From: heister Date: Wed, 13 Feb 2013 15:26:53 +0000 (+0000) Subject: Always use compress() with an argument, remove unneccesary compress() calls in algori... X-Git-Url: https://gitweb.dealii.org/cgi-bin/gitweb.cgi?a=commitdiff_plain;h=75f748127af2187aea0d942b83a52f4f22d35df7;p=dealii-svn.git Always use compress() with an argument, remove unneccesary compress() calls in algorithms, do not call update_ghost_values() inside algorithms. git-svn-id: https://svn.dealii.org/trunk@28378 0785d39b-7218-0410-832d-ea1e28bc413d --- diff --git a/deal.II/source/fe/fe_tools.cc b/deal.II/source/fe/fe_tools.cc index 8707becfd3..26ed3a42fa 100644 --- a/deal.II/source/fe/fe_tools.cc +++ b/deal.II/source/fe/fe_tools.cc @@ -1417,8 +1417,8 @@ namespace FETools // be cell2 Assert (cell2 == endc2, ExcInternalError()); - u2.compress(); - touch_count.compress(); + u2.compress(VectorOperation::add); + touch_count.compress(VectorOperation::add); // if we work on parallel distributed // vectors, we have to ensure, that we only @@ -1439,12 +1439,9 @@ namespace FETools } // finish the work on parallel vectors - u2.compress(); + u2.compress(VectorOperation::insert); // Apply hanging node constraints. constraints.distribute(u2); - - // and finally update ghost values - u2.update_ghost_values(); } @@ -1522,10 +1519,8 @@ namespace FETools } // if we work on a parallel PETSc vector - // we have to finish the work and - // update ghost values - u1_interpolated.compress(); - u1_interpolated.update_ghost_values(); + // we have to finish the work + u1_interpolated.compress(VectorOperation::insert); } @@ -1625,10 +1620,8 @@ namespace FETools }; // if we work on a parallel PETSc vector - // we have to finish the work and - // update ghost values - u1_interpolated.compress(); - u1_interpolated.update_ghost_values(); + // we have to finish the work + u1_interpolated.compress(VectorOperation::insert); } @@ -1771,8 +1764,7 @@ namespace FETools // if we work on a parallel PETSc vector // we have to finish the work and // update ghost values - u1_difference.compress(); - u1_difference.update_ghost_values(); + u1_difference.compress(VectorOperation::insert); } @@ -1796,12 +1788,6 @@ namespace FETools { back_interpolate(dof1, constraints1, u1, dof2, constraints2, u1_difference); u1_difference.sadd(-1, u1); - - // if we work on a parallel PETSc vector - // we have to finish the work and - // update ghost values - u1_difference.compress(); - u1_difference.update_ghost_values(); } } diff --git a/deal.II/source/lac/constraint_matrix.cc b/deal.II/source/lac/constraint_matrix.cc index a03a479149..bba9512788 100644 --- a/deal.II/source/lac/constraint_matrix.cc +++ b/deal.II/source/lac/constraint_matrix.cc @@ -2106,7 +2106,7 @@ ConstraintMatrix::distribute (PETScWrappers::MPI::Vector &vec) const vec(it->line) = new_value; } - vec.compress (); + vec.compress (VectorOperation::insert); } diff --git a/deal.II/source/numerics/matrix_tools.cc b/deal.II/source/numerics/matrix_tools.cc index d48a26831c..2282d6cd41 100644 --- a/deal.II/source/numerics/matrix_tools.cc +++ b/deal.II/source/numerics/matrix_tools.cc @@ -2384,13 +2384,6 @@ namespace MatrixTools Assert (local_range == solution.local_range(), ExcInternalError()); - - // we have to read and write from this - // matrix (in this order). this will only - // work if we compress the matrix first, - // done here - matrix.compress (); - // determine the first nonzero diagonal // entry from within the part of the // matrix that we can see. if we can't @@ -2427,23 +2420,6 @@ namespace MatrixTools // treated in the other functions. matrix.clear_rows (constrained_rows, average_nonzero_diagonal_entry); - // the next thing is to set right hand - // side to the wanted value. there's one - // drawback: if we write to individual - // vector elements, then we have to do - // that on all processors. however, some - // processors may not need to set - // anything because their chunk of - // matrix/rhs do not contain any boundary - // nodes. therefore, rather than using - // individual calls, we use one call for - // all elements, thereby making sure that - // all processors call this function, - // even if some only have an empty set of - // elements to set - right_hand_side.compress (); - solution.compress (); - std::vector indices; std::vector solution_values; for (std::map::const_iterator @@ -2467,8 +2443,8 @@ namespace MatrixTools // clean up matrix.compress (); - solution.compress (); - right_hand_side.compress (); + solution.compress (VectorOperation::insert); + right_hand_side.compress (VectorOperation::insert); } } } @@ -2656,27 +2632,6 @@ namespace MatrixTools // matrix classes in deal.II. matrix.clear_rows (constrained_rows, average_nonzero_diagonal_entry); - // the next thing is to set right - // hand side to the wanted - // value. there's one drawback: - // if we write to individual - // vector elements, then we have - // to do that on all - // processors. however, some - // processors may not need to set - // anything because their chunk - // of matrix/rhs do not contain - // any boundary nodes. therefore, - // rather than using individual - // calls, we use one call for all - // elements, thereby making sure - // that all processors call this - // function, even if some only - // have an empty set of elements - // to set - right_hand_side.compress (); - solution.compress (); - std::vector indices; std::vector solution_values; for (std::map::const_iterator @@ -2700,8 +2655,8 @@ namespace MatrixTools // clean up matrix.compress (); - solution.compress (); - right_hand_side.compress (); + solution.compress (VectorOperation::insert); + right_hand_side.compress (VectorOperation::insert); }