From: Marc Fehling Date: Thu, 23 Jun 2022 09:28:59 +0000 (+0200) Subject: Update references for Trilinos, PETSc, Mumps, Ginkgo, GSL, CGAL, Gmesh, hdf5. X-Git-Url: https://gitweb.dealii.org/cgi-bin/gitweb.cgi?a=commitdiff_plain;h=04b06d2cd854577413bb845f51708e3d917376e2;p=release-papers.git Update references for Trilinos, PETSc, Mumps, Ginkgo, GSL, CGAL, Gmesh, hdf5. --- diff --git a/9.4/paper.bib b/9.4/paper.bib index 3ba3cde..cb2c6f0 100644 --- a/9.4/paper.bib +++ b/9.4/paper.bib @@ -496,38 +496,41 @@ Collection of deal.II Manifold Wrappers for the OpenCASCADE Library}}, volume = 31, pages = {397--423}} +See: https://trilinos.github.io/cite.html @Misc{trilinos-web-page, - Author = "M. A. Heroux and others", - Title = "{Trilinos} web page", - Note = "\url{https://trilinos.org}", - Year = "2021"} - -# From http://www.mcs.anl.gov/petsc/documentation/referencing.html -@Misc{petsc-web-page, - author = {S. Balay and S. Abhyankar and M.~F. Adams and J. Brown and P. Brune - and K. Buschelman and L. Dalcin and V. Eijkhout and W.~D. Gropp - and D. Karpeyev and D. Kaushik and M.~G. Knepley - and D. May and L. Curfman McInnes and R. Mills and T. Munson - and K. Rupp and P. Sanan B.~F. Smith and S. Zampini - and H. Zhang and H. Zhang}, - title = {{PETS}c {W}eb page}, - url = {https://www.mcs.anl.gov/petsc}, - howpublished = {\url{https://www.mcs.anl.gov/petsc}}, - year = {2021} -} - -@TechReport{petsc-user-ref, - author = {S. Balay and S. Abhyankar and M.~F. Adams and J. Brown and P. Brune - and K. Buschelman and L. Dalcin and V. Eijkhout and W.~D. Gropp - and D. Karpeyev and D. Kaushik and M.~G. Knepley - and D. May and L. Curfman McInnes and R. Mills and T. Munson - and K. Rupp and P. Sanan B.~F. Smith and S. Zampini - and H. Zhang and H. Zhang}, - title = {{PETS}c Users Manual}, + title = {The {T}rilinos {P}roject {W}ebsite}, + author = {The {T}rilinos {P}roject {T}eam}, + year = {2022}, + url = {https://trilinos.github.io} +} + +See: https://petsc.org/release/#citing-petsc +@misc{petsc-web-page, + author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown + and Peter Brune and Kris Buschelman and Emil~M. Constantinescu and Lisandro Dalcin and Alp Dener + and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet + and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger + and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson + and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith + and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang}, + title = {{PETS}c {W}eb page}, + url = {https://petsc.org/}, + howpublished = {\url{https://petsc.org/}}, + year = {2022}, +} + +@techreport{petsc-user-ref, + author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown + and Peter Brune and Kris Buschelman and Emil Constantinescu and Lisandro Dalcin and Alp Dener + and Victor Eijkhout and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet + and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger + and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson + and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith + and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang}, + title = {{PETSc/TAO} Users Manual}, institution = {Argonne National Laboratory}, - year = 2021, - number = {ANL-95/11 - Revision 3.15}, - url = {https://www.mcs.anl.gov/petsc} + number = {ANL-21/39 - Revision 3.17}, + year = {2022}, } @@ -574,6 +577,7 @@ See: https://p4est.github.io/cite.html publisher = {SIAM, Philadelphia}, year = 1998} +See: http://mumps.enseeiht.fr/index.php?page=bibtex @Misc{mumps-web-page, key = {MUMPS}, title = {{MUMPS: a MUltifrontal Massively Parallel sparse direct Solver}}, @@ -610,6 +614,32 @@ See: https://p4est.github.io/cite.html pages = {136-156} } +@article{MUMPS:3, + title = {{Performance and Scalability of the Block Low-Rank Multifrontal + Factorization on Multicore Architectures}}, + author = {P. R. Amestoy and A. Buttari and J.-Y. L'Excellent and T. Mary}, + journal = {ACM Transactions on Mathematical Software}, + volume = {45}, + issue = {1}, + pages = {2:1--2:26}, + year={2019}, +} + +See: https://ginkgo-project.github.io/ginkgo/doc/develop/citing_ginkgo.html +@article{Anzt2022, + doi = {10.1145/3480935}, + url = {https://doi.org/10.1145/3480935}, + year = {2022}, + month = mar, + publisher = {Association for Computing Machinery ({ACM})}, + volume = {48}, + number = {1}, + pages = {1--33}, + author = {Hartwig Anzt and Terry Cojean and Goran Flegar and Fritz G\"{o}bel and Thomas Gr\"{u}tzmacher and Pratik Nayak and Tobias Ribizel and Yuhsiang Mike Tsai and Enrique S. Quintana-Ort{\'{\i}}}, + title = {Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing}, + journal = {{ACM} Transactions on Mathematical Software} +} + @Misc{ginkgo-web-page, key = {ginkgo}, title = {Ginkgo: high-performance linear algebra library for manycore @@ -633,10 +663,11 @@ See: https://p4est.github.io/cite.html title = {{SymEngine: fast symbolic manipulation library, written in C++}}, note = {\url{https://symengine.org/}}} +See: http://portal.hdfgroup.org/display/knowledge/How+do+I+properly+cite+HDF5+in+a+paper @Misc{hdf5, author = {{The HDF Group}}, title = "{Hierarchical Data Format, version 5}", - year = {1997-2018}, + year = {2022}, note = {\url{http://www.hdfgroup.org/HDF5/}} } @@ -771,11 +802,20 @@ year = {2009} Year = {2017}, } -@misc{gsl2016, - author = {Galassi, M and Davies, J and Theiler, J and Gough, B and Jungman, G and Alken, P and Booth, M and Rossi, F and Ulerich, R}, - title = {GNU Scientific Library Reference Manual (Edition 2.3)}, - journal = {Library available online at http://www. gnu. org/software/gsl}, - year = {2016} +See: https://www.gnu.org/software/gsl/#moreinfo +@book{Galassi2009, + author = {Galassi, M. and Davies, Jim and Theiler, James and Gough, B. and Jungman, G. and Booth, Michael and Rossi, F.}, + title = {GNU Scientific Library Reference Manual}, + year = {2009}, + isbn = {0954612078}, + publisher = {Network Theory Ltd.}, + edition = {3rd} +} + +@Misc{gsl-web-page, + key = {GSL}, + title = {{GSL: GNU Scientific Library}}, + note = {\url{http://www.gnu.org/software/gsl}} } @misc{nanoflann, @@ -890,8 +930,9 @@ year = {2009} Volume = {121}, Year = {2018}} +See: https://gmsh.info/ @article{geuzaine2009gmsh, - title={Gmsh: A 3-D finite element mesh generator with built-in pre-and post-processing facilities}, + title={Gmsh: A {3-D} finite element mesh generator with built-in pre-and post-processing facilities}, author={Geuzaine, Christophe and Remacle, Jean-Fran{\c{c}}ois}, journal={International journal for numerical methods in engineering}, volume={79}, @@ -1340,6 +1381,7 @@ doi = {10.1504/IJCSE.2009.029164} doi={10.1145/3458817.3476171} } +See: https://doc.cgal.org/latest/Manual/how_to_cite_cgal.html @book{ cgal , title = "{CGAL} User and Reference Manual" , author = "{The CGAL Project}" diff --git a/9.4/paper.tex b/9.4/paper.tex index eefaf19..a5f9116 100644 --- a/9.4/paper.tex +++ b/9.4/paper.tex @@ -1094,11 +1094,11 @@ following: \item cuSOLVER \cite{cusolver} \item cuSPARSE \cite{cusparse} \item Gmsh \cite{geuzaine2009gmsh} - \item GSL \cite{gsl2016} - \item Ginkgo \cite{ginkgo-web-page} + \item GSL \cite{Galassi2009,gsl-web-page} + \item Ginkgo \cite{Anzt2022,ginkgo-web-page} \item HDF5 \cite{hdf5} \item METIS \cite{karypis1998fast} - \item MUMPS \cite{ADE00,MUMPS:1,MUMPS:2,mumps-web-page} + \item MUMPS \cite{ADE00,MUMPS:1,MUMPS:2,MUMPS:3,mumps-web-page} \item muparser \cite{muparser-web-page} \item OpenCASCADE \cite{opencascade-web-page} \item p4est \cite{p4est,burstedde2020parallel}