]> https://gitweb.dealii.org/ - dealii.git/commitdiff
Reindent the bibtex entries.
authorDavid Wells <wellsd2@rpi.edu>
Sat, 30 Jun 2018 04:11:52 +0000 (00:11 -0400)
committerDavid Wells <wellsd2@rpi.edu>
Sat, 30 Jun 2018 04:11:52 +0000 (00:11 -0400)
Since some lines were longer than 80 characters clang-format made a mess
here. Clean it up by splitting lines manually around fields.

include/deal.II/base/mpi.h
include/deal.II/base/symmetric_tensor.h
include/deal.II/fe/fe_enriched.h
include/deal.II/fe/fe_p1nc.h
include/deal.II/lac/precondition.h
include/deal.II/lac/utilities.h
include/deal.II/numerics/error_estimator.h
include/deal.II/physics/notation.h

index a86996fe0836e55e0d4a0321017caadede602959..f5966c2bc0ae0bcdd71b234dc3d829d9cd9e5bd8 100644 (file)
@@ -149,14 +149,14 @@ namespace Utilities
      * following publication:
      * @code{.bib}
      * @inproceedings{dinan2011noncollective,
-     *  title={Noncollective communicator creation in MPI},
-     *  author={Dinan, James and Krishnamoorthy, Sriram and Balaji, Pavan and
-     *          Hammond, Jeff R and Krishnan, Manojkumar and Tipparaju, Vinod
-     *          and Vishnu, Abhinav},
-     *  booktitle={European MPI Users' Group Meeting},
-     *  pages={282--291},
-     *  year={2011},
-     *  organization={Springer}
+     *   title        = {Noncollective communicator creation in MPI},
+     *   author       = {Dinan, James and Krishnamoorthy, Sriram and Balaji,
+     *                   Pavan and Hammond, Jeff R and Krishnan, Manojkumar and
+     *                   Tipparaju, Vinod and Vishnu, Abhinav},
+     *   booktitle    = {European MPI Users' Group Meeting},
+     *   pages        = {282--291},
+     *   year         = {2011},
+     *   organization = {Springer}
      * }
      * @endcode
      */
index df45f4d3c4c79ed3c57049f21b23328a16e1bd01..634c36ceac807cb08967654b5df5cf0d3b186ac6 100644 (file)
@@ -2900,26 +2900,31 @@ namespace internal
      * Tridiagonalize a rank-2 symmetric tensor using the Householder method.
      * The specialized algorithm implemented here is given in
      * @code{.bib}
-     * @Article{Kopp2008,
-     *   title        = {Efficient numerical diagonalization of hermitian 3x3
-     * matrices}, author       = {Kopp, J.}, journal      = {International
-     * Journal of Modern Physics C}, year         = {2008}, volume       = {19},
-     *   number       = {3},
-     *   pages        = {523--548},
-     *   doi          = {10.1142/S0129183108012303},
-     *   eprinttype   = {arXiv},
-     *   eprint       = {physics/0610206v3},
-     *   eprintclass  = {physics.comp-ph},
-     *   url          =
+     * @article{Kopp2008,
+     *   title       = {Efficient numerical diagonalization of hermitian 3x3
+     *                  matrices},
+     *   author      = {Kopp, J.},
+     *   journal     = {International Journal of Modern Physics C},
+     *   year        = {2008},
+     *   volume      = {19},
+     *   number      = {3},
+     *   pages       = {523--548},
+     *   doi         = {10.1142/S0129183108012303},
+     *   eprinttype  = {arXiv},
+     *   eprint      = {physics/0610206v3},
+     *   eprintclass = {physics.comp-ph},
+     *   url         =
      * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
      * }
      * @endcode
      * and is based off of the generic algorithm presented in section 11.3.2 of
      * @code{.bib}
-     * @Book{Press2007,
-     *   title        = {Numerical recipes 3rd edition: The art of scientific
-     * computing}, author       = {Press, W. H.}, journal      = {Cambridge
-     * university press}, year         = {2007}
+     * @book{Press2007,
+     *   title   = {Numerical recipes 3rd edition: The art of scientific
+     *              computing},
+     *   author  = {Press, W. H.},
+     *   journal = {Cambridge university press},
+     *   year    = {2007}
      * }
      * @endcode
      *
@@ -2944,26 +2949,31 @@ namespace internal
      * symmetric tensor using the QL algorithm with implicit shifts.
      * The specialized algorithm implemented here is given in
      * @code{.bib}
-     * @Article{Kopp2008,
-     *   title        = {Efficient numerical diagonalization of hermitian 3x3
-     * matrices}, author       = {Kopp, J.}, journal      = {International
-     * Journal of Modern Physics C}, year         = {2008}, volume       = {19},
-     *   number       = {3},
-     *   pages        = {523--548},
-     *   doi          = {10.1142/S0129183108012303},
-     *   eprinttype   = {arXiv},
-     *   eprint       = {physics/0610206v3},
-     *   eprintclass  = {physics.comp-ph},
-     *   url          =
+     * @article{Kopp2008,
+     *   title       = {Efficient numerical diagonalization of hermitian 3x3
+     *                  matrices},
+     *   author      = {Kopp, J.},
+     *   journal     = {International Journal of Modern Physics C},
+     *   year        = {2008},
+     *   volume      = {19},
+     *   number      = {3},
+     *   pages       = {523--548},
+     *   doi         = {10.1142/S0129183108012303},
+     *   eprinttype  = {arXiv},
+     *   eprint      = {physics/0610206v3},
+     *   eprintclass = {physics.comp-ph},
+     *   url         =
      * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
      * }
      * @endcode
      * and is based off of the generic algorithm presented in section 11.4.3 of
      * @code{.bib}
-     * @Book{Press2007,
-     *   title        = {Numerical recipes 3rd edition: The art of scientific
-     * computing}, author       = {Press, W. H.}, journal      = {Cambridge
-     * university press}, year         = {2007}
+     * @book{Press2007,
+     *   title   = {Numerical recipes 3rd edition: The art of scientific
+     *              computing},
+     *   author  = {Press, W. H.},
+     *   journal = {Cambridge university press},
+     *   year    = {2007}
      * }
      * @endcode
      *
@@ -2986,26 +2996,31 @@ namespace internal
      * symmetric tensor using the Jacobi algorithm.
      * The specialized algorithm implemented here is given in
      * @code{.bib}
-     * @Article{Kopp2008,
-     *   title        = {Efficient numerical diagonalization of hermitian 3x3
-     * matrices}, author       = {Kopp, J.}, journal      = {International
-     * Journal of Modern Physics C}, year         = {2008}, volume       = {19},
-     *   number       = {3},
-     *   pages        = {523--548},
-     *   doi          = {10.1142/S0129183108012303},
-     *   eprinttype   = {arXiv},
-     *   eprint       = {physics/0610206v3},
-     *   eprintclass  = {physics.comp-ph},
-     *   url          =
+     * @article{Kopp2008,
+     *   title       = {Efficient numerical diagonalization of hermitian 3x3
+     *                  matrices},
+     *   author      = {Kopp, J.},
+     *   journal     = {International Journal of Modern Physics C},
+     *   year        = {2008},
+     *   volume      = {19},
+     *   number      = {3},
+     *   pages       = {523--548},
+     *   doi         = {10.1142/S0129183108012303},
+     *   eprinttype  = {arXiv},
+     *   eprint      = {physics/0610206v3},
+     *   eprintclass = {physics.comp-ph},
+     *   url         =
      * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
      * }
      * @endcode
      * and is based off of the generic algorithm presented in section 11.4.3 of
      * @code{.bib}
-     * @Book{Press2007,
-     *   title        = {Numerical recipes 3rd edition: The art of scientific
-     * computing}, author       = {Press, W. H.}, journal      = {Cambridge
-     * university press}, year         = {2007}
+     * @book{Press2007,
+     *   title   = {Numerical recipes 3rd edition: The art of scientific
+     *              computing},
+     *   author  = {Press, W. H.},
+     *   journal = {Cambridge university press},
+     *   year    = {2007}
      * }
      * @endcode
      *
@@ -3052,17 +3067,20 @@ namespace internal
      * method falls back to ql_implicit_shifts. The specialized algorithm
      * implemented here is given in
      * @code{.bib}
-     * @Article{Kopp2008,
-     *   title        = {Efficient numerical diagonalization of hermitian 3x3
-     * matrices}, author       = {Kopp, J.}, journal      = {International
-     * Journal of Modern Physics C}, year         = {2008}, volume       = {19},
-     *   number       = {3},
-     *   pages        = {523--548},
-     *   doi          = {10.1142/S0129183108012303},
-     *   eprinttype   = {arXiv},
-     *   eprint       = {physics/0610206v3},
-     *   eprintclass  = {physics.comp-ph},
-     *   url          =
+     * @article{Kopp2008,
+     *   title       = {Efficient numerical diagonalization of hermitian 3x3
+     *                  matrices},
+     *   author      = {Kopp, J.},
+     *   journal     = {International Journal of Modern Physics C},
+     *   year        = {2008},
+     *   volume      = {19},
+     *   number      = {3},
+     *   pages       = {523--548},
+     *   doi         = {10.1142/S0129183108012303},
+     *   eprinttype  = {arXiv},
+     *   eprint      = {physics/0610206v3},
+     *   eprintclass = {physics.comp-ph},
+     *   url         =
      * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
      * }
      * @endcode
@@ -3113,15 +3131,20 @@ namespace internal
  * The specialized algorithms utilized in computing the eigenvectors are
  * presented in
  * @code{.bib}
- * @Article{Kopp2008,
- *   title        = {Efficient numerical diagonalization of hermitian 3x3
- * matrices}, author       = {Kopp, J.}, journal      = {International Journal
- * of Modern Physics C}, year         = {2008}, volume       = {19}, number =
- * {3}, pages        = {523--548}, doi          = {10.1142/S0129183108012303},
- *   eprinttype   = {arXiv},
- *   eprint       = {physics/0610206v3},
- *   eprintclass  = {physics.comp-ph},
- *   url          =
+ * @article{Kopp2008,
+ *   title       = {Efficient numerical diagonalization of hermitian 3x3
+ *                  matrices},
+ *   author      = {Kopp, J.},
+ *   journal     = {International Journal of Modern Physics C},
+ *   year        = {2008},
+ *   volume      = {19},
+ *   number      = {3},
+ *   pages       = {523--548},
+ *   doi         = {10.1142/S0129183108012303},
+ *   eprinttype  = {arXiv},
+ *   eprint      = {physics/0610206v3},
+ *   eprintclass = {physics.comp-ph},
+ *   url         =
  * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
  * }
  * @endcode
@@ -3168,15 +3191,20 @@ enum struct SymmetricTensorEigenvectorMethod
  * The specialized algorithms utilized in computing the eigenvectors are
  * presented in
  * @code{.bib}
- * @Article{Kopp2008,
- *   title        = {Efficient numerical diagonalization of hermitian 3x3
- * matrices}, author       = {Kopp, J.}, journal      = {International Journal
- * of Modern Physics C}, year         = {2008}, volume       = {19}, number =
- * {3}, pages        = {523--548}, doi          = {10.1142/S0129183108012303},
- *   eprinttype   = {arXiv},
- *   eprint       = {physics/0610206v3},
- *   eprintclass  = {physics.comp-ph},
- *   url          =
+ * @article{Kopp2008,
+ *   title       = {Efficient numerical diagonalization of hermitian 3x3
+ *                  matrices},
+ *   author      = {Kopp, J.},
+ *   journal     = {International Journal of Modern Physics C},
+ *   year        = {2008},
+ *   volume      = {19},
+ *   number      = {3},
+ *   pages       = {523--548},
+ *   doi         = {10.1142/S0129183108012303},
+ *   eprinttype  = {arXiv},
+ *   eprint      = {physics/0610206v3},
+ *   eprintclass = {physics.comp-ph},
+ *   url         =
  * {https://www.mpi-hd.mpg.de/personalhomes/globes/3x3/index.html}
  * }
  * @endcode
index 55e66f67201e0ec328445d8485837aee5c73f974..b5a74e3ac9997d344646557dee0c8db8706ae16d 100644 (file)
@@ -141,34 +141,43 @@ DEAL_II_NAMESPACE_OPEN
  *
  * When using this class, please cite
  * @code{.bib}
- * @Article{Davydov2017,
- *  author    = {Denis Davydov and Tymofiy Gerasimov and Jean-Paul Pelteret and
- * Paul Steinmann}, title     = {Convergence study of the h-adaptive PUM and the
- * hp-adaptive FEM applied to eigenvalue problems in quantum mechanics}, journal
- * = {Advanced Modeling and Simulation in Engineering Sciences}, year      =
- * {2017}, volume    = {4}, number    = {1}, pages     = {7}, month     = {Dec},
- *  issn      = {2213-7467},
- *  day       = {12},
- *  doi       = {10.1186/s40323-017-0093-0},
- *  url       = {https://doi.org/10.1186/s40323-017-0093-0},
+ * @article{Davydov2017,
+ *   author  = {Denis Davydov and Tymofiy Gerasimov and Jean-Paul Pelteret and
+ *              Paul Steinmann},
+ *   title   = {Convergence study of the h-adaptive PUM and the hp-adaptive FEM
+ *              applied to eigenvalue problems in quantum mechanics},
+ *   journal = {Advanced Modeling and Simulation in Engineering Sciences},
+ *   year    = {2017},
+ *   volume  = {4},
+ *   number  = {1},
+ *   pages   = {7},
+ *   month   = {Dec},
+ *   issn    = {2213-7467},
+ *   day     = {12},
+ *   doi     = {10.1186/s40323-017-0093-0},
+ *   url     = {https://doi.org/10.1186/s40323-017-0093-0},
  * }
  * @endcode
  * The PUM was introduced in
  * @code{.bib}
- * @Article{Melenk1996,
- *   Title                    = {The partition of unity finite element method:
- * Basic theory and applications }, Author                   = {Melenk, J.M. and
- * Babu\v{s}ka, I.}, Journal                  = {Computer Methods in Applied
- * Mechanics and Engineering}, Year                     = {1996}, Number =
- * {1--4}, Pages                    = {289 -- 314}, Volume                   =
- * {139},
+ * @article{Melenk1996,
+ *   title   = {The partition of unity finite element method: Basic theory and
+ *              applications},
+ *   author  = {Melenk, J.M. and Babu\v{s}ka, I.},
+ *   journal = {Computer Methods in Applied Mechanics and Engineering},
+ *   year    = {1996},
+ *   number  = {1--4},
+ *   pages   = {289 -- 314},
+ *   volume  = {139},
  * }
- * @Article{Babuska1997,
- *   Title                    = {The partition of unity method},
- *   Author                   = {Babu\v{s}ka, I. and Melenk, J. M.},
- *   Journal                  = {International Journal for Numerical Methods in
- * Engineering}, Year                     = {1997}, Number                   =
- * {4}, Pages                    = {727--758}, Volume                   = {40},
+ * @article{Babuska1997,
+ *   title   = {The partition of unity method},
+ *   author  = {Babu\v{s}ka, I. and Melenk, J. M.},
+ *   journal = {International Journal for Numerical Methods in Engineering},
+ *   year    = {1997},
+ *   number  = {4},
+ *   pages   = {727--758},
+ *   volume  = {40},
  * }
  * @endcode
  *
index ffa2b79e4939f5bc7a52322c6bf57aa717599976..3d2853e577d5242c45a223bb91b1c25374b7ee76 100644 (file)
@@ -255,12 +255,14 @@ DEAL_II_NAMESPACE_OPEN
  * and has the following complete reference:
  * @code{.bib}
  * @article{park2003p,
- *   title =     {P 1-nonconforming quadrilateral finite element methods for
- * second-order elliptic problems}, author =    {Park, Chunjae and Sheen,
- * Dongwoo}, journal =   {SIAM Journal on Numerical Analysis}, volume =    {41},
- *   number =    {2},
- *   pages =     {624--640},
- *   year =      {2003},
+ *   title     = {P1-nonconforming quadrilateral finite element methods for
+ *                second-order elliptic problems},
+ *   author    = {Park, Chunjae and Sheen, Dongwoo},
+ *   journal   = {SIAM Journal on Numerical Analysis},
+ *   volume    = {41},
+ *   number    = {2},
+ *   pages     = {624--640},
+ *   year      = {2003},
  *   publisher = {SIAM}
  * }
  * @endcode
index f21dbd2799bc1be69879dc942bfd01d50e124863..cf895e8069bc186f15caaac4ef279c5cee6e4c47 100644 (file)
@@ -921,13 +921,13 @@ private:
  *
  * For details on the algorithm, see section 5.1 of
  * @code{.bib}
- * @Book{Varga2009,
- *   Title       = {Matrix iterative analysis},
- *   Author      = {Varga, R. S.},
- *   Publisher   = {Springer},
- *   Address     = {Berlin},
- *   Edition     = {2nd},
- *   Year        = {2009},
+ * @book{Varga2009,
+ *   Title     = {Matrix iterative analysis},
+ *   Author    = {Varga, R. S.},
+ *   Publisher = {Springer},
+ *   Address   = {Berlin},
+ *   Edition   = {2nd},
+ *   Year      = {2009},
  * }
  * @endcode
  *
index c6ce72361cc7b7f40527145f705e3430d4c54fc5..088148727a614ff63f403a1d43cae7a05dd863f7 100644 (file)
@@ -115,12 +115,15 @@ namespace Utilities
      *
      * This function implements the algorithm from
      * @code{.bib}
-     * @Article{Zhou2006,
-     *  Title     = {Self-consistent-field Calculations Using Chebyshev-filtered
-     * Subspace Iteration}, Author    = {Zhou, Yunkai and Saad, Yousef and
-     * Tiago, Murilo L. and Chelikowsky, James R.}, Journal   = {Journal of
-     * Computational Physics}, Year      = {2006}, Volume    = {219}, Pages =
-     * {172--184},
+     * @article{Zhou2006,
+     *   Title   = {Self-consistent-field Calculations Using Chebyshev-filtered
+     *              Subspace Iteration},
+     *   Author  = {Zhou, Yunkai and Saad, Yousef and Tiago, Murilo L. and
+     *              Chelikowsky, James R.},
+     *   Journal = {Journal of Computational Physics},
+     *   Year    = {2006},
+     *   Volume  = {219},
+     *   Pages   = {172--184},
      * }
      * @endcode
      *
@@ -173,12 +176,14 @@ namespace Utilities
      * This function implements the algorithm (with a minor fix of sign of
      * $\sigma_1$) from
      * @code{.bib}
-     * @Article{Zhou2014,
-     *  Title     = {Chebyshev-filtered subspace iteration method free of sparse
-     * diagonalization for solving the Kohn--Sham equation}, Author    = {Zhou,
-     * Yunkai and Chelikowsky, James R and Saad, Yousef}, Journal   = {Journal
-     * of Computational Physics}, Year      = {2014}, Volume    = {274}, Pages
-     * = {770--782},
+     * @article{Zhou2014,
+     *   Title   = {Chebyshev-filtered subspace iteration method free of sparse
+     *              diagonalization for solving the Kohn--Sham equation},
+     *   Author  = {Zhou, Yunkai and Chelikowsky, James R and Saad, Yousef},
+     *   Journal = {Journal of Computational Physics},
+     *   Year    = {2014},
+     *   Volume  = {274},
+     *   Pages   = {770--782},
      * }
      * @endcode
      *
index 7737b9b3aa2d59898cf63dede413adce059d7b2d..ecb9786ffef45a753a68e905617ac18f6a47b89b 100644 (file)
@@ -81,14 +81,15 @@ namespace hp
  * The full reference for the paper in which this error estimator is defined
  * is as follows:
  * @code{.bib}
- * @Article{KGZB83,
- *   author =       {Kelly, D. W. and {De S. R. Gago}, J. P. and Zienkiewicz, O.
- * C. and Babu\v{s}ka, I.}, title =        {A posteriori error analysis and
- * adaptive processes in the finite element method: Part {I}--Error Analysis},
- *   journal =      {Int. J. Num. Meth. Engrg.},
- *   year =         {1983},
- *   volume =       {19},
- *   pages =        {1593--1619}
+ * @article{KGZB83,
+ *   author  = {Kelly, D. W. and {De S. R. Gago}, J. P. and Zienkiewicz, O. C.
+ *              and Babu\v{s}ka, I.},
+ *   title   = {A posteriori error analysis and adaptive processes in the
+ *              finite element method: Part {I}--Error Analysis},
+ *   journal = {Int. J. Num. Meth. Engrg.},
+ *   year    = {1983},
+ *   volume  = {19},
+ *   pages   = {1593--1619}
  * }
  * @endcode
  *
index 9bc7371cf31545b4af94e3de3f130425aeae2f85..610ecd57631f85868a90df85846fb9462368acb4 100644 (file)
@@ -248,24 +248,29 @@ namespace Physics
      * Some useful references that show how this notation works include, amongst
      * others,
      * @code{.bib}
-     * @Article{Nagel2016,
-     *   author    = {Nagel, T. and G{\"o}rke, U-J. and Moerman, K. and Kolditz,
-     * O.}, title     = {On advantages of the Kelvin mapping in finite element
-     * implementations of deformation processes}, journal   = {Environmental
-     * Earth Sciences}, year      = {2016}, volume    = {75}, number    = {11},
-     *   pages     = {937}
+     * @article{Nagel2016,
+     *   author  = {Nagel, T. and G{\"o}rke, U-J. and Moerman, K. and Kolditz,
+     *              O.},
+     *   title   = {On advantages of the Kelvin mapping in finite element
+     *              implementations of deformation processes},
+     *   journal = {Environmental Earth Sciences},
+     *   year    = {2016},
+     *   volume  = {75},
+     *   number  = {11},
+     *   pages   = {937}
      * }
      * @endcode
      * and
      * @code{.bib}
-     * @Article{Dellinger1998,
-     *   author        = {Dellinger, J. and Vasicek, D. and Sondergeld, C.},
-     *   title         = {Kelvin notation for stabilizing elastic-constant
-     * inversion}, journal       = {Revue de l'Institut Fran{\c{c}}ais du
-     * P{\'e}trole}, year          = {1998}, volume        = {53}, number = {5},
-     *   pages         = {709--719},
-     *   url           =
-     * {http://sepwww.stanford.edu/oldsep/joe/Reprints/8IWSA.pdf},
+     * @article{Dellinger1998,
+     *   author  = {Dellinger, J. and Vasicek, D. and Sondergeld, C.},
+     *   title   = {Kelvin notation for stabilizing elastic-constant inversion},
+     *   journal = {Revue de l'Institut Fran{\c{c}}ais du P{\'e}trole},
+     *   year    = {1998},
+     *   volume  = {53},
+     *   number  = {5},
+     *   pages   = {709--719},
+     *   url     = {http://sepwww.stanford.edu/oldsep/joe/Reprints/8IWSA.pdf},
      * }
      * @endcode
      * as well as the online reference found on

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