]>
https://gitweb.dealii.org/ - dealii-svn.git/log
maier [Sun, 31 Mar 2013 20:37:59 +0000 (20:37 +0000)]
CMake: Add a schortcut for configuration:
- WITH_* gets replaced by DEAL_II_WITH_*
- COMPONENT_* gets replaced by DEAL_II_COMPONENT_*
- Just providing a component name gets replaced by DEAL_II_COMPONENT_*
git-svn-id: https://svn.dealii.org/trunk@29121
0785d39b -7218-0410-832d-
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frohne [Sun, 31 Mar 2013 00:56:52 +0000 (00:56 +0000)]
fixed stopping rule in solve_newton ()
git-svn-id: https://svn.dealii.org/trunk@29120
0785d39b -7218-0410-832d-
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maier [Sat, 30 Mar 2013 17:20:14 +0000 (17:20 +0000)]
Add -ip to the optimized compiler flags for icc
git-svn-id: https://svn.dealii.org/trunk@29119
0785d39b -7218-0410-832d-
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maier [Sat, 30 Mar 2013 17:10:00 +0000 (17:10 +0000)]
CMake: Add crosscompilation support
git-svn-id: https://svn.dealii.org/trunk@29118
0785d39b -7218-0410-832d-
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young [Sat, 30 Mar 2013 14:14:22 +0000 (14:14 +0000)]
Kill off all instances of SLEPC_ARCH in configure. There is no such thing - it is always PETSC_ARCH.
git-svn-id: https://svn.dealii.org/trunk@29117
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maier [Sat, 30 Mar 2013 12:53:53 +0000 (12:53 +0000)]
Well, no. We don't support libnetcdf_c++4. Major porting required
git-svn-id: https://svn.dealii.org/trunk@29116
0785d39b -7218-0410-832d-
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young [Sat, 30 Mar 2013 12:45:01 +0000 (12:45 +0000)]
Corrections to readme and minor extension to petsc.html.
git-svn-id: https://svn.dealii.org/trunk@29115
0785d39b -7218-0410-832d-
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young [Sat, 30 Mar 2013 12:44:06 +0000 (12:44 +0000)]
Instructions on installing slepc.
git-svn-id: https://svn.dealii.org/trunk@29114
0785d39b -7218-0410-832d-
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maier [Sat, 30 Mar 2013 12:37:20 +0000 (12:37 +0000)]
CMake: Also find netcdf_c++4
git-svn-id: https://svn.dealii.org/trunk@29113
0785d39b -7218-0410-832d-
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maier [Sat, 30 Mar 2013 12:25:43 +0000 (12:25 +0000)]
CMake: Cleanup
git-svn-id: https://svn.dealii.org/trunk@29112
0785d39b -7218-0410-832d-
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heister [Fri, 29 Mar 2013 20:30:38 +0000 (20:30 +0000)]
fix step-42
git-svn-id: https://svn.dealii.org/trunk@29111
0785d39b -7218-0410-832d-
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maier [Fri, 29 Mar 2013 07:43:25 +0000 (07:43 +0000)]
CMake: Bugfix. Use relative paths in deal.IIConfig.cmake
git-svn-id: https://svn.dealii.org/trunk@29110
0785d39b -7218-0410-832d-
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maier [Fri, 29 Mar 2013 00:54:45 +0000 (00:54 +0000)]
CMake: Bugfixes
git-svn-id: https://svn.dealii.org/trunk@29109
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 23:41:37 +0000 (23:41 +0000)]
CMake: Several bugfixes for CPack
git-svn-id: https://svn.dealii.org/trunk@29108
0785d39b -7218-0410-832d-
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young [Thu, 28 Mar 2013 20:28:32 +0000 (20:28 +0000)]
Port over skeleton MathGL grid_out interface.
git-svn-id: https://svn.dealii.org/trunk@29106
0785d39b -7218-0410-832d-
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young [Thu, 28 Mar 2013 16:50:24 +0000 (16:50 +0000)]
Fix step-36: Use namespace dealii before calling dealii functions.
git-svn-id: https://svn.dealii.org/trunk@29104
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 16:30:27 +0000 (16:30 +0000)]
Rephrase a forgotten definition of "deal.II authors" in license.html to match readme.html
git-svn-id: https://svn.dealii.org/trunk@29103
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 16:19:05 +0000 (16:19 +0000)]
Update href
git-svn-id: https://svn.dealii.org/trunk@29102
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 16:17:07 +0000 (16:17 +0000)]
Update documentation
git-svn-id: https://svn.dealii.org/trunk@29101
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 15:48:29 +0000 (15:48 +0000)]
CMake: Add support for CPack
git-svn-id: https://svn.dealii.org/trunk@29100
0785d39b -7218-0410-832d-
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maier [Thu, 28 Mar 2013 10:17:03 +0000 (10:17 +0000)]
CMake: Cleanup
git-svn-id: https://svn.dealii.org/trunk@29099
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 22:56:35 +0000 (22:56 +0000)]
CMake: Actually include the new OBJECT targets
git-svn-id: https://svn.dealii.org/trunk@29096
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 22:54:30 +0000 (22:54 +0000)]
Merge branch branch_cmake into Mainline
This merge finalizes support for IDEs.
git-svn-id: https://svn.dealii.org/trunk@29095
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 22:52:32 +0000 (22:52 +0000)]
build_test: Only run a minimal set of steps in debug configuration
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29094
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 21:53:42 +0000 (21:53 +0000)]
build_test: Bugfix
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29090
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 21:50:48 +0000 (21:50 +0000)]
build_test: Bugfix
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29089
0785d39b -7218-0410-832d-
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bangerth [Wed, 27 Mar 2013 20:07:09 +0000 (20:07 +0000)]
Add documentation to PreconditionAMG::AdditionalData.
git-svn-id: https://svn.dealii.org/trunk@29087
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 19:41:14 +0000 (19:41 +0000)]
Merge branch 'trunk' into branch_cmake
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29086
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 19:40:53 +0000 (19:40 +0000)]
Bugfix in build_test: Omit branches/ for branch names
git-svn-id: https://svn.dealii.org/trunk@29085
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 19:21:38 +0000 (19:21 +0000)]
CMake: Improve IDE support:
- Add headers and inst files to OBJECT targets
- Add OBJECT targets for "header only" template stuff
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29084
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 19:18:36 +0000 (19:18 +0000)]
Merge branch 'trunk' into branch_cmake
git-svn-id: https://svn.dealii.org/branches/branch_cmake@29083
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 17:37:14 +0000 (17:37 +0000)]
CMake: Bugfix
git-svn-id: https://svn.dealii.org/trunk@29082
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 17:11:27 +0000 (17:11 +0000)]
CMake: Disable all ENABLE_IF_LINKS checks for now until the macro is properly implemented
git-svn-id: https://svn.dealii.org/trunk@29081
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 17:11:26 +0000 (17:11 +0000)]
CMake: Bugfix: Implement ENABLE_IF_LINKS with CHECK_CXX_COMPILER_FLAG
git-svn-id: https://svn.dealii.org/trunk@29080
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 16:56:22 +0000 (16:56 +0000)]
CMake: Bugfix: Remove invalid characters from test names in ENABLE_IF_(SUPPORTED|LINKS)
git-svn-id: https://svn.dealii.org/trunk@29079
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 15:20:45 +0000 (15:20 +0000)]
remove code from TimerOutput that messes with the total time
git-svn-id: https://svn.dealii.org/trunk@29077
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 15:08:37 +0000 (15:08 +0000)]
fix test
git-svn-id: https://svn.dealii.org/trunk@29076
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 15:07:57 +0000 (15:07 +0000)]
convert more tests to MPI_InitFinalize
git-svn-id: https://svn.dealii.org/trunk@29075
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 14:53:45 +0000 (14:53 +0000)]
switch more tests to MPI_InitFinalize
git-svn-id: https://svn.dealii.org/trunk@29074
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 14:37:04 +0000 (14:37 +0000)]
remove deprecated compress calls
git-svn-id: https://svn.dealii.org/trunk@29073
0785d39b -7218-0410-832d-
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bangerth [Wed, 27 Mar 2013 14:22:53 +0000 (14:22 +0000)]
Outlaw the use of local_range() and in_local_range() if the vector is not contiguous on the current processor.
git-svn-id: https://svn.dealii.org/trunk@29072
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 14:02:46 +0000 (14:02 +0000)]
Don't run step-21 in the build_test.
git-svn-id: https://svn.dealii.org/trunk@29071
0785d39b -7218-0410-832d-
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bangerth [Wed, 27 Mar 2013 14:02:32 +0000 (14:02 +0000)]
Improve error message.
git-svn-id: https://svn.dealii.org/trunk@29070
0785d39b -7218-0410-832d-
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bangerth [Wed, 27 Mar 2013 13:59:55 +0000 (13:59 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@29069
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 11:13:39 +0000 (11:13 +0000)]
CMake: Enable -pedantic at the very beginning
git-svn-id: https://svn.dealii.org/trunk@29059
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 11:13:38 +0000 (11:13 +0000)]
CMake: Workaround a bug in CMake's XCode generator
git-svn-id: https://svn.dealii.org/trunk@29058
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 10:23:05 +0000 (10:23 +0000)]
Improve build_test:
- Remove obsolete lines from build_test
- add a bunch of tests to run and a toggle RUN_TESTS to skip this step
- run examples in debug and build configuration
git-svn-id: https://svn.dealii.org/trunk@29056
0785d39b -7218-0410-832d-
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maier [Wed, 27 Mar 2013 10:23:04 +0000 (10:23 +0000)]
CMake: Don't be too greedy when installing examples
git-svn-id: https://svn.dealii.org/trunk@29055
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 03:46:26 +0000 (03:46 +0000)]
switch tests to MPI_InitFinalize (some more to come)
git-svn-id: https://svn.dealii.org/trunk@29054
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 03:33:29 +0000 (03:33 +0000)]
make PETSc tests use MPI_InitFinalize
git-svn-id: https://svn.dealii.org/trunk@29053
0785d39b -7218-0410-832d-
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heister [Wed, 27 Mar 2013 03:31:17 +0000 (03:31 +0000)]
make MPI_InitFinalize initialize PETSc even if not using MPI
git-svn-id: https://svn.dealii.org/trunk@29052
0785d39b -7218-0410-832d-
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bangerth [Tue, 26 Mar 2013 21:33:19 +0000 (21:33 +0000)]
Several more.
git-svn-id: https://svn.dealii.org/trunk@29048
0785d39b -7218-0410-832d-
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heister [Tue, 26 Mar 2013 20:18:22 +0000 (20:18 +0000)]
PETSc examples work with threading enabled at configure time. Turn off at runtime.
git-svn-id: https://svn.dealii.org/trunk@29047
0785d39b -7218-0410-832d-
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heister [Tue, 26 Mar 2013 20:17:22 +0000 (20:17 +0000)]
Check at runtime that we do not use multiple threads when using PETSc vectors
git-svn-id: https://svn.dealii.org/trunk@29046
0785d39b -7218-0410-832d-
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heister [Tue, 26 Mar 2013 20:16:53 +0000 (20:16 +0000)]
Routine to set number of threads of TBB. MPI_InitFinalize by default sets it to 1.
git-svn-id: https://svn.dealii.org/trunk@29045
0785d39b -7218-0410-832d-
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heister [Tue, 26 Mar 2013 20:14:49 +0000 (20:14 +0000)]
Fix TimerOutput::reset() total time
git-svn-id: https://svn.dealii.org/trunk@29044
0785d39b -7218-0410-832d-
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bangerth [Tue, 26 Mar 2013 19:51:19 +0000 (19:51 +0000)]
Fix typo (reported by Yunhuang Zhang).
git-svn-id: https://svn.dealii.org/trunk@29043
0785d39b -7218-0410-832d-
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maier [Tue, 26 Mar 2013 12:48:08 +0000 (12:48 +0000)]
CMake: Bugfix: Add an INSTALL_NAME_DIR target property to avoid the use of DYLD_LIBRARY_PATH on Mac OS X
git-svn-id: https://svn.dealii.org/trunk@29038
0785d39b -7218-0410-832d-
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maier [Mon, 25 Mar 2013 15:10:41 +0000 (15:10 +0000)]
CMake: Resolve a cache invalidation problem
git-svn-id: https://svn.dealii.org/trunk@29028
0785d39b -7218-0410-832d-
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bangerth [Mon, 25 Mar 2013 14:53:34 +0000 (14:53 +0000)]
Patch by Juan Carlos Araujo Cabarcas: Explain how to use ARPACK as an alternative to SLEPc.
git-svn-id: https://svn.dealii.org/trunk@29027
0785d39b -7218-0410-832d-
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bangerth [Mon, 25 Mar 2013 14:10:40 +0000 (14:10 +0000)]
Formatting improvements.
git-svn-id: https://svn.dealii.org/trunk@29023
0785d39b -7218-0410-832d-
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bangerth [Sun, 24 Mar 2013 23:22:39 +0000 (23:22 +0000)]
Add a comment.
git-svn-id: https://svn.dealii.org/trunk@29020
0785d39b -7218-0410-832d-
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bangerth [Sun, 24 Mar 2013 23:11:14 +0000 (23:11 +0000)]
Make two constructor arguments references.
git-svn-id: https://svn.dealii.org/trunk@29019
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 22:41:12 +0000 (22:41 +0000)]
CMake: Remove unnecessary file globs
git-svn-id: https://svn.dealii.org/trunk@29018
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 20:06:48 +0000 (20:06 +0000)]
CMake: Fix a bunch of typos in ./doc/. This resolves the issue with multiple doxygen runs
git-svn-id: https://svn.dealii.org/trunk@29017
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 16:44:46 +0000 (16:44 +0000)]
CMake: Add librt.so to the link interface of UMFPACK to avoid an underlinkage problem.
git-svn-id: https://svn.dealii.org/trunk@29016
0785d39b -7218-0410-832d-
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bangerth [Sun, 24 Mar 2013 16:38:07 +0000 (16:38 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@29015
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 15:35:39 +0000 (15:35 +0000)]
Fix a typo
git-svn-id: https://svn.dealii.org/trunk@29014
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 13:33:57 +0000 (13:33 +0000)]
CMake: Improve documentation wrt manual overrides
git-svn-id: https://svn.dealii.org/trunk@29013
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 11:04:13 +0000 (11:04 +0000)]
CMake: Bugfix: Print out the component selection as well
git-svn-id: https://svn.dealii.org/trunk@29012
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 10:53:56 +0000 (10:53 +0000)]
CMake: Bugfix in FindTBB.cmake
git-svn-id: https://svn.dealii.org/trunk@29011
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 09:51:22 +0000 (09:51 +0000)]
CMake: Bugfix. Make bundled tbb compile again
git-svn-id: https://svn.dealii.org/trunk@29010
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 09:17:07 +0000 (09:17 +0000)]
CMake: Bugfix, switch the order of includes...
git-svn-id: https://svn.dealii.org/trunk@29009
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 01:34:48 +0000 (01:34 +0000)]
CMake: Bugfix, add SHLIBLD and SHLIBFLAGS back to Make.global_options
git-svn-id: https://svn.dealii.org/trunk@29008
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 01:22:32 +0000 (01:22 +0000)]
CMake: Make includes a bit more robust
git-svn-id: https://svn.dealii.org/trunk@29007
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 00:33:12 +0000 (00:33 +0000)]
CMake: Bugfix
git-svn-id: https://svn.dealii.org/trunk@29006
0785d39b -7218-0410-832d-
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maier [Sun, 24 Mar 2013 00:09:26 +0000 (00:09 +0000)]
Remove forgotten obsolete file
git-svn-id: https://svn.dealii.org/trunk@29005
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:36 +0000 (23:57 +0000)]
CMake: Finish CMake documentation
git-svn-id: https://svn.dealii.org/trunk@29004
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:19 +0000 (23:57 +0000)]
CMake: Bugfixes in configure_boost.cmake
git-svn-id: https://svn.dealii.org/trunk@29003
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:19 +0000 (23:57 +0000)]
CMake: Remove this little hack
git-svn-id: https://svn.dealii.org/trunk@29002
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:18 +0000 (23:57 +0000)]
CMake: Print external libraries in the summary
git-svn-id: https://svn.dealii.org/trunk@29001
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:17 +0000 (23:57 +0000)]
CMake: Fix a TODO in FindTBB.cmake
git-svn-id: https://svn.dealii.org/trunk@29000
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:16 +0000 (23:57 +0000)]
CMake: Some more documentation and code cleanup
git-svn-id: https://svn.dealii.org/trunk@28999
0785d39b -7218-0410-832d-
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maier [Sat, 23 Mar 2013 23:57:16 +0000 (23:57 +0000)]
Run some selected tests in the build_tests
git-svn-id: https://svn.dealii.org/trunk@28998
0785d39b -7218-0410-832d-
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heister [Fri, 22 Mar 2013 21:20:13 +0000 (21:20 +0000)]
benchmark: interactive plot
git-svn-id: https://svn.dealii.org/trunk@28995
0785d39b -7218-0410-832d-
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bangerth [Fri, 22 Mar 2013 19:41:17 +0000 (19:41 +0000)]
Document the use configuration of BLAS and LAPACK better.
git-svn-id: https://svn.dealii.org/trunk@28994
0785d39b -7218-0410-832d-
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young [Fri, 22 Mar 2013 15:52:10 +0000 (15:52 +0000)]
Function to instruct SLEPc to exploit symmetry operations.
git-svn-id: https://svn.dealii.org/trunk@28990
0785d39b -7218-0410-832d-
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young [Fri, 22 Mar 2013 14:45:26 +0000 (14:45 +0000)]
Remove 64BIT directive in PETScWrappers. PetscErrorCode is always right.
git-svn-id: https://svn.dealii.org/trunk@28987
0785d39b -7218-0410-832d-
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kanschat [Fri, 22 Mar 2013 13:36:35 +0000 (13:36 +0000)]
produce reproducible output
git-svn-id: https://svn.dealii.org/trunk@28985
0785d39b -7218-0410-832d-
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kanschat [Fri, 22 Mar 2013 13:35:11 +0000 (13:35 +0000)]
fix two more locations of double to int and remove date from output
git-svn-id: https://svn.dealii.org/trunk@28984
0785d39b -7218-0410-832d-
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heister [Fri, 22 Mar 2013 02:58:01 +0000 (02:58 +0000)]
fix warning
git-svn-id: https://svn.dealii.org/trunk@28980
0785d39b -7218-0410-832d-
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heister [Fri, 22 Mar 2013 02:55:41 +0000 (02:55 +0000)]
fix warning
git-svn-id: https://svn.dealii.org/trunk@28979
0785d39b -7218-0410-832d-
ea1e28bc413d
heien [Thu, 21 Mar 2013 20:43:30 +0000 (20:43 +0000)]
Bug fix for HDF5 output, now properly handles processors with 0 patches
git-svn-id: https://svn.dealii.org/trunk@28978
0785d39b -7218-0410-832d-
ea1e28bc413d
heister [Thu, 21 Mar 2013 18:43:04 +0000 (18:43 +0000)]
add newline at end of file
git-svn-id: https://svn.dealii.org/trunk@28977
0785d39b -7218-0410-832d-
ea1e28bc413d
heister [Thu, 21 Mar 2013 17:43:29 +0000 (17:43 +0000)]
step-42: do not allocate a fat matrix we are not going to use
git-svn-id: https://svn.dealii.org/trunk@28976
0785d39b -7218-0410-832d-
ea1e28bc413d
heister [Thu, 21 Mar 2013 17:37:54 +0000 (17:37 +0000)]
step-42: fix formatting and optional command line parameter
git-svn-id: https://svn.dealii.org/trunk@28975
0785d39b -7218-0410-832d-
ea1e28bc413d
heister [Thu, 21 Mar 2013 17:26:12 +0000 (17:26 +0000)]
fix typo
git-svn-id: https://svn.dealii.org/trunk@28974
0785d39b -7218-0410-832d-
ea1e28bc413d
kanschat [Thu, 21 Mar 2013 15:19:37 +0000 (15:19 +0000)]
try to fix warnings without seeing them
git-svn-id: https://svn.dealii.org/trunk@28971
0785d39b -7218-0410-832d-
ea1e28bc413d
bangerth [Thu, 21 Mar 2013 14:26:25 +0000 (14:26 +0000)]
Make compile again.
git-svn-id: https://svn.dealii.org/trunk@28970
0785d39b -7218-0410-832d-
ea1e28bc413d
kanschat [Thu, 21 Mar 2013 14:01:11 +0000 (14:01 +0000)]
change in IterativeInverse
git-svn-id: https://svn.dealii.org/trunk@28969
0785d39b -7218-0410-832d-
ea1e28bc413d
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