]>
https://gitweb.dealii.org/ - dealii-svn.git/log
bangerth [Mon, 31 Dec 2012 22:43:01 +0000 (22:43 +0000)]
Avoid use of a deprecated function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27887
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bangerth [Mon, 31 Dec 2012 21:45:52 +0000 (21:45 +0000)]
Avoid use of the deprecated Table::data() function by making use of the fact that FullMatrix and LapackFullMatrix are derived from Table and are therefore able to access the (protected) member variable that stores the actual data.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27886
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maier [Mon, 31 Dec 2012 11:13:45 +0000 (11:13 +0000)]
Merge branch 'branch_cmake' into branch_deprecated
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27885
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maier [Mon, 31 Dec 2012 11:12:46 +0000 (11:12 +0000)]
Silence some warnings
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27884
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bangerth [Mon, 31 Dec 2012 04:47:37 +0000 (04:47 +0000)]
Simplify one function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27883
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bangerth [Mon, 31 Dec 2012 02:25:02 +0000 (02:25 +0000)]
Make compile.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27882
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bangerth [Mon, 31 Dec 2012 02:23:25 +0000 (02:23 +0000)]
Avoid one use of SparseMatrix::global_entry in favor of using iterators.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27881
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bangerth [Mon, 31 Dec 2012 02:22:23 +0000 (02:22 +0000)]
Make compile.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27880
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bangerth [Mon, 31 Dec 2012 01:03:37 +0000 (01:03 +0000)]
Do not worry too much about the 1d case -- everything is cheap there. Conserve
some memory also in the MG case and thereby resolve a TODO.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27879
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bangerth [Mon, 31 Dec 2012 00:58:50 +0000 (00:58 +0000)]
Do not worry too much about the 1d case -- everything is cheap there.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27878
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bangerth [Mon, 31 Dec 2012 00:14:38 +0000 (00:14 +0000)]
Undeprecate a couple of functions.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27876
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bangerth [Sun, 30 Dec 2012 02:24:10 +0000 (02:24 +0000)]
Un-deprecate a function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27875
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bangerth [Sun, 30 Dec 2012 02:23:05 +0000 (02:23 +0000)]
Fix more typos.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27874
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bangerth [Sun, 30 Dec 2012 02:15:52 +0000 (02:15 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27873
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bangerth [Sun, 30 Dec 2012 02:13:10 +0000 (02:13 +0000)]
Improve documentation.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27872
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bangerth [Sun, 30 Dec 2012 02:09:20 +0000 (02:09 +0000)]
Un-deprecated a function and explain alternatives when appropriate.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27871
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bangerth [Sun, 30 Dec 2012 01:27:45 +0000 (01:27 +0000)]
Improve wording of error message.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27870
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maier [Sat, 29 Dec 2012 21:10:56 +0000 (21:10 +0000)]
Some more cleanup
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27869
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maier [Fri, 28 Dec 2012 23:23:22 +0000 (23:23 +0000)]
Bugfix: Fix a copy and paste typo
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27868
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maier [Fri, 28 Dec 2012 23:16:56 +0000 (23:16 +0000)]
Some more cleanup
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27867
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maier [Fri, 28 Dec 2012 22:41:20 +0000 (22:41 +0000)]
Merge from branch_cmake
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27866
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maier [Fri, 28 Dec 2012 08:43:14 +0000 (08:43 +0000)]
Merge from Mainline
Conflicts:
deal.II/Makefile
deal.II/common/Make.global_options.in
deal.II/doc/external-libs/mumps.html
deal.II/include/deal.II/lac/block_indices.h
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27863
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kronbichler [Thu, 27 Dec 2012 16:41:06 +0000 (16:41 +0000)]
Two more MPI_Allreduce commands that should not be called when using a single processor.
git-svn-id: https://svn.dealii.org/trunk@27861
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kronbichler [Thu, 27 Dec 2012 14:26:22 +0000 (14:26 +0000)]
Adjust output.
git-svn-id: https://svn.dealii.org/trunk@27860
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kronbichler [Thu, 27 Dec 2012 14:15:04 +0000 (14:15 +0000)]
Avoid calls to MPI_Allreduce for vectors where only one processor participates.
git-svn-id: https://svn.dealii.org/trunk@27859
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kronbichler [Thu, 27 Dec 2012 13:12:28 +0000 (13:12 +0000)]
Avoid compiler warning.
git-svn-id: https://svn.dealii.org/trunk@27858
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bangerth [Thu, 27 Dec 2012 01:50:21 +0000 (01:50 +0000)]
Hm, that doesn't work. Try std::fpclassify instead.
git-svn-id: https://svn.dealii.org/trunk@27857
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bangerth [Wed, 26 Dec 2012 20:18:04 +0000 (20:18 +0000)]
Fix another one.
git-svn-id: https://svn.dealii.org/trunk@27856
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bangerth [Wed, 26 Dec 2012 20:17:45 +0000 (20:17 +0000)]
Fix typos.
git-svn-id: https://svn.dealii.org/trunk@27855
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bangerth [Tue, 25 Dec 2012 15:05:57 +0000 (15:05 +0000)]
Avoid an ambiguity between ::fpclassify and std::fpclassify with recent Intel compilers.
git-svn-id: https://svn.dealii.org/trunk@27854
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bangerth [Tue, 25 Dec 2012 14:57:35 +0000 (14:57 +0000)]
Fix an issue with the Intel compiler (reported by Ted Kord).
git-svn-id: https://svn.dealii.org/trunk@27853
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kanschat [Fri, 21 Dec 2012 15:24:03 +0000 (15:24 +0000)]
identify branch on new server
git-svn-id: https://svn.dealii.org/trunk@27851
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kronbichler [Fri, 21 Dec 2012 14:15:12 +0000 (14:15 +0000)]
Simplify construction of dof connectivity graph by using deal.II data structures. Those are a little slower, but much more reliable and concise.
git-svn-id: https://svn.dealii.org/trunk@27850
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heister [Fri, 21 Dec 2012 02:51:02 +0000 (02:51 +0000)]
make indent
git-svn-id: https://svn.dealii.org/trunk@27847
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heister [Fri, 21 Dec 2012 02:47:21 +0000 (02:47 +0000)]
call indent for each file separately in the hope that this fixes some strange indentation inconsistencies
git-svn-id: https://svn.dealii.org/trunk@27846
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kronbichler [Wed, 19 Dec 2012 11:34:13 +0000 (11:34 +0000)]
Explicitly instantiate some internal structs to ensure these are always generated.
git-svn-id: https://svn.dealii.org/trunk@27827
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kronbichler [Wed, 19 Dec 2012 11:07:02 +0000 (11:07 +0000)]
Use generic instantiation procedure for selecting vectors in solution transfer.
git-svn-id: https://svn.dealii.org/trunk@27826
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kronbichler [Mon, 17 Dec 2012 09:22:26 +0000 (09:22 +0000)]
Matrix-vector product with deal.II vectors and Trilinos matrix are can be readily performed.
git-svn-id: https://svn.dealii.org/trunk@27825
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bangerth [Fri, 14 Dec 2012 12:15:55 +0000 (12:15 +0000)]
Break the instructions for PETSc and Trilinos into separate files.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27824
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kronbichler [Fri, 14 Dec 2012 12:13:31 +0000 (12:13 +0000)]
Add one more access function. Reindent comments.
git-svn-id: https://svn.dealii.org/trunk@27823
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maier [Fri, 14 Dec 2012 10:10:47 +0000 (10:10 +0000)]
Merge from Mainline
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27822
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bangerth [Fri, 14 Dec 2012 02:41:42 +0000 (02:41 +0000)]
Augment a comment.
git-svn-id: https://svn.dealii.org/trunk@27821
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bangerth [Fri, 14 Dec 2012 02:30:13 +0000 (02:30 +0000)]
Augment documentation some more.
git-svn-id: https://svn.dealii.org/trunk@27820
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maier [Thu, 13 Dec 2012 17:59:25 +0000 (17:59 +0000)]
Avoid face_to_equivalent_cell_index
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27812
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maier [Thu, 13 Dec 2012 17:59:24 +0000 (17:59 +0000)]
A bunch of trivial name changes
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27811
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maier [Thu, 13 Dec 2012 17:59:23 +0000 (17:59 +0000)]
TODO: This three "deprecated" functions are used internally incredibly often...
... and "deprecated" seems to refer to the user interface and not internal
usage
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27810
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maier [Thu, 13 Dec 2012 17:59:22 +0000 (17:59 +0000)]
*sigh* I have the impression that I will do this very, very often
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27809
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maier [Thu, 13 Dec 2012 17:59:21 +0000 (17:59 +0000)]
ThreadMutex -> Mutex
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27808
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maier [Thu, 13 Dec 2012 17:59:20 +0000 (17:59 +0000)]
Avoid usage of deprecated methods and classes in source/base
ThreadMutex -> Mutex
Implement vector::scale in operator*=
Drop deprecated attribute for Logstream::push/pop for now
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27807
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maier [Thu, 13 Dec 2012 17:57:48 +0000 (17:57 +0000)]
Merge from branch_cmake
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27806
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bangerth [Thu, 13 Dec 2012 07:15:16 +0000 (07:15 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@27805
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maier [Wed, 12 Dec 2012 21:24:40 +0000 (21:24 +0000)]
Merge from Mainline
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27804
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maier [Wed, 12 Dec 2012 21:23:14 +0000 (21:23 +0000)]
Update CMake-Regressions
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27803
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maier [Wed, 12 Dec 2012 21:23:02 +0000 (21:23 +0000)]
Some minor bugfixes in the testsuite
git-svn-id: https://svn.dealii.org/trunk@27802
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kronbichler [Wed, 12 Dec 2012 15:31:35 +0000 (15:31 +0000)]
Undo 27799 on vectorization as the new trick did the same thing and obscured things.
git-svn-id: https://svn.dealii.org/trunk@27801
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kronbichler [Wed, 12 Dec 2012 14:37:49 +0000 (14:37 +0000)]
Removed two more occurences of inproper use of reinterpret_cast
git-svn-id: https://svn.dealii.org/trunk@27800
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kronbichler [Wed, 12 Dec 2012 14:19:47 +0000 (14:19 +0000)]
Replace reinterpret_cast by static_cast in access to individual elements of vectorized data types.
git-svn-id: https://svn.dealii.org/trunk@27799
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maier [Wed, 12 Dec 2012 14:16:07 +0000 (14:16 +0000)]
Merge from Mainline
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27798
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kronbichler [Wed, 12 Dec 2012 13:55:01 +0000 (13:55 +0000)]
Avoid some more reinterpret_cast
git-svn-id: https://svn.dealii.org/trunk@27797
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kronbichler [Wed, 12 Dec 2012 13:38:38 +0000 (13:38 +0000)]
Avoid reinterpret_cast by making the declaration of struct ShapeFunctionData in FEValuesViews::Scalar/Vector public.
git-svn-id: https://svn.dealii.org/trunk@27796
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bangerth [Wed, 12 Dec 2012 12:58:51 +0000 (12:58 +0000)]
There used to be a requirement that threads can only be joined by the thread that created it. This doesn't appear to be the case any more, so we can't rely on it any more to take shortcuts.
git-svn-id: https://svn.dealii.org/trunk@27795
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bangerth [Wed, 12 Dec 2012 12:21:26 +0000 (12:21 +0000)]
Mention r27793. Also reorder things a bit.
git-svn-id: https://svn.dealii.org/trunk@27794
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bangerth [Wed, 12 Dec 2012 12:21:11 +0000 (12:21 +0000)]
Patch by Alexander Grayver: Release memort in SparseDirectMUMPS.
git-svn-id: https://svn.dealii.org/trunk@27793
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maier [Tue, 11 Dec 2012 17:10:23 +0000 (17:10 +0000)]
Revert "Forgot to commit this change for the previous commit" and "Change to virtual inheritance of Subscriptor"
This was a bad idea.
Internally Subscriptor is abused in a significant number of places as a
strict aliasing enforcer... and we would break this behaviour with virtual
inheritance
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27792
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maier [Tue, 11 Dec 2012 16:35:28 +0000 (16:35 +0000)]
Forgot to commit this change for the previous commit
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27791
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maier [Tue, 11 Dec 2012 15:46:31 +0000 (15:46 +0000)]
Change to virtual inheritance of Subscriptor
This way, multiple inheritance of deal.II classes still provide only one
Subscriptor base class.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27790
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kronbichler [Mon, 10 Dec 2012 10:33:22 +0000 (10:33 +0000)]
Fix one border case in initialization on non-constant Jacobians.
git-svn-id: https://svn.dealii.org/trunk@27789
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maier [Sun, 9 Dec 2012 13:03:11 +0000 (13:03 +0000)]
Merge from Mainline
Conflicts:
deal.II/doc/development/svn.html
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27788
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kanschat [Sun, 9 Dec 2012 11:01:53 +0000 (11:01 +0000)]
add charset
git-svn-id: https://svn.dealii.org/trunk@27787
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kronbichler [Sun, 9 Dec 2012 10:06:32 +0000 (10:06 +0000)]
ConstraintMatrix can perform distribute_local_to_global also in non-closed form as long as there are no constraints without any errors (this enables the use of a ConstraintMatrix dummy when one wants to more quickly write into sparse matrices).
git-svn-id: https://svn.dealii.org/trunk@27786
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kronbichler [Sun, 9 Dec 2012 09:57:03 +0000 (09:57 +0000)]
One more reindentation/refill of comments.
git-svn-id: https://svn.dealii.org/trunk@27785
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kronbichler [Sun, 9 Dec 2012 09:56:21 +0000 (09:56 +0000)]
Small update in comment.
git-svn-id: https://svn.dealii.org/trunk@27784
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kronbichler [Sun, 9 Dec 2012 09:55:15 +0000 (09:55 +0000)]
Reindent/refill comments in a few files to improve readability.
git-svn-id: https://svn.dealii.org/trunk@27783
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bangerth [Sat, 8 Dec 2012 19:54:35 +0000 (19:54 +0000)]
Add operator!=.
git-svn-id: https://svn.dealii.org/trunk@27782
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kanschat [Sat, 8 Dec 2012 19:09:01 +0000 (19:09 +0000)]
add a note
git-svn-id: https://svn.dealii.org/trunk@27781
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kanschat [Sat, 8 Dec 2012 18:35:14 +0000 (18:35 +0000)]
missing properties
git-svn-id: https://svn.dealii.org/trunk@27780
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bangerth [Fri, 7 Dec 2012 19:55:47 +0000 (19:55 +0000)]
Doc updates.
git-svn-id: https://svn.dealii.org/trunk@27779
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bangerth [Fri, 7 Dec 2012 19:55:13 +0000 (19:55 +0000)]
Minor doc updates.
git-svn-id: https://svn.dealii.org/trunk@27778
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bangerth [Fri, 7 Dec 2012 09:46:13 +0000 (09:46 +0000)]
Update documentation.
git-svn-id: https://svn.dealii.org/trunk@27777
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kronbichler [Fri, 7 Dec 2012 09:07:10 +0000 (09:07 +0000)]
Improve comments. Improve check for over-/underflow in l2_norm slightly.
git-svn-id: https://svn.dealii.org/trunk@27776
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kronbichler [Thu, 6 Dec 2012 14:14:07 +0000 (14:14 +0000)]
Revised get_function_xxx methods: Put the evaluation part into separate functions. This makes code simpler as several user methods can use the same implementation. Also, we avoid to recompile them for _every_ global VectorType with exactly the same content. This speeds up compilation of fe_values.o by about a factor 2.
git-svn-id: https://svn.dealii.org/trunk@27775
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kanschat [Thu, 6 Dec 2012 07:45:45 +0000 (07:45 +0000)]
Replace old repository links
git-svn-id: https://svn.dealii.org/trunk@27774
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bangerth [Wed, 5 Dec 2012 21:11:38 +0000 (21:11 +0000)]
Move inline functions to where they should be.
git-svn-id: https://svn.dealii.org/trunk@27773
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maier [Wed, 5 Dec 2012 19:50:48 +0000 (19:50 +0000)]
A more complete list of failing tests
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27772
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maier [Wed, 5 Dec 2012 18:26:55 +0000 (18:26 +0000)]
*sigh*
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27771
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maier [Wed, 5 Dec 2012 18:13:30 +0000 (18:13 +0000)]
Bugfix: Link against the correct library
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27770
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maier [Wed, 5 Dec 2012 18:13:30 +0000 (18:13 +0000)]
Improve the generated Make.global_options file
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27769
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maier [Wed, 5 Dec 2012 18:13:29 +0000 (18:13 +0000)]
Remove an obsolete test in configure_1_threads.cmake:
With -pthread all necessary preprocessor definitions should be already set.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27768
0785d39b -7218-0410-832d-
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heister [Wed, 5 Dec 2012 17:27:56 +0000 (17:27 +0000)]
update publication
git-svn-id: https://svn.dealii.org/trunk@27767
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 15:53:14 +0000 (15:53 +0000)]
Add a missing cc file to CMakeLists.txt
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27766
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 15:38:05 +0000 (15:38 +0000)]
Rename DEAL2_DIR to DEAL_II_DIR in the testsuite
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27765
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 14:29:58 +0000 (14:29 +0000)]
Document some regressions in the test suite to fix them later (hopefully soon)
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27764
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 14:12:46 +0000 (14:12 +0000)]
Bugfix: Fix an accidentally commited merge conflict
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27763
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 14:10:09 +0000 (14:10 +0000)]
Revert "Bugfix: Fix an accidentally commited merge conflict"
This reverts commit
62e93ea66236eb891a3a08849668a077753d0a56 .
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27762
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 14:09:05 +0000 (14:09 +0000)]
Testsuite: Port some tests to the CMake style config.h.in
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27761
0785d39b -7218-0410-832d-
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maier [Wed, 5 Dec 2012 14:09:04 +0000 (14:09 +0000)]
Bugfix: Fix an accidentally commited merge conflict
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27760
0785d39b -7218-0410-832d-
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maier [Tue, 4 Dec 2012 22:57:06 +0000 (22:57 +0000)]
Merge from Mainline
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27759
0785d39b -7218-0410-832d-
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maier [Tue, 4 Dec 2012 22:46:55 +0000 (22:46 +0000)]
Add a test for GeometryInfo<dim>::face_to_cell_vertices and face_to_cell_lines
git-svn-id: https://svn.dealii.org/trunk@27758
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maier [Tue, 4 Dec 2012 22:46:53 +0000 (22:46 +0000)]
Bugfix: Implement correct return values for ->face_flip and ->face_rotation in 1d and 2d
This fixes a regression introduced with r27714 which made
GeometryInfo<2>::child_cell_on_face face_flip aware in 2d.
git-svn-id: https://svn.dealii.org/trunk@27757
0785d39b -7218-0410-832d-
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kanschat [Tue, 4 Dec 2012 17:56:36 +0000 (17:56 +0000)]
more big output files removed
git-svn-id: https://svn.dealii.org/trunk@27756
0785d39b -7218-0410-832d-
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