\end{itemize}
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\subsection{Incompatible changes}\label{subsec:deprecated}
+
+The 9.6 release includes
+\href{https://dealii.org/developer/doxygen/deal.II/changes_between_9_5_2_and_9_6_0.html}
+ {around X incompatible changes};
+see \cite{changes96}. Many of these
+incompatibilities change internal
+interfaces that are not usually used in external
+applications. That said, the following are worth mentioning since they
+may have been more widely used:
+\begin{itemize}
+ \item CUDAWrappers
+\end{itemize}
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{How to cite \dealii}\label{sec:cite}
+
+In order to justify the work the developers of \dealii put into this
+software, we ask that papers using the library reference one of the
+\dealii papers. This helps us justify the effort we put into this library.
+
+There are various ways to reference \dealii. To acknowledge the use of
+the current version of the library, \textbf{please reference the present
+ document}. For up-to-date information and a bibtex entry
+see
+\begin{center}
+ \url{https://www.dealii.org/publications.html}
+\end{center}
+
+The original \dealii paper containing an overview of its
+architecture is \cite{BangerthHartmannKanschat2007}, and a more recent
+publication documenting \dealii's design decisions is available as \cite{dealII2020design}. If you rely on
+specific features of the library, please consider citing any of the
+following:
+\begin{multicols}{2}
+ \vspace*{-36pt}
+ \begin{itemize}[leftmargin=4mm]
+ \item For geometric multigrid: \cite{Kanschat2004,JanssenKanschat2011,ClevengerHeisterKanschatKronbichler2019, munch2022gc};
+ \item For distributed parallel computing: \cite{BangerthBursteddeHeisterKronbichler11};
+ \item For $hp$-adaptivity: \cite{BangerthKayserHerold2007,fehling2022};
+ \item For partition-of-unity (PUM) and finite element enrichment methods:
+ \cite{Davydov2016};
+ \item For matrix-free and fast assembly techniques:
+ \cite{KronbichlerKormann2012,KronbichlerKormann2019};
+ \item For computations on lower-dimensional manifolds:
+ \cite{DeSimoneHeltaiManigrasso2009};
+ \item For curved geometry representations and manifolds:
+ \cite{HeltaiBangerthKronbichlerMola2019};
+ \item For integration with CAD files and tools:
+ \cite{HeltaiMola2015};
+ \item For boundary element computations:
+ \cite{GiulianiMolaHeltai-2018-a};
+ \item For the \texttt{LinearOperator} and
+ \texttt{Packaged\-Operation} facilities:
+ \cite{MaierBardelloniHeltai-2016-a,MaierBardelloniHeltai-2016-b};
+ \item For uses of the \texttt{WorkStream} interface:
+ \cite{TKB16};
+ \item For uses of the \texttt{ParameterAcceptor} concept, the
+ \texttt{MeshWorker::ScratchData} base class, and the
+ \texttt{ParsedConvergenceTable} class:
+ \cite{SartoriGiulianiBardelloni-2018-a};
+ \item For uses of the particle functionality in \dealii:
+ \cite{GLHPB18}.
+ \vfill\null
+ \end{itemize}
+\end{multicols}
+
+\dealii can interface with many other libraries:
+\begin{multicols}{3}
+ \begin{itemize}[leftmargin=4mm]
+ \item ADOL-C \cite{griewank1996adolc}
+ \item ArborX \cite{lebrun2020arborx}
+ \item ARPACK \cite{lehoucq1998arpack}
+ \item Assimp \cite{schulze2021assimp}
+ \item BLAS and LAPACK \cite{anderson1999lapack}
+ \item Boost \cite{boost-web-page}
+ \item CGAL \cite{cgal-user-ref}
+ \item cuSOLVER \cite{cusolver-web-page}
+ \item cuSPARSE \cite{cusparse-web-page}
+ \item Gmsh \cite{geuzaine2009gmsh}
+ \item GSL \cite{galassi2009gsl,gsl-web-page}
+ \item Ginkgo \cite{anzt2020ginkgo,anzt2022ginkgo}
+ \item HDF5 \cite{hdf5-web-page}
+ \item METIS \cite{karypis1998metis}
+ \item MUMPS \cite{amestoy2001mumps,amestoy2019mumps}
+ \item muparser \cite{muparser-web-page}
+ \item OpenCASCADE \cite{opencascade-web-page}
+ \item p4est \cite{burstedde2011p4est,burstedde2020parallel}
+ \item PETSc \cite{petsc-user-ref,petsc-web-page}
+ \item ROL \cite{ridzal2014rol}
+ \item ScaLAPACK \cite{blackford1997scalapack}
+ \item SLEPc \cite{hernandez2005slepc}
+ \item SUNDIALS \cite{hindmarsh2005sundials}
+ \item SymEngine \cite{symengine-web-page}
+ \item TBB \cite{reinders2007tbb}
+ \item Trilinos \cite{heroux2005trilinos,trilinos-web-page}
+ \item UMFPACK \cite{davis2004umfpack}
+ \end{itemize}
+\end{multicols}
+Please consider citing the appropriate references if you use
+interfaces to these libraries.
+
+The two previous releases of \dealii can be cited as
+\cite{dealII92,dealII93}.
+
+
+\section{Acknowledgments}
+
+\dealii is a worldwide project with dozens of contributors around the
+globe. Other than the authors of this paper, the following people
+contributed code to this release:\\
+%
+% Uwe Koecher doesn't usually show up in the changelog, but
+% we should make sure he's listed.
+%
+
+% This is up-to-date as of 2023-06-26 7:00pm central
+\begin{quote}
+TODO
+\end{quote}
+Their contributions are much appreciated!
+
+
+\bigskip
+
+\dealii and its developers are financially supported through a
+variety of funding sources:
+
+D.~Arndt and B.~Turcksin: Research sponsored by the Laboratory Directed Research and
+Development Program of Oak Ridge National Laboratory, managed by UT-Battelle,
+LLC, for the U. S. Department of Energy.
+
+W.~Bangerth and T.~Heister were partially
+supported by the Computational Infrastructure for Geodynamics initiative
+(CIG), through the National Science Foundation (NSF) under Award
+No.~EAR-1550901 and EAR-2149126 via The University of California -- Davis.
+
+W.~Bangerth and M.~Fehling were partially supported by Award OAC-1835673
+as part of the Cyberinfrastructure for Sustained Scientific Innovation (CSSI)
+program.
+
+W.~Bangerth was also partially supported by Awards DMS-1821210 and EAR-1925595.
+
+M.~Bergbauer was supported by the German Research Foundation (DFG) under the
+project ``High-Performance Cut Discontinuous Galerkin Methods for Flow
+Problems and Surface-Coupled Multiphysics Problems'' Grant Agreement
+No.~456365667.
+
+J.~Heinz was supported by the European Union’s Framework Programme for Research
+and Innovation Horizon 2020 (2014-2020) under the Marie Sk\l{}odowska--Curie Grant
+Agreement No. [812719].
+
+T.~Heister was also partially supported by NSF
+Awards OAC-2015848, DMS-2028346, and
+EAR-1925575.
+
+L.~Heltai and M~.Feder were partially supported by the Italian Ministry of
+University and Research (MUR), under the grant MUR PRIN 2022 No. 2022WKWZA8
+``Immersed methods for multiscale and multiphysics problems (IMMEDIATE)''.
+
+M.~Kronbichler and P.~Munch were partially supported by the
+German Ministry of Education and Research, project
+``PDExa: Optimized software methods for solving partial differential
+equations on exascale supercomputers'' and the Bayerisches Kompetenznetzwerk
+f\"ur Technisch-Wissen\-schaft\-li\-ches Hoch- und H\"ochstleistungsrechnen
+(KONWIHR), projects ``High-order matrix-free finite
+element implementations with hybrid parallelization and improved data
+locality'' and ``Fast and scalable finite element algorithms for coupled
+multiphysics problems and non-matching grids''.
+
+M.~Maier was partially supported by NSF Award DMS-2045636 and and by the
+Air Force Office of Scientific Research under grant/contract number
+FA9550-23-1-0007.
+
+D.~Wells was supported by the NSF Award OAC-1931516.
+
+S. Zampini was supported by the KAUST Extreme Computing Research Center.
+
+Clemson University is acknowledged for generous allotment of compute time on Palmetto cluster.
+
+The authors acknowledge the Texas Advanced Computing Center (TACC) at The University of Texas at Austin for providing HPC resources that have contributed to the research results reported within this paper. \url{http://www.tacc.utexas.edu}
+
+This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number ACI-1053575 access through the CIG Science Gateway and Community Codes for the Geodynamics Community MCA08X011 allocation.
+
+
+\bibliography{paper}{}
+\bibliographystyle{abbrv}
+
+\end{document}
projects / release-papers.git / commitdiff