]> https://gitweb.dealii.org/ - dealii-svn.git/log
dealii-svn.git
12 years agomerge from mainline
heister [Wed, 31 Oct 2012 14:26:34 +0000 (14:26 +0000)]
merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27256 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoIndent HTML pages.
bangerth [Wed, 31 Oct 2012 11:57:32 +0000 (11:57 +0000)]
Indent HTML pages.

git-svn-id: https://svn.dealii.org/trunk@27253 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a bunch of typos and improve mark-up.
bangerth [Wed, 31 Oct 2012 11:39:28 +0000 (11:39 +0000)]
Fix a bunch of typos and improve mark-up.

git-svn-id: https://svn.dealii.org/trunk@27252 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoset all contraints to zero for solve
frohne [Tue, 30 Oct 2012 16:10:07 +0000 (16:10 +0000)]
set all contraints to zero for solve

git-svn-id: https://svn.dealii.org/trunk@27246 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoplot for adaptive contact
frohne [Tue, 30 Oct 2012 16:05:49 +0000 (16:05 +0000)]
plot for adaptive contact

git-svn-id: https://svn.dealii.org/trunk@27245 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoplot for strong scaling
frohne [Tue, 30 Oct 2012 16:05:01 +0000 (16:05 +0000)]
plot for strong scaling

git-svn-id: https://svn.dealii.org/trunk@27244 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUndo r27234, 27235, 27237. It was a nice idea but it doesn't work.
bangerth [Tue, 30 Oct 2012 15:30:21 +0000 (15:30 +0000)]
Undo r27234, 27235, 27237. It was a nice idea but it doesn't work.

git-svn-id: https://svn.dealii.org/trunk@27243 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoNew test.
bangerth [Tue, 30 Oct 2012 13:50:38 +0000 (13:50 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27238 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoWork around a problem introduced by adding the assertions a couple patches back.
bangerth [Tue, 30 Oct 2012 13:37:40 +0000 (13:37 +0000)]
Work around a problem introduced by adding the assertions a couple patches back.

git-svn-id: https://svn.dealii.org/trunk@27237 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a problem where DoFTools::make_flux_sparsity_pattern wasn't prepared to deal...
bangerth [Tue, 30 Oct 2012 13:32:41 +0000 (13:32 +0000)]
Fix a problem where DoFTools::make_flux_sparsity_pattern wasn't prepared to deal with adaptively refined meshes in 1d.

git-svn-id: https://svn.dealii.org/trunk@27236 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoActually make it so that it compiles.
bangerth [Tue, 30 Oct 2012 13:18:14 +0000 (13:18 +0000)]
Actually make it so that it compiles.

git-svn-id: https://svn.dealii.org/trunk@27235 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAdd a bunch of assertions to kill invalid behavior as early as possible (currently...
bangerth [Tue, 30 Oct 2012 13:05:57 +0000 (13:05 +0000)]
Add a bunch of assertions to kill invalid behavior as early as possible (currently we get some really weird follow-up errors deep down in the machinery.

git-svn-id: https://svn.dealii.org/trunk@27234 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMake work.
bangerth [Sat, 27 Oct 2012 11:38:03 +0000 (11:38 +0000)]
Make work.

git-svn-id: https://svn.dealii.org/trunk@27227 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoNew test.
bangerth [Sat, 27 Oct 2012 11:31:42 +0000 (11:31 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27226 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoput link to benchmarks into documentation
heister [Fri, 26 Oct 2012 21:47:09 +0000 (21:47 +0000)]
put link to benchmarks into documentation

git-svn-id: https://svn.dealii.org/trunk@27224 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agorename section
heister [Fri, 26 Oct 2012 21:10:21 +0000 (21:10 +0000)]
rename section

git-svn-id: https://svn.dealii.org/trunk@27223 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agomerge from mainline
heister [Fri, 26 Oct 2012 20:13:24 +0000 (20:13 +0000)]
merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27221 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoupdate test (this test used to print nan/-nan on different compilers, now TimerOutput...
heister [Fri, 26 Oct 2012 20:02:06 +0000 (20:02 +0000)]
update test (this test used to print nan/-nan on different compilers, now TimerOutput is fixed to just print 0.0)

git-svn-id: https://svn.dealii.org/trunk@27219 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoavoid printing NaN in TimerOutput.
heister [Fri, 26 Oct 2012 20:01:22 +0000 (20:01 +0000)]
avoid printing NaN in TimerOutput.

git-svn-id: https://svn.dealii.org/trunk@27218 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
steigemann [Fri, 26 Oct 2012 16:12:04 +0000 (16:12 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27209 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
steigemann [Fri, 26 Oct 2012 16:11:16 +0000 (16:11 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27208 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
steigemann [Fri, 26 Oct 2012 16:10:53 +0000 (16:10 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27207 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoremove warning
heister [Fri, 26 Oct 2012 15:14:04 +0000 (15:14 +0000)]
remove warning

git-svn-id: https://svn.dealii.org/trunk@27205 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoadd VectorInfo class
kanschat [Fri, 26 Oct 2012 10:07:46 +0000 (10:07 +0000)]
add VectorInfo class

git-svn-id: https://svn.dealii.org/trunk@27202 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoCatch adding NaN into a Trilinos SparseMatrix in all cases (in debug mode).
heister [Thu, 25 Oct 2012 14:10:42 +0000 (14:10 +0000)]
Catch adding NaN into a Trilinos SparseMatrix in all cases (in debug mode).

git-svn-id: https://svn.dealii.org/trunk@27201 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a typo introduced with r27140
maier [Wed, 24 Oct 2012 16:53:30 +0000 (16:53 +0000)]
Fix a typo introduced with r27140

git-svn-id: https://svn.dealii.org/trunk@27196 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAugment documentation.
bangerth [Wed, 24 Oct 2012 15:38:38 +0000 (15:38 +0000)]
Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@27192 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoEnable symmetry mode and pick data from the PETSc environment.
bangerth [Wed, 24 Oct 2012 02:44:37 +0000 (02:44 +0000)]
Enable symmetry mode and pick data from the PETSc environment.

git-svn-id: https://svn.dealii.org/trunk@27190 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agofix Trilinos tests for Trilinos 11.
heister [Mon, 22 Oct 2012 21:31:01 +0000 (21:31 +0000)]
fix Trilinos tests for Trilinos 11.

git-svn-id: https://svn.dealii.org/trunk@27172 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agomore fixes for Trilinos 11.
heister [Mon, 22 Oct 2012 21:30:26 +0000 (21:30 +0000)]
more fixes for Trilinos 11.

git-svn-id: https://svn.dealii.org/trunk@27171 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agofixes for trilinos 11. EPetra now supports long and int which causes ambiguous calls...
heister [Mon, 22 Oct 2012 21:05:40 +0000 (21:05 +0000)]
fixes for trilinos 11. EPetra now supports long and int which causes ambiguous calls when using unsigned int.

git-svn-id: https://svn.dealii.org/trunk@27170 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRe-word the supported platforms list. Update mailing list address.
bangerth [Mon, 22 Oct 2012 15:42:38 +0000 (15:42 +0000)]
Re-word the supported platforms list. Update mailing list address.

git-svn-id: https://svn.dealii.org/trunk@27163 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRe-word the supported platforms list. Update mailing list address.
bangerth [Mon, 22 Oct 2012 15:41:15 +0000 (15:41 +0000)]
Re-word the supported platforms list. Update mailing list address.

git-svn-id: https://svn.dealii.org/trunk@27162 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRemove a paragraph.
bangerth [Mon, 22 Oct 2012 15:32:06 +0000 (15:32 +0000)]
Remove a paragraph.

git-svn-id: https://svn.dealii.org/trunk@27161 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoProduce an error for an operation that doesn't make any sense in 1d.
bangerth [Sat, 20 Oct 2012 02:32:21 +0000 (02:32 +0000)]
Produce an error for an operation that doesn't make any sense in 1d.

git-svn-id: https://svn.dealii.org/trunk@27150 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agofix warning (thanks Uwe)
heister [Thu, 18 Oct 2012 16:17:11 +0000 (16:17 +0000)]
fix warning (thanks Uwe)

git-svn-id: https://svn.dealii.org/trunk@27142 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agomerge from mainline
heister [Thu, 18 Oct 2012 16:16:46 +0000 (16:16 +0000)]
merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27141 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a misleading sentence in the documentation.
bangerth [Wed, 17 Oct 2012 19:24:43 +0000 (19:24 +0000)]
Fix a misleading sentence in the documentation.

git-svn-id: https://svn.dealii.org/trunk@27140 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a misleading sentence in the documentation.
bangerth [Wed, 17 Oct 2012 18:58:00 +0000 (18:58 +0000)]
Fix a misleading sentence in the documentation.

git-svn-id: https://svn.dealii.org/trunk@27139 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUpdate publication 2013.
young [Tue, 16 Oct 2012 11:48:47 +0000 (11:48 +0000)]
Update publication 2013.

git-svn-id: https://svn.dealii.org/trunk@27135 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAdd some to the documentation.
bangerth [Mon, 15 Oct 2012 19:47:48 +0000 (19:47 +0000)]
Add some to the documentation.

git-svn-id: https://svn.dealii.org/trunk@27130 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRemove a couple of outdated comments.
bangerth [Mon, 15 Oct 2012 18:47:10 +0000 (18:47 +0000)]
Remove a couple of outdated comments.

git-svn-id: https://svn.dealii.org/trunk@27128 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoTake over 26990 from branch_cmake as well.
bangerth [Sun, 14 Oct 2012 22:36:51 +0000 (22:36 +0000)]
Take over 26990 from branch_cmake as well.

git-svn-id: https://svn.dealii.org/trunk@27125 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAlso check for sys/resource.h.
bangerth [Sun, 14 Oct 2012 22:25:21 +0000 (22:25 +0000)]
Also check for sys/resource.h.

git-svn-id: https://svn.dealii.org/trunk@27124 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoTake over most of what's in patches r26981:26988 on branch_cmake.
bangerth [Sun, 14 Oct 2012 22:09:32 +0000 (22:09 +0000)]
Take over most of what's in patches r26981:26988 on branch_cmake.

git-svn-id: https://svn.dealii.org/trunk@27123 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoCheck for availability of <sys/time.h>.
bangerth [Sun, 14 Oct 2012 21:59:54 +0000 (21:59 +0000)]
Check for availability of <sys/time.h>.

git-svn-id: https://svn.dealii.org/trunk@27122 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRemove tests from configure.in that had previously been removed from aclocal.m4 and...
bangerth [Sun, 14 Oct 2012 21:53:15 +0000 (21:53 +0000)]
Remove tests from configure.in that had previously been removed from aclocal.m4 and have since been giving us errors onto the console.

git-svn-id: https://svn.dealii.org/trunk@27121 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAdd an instantiation.
bangerth [Sun, 14 Oct 2012 03:00:30 +0000 (03:00 +0000)]
Add an instantiation.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27116 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMerge from mainline.
bangerth [Sun, 14 Oct 2012 00:41:25 +0000 (00:41 +0000)]
Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27114 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUndo accidental merge of this file.
bangerth [Sat, 13 Oct 2012 21:19:11 +0000 (21:19 +0000)]
Undo accidental merge of this file.

git-svn-id: https://svn.dealii.org/trunk@27111 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoReintegrate branch_eliminate_iterator_functions.
bangerth [Sat, 13 Oct 2012 21:12:41 +0000 (21:12 +0000)]
Reintegrate branch_eliminate_iterator_functions.

git-svn-id: https://svn.dealii.org/trunk@27110 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix typo.
bangerth [Sat, 13 Oct 2012 12:39:13 +0000 (12:39 +0000)]
Fix typo.

git-svn-id: https://svn.dealii.org/trunk@27107 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRe-indent the whole file to make merging less painful.
bangerth [Sat, 13 Oct 2012 12:34:17 +0000 (12:34 +0000)]
Re-indent the whole file to make merging less painful.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27105 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRemove references to merged branched from mainline.
bangerth [Sat, 13 Oct 2012 12:24:37 +0000 (12:24 +0000)]
Remove references to merged branched from mainline.

git-svn-id: https://svn.dealii.org/trunk@27104 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMerge from mainline.
bangerth [Sat, 13 Oct 2012 03:40:39 +0000 (03:40 +0000)]
Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27101 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoNew test.
bangerth [Fri, 12 Oct 2012 16:20:34 +0000 (16:20 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27088 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a few markup problems.
bangerth [Fri, 12 Oct 2012 13:53:06 +0000 (13:53 +0000)]
Fix a few markup problems.

git-svn-id: https://svn.dealii.org/trunk@27083 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agohopefully make numbering less depending on roundoff errors
kanschat [Fri, 12 Oct 2012 13:47:47 +0000 (13:47 +0000)]
hopefully make numbering less depending on roundoff errors

git-svn-id: https://svn.dealii.org/trunk@27081 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoWrite glossary entries for user flags and user data. Link to it.
bangerth [Fri, 12 Oct 2012 13:21:30 +0000 (13:21 +0000)]
Write glossary entries for user flags and user data. Link to it.

git-svn-id: https://svn.dealii.org/trunk@27080 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAnother test.
bangerth [Fri, 12 Oct 2012 03:12:30 +0000 (03:12 +0000)]
Another test.

git-svn-id: https://svn.dealii.org/trunk@27069 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoNew test.
bangerth [Fri, 12 Oct 2012 03:08:44 +0000 (03:08 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27068 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix language.
bangerth [Thu, 11 Oct 2012 23:58:40 +0000 (23:58 +0000)]
Fix language.

git-svn-id: https://svn.dealii.org/trunk@27065 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoProperly instantiate a few static variables.
bangerth [Thu, 11 Oct 2012 23:58:19 +0000 (23:58 +0000)]
Properly instantiate a few static variables.

git-svn-id: https://svn.dealii.org/trunk@27064 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMake interface similar to the one for UMFPACK.
buerg [Thu, 11 Oct 2012 09:23:54 +0000 (09:23 +0000)]
Make interface similar to the one for UMFPACK.

git-svn-id: https://svn.dealii.org/trunk@27061 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoupdated bench.sh to output results from 3 tests per revision
cazamias [Wed, 10 Oct 2012 21:01:40 +0000 (21:01 +0000)]
updated bench.sh to output results from 3 tests per revision

git-svn-id: https://svn.dealii.org/trunk@27060 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAvoid a warning about a potentially uninitialized variable.
bangerth [Wed, 10 Oct 2012 20:59:51 +0000 (20:59 +0000)]
Avoid a warning about a potentially uninitialized variable.

git-svn-id: https://svn.dealii.org/trunk@27059 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUpdated get_times.cc to collect minimum times of multiple tests
cazamias [Wed, 10 Oct 2012 17:03:36 +0000 (17:03 +0000)]
Updated get_times.cc to collect minimum times of multiple tests

git-svn-id: https://svn.dealii.org/trunk@27057 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agospeed up test
heister [Wed, 10 Oct 2012 15:52:45 +0000 (15:52 +0000)]
speed up test

git-svn-id: https://svn.dealii.org/trunk@27054 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix compile issue with clang++-v3.1
maier [Wed, 10 Oct 2012 13:22:55 +0000 (13:22 +0000)]
Fix compile issue with clang++-v3.1

git-svn-id: https://svn.dealii.org/trunk@27048 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoActually instantiate SparseDirectMumps::initialize to make gcc-4.7 happy
maier [Wed, 10 Oct 2012 08:17:13 +0000 (08:17 +0000)]
Actually instantiate SparseDirectMumps::initialize to make gcc-4.7 happy

Also fixup some unsigned int* -> int* type conversions gcc-4.7 barks about very
loudly because they are not permitted by ISO C++ (ISO C++ 11)

git-svn-id: https://svn.dealii.org/trunk@27044 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a typo
maier [Wed, 10 Oct 2012 07:43:14 +0000 (07:43 +0000)]
Fix a typo

git-svn-id: https://svn.dealii.org/trunk@27043 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agotreat lucky breakdown in GMRES and FGMRES
heister [Tue, 9 Oct 2012 22:08:00 +0000 (22:08 +0000)]
treat lucky breakdown in GMRES and FGMRES

git-svn-id: https://svn.dealii.org/trunk@27040 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoalso test fgmres for lucky breakdown
heister [Tue, 9 Oct 2012 22:02:45 +0000 (22:02 +0000)]
also test fgmres for lucky breakdown

git-svn-id: https://svn.dealii.org/trunk@27039 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoadd test for lucky breakdown
heister [Tue, 9 Oct 2012 21:52:30 +0000 (21:52 +0000)]
add test for lucky breakdown

git-svn-id: https://svn.dealii.org/trunk@27038 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUpdate test result.
bangerth [Tue, 9 Oct 2012 13:57:38 +0000 (13:57 +0000)]
Update test result.

git-svn-id: https://svn.dealii.org/trunk@27030 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agotreat tke lucky breakdown, otherwise we had devision by zero
janssen [Tue, 9 Oct 2012 12:46:18 +0000 (12:46 +0000)]
treat tke lucky breakdown, otherwise we had devision by zero

git-svn-id: https://svn.dealii.org/trunk@27026 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoReally go through all neighbors of a vertex.
bangerth [Tue, 9 Oct 2012 12:44:57 +0000 (12:44 +0000)]
Really go through all neighbors of a vertex.

git-svn-id: https://svn.dealii.org/trunk@27025 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAdd comment to SCALAPACK section.
buerg [Mon, 8 Oct 2012 18:31:56 +0000 (18:31 +0000)]
Add comment to SCALAPACK section.

git-svn-id: https://svn.dealii.org/trunk@27014 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFix a problem in GridTools::find_cells_adjacent_to_vertex with anisotropic refinement.
bangerth [Mon, 8 Oct 2012 17:31:55 +0000 (17:31 +0000)]
Fix a problem in GridTools::find_cells_adjacent_to_vertex with anisotropic refinement.

git-svn-id: https://svn.dealii.org/trunk@27010 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMerge from mainline.
bangerth [Mon, 8 Oct 2012 15:53:07 +0000 (15:53 +0000)]
Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27008 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agofix typo
heister [Mon, 8 Oct 2012 14:24:49 +0000 (14:24 +0000)]
fix typo

git-svn-id: https://svn.dealii.org/trunk@27005 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUndo r26920 since that appears to have led to numerous testsuite failures.
bangerth [Mon, 8 Oct 2012 12:31:45 +0000 (12:31 +0000)]
Undo r26920 since that appears to have led to numerous testsuite failures.

git-svn-id: https://svn.dealii.org/trunk@27002 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoAvoid warning about unused argument.
bangerth [Mon, 8 Oct 2012 11:52:33 +0000 (11:52 +0000)]
Avoid warning about unused argument.

git-svn-id: https://svn.dealii.org/trunk@27000 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoSimplify code.
bangerth [Mon, 8 Oct 2012 03:05:13 +0000 (03:05 +0000)]
Simplify code.

git-svn-id: https://svn.dealii.org/trunk@26999 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoNew, failing test.
bangerth [Mon, 8 Oct 2012 02:38:53 +0000 (02:38 +0000)]
New, failing test.

git-svn-id: https://svn.dealii.org/trunk@26995 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoEdited plot.sh to use test parameter
cazamias [Wed, 3 Oct 2012 21:57:45 +0000 (21:57 +0000)]
Edited plot.sh to use test parameter

git-svn-id: https://svn.dealii.org/trunk@26938 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUpdated bench.sh to extract names
cazamias [Wed, 3 Oct 2012 21:50:57 +0000 (21:50 +0000)]
Updated bench.sh to extract names

git-svn-id: https://svn.dealii.org/trunk@26937 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoDefine
bangerth [Wed, 3 Oct 2012 18:33:04 +0000 (18:33 +0000)]
Define
   DEAL_II_PETSC_LIBDIR     = $(DEAL_II_PETSC_DIR)/$(DEAL_II_PETSC_ARCH)/lib
since this variable is used in source/Makefile.

git-svn-id: https://svn.dealii.org/trunk@26936 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoTake over patches 26839 to 26844 from Matthias' branch for cmake conversion. These...
bangerth [Tue, 2 Oct 2012 05:32:32 +0000 (05:32 +0000)]
Take over patches 26839 to 26844 from Matthias' branch for cmake conversion. These patches clean up compiler bug tests that are from the gcc 2.95 and 3.x era and almost certainly no longer apply to the current crop of compilers we have.

git-svn-id: https://svn.dealii.org/trunk@26920 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agomerge from mainline
heister [Mon, 1 Oct 2012 15:23:44 +0000 (15:23 +0000)]
merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@26912 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoUpdate documentation in a couple of places.
bangerth [Sun, 30 Sep 2012 16:06:12 +0000 (16:06 +0000)]
Update documentation in a couple of places.

git-svn-id: https://svn.dealii.org/trunk@26891 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoRemove some old parts of the code dealing with PETSc versions prior to 2.3. Add some...
bangerth [Fri, 28 Sep 2012 23:29:04 +0000 (23:29 +0000)]
Remove some old parts of the code dealing with PETSc versions prior to 2.3. Add some comments.

git-svn-id: https://svn.dealii.org/trunk@26874 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agosimplify more dublicated code in fe_system
heister [Fri, 28 Sep 2012 21:56:08 +0000 (21:56 +0000)]
simplify more dublicated code in fe_system

git-svn-id: https://svn.dealii.org/trunk@26867 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agosimplify dublicated code in fe_system
heister [Fri, 28 Sep 2012 21:49:00 +0000 (21:49 +0000)]
simplify dublicated code in fe_system

git-svn-id: https://svn.dealii.org/trunk@26866 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agomove test into bits because it works now
heister [Fri, 28 Sep 2012 19:38:07 +0000 (19:38 +0000)]
move test into bits because it works now

git-svn-id: https://svn.dealii.org/trunk@26865 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoupdate test output
heister [Fri, 28 Sep 2012 19:33:56 +0000 (19:33 +0000)]
update test output

git-svn-id: https://svn.dealii.org/trunk@26864 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoupdate tests for FESystem
heister [Fri, 28 Sep 2012 19:32:59 +0000 (19:32 +0000)]
update tests for FESystem

git-svn-id: https://svn.dealii.org/trunk@26863 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoFESystem can now deal with n_elements==0 for a block. Remove a ton of dublicated...
heister [Fri, 28 Sep 2012 19:32:18 +0000 (19:32 +0000)]
FESystem can now deal with n_elements==0 for a block. Remove a ton of dublicated code in the process.

git-svn-id: https://svn.dealii.org/trunk@26862 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoChange make_dependencies to ignore -D command line options rather than error out
heien [Fri, 28 Sep 2012 18:24:15 +0000 (18:24 +0000)]
Change make_dependencies to ignore -D command line options rather than error out

git-svn-id: https://svn.dealii.org/trunk@26857 0785d39b-7218-0410-832d-ea1e28bc413d

12 years agoMove a piece of code where it is necessary.
bangerth [Fri, 28 Sep 2012 18:04:37 +0000 (18:04 +0000)]
Move a piece of code where it is necessary.

git-svn-id: https://svn.dealii.org/trunk@26856 0785d39b-7218-0410-832d-ea1e28bc413d


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