]>
https://gitweb.dealii.org/ - dealii.git/log
Timo Heister [Thu, 30 Mar 2017 21:37:53 +0000 (17:37 -0400)]
fix cmake regex for finding MPI version
cmake regex is greedy, which means that the old regex
MPI_VERSION.*([0-9]+)
would only put the last digit of the version into the group \1 because
.* consumes the others. Fix this.
David Wells [Fri, 31 Mar 2017 03:40:28 +0000 (23:40 -0400)]
Merge pull request #4161 from tamiko/pr_4160-8.5
[8.5] Examples: Require MPI for step-18
Matthias Maier [Thu, 30 Mar 2017 23:28:12 +0000 (18:28 -0500)]
Merge pull request #4154 from tjhei/r_8_5_pr4152
[8.5] take over #4152: fix step-55
Matthias Maier [Thu, 30 Mar 2017 23:23:02 +0000 (18:23 -0500)]
Examples: Require MPI for step-18
Timo Heister [Thu, 30 Mar 2017 19:09:45 +0000 (15:09 -0400)]
fix step-55
This causes crashes with PETSc and solver convergence issues with
Trilinos with more than one rank.
Matthias Maier [Thu, 30 Mar 2017 19:03:30 +0000 (14:03 -0500)]
Merge pull request #4148 from tamiko/cmake_2.8.8_compatibility
CMake: Compatibility with 2.8.8, do not build examples per default
Matthias Maier [Thu, 30 Mar 2017 16:45:54 +0000 (11:45 -0500)]
CMake: Default to not building examples
Matthias Maier [Thu, 30 Mar 2017 16:40:57 +0000 (11:40 -0500)]
CMake: Bugfix: Ensure compatibility with cmake-2.8.8
Timo Heister [Thu, 30 Mar 2017 14:42:51 +0000 (10:42 -0400)]
Merge pull request #4144 from kronbichler/take_over_documentation
[8.5] Take over #4138: Update documentation of FEEvaluation
Martin Kronbichler [Thu, 30 Mar 2017 08:49:04 +0000 (10:49 +0200)]
Update documentation of FEEvaluation
Wolfgang Bangerth [Wed, 29 Mar 2017 13:18:56 +0000 (07:18 -0600)]
Merge pull request #4137 from drwells/fix-double-angle-bracket
Convert a template '>>' to a '> >'.
David Wells [Wed, 29 Mar 2017 13:06:25 +0000 (09:06 -0400)]
Convert a template '>>' to a '> >'.
Wolfgang Bangerth [Wed, 29 Mar 2017 12:11:57 +0000 (06:11 -0600)]
Merge pull request #4136 from masterleinad/takeover_astyle
[8.5] take over #4125: Update documentation on location of astyle.rc.
Wolfgang Bangerth [Wed, 29 Mar 2017 12:11:31 +0000 (06:11 -0600)]
Merge pull request #4135 from masterleinad/takeover_abf_03
[8.5] take over #4134: Fix test on some platforms
Simon Sticko [Tue, 28 Mar 2017 07:13:03 +0000 (09:13 +0200)]
Update documentation on location of astyle.rc.
Martin Kronbichler [Wed, 29 Mar 2017 07:18:55 +0000 (09:18 +0200)]
Fix test on some platforms
Daniel Arndt [Wed, 29 Mar 2017 00:14:27 +0000 (02:14 +0200)]
Merge pull request #4132 from drwells/fix-quick-tests-8.5
[8.5] take over #4131: Remove tests.h dependency from the quick tests.
David Wells [Tue, 28 Mar 2017 21:03:55 +0000 (17:03 -0400)]
Remove tests.h dependency from the quick tests.
The release candidates ship without this file.
Matthias Maier [Tue, 28 Mar 2017 17:01:43 +0000 (12:01 -0500)]
Merge pull request #4129 from drwells/add-user-version-flag
Always add the user version flag.
Martin Kronbichler [Tue, 28 Mar 2017 16:51:59 +0000 (18:51 +0200)]
Merge pull request #4130 from tjhei/r_8_5_pr4127
[8.5] take over #4127: Fix bug in matrix-free evaluation kernel for degree 9 in 2D
Martin Kronbichler [Tue, 28 Mar 2017 14:08:07 +0000 (16:08 +0200)]
Make the stack size selection a single parameter
Martin Kronbichler [Tue, 28 Mar 2017 10:11:49 +0000 (12:11 +0200)]
Fix bug in matrix-free evaluation kernel for degree 9 in 2D
David Wells [Tue, 28 Mar 2017 16:16:18 +0000 (12:16 -0400)]
Always add the user version flag.
This gets around a bug where, if a user requests '-std=c++03' and is using a
compiler which defaults to C++11 or newer (e.g., GCC 6) then the library is
compiled with the default language flag (e.g., gnu++14) but
DEAL_II_WITH_CXX11=OFF: this causes compilation errors with boost::optional.
Wolfgang Bangerth [Mon, 27 Mar 2017 21:48:35 +0000 (15:48 -0600)]
Merge pull request #4124 from tjhei/r_8_5_pr4122
[8.5] take over #4122: Avoid multiple deprecation warnings in steps
Timo Heister [Mon, 27 Mar 2017 19:32:56 +0000 (15:32 -0400)]
fix step-41 warning
Timo Heister [Mon, 27 Mar 2017 19:16:41 +0000 (15:16 -0400)]
Avoid multigrid deprecation warnings in step-16/39
Wolfgang Bangerth [Mon, 27 Mar 2017 18:47:59 +0000 (12:47 -0600)]
Merge pull request #4121 from tjhei/p8.5-doxygen
[8.5] fix doxygen errors
Timo Heister [Mon, 27 Mar 2017 18:43:09 +0000 (14:43 -0400)]
fix doxygen errors
Daniel Arndt [Mon, 27 Mar 2017 12:20:57 +0000 (14:20 +0200)]
Merge pull request #4118 from tamiko/remove_cuda
[8.5] CMake: Remove CUDA feature
Matthias Maier [Mon, 27 Mar 2017 01:41:28 +0000 (20:41 -0500)]
CMake: Remove CUDA feature
Daniel Arndt [Sun, 26 Mar 2017 21:58:56 +0000 (23:58 +0200)]
Merge pull request #4116 from bangerth/fix-abf-02
Fix FE_ABF::convert_generalized_support_point_values_to_nodal_values
Daniel Arndt [Sun, 26 Mar 2017 15:44:07 +0000 (17:44 +0200)]
Fix FE_ABF::convert_generalized_support_point_values_to_nodal_values
Timo Heister [Fri, 24 Mar 2017 21:26:53 +0000 (17:26 -0400)]
removed unfinished steps (release tasks step 8).
Timo Heister [Fri, 24 Mar 2017 21:04:01 +0000 (17:04 -0400)]
add AUTHORS
Wolfgang Bangerth [Fri, 24 Mar 2017 15:02:01 +0000 (09:02 -0600)]
Merge pull request #4112 from tjhei/r85_pr4108
[for 8.5] take over #4108: Make sure to clean all data before filling MG transfer data fields
Martin Kronbichler [Fri, 24 Mar 2017 08:55:25 +0000 (09:55 +0100)]
Make sure to clean all data before filling MG transfer data fields
Timo Heister [Thu, 23 Mar 2017 19:15:14 +0000 (15:15 -0400)]
update VERSION
Wolfgang Bangerth [Thu, 23 Mar 2017 18:40:24 +0000 (12:40 -0600)]
Merge pull request #4099 from tjhei/doxygen_fixes
8.5 task: doxygen formatting fixes
Wolfgang Bangerth [Thu, 23 Mar 2017 16:29:02 +0000 (10:29 -0600)]
Merge pull request #4100 from tjhei/tag_filename
8.5 task: update TAG file URL
Timo Heister [Thu, 23 Mar 2017 16:28:29 +0000 (12:28 -0400)]
address comment
Timo Heister [Thu, 23 Mar 2017 16:23:39 +0000 (12:23 -0400)]
Merge pull request #4098 from bangerth/update-changes-file
Replace individual files by one changelog for the whole release.
Wolfgang Bangerth [Thu, 23 Mar 2017 16:15:02 +0000 (10:15 -0600)]
Adjust for the upcoming release.
Wolfgang Bangerth [Thu, 23 Mar 2017 15:55:43 +0000 (09:55 -0600)]
Remove now obsolete files.
Wolfgang Bangerth [Thu, 23 Mar 2017 15:56:54 +0000 (09:56 -0600)]
Update the changelog file for the release.
Timo Heister [Thu, 23 Mar 2017 16:14:20 +0000 (12:14 -0400)]
Merge pull request #4101 from bangerth/update-copyright
Update copyright years.
Wolfgang Bangerth [Thu, 23 Mar 2017 16:08:23 +0000 (10:08 -0600)]
Update copyright years.
Timo Heister [Thu, 23 Mar 2017 16:07:21 +0000 (12:07 -0400)]
8.5 task: update TAG file URL
Daniel Arndt [Thu, 23 Mar 2017 16:02:10 +0000 (17:02 +0100)]
Merge pull request #4097 from masterleinad/check_cell_loop
Check array access in MatrixFree::cell_loop
Timo Heister [Thu, 23 Mar 2017 15:57:07 +0000 (11:57 -0400)]
doxygen formatting fixes
- wrong indentation
- code blocks not marked correctly
- some @ref fixes
Daniel Arndt [Thu, 23 Mar 2017 14:39:49 +0000 (15:39 +0100)]
Check array access in MatrixFree::cell_loop
Timo Heister [Thu, 23 Mar 2017 13:44:04 +0000 (09:44 -0400)]
Merge pull request #4096 from kronbichler/fix_clang_warning_mapping
Fix warning with clang compiler
Luca Heltai [Thu, 23 Mar 2017 12:32:30 +0000 (13:32 +0100)]
Merge pull request #4064 from bangerth/replace-FE_interpolate
Replace FE::interpolate() by FE::convert_support_point_values_to_nodal_values().
Martin Kronbichler [Thu, 23 Mar 2017 12:23:21 +0000 (13:23 +0100)]
Add warning with clang compiler
Wolfgang Bangerth [Wed, 22 Mar 2017 21:49:17 +0000 (15:49 -0600)]
Merge pull request #3886 from kronbichler/master
Fix support points on quad for MappingQGeneric and StraightBoundary.
Wolfgang Bangerth [Wed, 22 Mar 2017 21:34:46 +0000 (15:34 -0600)]
Merge pull request #4094 from masterleinad/fix_indexset_asc_etc
Refactor and fix IndexSet::is_ascending_and_one_to_one
Timo Heister [Wed, 22 Mar 2017 20:53:14 +0000 (16:53 -0400)]
Merge pull request #4095 from masterleinad/fix_sparsity_compress
Check access in SparsityPatter::compress()
Luca Heltai [Wed, 22 Mar 2017 20:01:58 +0000 (21:01 +0100)]
Merge pull request #4091 from tamiko/opencascade_compatibility
Opencascade 7 fixes
Martin Kronbichler [Wed, 22 Mar 2017 19:20:30 +0000 (20:20 +0100)]
Work on review comments
Martin Kronbichler [Sun, 19 Mar 2017 09:16:53 +0000 (10:16 +0100)]
Performance improvements. Augment documentation.
Luca Heltai [Wed, 22 Mar 2017 18:45:37 +0000 (19:45 +0100)]
Fixed closest_point_to_shape.
Luca Heltai [Wed, 22 Mar 2017 18:39:40 +0000 (19:39 +0100)]
Fixed circle_normal_projection.
Daniel Arndt [Wed, 22 Mar 2017 18:11:52 +0000 (19:11 +0100)]
Check access in SparsityPatter::compress()
Daniel Arndt [Wed, 22 Mar 2017 17:17:06 +0000 (18:17 +0100)]
Refactor and fix IndexSet::is_ascending_ad_one_to_one
Matthias Maier [Wed, 22 Mar 2017 02:16:54 +0000 (21:16 -0500)]
CMake: Add TKSTEP209 to the opencascade link interface
Matthias Maier [Tue, 21 Mar 2017 19:34:16 +0000 (14:34 -0500)]
tests/opencascade: Fix two tests
Matthias Maier [Tue, 21 Mar 2017 19:08:39 +0000 (14:08 -0500)]
Add a changes.h entry
Matthias Maier [Tue, 21 Mar 2017 19:00:04 +0000 (14:00 -0500)]
CMake: Extract opencascade version in a more robust manner
Matthias Maier [Tue, 21 Mar 2017 18:53:38 +0000 (13:53 -0500)]
Opencascade: Add an include for version 7 compatibility
Matthias Maier [Tue, 21 Mar 2017 18:52:24 +0000 (13:52 -0500)]
Opencascade: Bugfix. Call Handle macro in a compatible fashion
Matthias Maier [Tue, 21 Mar 2017 18:51:15 +0000 (13:51 -0500)]
Opencascade: Fix includes for version 7
Matthias Maier [Tue, 21 Mar 2017 18:12:31 +0000 (13:12 -0500)]
CMake: Add include/opencascade to include path alternatives
Martin Kronbichler [Mon, 20 Mar 2017 10:46:01 +0000 (11:46 +0100)]
Merge pull request #4086 from bangerth/improve-exception
Improve the wording of an exception.
Daniel Arndt [Sun, 19 Mar 2017 21:39:25 +0000 (22:39 +0100)]
Merge pull request #4087 from bangerth/update-reference
Update the reference to a paper that has been accepted.
Wolfgang Bangerth [Sun, 19 Mar 2017 21:31:18 +0000 (15:31 -0600)]
Update the reference to a paper that has been accepted.
Wolfgang Bangerth [Sun, 19 Mar 2017 21:28:08 +0000 (15:28 -0600)]
Improve the wording of an exception.
Wolfgang Bangerth [Tue, 14 Mar 2017 13:30:44 +0000 (07:30 -0600)]
Rename variables in a function.
Match variable names at a calling site to the ones used in the called function.
Wolfgang Bangerth [Tue, 14 Mar 2017 00:46:45 +0000 (18:46 -0600)]
Use FE::convert_generalized_support_point_values_to_nodal_values().
Wolfgang Bangerth [Mon, 13 Mar 2017 23:41:06 +0000 (17:41 -0600)]
Implement the new FiniteElement::convert_generalized_support_point_values_to_nodal_values interface.
This is easily done by copying the implementation of the
existing FiniteElement::interpolate() functions in the
various derived classes, removing the 'offset' argument,
and reordering+renaming the other two arguments.
Wolfgang Bangerth [Fri, 24 Feb 2017 19:41:32 +0000 (12:41 -0700)]
Introduce FiniteElement::convert_generalized_support_point_values_to_nodal_values.
Wolfgang Bangerth [Sun, 19 Mar 2017 17:48:40 +0000 (11:48 -0600)]
Merge pull request #4082 from masterleinad/restrict_lapackfmprint
Restrict LAPACKFullMatrix::print_formatted to matrix states
Daniel Arndt [Sat, 18 Mar 2017 16:50:32 +0000 (17:50 +0100)]
Restrict LAPACKFullMatrix::print_formatted to matrix states
Martin Kronbichler [Sun, 19 Mar 2017 09:32:40 +0000 (10:32 +0100)]
Merge pull request #4080 from tjhei/fe_field_func_parallel
Fix FEFieldFunction behavior for nonlocal cells
Martin Kronbichler [Sun, 19 Mar 2017 09:29:02 +0000 (10:29 +0100)]
Merge pull request #4083 from drwells/other-coverity-fixes
Other coverity fixes
Martin Kronbichler [Sun, 19 Mar 2017 09:16:41 +0000 (10:16 +0100)]
Add new test
Martin Kronbichler [Sun, 19 Mar 2017 06:54:46 +0000 (07:54 +0100)]
Add changelog
Martin Kronbichler [Fri, 17 Mar 2017 14:21:31 +0000 (15:21 +0100)]
Unify interpolation from surrounding points.
Query multiple points from mapping.
Daniel Arndt [Sat, 18 Mar 2017 23:12:33 +0000 (00:12 +0100)]
Merge pull request #4084 from drwells/to-to-fixes
To to fixes
David Wells [Sat, 18 Mar 2017 21:37:55 +0000 (17:37 -0400)]
Fix a typo.
David Wells [Sat, 18 Mar 2017 21:36:48 +0000 (17:36 -0400)]
Clarify some sentences containing 'to to'.
David Wells [Sat, 18 Mar 2017 20:41:08 +0000 (16:41 -0400)]
Remove an unnecessary destructor implementation.
The default is equal to this.
David Wells [Thu, 16 Mar 2017 22:22:39 +0000 (18:22 -0400)]
Check that we successfully created a directory.
David Wells [Thu, 16 Mar 2017 22:22:27 +0000 (18:22 -0400)]
Catch an exception by reference.
David Wells [Thu, 16 Mar 2017 22:22:16 +0000 (18:22 -0400)]
Restore std::cout flags.
David Wells [Thu, 16 Mar 2017 22:21:14 +0000 (18:21 -0400)]
Initialize variables in step constructors.
Martin Kronbichler [Fri, 17 Mar 2017 14:20:39 +0000 (15:20 +0100)]
Add new function to query multiple points to Manifold
Martin Kronbichler [Fri, 3 Mar 2017 12:59:33 +0000 (13:59 +0100)]
Adjust test output
Timo Heister [Sat, 18 Mar 2017 17:54:19 +0000 (13:54 -0400)]
FEFieldFunction behavior for nonlocal cells
This fixes a bug in FEFieldFunction in several functions were it tries
to evaluate the function on an artificial cell and failing instead of
throwing ExcPointNotAvailableHere like it should. Fix this.
Martin Kronbichler [Wed, 1 Mar 2017 17:35:14 +0000 (18:35 +0100)]
Fix manifold code by introducing a new flag
Daniel Arndt [Sat, 18 Mar 2017 14:41:28 +0000 (15:41 +0100)]
Make errors more descriptive
Martin Kronbichler [Fri, 17 Mar 2017 16:47:39 +0000 (17:47 +0100)]
Merge pull request #4076 from masterleinad/more_coverity2
Fix various uninitialized and unused variables
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