From: bangerth Date: Thu, 3 Sep 2009 19:16:08 +0000 (+0000) Subject: Avoid a problem with Trilinos 10 not having a certain header file. X-Git-Url: https://gitweb.dealii.org/cgi-bin/gitweb.cgi?a=commitdiff_plain;h=263b3c81717889d78ef7ce0c8a6b2a8a7e348ad6;p=dealii-svn.git Avoid a problem with Trilinos 10 not having a certain header file. git-svn-id: https://svn.dealii.org/branches/releases/Branch-6-2@19380 0785d39b-7218-0410-832d-ea1e28bc413d --- diff --git a/deal.II/doc/news/6.2.1-vs-6.2.2.h b/deal.II/doc/news/6.2.1-vs-6.2.2.h index b710347b07..c17acfb81d 100644 --- a/deal.II/doc/news/6.2.1-vs-6.2.2.h +++ b/deal.II/doc/news/6.2.1-vs-6.2.2.h @@ -40,6 +40,15 @@ deal.II version 6.2.0 and version 6.2.1: the other processors did not also match exactly. This is now fixed.

+ +
  • +

    + Fixed: Two of the Trilinos interface files of deal.II included Trilinos header + files that have been removed between Trilinos 9.0 and Trilinos 10.0. The + result is that deal.II could not be compiled against Trilinos 10 any + more. This is now fixed. +

    +
    • diff --git a/deal.II/lac/source/trilinos_precondition_block.cc b/deal.II/lac/source/trilinos_precondition_block.cc index c3700b545e..50013e80cb 100755 --- a/deal.II/lac/source/trilinos_precondition_block.cc +++ b/deal.II/lac/source/trilinos_precondition_block.cc @@ -2,7 +2,7 @@ // $Id$ // Version: $Name$ // -// Copyright (C) 2008 by the deal.II authors +// Copyright (C) 2008, 2009 by the deal.II authors // // This file is subject to QPL and may not be distributed // without copyright and license information. Please refer @@ -23,7 +23,6 @@ #include #include -#include #include #include #include @@ -63,26 +62,26 @@ namespace TrilinosWrappers // Epetra operator // (Thyra wrapper around the // matrix). - Teuchos::RCP > tmpM = + Teuchos::RCP > tmpM = Thyra::epetraLinearOp(Teuchos::rcp(&input_M.trilinos_matrix(), false)); - Teuchos::RCP > M + Teuchos::RCP > M = Teuchos::rcp(new Thyra::DefaultLinearOpSource(tmpM), true); //Thyra::ConstLinearOperator opM = tmpM; // Create a Thyra version of // the preconditioner. - Teuchos::RCP > tmpP = + Teuchos::RCP > tmpP = Thyra::epetraLinearOp(Teuchos::rcp(const_cast(input_P), - false), + false), Thyra::NOTRANS, Thyra::EPETRA_OP_APPLY_APPLY_INVERSE, Thyra::EPETRA_OP_ADJOINT_SUPPORTED); - + //Thyra::ConstLinearOperator opPM = tmpP; - Teuchos::RCP > PM = + Teuchos::RCP > PM = Teuchos::rcp (new Thyra::DefaultPreconditioner(), true); { @@ -94,12 +93,12 @@ namespace TrilinosWrappers } // Set up the solver. - Teuchos::RCP aztecParams + Teuchos::RCP aztecParams = Teuchos::rcp(new Teuchos::ParameterList("aztecOOFSolverFactory"), true); - aztecParams->sublist("Forward Solve").set("Max Iterations", + aztecParams->sublist("Forward Solve").set("Max Iterations", (int)n_iterations); - aztecParams->sublist("Forward Solve").set("Tolerance", + aztecParams->sublist("Forward Solve").set("Tolerance", solve_tolerance); // aztecOO solver settings @@ -113,7 +112,7 @@ namespace TrilinosWrappers aztecParams->sublist("Forward Solve") .sublist("AztecOO Settings").set("Aztec Solver", "GMRES"); aztecParams->sublist("Forward Solve") - .sublist("AztecOO Settings").set("Size of Krylov Subspace", + .sublist("AztecOO Settings").set("Size of Krylov Subspace", (int)n_iterations); } @@ -141,7 +140,7 @@ namespace TrilinosWrappers aztecLowsFactory->setParameterList(aztecParams); - Teuchos::RCP > rcpAztec + Teuchos::RCP > rcpAztec = aztecLowsFactory->createOp(); // Does not work like @@ -152,20 +151,20 @@ namespace TrilinosWrappers // side vector, which makes // the results wrong. So try // something else... - //Meros::LinearSolveStrategy azM + //Meros::LinearSolveStrategy azM // = new Meros::AztecSolveStrategy(*(aztecParams.get())); - //Thyra::LinearOperator Minverse + //Thyra::LinearOperator Minverse // = Thyra::inverse(*aztecLowsFactory, opM); //return new Meros::InverseOperator(opM * opPM, azM); // Attach the preconditioner // to the solver. - aztecLowsFactory->initializePreconditionedOp(M, PM, &*rcpAztec, + aztecLowsFactory->initializePreconditionedOp(M, PM, &*rcpAztec, Thyra::SUPPORT_SOLVE_FORWARD_ONLY); - + // Create an inverse matrix // object and return. - Teuchos::RCP > Minverse = + Teuchos::RCP > Minverse = Teuchos::rcp(new Thyra::DefaultInverseLinearOp(rcpAztec)); return Minverse; @@ -266,7 +265,7 @@ namespace TrilinosWrappers } - void + void PreconditionStokes::initialize (const BlockSparseMatrix &system_matrix, const SparseMatrix &Mp_matrix, const AdditionalData &additional_data, @@ -296,7 +295,7 @@ namespace TrilinosWrappers { Teuchos::RCP > tmpAvp = Thyra::epetraLinearOp(Teuchos::rcp(&*Av_preconditioner.preconditioner, - false), + false), Thyra::NOTRANS, Thyra::EPETRA_OP_APPLY_APPLY_INVERSE, Thyra::EPETRA_OP_ADJOINT_SUPPORTED); @@ -305,8 +304,8 @@ namespace TrilinosWrappers // Create Mp inverse matrix. - Thyra::ConstLinearOperator Mp_inverse - = inverse_matrix(Mp_matrix, &*Mp_preconditioner.preconditioner, true, + Thyra::ConstLinearOperator Mp_inverse + = inverse_matrix(Mp_matrix, &*Mp_preconditioner.preconditioner, true, Mp_matrix.m(), additional_data.inner_solve_tolerance, additional_data.output_details); @@ -320,7 +319,7 @@ namespace TrilinosWrappers { // Create Lp inverse matrix. Lp_inverse = inverse_matrix(Lp_matrix, &*Lp_preconditioner.preconditioner, - true, Lp_matrix.m(), + true, Lp_matrix.m(), additional_data.inner_solve_tolerance, additional_data.output_details); } @@ -346,9 +345,9 @@ namespace TrilinosWrappers // Build identity matrices on // the velocity and pressure // spaces - Thyra::ConstLinearOperator Ivel + Thyra::ConstLinearOperator Ivel = Thyra::identity(Av_inverse.range()); - Thyra::ConstLinearOperator Ipress + Thyra::ConstLinearOperator Ipress = Thyra::identity(Mp_inverse.domain()); // Build zero operators. Need @@ -356,7 +355,7 @@ namespace TrilinosWrappers // velocity and one that is // velocity x pressure Thyra::ConstLinearOperator zero; - + // Build the composed Schur // complement approximation // inverse @@ -369,13 +368,13 @@ namespace TrilinosWrappers // Create discrete pressure // gradient and divergence // operators in Thyra format. - Teuchos::RCP > tmpS01 = - Thyra::epetraLinearOp(Teuchos::rcp(&system_matrix.block(0,1).trilinos_matrix(), + Teuchos::RCP > tmpS01 = + Thyra::epetraLinearOp(Teuchos::rcp(&system_matrix.block(0,1).trilinos_matrix(), false)); Thyra::ConstLinearOperator S01 = tmpS01; - Teuchos::RCP > tmpS10 = - Thyra::epetraLinearOp(Teuchos::rcp(&system_matrix.block(1,0).trilinos_matrix(), + Teuchos::RCP > tmpS10 = + Thyra::epetraLinearOp(Teuchos::rcp(&system_matrix.block(1,0).trilinos_matrix(), false)); Thyra::ConstLinearOperator S10 = tmpS10; @@ -386,7 +385,7 @@ namespace TrilinosWrappers // matrices depending on // whether we do right or left // preconditioning. - Thyra::ConstLinearOperator P1 + Thyra::ConstLinearOperator P1 = block2x2( Av_inverse, zero, zero, Ipress ); Thyra::ConstLinearOperator P2; @@ -395,14 +394,14 @@ namespace TrilinosWrappers else P2 = block2x2( Ivel, zero, (-1.0)*S10, Ipress ); - Thyra::ConstLinearOperator P3 + Thyra::ConstLinearOperator P3 = block2x2( Ivel, zero, zero, (-1.0)*Xinv ); - if (additional_data.right_preconditioning == true) - preconditioner = Teuchos::rcp (new + if (additional_data.right_preconditioning == true) + preconditioner = Teuchos::rcp (new Thyra::ConstLinearOperator(P1 * P2 * P3)); else - preconditioner = Teuchos::rcp (new + preconditioner = Teuchos::rcp (new Thyra::ConstLinearOperator(P3 * P2 * P1)); } diff --git a/deal.II/lac/source/trilinos_solver_block.cc b/deal.II/lac/source/trilinos_solver_block.cc index a9f1ed8faa..45e3162139 100644 --- a/deal.II/lac/source/trilinos_solver_block.cc +++ b/deal.II/lac/source/trilinos_solver_block.cc @@ -2,7 +2,7 @@ // $Id$ // Version: $Name$ // -// Copyright (C) 2008 by the deal.II authors +// Copyright (C) 2008, 2009 by the deal.II authors // // This file is subject to QPL and may not be distributed // without copyright and license information. Please refer @@ -34,7 +34,6 @@ #include #include #include -#include #include #include #include @@ -56,15 +55,15 @@ namespace TrilinosWrappers output_details (output_details) {} - - + + SolverBlockBase::SolverBlockBase (SolverControl &cn) : solver_name (gmres), solver_control (cn) {} - + SolverBlockBase::SolverBlockBase (SolverBlockBase::SolverBlockName solver_name, SolverControl &cn) @@ -73,12 +72,12 @@ namespace TrilinosWrappers solver_control (cn) {} - + SolverBlockBase::~SolverBlockBase () {} - + SolverControl & SolverBlockBase::control() const @@ -115,8 +114,8 @@ namespace TrilinosWrappers solve (A, tmpx, tmpb, preconditioner); x = tmpx; } - - + + void SolverBlockBase::solve (const BlockSparseMatrix &input_A, @@ -187,16 +186,16 @@ namespace TrilinosWrappers // abstract Thyra/Stratimikos // interfaces to the AztecOO // solver. - // + // // As a first step, create a // copy of the vector spaces. - std::vector > > + std::vector > > epetra_vector_spaces; for (unsigned int i=0; i > tmp_space = Thyra::create_VectorSpace( - Teuchos::rcp(&input_A.block(i,i).domain_partitioner(), + Teuchos::rcp(&input_A.block(i,i).domain_partitioner(), false)); epetra_vector_spaces.push_back(tmp_space); @@ -211,8 +210,8 @@ namespace TrilinosWrappers for (unsigned int i=0; i > - A_ij = Thyra::epetraLinearOp(Teuchos::rcp(&input_A.block(i,j).trilinos_matrix(), + Teuchos::RCP > + A_ij = Thyra::epetraLinearOp(Teuchos::rcp(&input_A.block(i,j).trilinos_matrix(), false)); tmpA->setBlock(i, j, A_ij); } @@ -232,31 +231,31 @@ namespace TrilinosWrappers Epetra_Vector *block_ptr = const_cast ((input_b.block(i).trilinos_vector())(0)); Teuchos::RCP > tmp_rhs_i - = Thyra::create_Vector(Teuchos::rcp(block_ptr, false), + = Thyra::create_Vector(Teuchos::rcp(block_ptr, false), epetra_vector_spaces[i]); const Thyra::Vector rhs_i = tmp_rhs_i; rhs.setBlock(i, rhs_i); block_ptr = (input_x.block(i).trilinos_vector())(0); Teuchos::RCP > tmp_sol_i - = Thyra::create_Vector(Teuchos::rcp(block_ptr, false), + = Thyra::create_Vector(Teuchos::rcp(block_ptr, false), epetra_vector_spaces[i]); Thyra::Vector sol_i = tmp_sol_i; sol.setBlock(i, sol_i); } - // ------- Now build a solver factory for the block problem ------- + // ------- Now build a solver factory for the block problem ------- // Set up a parameter list for // the AztecOO solver. - Teuchos::RCP aztecBlockParams + Teuchos::RCP aztecBlockParams = rcp(new Teuchos::ParameterList("AztecOO block solver parameters")); - + // Set the number of // iterations and the solver // tolerance from the solver // control object. - aztecBlockParams->sublist("Forward Solve").set("Max Iterations", + aztecBlockParams->sublist("Forward Solve").set("Max Iterations", (int)solver_control.max_steps()); aztecBlockParams->sublist("Forward Solve").set("Tolerance", solver_control.tolerance()); @@ -279,7 +278,7 @@ namespace TrilinosWrappers aztecBlockParams->sublist("Forward Solve") .sublist("AztecOO Settings").set("Aztec Solver", "GMRES"); aztecBlockParams->sublist("Forward Solve") - .sublist("AztecOO Settings").set("Size of Krylov Subspace", + .sublist("AztecOO Settings").set("Size of Krylov Subspace", (int)additional_data.gmres_restart_parameter); break; default: @@ -296,7 +295,7 @@ namespace TrilinosWrappers aztecBlockParams->sublist("Forward Solve") .sublist("AztecOO Settings").set("Output Frequency", 1); else - aztecBlockParams->sublist("VerboseObject").set("Verbosity Level", + aztecBlockParams->sublist("VerboseObject").set("Verbosity Level", "none"); // Create solve factory from @@ -307,7 +306,7 @@ namespace TrilinosWrappers aztecBlockLowsFactory->setParameterList(aztecBlockParams); - Teuchos::RCP > rcpBlockAztec + Teuchos::RCP > rcpBlockAztec = aztecBlockLowsFactory->createOp(); @@ -316,10 +315,10 @@ namespace TrilinosWrappers // Extract base operators from // block matrix A and block // preconditioner P. - Teuchos::RCP > A_ptr - = Teuchos::rcp(new Thyra::DefaultLinearOpSource(A.constPtr()), + Teuchos::RCP > A_ptr + = Teuchos::rcp(new Thyra::DefaultLinearOpSource(A.constPtr()), true); - Teuchos::RCP > P_ptr = + Teuchos::RCP > P_ptr = Teuchos::rcp (new Thyra::DefaultPreconditioner(), true); { Thyra::DefaultPreconditioner @@ -334,13 +333,13 @@ namespace TrilinosWrappers // Attach the matrix and the // preconditioner to the // solver object. - aztecBlockLowsFactory->initializePreconditionedOp(A_ptr, P_ptr, - &*rcpBlockAztec, + aztecBlockLowsFactory->initializePreconditionedOp(A_ptr, P_ptr, + &*rcpBlockAztec, Thyra::SUPPORT_SOLVE_FORWARD_ONLY); // Now do the solve. Thyra::SolveStatus - solveStatus = Thyra::solve( *rcpBlockAztec, Thyra::NOTRANS, + solveStatus = Thyra::solve( *rcpBlockAztec, Thyra::NOTRANS, *rhs.constPtr().get(), &*sol.ptr().get() ); // Extract the number of @@ -350,7 +349,7 @@ namespace TrilinosWrappers { std::string output_text = solveStatus.message; unsigned int position = output_text.find ("using "); - const std::pair tmp + const std::pair tmp = Utilities::get_integer_at_position (output_text, position+6); n_iterations = tmp.first; } @@ -367,11 +366,11 @@ namespace TrilinosWrappers solver_control.check (n_iterations, 0); } - - - + + + /* ------------------------ SolverCG -------------------------- */ SolverBlockCG::AdditionalData:: @@ -382,8 +381,8 @@ namespace TrilinosWrappers output_details (output_details) {} - - + + SolverBlockCG::SolverBlockCG (SolverControl &cn, const AdditionalData &data) : @@ -394,7 +393,7 @@ namespace TrilinosWrappers additional_data.right_preconditioning = data.right_preconditioning; additional_data.output_details = data.output_details; } - + /* ---------------------- SolverGMRES ------------------------- */ @@ -408,7 +407,7 @@ namespace TrilinosWrappers output_details (output_details) {} - + SolverBlockGMRES::SolverBlockGMRES (SolverControl &cn, const AdditionalData &data)