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https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Wed, 2 Oct 2013 15:06:52 +0000 (15:06 +0000)]
Make it compile.
git-svn-id: https://svn.dealii.org/trunk@31069
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Wolfgang Bangerth [Wed, 2 Oct 2013 15:03:54 +0000 (15:03 +0000)]
Slightly more documentation. Leave a few TODOs in the introduction.
git-svn-id: https://svn.dealii.org/trunk@31068
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Matthias Maier [Wed, 2 Oct 2013 00:47:35 +0000 (00:47 +0000)]
Cherry-pick revisions 31065 and 31066 from branch_port_the_testsuite
git-svn-id: https://svn.dealii.org/trunk@31067
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Matthias Maier [Tue, 1 Oct 2013 21:35:48 +0000 (21:35 +0000)]
Port the distributed periodicity test, add missing template instantiation
git-svn-id: https://svn.dealii.org/trunk@31064
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Matthias Maier [Tue, 1 Oct 2013 21:35:47 +0000 (21:35 +0000)]
Port grid_tools_05.cc test to collect_periodic_faces
git-svn-id: https://svn.dealii.org/trunk@31063
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Wolfgang Bangerth [Tue, 1 Oct 2013 20:36:19 +0000 (20:36 +0000)]
Suppress warnings of the following kind:
..................
/.../deal.II/source/numerics/matrix_tools.cc(2088): warning #2536: type qualifiers are meaningless here
bool (*comp)(const typename SparseMatrix<number>::iterator::value_type p,
^
..................
Avoiding the 'const' here is not always completely possible in
template contexts, depending on whether 'value_type' already
has the 'const' in it or not.
git-svn-id: https://svn.dealii.org/trunk@31060
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Wolfgang Bangerth [Tue, 1 Oct 2013 18:49:50 +0000 (18:49 +0000)]
Improve error message.
git-svn-id: https://svn.dealii.org/trunk@31059
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Bruno Turcksin [Tue, 1 Oct 2013 17:12:43 +0000 (17:12 +0000)]
Fix a bug in graph coloring and add a test for it.
git-svn-id: https://svn.dealii.org/trunk@31058
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Martin Kronbichler [Tue, 1 Oct 2013 15:18:37 +0000 (15:18 +0000)]
Link in step-51 tutorial program.
git-svn-id: https://svn.dealii.org/trunk@31057
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Wolfgang Bangerth [Tue, 1 Oct 2013 00:25:23 +0000 (00:25 +0000)]
Do some operations in parallel on tasks.
git-svn-id: https://svn.dealii.org/trunk@31055
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Wolfgang Bangerth [Tue, 1 Oct 2013 00:24:55 +0000 (00:24 +0000)]
Work around an issue in a copy constructor we needed for C++11 compatibility and Intel's ICC.
git-svn-id: https://svn.dealii.org/trunk@31054
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Matthias Maier [Mon, 30 Sep 2013 23:49:41 +0000 (23:49 +0000)]
Take over revisions 31045 - 31051 from branch_port_the_testsuite
Cleanup GridTools::collect_periodic_*:
- Remove GridTools::collect_periodic_face_pairs
- Unify interface for remaining GridTools::collect_periodic_faces
- Remove deprecated functions that aren't even released
- Bugfix: Instantiate collect_periodic_faces, this resolves a compilation
issue with icc
git-svn-id: https://svn.dealii.org/trunk@31052
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Wolfgang Bangerth [Mon, 30 Sep 2013 22:40:01 +0000 (22:40 +0000)]
Fix a couple of assertions.
git-svn-id: https://svn.dealii.org/trunk@31047
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Wolfgang Bangerth [Mon, 30 Sep 2013 18:40:42 +0000 (18:40 +0000)]
Disable warning 327 for Intel compilers. This leads to (correct)
warnings of the kind
File: source/fe/fe_values.cc Line: 430
/.../deal.II/source/fe/fe_values.cc(430): warning #327: NULL reference is not allowed
fe_values(*static_cast<dealii::FEValuesBase<dim, spacedim>*> (0)),
^
detected during instantiation of "dealii::FEValuesViews::Tensor<2, dim, spacedim>::Tensor() [with dim=1, spacedim=1]" at line 76 of "/usr/include/c++/4.6/bits/stl_construct.h"
But we'd like to use this construct anyway.
git-svn-id: https://svn.dealii.org/trunk@31043
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Wolfgang Bangerth [Mon, 30 Sep 2013 15:45:54 +0000 (15:45 +0000)]
Provide a copy constructor.
git-svn-id: https://svn.dealii.org/trunk@31041
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Wolfgang Bangerth [Mon, 30 Sep 2013 14:36:13 +0000 (14:36 +0000)]
Leave a TODO.
git-svn-id: https://svn.dealii.org/trunk@31037
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Wolfgang Bangerth [Mon, 30 Sep 2013 14:15:20 +0000 (14:15 +0000)]
Add a copy constructor in hopes of making Intel's ICC happy.
git-svn-id: https://svn.dealii.org/trunk@31036
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:38:56 +0000 (13:38 +0000)]
Suppress output to console.
git-svn-id: https://svn.dealii.org/trunk@31033
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:36:31 +0000 (13:36 +0000)]
Move declaration of std::vector out of a loop.
git-svn-id: https://svn.dealii.org/trunk@31032
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:32:52 +0000 (13:32 +0000)]
Try to make older gccs happy.
git-svn-id: https://svn.dealii.org/trunk@31030
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:26:55 +0000 (13:26 +0000)]
Provide a copy constructor for the Task class. This should make
Intel ICC happy.
git-svn-id: https://svn.dealii.org/trunk@31029
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:26:36 +0000 (13:26 +0000)]
Provide a copy constructor for the accessor class. This should make
Intel ICC happy.
git-svn-id: https://svn.dealii.org/trunk@31028
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Wolfgang Bangerth [Mon, 30 Sep 2013 13:16:11 +0000 (13:16 +0000)]
Move comment into the right place.
git-svn-id: https://svn.dealii.org/trunk@31027
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Wolfgang Bangerth [Mon, 30 Sep 2013 03:52:45 +0000 (03:52 +0000)]
Document geometry generation.
git-svn-id: https://svn.dealii.org/trunk@31025
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Wolfgang Bangerth [Mon, 30 Sep 2013 03:39:53 +0000 (03:39 +0000)]
Some more updates.
git-svn-id: https://svn.dealii.org/trunk@31024
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Timo Heister [Mon, 30 Sep 2013 01:16:24 +0000 (01:16 +0000)]
change const bool& parameter to not be a reference in write_hdf5_parallel
git-svn-id: https://svn.dealii.org/trunk@31023
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Timo Heister [Mon, 30 Sep 2013 00:50:21 +0000 (00:50 +0000)]
remove hdf5 related compiler warning
git-svn-id: https://svn.dealii.org/trunk@31022
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Scott Miller [Mon, 30 Sep 2013 00:13:51 +0000 (00:13 +0000)]
Fix typo in documentation.
git-svn-id: https://svn.dealii.org/trunk@31021
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Wolfgang Bangerth [Sun, 29 Sep 2013 23:19:32 +0000 (23:19 +0000)]
Try to align instantiations to declarations, in hopes of fixing bug #122.
git-svn-id: https://svn.dealii.org/trunk@31020
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Wolfgang Bangerth [Sun, 29 Sep 2013 23:18:26 +0000 (23:18 +0000)]
Provide copy constructors for iterators.
git-svn-id: https://svn.dealii.org/trunk@31019
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Wolfgang Bangerth [Sun, 29 Sep 2013 22:55:32 +0000 (22:55 +0000)]
More small mods.
git-svn-id: https://svn.dealii.org/trunk@31018
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Wolfgang Bangerth [Sun, 29 Sep 2013 22:44:59 +0000 (22:44 +0000)]
Further cleanups.
git-svn-id: https://svn.dealii.org/trunk@31017
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Wolfgang Bangerth [Sun, 29 Sep 2013 18:48:12 +0000 (18:48 +0000)]
Clean up member variable list somewhat. As far as possible, initialize member variables in the initializer list and then mark them as const.
git-svn-id: https://svn.dealii.org/trunk@31013
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Wolfgang Bangerth [Sun, 29 Sep 2013 14:58:31 +0000 (14:58 +0000)]
Add a few comments. Fix a couple of oversights where the same function is used for both cell integrals and boundary integrals (though the evaluated function values are, in fact, only used for the boundary integrals).
git-svn-id: https://svn.dealii.org/trunk@31011
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Joerg Frohne [Sat, 28 Sep 2013 23:20:10 +0000 (23:20 +0000)]
fix sphere obstacle function
git-svn-id: https://svn.dealii.org/trunk@31009
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Wolfgang Bangerth [Sat, 28 Sep 2013 21:55:29 +0000 (21:55 +0000)]
Add a newline to the end of the file, as mandated by the C++ standard.
git-svn-id: https://svn.dealii.org/trunk@31006
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Wolfgang Bangerth [Sat, 28 Sep 2013 21:55:12 +0000 (21:55 +0000)]
Add a newline to the end of the file, as mandated by the C++ standard.
git-svn-id: https://svn.dealii.org/trunk@31005
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Wolfgang Bangerth [Sat, 28 Sep 2013 21:42:33 +0000 (21:42 +0000)]
Make compile with 64-bit.
git-svn-id: https://svn.dealii.org/trunk@31003
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Wolfgang Bangerth [Sat, 28 Sep 2013 11:59:19 +0000 (11:59 +0000)]
More minor changes.
git-svn-id: https://svn.dealii.org/trunk@30999
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Wolfgang Bangerth [Sat, 28 Sep 2013 11:40:39 +0000 (11:40 +0000)]
Slightly more cleanup.
git-svn-id: https://svn.dealii.org/trunk@30998
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Eric Heien [Fri, 27 Sep 2013 23:48:07 +0000 (23:48 +0000)]
Added DataOutFilter class to remove duplicate vertices/values and serialization for XDMFEntry class
git-svn-id: https://svn.dealii.org/trunk@30991
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Wolfgang Bangerth [Fri, 27 Sep 2013 20:57:56 +0000 (20:57 +0000)]
Reindent.
git-svn-id: https://svn.dealii.org/trunk@30990
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Wolfgang Bangerth [Fri, 27 Sep 2013 20:56:43 +0000 (20:56 +0000)]
Rename a couple of things.
git-svn-id: https://svn.dealii.org/trunk@30989
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Wolfgang Bangerth [Fri, 27 Sep 2013 20:54:58 +0000 (20:54 +0000)]
Update.
git-svn-id: https://svn.dealii.org/trunk@30988
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Wolfgang Bangerth [Fri, 27 Sep 2013 20:49:39 +0000 (20:49 +0000)]
Move around a bit of stuff. More documentation.
git-svn-id: https://svn.dealii.org/trunk@30987
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Wolfgang Bangerth [Fri, 27 Sep 2013 13:10:22 +0000 (13:10 +0000)]
Move initialization of obstacle into constructor of main class.
git-svn-id: https://svn.dealii.org/trunk@30984
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Wolfgang Bangerth [Fri, 27 Sep 2013 13:04:43 +0000 (13:04 +0000)]
Let the main class only store a pointer to the obstacle, not the object that reads in the file.
git-svn-id: https://svn.dealii.org/trunk@30981
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Wolfgang Bangerth [Fri, 27 Sep 2013 13:02:54 +0000 (13:02 +0000)]
add
git-svn-id: https://svn.dealii.org/trunk@30980
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Matthias Maier [Fri, 27 Sep 2013 12:49:42 +0000 (12:49 +0000)]
CMake: Bugfix - nice try...
git-svn-id: https://svn.dealii.org/trunk@30978
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Timo Heister [Fri, 27 Sep 2013 12:48:12 +0000 (12:48 +0000)]
fix crash in ConstraintMatrix constructor taking IndexSet (release mode only)
git-svn-id: https://svn.dealii.org/trunk@30977
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Matthias Maier [Fri, 27 Sep 2013 12:43:26 +0000 (12:43 +0000)]
CMake: Bugfix: Also include 3rd party include directories in FindPETSC.conf
It is really necessary to use all exported include directories from a PETSc
installation.
git-svn-id: https://svn.dealii.org/trunk@30975
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Wolfgang Bangerth [Fri, 27 Sep 2013 12:34:23 +0000 (12:34 +0000)]
Avoid infinite loop.
git-svn-id: https://svn.dealii.org/trunk@30973
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Wolfgang Bangerth [Fri, 27 Sep 2013 12:21:55 +0000 (12:21 +0000)]
Make compile again.
git-svn-id: https://svn.dealii.org/trunk@30972
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Joerg Frohne [Thu, 26 Sep 2013 21:39:35 +0000 (21:39 +0000)]
small change in update_solution_and_constraints
git-svn-id: https://svn.dealii.org/trunk@30971
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Bruno Turcksin [Thu, 26 Sep 2013 20:37:50 +0000 (20:37 +0000)]
Use std_cxx1x::function for graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30970
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Guido Kanschat [Thu, 26 Sep 2013 18:42:50 +0000 (18:42 +0000)]
fix elasticity test
git-svn-id: https://svn.dealii.org/trunk@30964
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Guido Kanschat [Thu, 26 Sep 2013 18:42:28 +0000 (18:42 +0000)]
new residual Divergence::u_times_n\
fixed elasticity residuals
git-svn-id: https://svn.dealii.org/trunk@30963
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Guido Kanschat [Thu, 26 Sep 2013 15:49:18 +0000 (15:49 +0000)]
fix typo
git-svn-id: https://svn.dealii.org/trunk@30961
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Joerg Frohne [Thu, 26 Sep 2013 15:26:10 +0000 (15:26 +0000)]
splitting obstacle class into two classes
git-svn-id: https://svn.dealii.org/trunk@30959
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Felix Gruber [Thu, 26 Sep 2013 12:24:50 +0000 (12:24 +0000)]
doc/users: fix some broken links
git-svn-id: https://svn.dealii.org/trunk@30950
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Matthias Maier [Thu, 26 Sep 2013 09:28:52 +0000 (09:28 +0000)]
Fix a lot of links
git-svn-id: https://svn.dealii.org/trunk@30945
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Matthias Maier [Thu, 26 Sep 2013 09:18:00 +0000 (09:18 +0000)]
Add a second link for the reports
git-svn-id: https://svn.dealii.org/trunk@30944
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Matthias Maier [Thu, 26 Sep 2013 09:15:15 +0000 (09:15 +0000)]
Fix typos
git-svn-id: https://svn.dealii.org/trunk@30943
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Guido Kanschat [Thu, 26 Sep 2013 08:58:02 +0000 (08:58 +0000)]
advection residuals fixed
git-svn-id: https://svn.dealii.org/trunk@30942
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Guido Kanschat [Thu, 26 Sep 2013 08:19:33 +0000 (08:19 +0000)]
weak residuals
git-svn-id: https://svn.dealii.org/trunk@30941
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Wolfgang Bangerth [Thu, 26 Sep 2013 01:22:38 +0000 (01:22 +0000)]
Fix name of type...
git-svn-id: https://svn.dealii.org/trunk@30939
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Wolfgang Bangerth [Wed, 25 Sep 2013 22:49:59 +0000 (22:49 +0000)]
Use types::global_dof_indices.
git-svn-id: https://svn.dealii.org/trunk@30931
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Wolfgang Bangerth [Wed, 25 Sep 2013 22:48:53 +0000 (22:48 +0000)]
Use types::global_dof_indices.
git-svn-id: https://svn.dealii.org/trunk@30930
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Matthias Maier [Wed, 25 Sep 2013 22:33:26 +0000 (22:33 +0000)]
The big documentation overhaul
git-svn-id: https://svn.dealii.org/trunk@30929
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Matthias Maier [Wed, 25 Sep 2013 20:30:34 +0000 (20:30 +0000)]
Finish documentation
git-svn-id: https://svn.dealii.org/trunk@30925
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Bruno Turcksin [Wed, 25 Sep 2013 17:28:47 +0000 (17:28 +0000)]
Fix a bug in work_stream when using graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30922
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Bruno Turcksin [Wed, 25 Sep 2013 16:12:27 +0000 (16:12 +0000)]
Use graph coloring whith work_stream.
git-svn-id: https://svn.dealii.org/trunk@30921
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Wolfgang Bangerth [Wed, 25 Sep 2013 14:57:51 +0000 (14:57 +0000)]
Add note about yesterday's change to PETSc wrappers.
git-svn-id: https://svn.dealii.org/trunk@30920
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Scott Miller [Wed, 25 Sep 2013 12:44:32 +0000 (12:44 +0000)]
Fix typo in documentation.
git-svn-id: https://svn.dealii.org/trunk@30919
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Wolfgang Bangerth [Tue, 24 Sep 2013 18:25:07 +0000 (18:25 +0000)]
Avoid outputting 'number-number' since ./normalize might turn that into numbernumber if the second number just so happens to be zero -- and then consequently completely confuse numdiff.
git-svn-id: https://svn.dealii.org/trunk@30917
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Wolfgang Bangerth [Tue, 24 Sep 2013 18:12:47 +0000 (18:12 +0000)]
Work around a change in PETSc 3.4.
git-svn-id: https://svn.dealii.org/trunk@30916
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Guido Kanschat [Tue, 24 Sep 2013 16:12:47 +0000 (16:12 +0000)]
instantiate selectors for const vectors
git-svn-id: https://svn.dealii.org/trunk@30915
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Daniel Arndt [Tue, 24 Sep 2013 14:37:29 +0000 (14:37 +0000)]
Fixed bug in add_periodicity. There were errors when the mesh is not immediately refined.
git-svn-id: https://svn.dealii.org/trunk@30914
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Guido Kanschat [Tue, 24 Sep 2013 09:04:36 +0000 (09:04 +0000)]
add homogeneous boundary operator
git-svn-id: https://svn.dealii.org/trunk@30907
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Wolfgang Bangerth [Tue, 24 Sep 2013 00:35:14 +0000 (00:35 +0000)]
More work.
git-svn-id: https://svn.dealii.org/trunk@30903
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Wolfgang Bangerth [Mon, 23 Sep 2013 23:56:21 +0000 (23:56 +0000)]
Some more work.
git-svn-id: https://svn.dealii.org/trunk@30902
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Wolfgang Bangerth [Mon, 23 Sep 2013 21:15:23 +0000 (21:15 +0000)]
More small rewrites.
git-svn-id: https://svn.dealii.org/trunk@30901
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Wolfgang Bangerth [Mon, 23 Sep 2013 16:11:26 +0000 (16:11 +0000)]
Resize picture.
git-svn-id: https://svn.dealii.org/trunk@30900
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Wolfgang Bangerth [Mon, 23 Sep 2013 15:58:51 +0000 (15:58 +0000)]
Use pictures from the central repository.
git-svn-id: https://svn.dealii.org/trunk@30898
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Wolfgang Bangerth [Mon, 23 Sep 2013 15:58:27 +0000 (15:58 +0000)]
More editing. Return some values rather than having functions have several output arguments.
git-svn-id: https://svn.dealii.org/trunk@30897
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Wolfgang Bangerth [Mon, 23 Sep 2013 15:48:30 +0000 (15:48 +0000)]
Remove the original tex version of the introduction.
git-svn-id: https://svn.dealii.org/trunk@30896
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Matthias Maier [Mon, 23 Sep 2013 15:23:24 +0000 (15:23 +0000)]
Remove the out-of-source check from DEAL_II_INVOKE_AUTOPILOT
git-svn-id: https://svn.dealii.org/trunk@30895
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Scott Miller [Mon, 23 Sep 2013 14:02:09 +0000 (14:02 +0000)]
Fix typos and set diffusion in step-51.
git-svn-id: https://svn.dealii.org/trunk@30894
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Wolfgang Bangerth [Mon, 23 Sep 2013 13:41:10 +0000 (13:41 +0000)]
Use standard indentation scheme.
git-svn-id: https://svn.dealii.org/trunk@30893
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Wolfgang Bangerth [Mon, 23 Sep 2013 13:39:34 +0000 (13:39 +0000)]
Minor edits.
git-svn-id: https://svn.dealii.org/trunk@30892
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Wolfgang Bangerth [Mon, 23 Sep 2013 13:39:18 +0000 (13:39 +0000)]
Rename images to standard naming scheme. Add the image that describes the obstacle.
git-svn-id: https://svn.dealii.org/trunk@30891
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Wolfgang Bangerth [Mon, 23 Sep 2013 03:18:31 +0000 (03:18 +0000)]
Work on the introduction.
git-svn-id: https://svn.dealii.org/trunk@30890
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Fahad Alrashed [Sat, 21 Sep 2013 16:23:32 +0000 (16:23 +0000)]
modified dealii/data_out.cc to test both write_visit_record functions
git-svn-id: https://svn.dealii.org/trunk@30888
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Fahad Alrashed [Sat, 21 Sep 2013 16:05:02 +0000 (16:05 +0000)]
forgot to add a new entry in changes.h
git-svn-id: https://svn.dealii.org/trunk@30887
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Fahad Alrashed [Sat, 21 Sep 2013 15:52:05 +0000 (15:52 +0000)]
added write_visit_record that allows for multiple blocks and more than one time step
git-svn-id: https://svn.dealii.org/trunk@30886
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Wolfgang Bangerth [Sat, 21 Sep 2013 12:29:40 +0000 (12:29 +0000)]
Fix grammar of message.
git-svn-id: https://svn.dealii.org/trunk@30885
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Wolfgang Bangerth [Sat, 21 Sep 2013 12:03:54 +0000 (12:03 +0000)]
Minor markup improvements.
git-svn-id: https://svn.dealii.org/trunk@30884
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Wolfgang Bangerth [Sat, 21 Sep 2013 12:03:40 +0000 (12:03 +0000)]
Fix leftover note.
git-svn-id: https://svn.dealii.org/trunk@30883
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Wolfgang Bangerth [Fri, 20 Sep 2013 23:12:29 +0000 (23:12 +0000)]
Fix two tests.
git-svn-id: https://svn.dealii.org/trunk@30878
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Wolfgang Bangerth [Fri, 20 Sep 2013 23:00:53 +0000 (23:00 +0000)]
Add an instantiation that was previous missing in optimized mode.
git-svn-id: https://svn.dealii.org/trunk@30877
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