https://gitweb.dealii.org/ - dealii-svn.git/log

]> https://gitweb.dealii.org/ - dealii-svn.git/log

heltai [Sun, 5 Dec 2010 15:03:14 +0000 (15:03 +0000)]

Added test for gradient differences on codim one surfaces.

git-svn-id: https://svn.dealii.org/trunk@22916 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 3 Dec 2010 22:53:42 +0000 (22:53 +0000)]

New test for PETSc vectors.

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heister [Fri, 3 Dec 2010 22:43:02 +0000 (22:43 +0000)]

Added a new constructor for PETScWrappers::Vector that takes an existing PETSc Vec that was created by the user and is only wrapped for usage.

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bangerth [Fri, 3 Dec 2010 19:18:50 +0000 (19:18 +0000)]

Also revert r22891 for the same reason. The changes that caused the failure were in configure.in/aclocal.m4 before that patch.

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bangerth [Fri, 3 Dec 2010 16:48:30 +0000 (16:48 +0000)]

Revert 22903 since it make the autotester choke.

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heltai [Fri, 3 Dec 2010 16:36:49 +0000 (16:36 +0000)]

Added tutorial step-38 on Laplace Beltrami Operator.

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heister [Fri, 3 Dec 2010 13:00:45 +0000 (13:00 +0000)]

improve formatting in tutorial overview.

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bangerth [Fri, 3 Dec 2010 05:09:13 +0000 (05:09 +0000)]

Discuss some more.

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bangerth [Fri, 3 Dec 2010 05:02:31 +0000 (05:02 +0000)]

Fix typo.

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bangerth [Thu, 2 Dec 2010 19:22:33 +0000 (19:22 +0000)]

Rather than clumsily computing derived quantities within the finite element spaces, use the DataPostprocessor facilities to do so. This also yields a nice implementation of the viscous heating terms.

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bangerth [Thu, 2 Dec 2010 16:47:07 +0000 (16:47 +0000)]

Whitespace changes.

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bangerth [Thu, 2 Dec 2010 16:45:55 +0000 (16:45 +0000)]

Make it follow usual style.

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bangerth [Thu, 2 Dec 2010 16:42:00 +0000 (16:42 +0000)]

Use better gravity model as described in the introduction. Allow graphical output also for more processors but more infrequently.

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bangerth [Thu, 2 Dec 2010 13:42:00 +0000 (13:42 +0000)]

Regenerate.

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heister [Thu, 2 Dec 2010 11:37:40 +0000 (11:37 +0000)]

improve PETSc compiler mismatch error messages.

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young [Thu, 2 Dec 2010 11:10:12 +0000 (11:10 +0000)]

Fix get compiler bug in mpi consistency for PETSc 2.3.x

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young [Thu, 2 Dec 2010 11:03:21 +0000 (11:03 +0000)]

Fix bug in mpi consistency for PETSc 2.3.x

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young [Thu, 2 Dec 2010 10:48:05 +0000 (10:48 +0000)]

Fix bug in mpi consistency for PETSc 2.3.x

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young [Thu, 2 Dec 2010 08:15:41 +0000 (08:15 +0000)]

Update news on publication

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bangerth [Thu, 2 Dec 2010 05:00:34 +0000 (05:00 +0000)]

A better gravity model.

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bangerth [Thu, 2 Dec 2010 00:34:04 +0000 (00:34 +0000)]

Clarify what I mean by center.

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bangerth [Thu, 2 Dec 2010 00:33:26 +0000 (00:33 +0000)]

Minor formula fix.

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bangerth [Wed, 1 Dec 2010 23:47:10 +0000 (23:47 +0000)]

Remove a lot of debug and timing output stuff.

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bangerth [Wed, 1 Dec 2010 20:21:18 +0000 (20:21 +0000)]

Fix a couple places that cppcheck marked up.

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bangerth [Wed, 1 Dec 2010 14:34:26 +0000 (14:34 +0000)]

Disable the following warning in xlC: 1540-2909 (W) The subscript 2 is out of range. The only valid subscript is 0.

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bangerth [Wed, 1 Dec 2010 14:27:37 +0000 (14:27 +0000)]

Using --without-umfpack is equivalent to --with-umfpack=no and made ./configure believe that we should look for an external umfpack version at path 'no'.

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bangerth [Tue, 30 Nov 2010 16:59:19 +0000 (16:59 +0000)]

Remove various benchmarking features.

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young [Tue, 30 Nov 2010 10:33:04 +0000 (10:33 +0000)]

Fix missing block for doxygen

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bangerth [Tue, 30 Nov 2010 04:52:18 +0000 (04:52 +0000)]

Add a missing instantiation.

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bangerth [Tue, 30 Nov 2010 04:45:36 +0000 (04:45 +0000)]

Initialize member variable to avoid warning by ICC.

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bangerth [Mon, 29 Nov 2010 23:48:38 +0000 (23:48 +0000)]

The intel compiler wants us to initialize each const member.

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bangerth [Mon, 29 Nov 2010 21:56:40 +0000 (21:56 +0000)]

Also instantiate the dummy parallel::distributed::Triangulation class when not using p4est so that icc doesn't complain about missing typeinfo symbols.

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bangerth [Mon, 29 Nov 2010 21:34:27 +0000 (21:34 +0000)]

Really only instantiate functions that aren't explicitly specialized.

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bangerth [Mon, 29 Nov 2010 21:24:09 +0000 (21:24 +0000)]

Do not include functions in explicit instantiations that are explicitly specialized.

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bangerth [Mon, 29 Nov 2010 20:10:43 +0000 (20:10 +0000)]

Fix table of contents; add one more sentence.

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kanschat [Mon, 29 Nov 2010 17:49:46 +0000 (17:49 +0000)]

adjust to moved operators

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kanschat [Mon, 29 Nov 2010 17:17:26 +0000 (17:17 +0000)]

move grad_div to Divergence

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kanschat [Mon, 29 Nov 2010 17:09:02 +0000 (17:09 +0000)]

mov Differential to more appropriate Divergence

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kanschat [Mon, 29 Nov 2010 17:06:44 +0000 (17:06 +0000)]

remove name tag

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buerg [Mon, 29 Nov 2010 17:06:16 +0000 (17:06 +0000)]

Delete shapes.cc

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buerg [Mon, 29 Nov 2010 17:01:11 +0000 (17:01 +0000)]

Splitting of the test fe/shapes due to run-time limitations.

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kanschat [Mon, 29 Nov 2010 16:49:16 +0000 (16:49 +0000)]

add normal fluxes and fix jump

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bangerth [Mon, 29 Nov 2010 15:30:26 +0000 (15:30 +0000)]

Add a note on the difference between using the symmetric gradient or the
straight one.

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young [Mon, 29 Nov 2010 10:52:39 +0000 (10:52 +0000)]

Check for MPI consistency between deal.II and PETSc. Note: This only does the check if MPI is requested at configure time, otherwise, check for PETSc's libmpiuni library

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kanschat [Mon, 29 Nov 2010 01:32:09 +0000 (01:32 +0000)]

update documentation

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kanschat [Sun, 28 Nov 2010 23:21:29 +0000 (23:21 +0000)]

cleanup

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kanschat [Sun, 28 Nov 2010 23:20:00 +0000 (23:20 +0000)]

add default constructor for MGDoFHandler

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kanschat [Sun, 28 Nov 2010 23:19:04 +0000 (23:19 +0000)]

begin operators for LDG

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kanschat [Sun, 28 Nov 2010 21:02:19 +0000 (21:02 +0000)]

Add some info on the notational conventions for integral operators

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kanschat [Sun, 28 Nov 2010 20:53:16 +0000 (20:53 +0000)]

use @ instead of \

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kanschat [Sun, 28 Nov 2010 20:47:29 +0000 (20:47 +0000)]

allow doxygen to find the symbol... although it is probably an undocumented class anyway

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kanschat [Sun, 28 Nov 2010 20:29:46 +0000 (20:29 +0000)]

mention namespaces in first paragraph

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bangerth [Sat, 27 Nov 2010 00:33:29 +0000 (00:33 +0000)]

Add a section on what happens when you try to synchronize tasks.

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bangerth [Sat, 27 Nov 2010 00:08:52 +0000 (00:08 +0000)]

Add a new test that currently deadlocks.

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kronbichler [Fri, 26 Nov 2010 14:43:55 +0000 (14:43 +0000)]

Trilinos vector reinit should now be safe also with MPI.

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kronbichler [Fri, 26 Nov 2010 14:36:05 +0000 (14:36 +0000)]

Undo patch 22849, i.e., now it is safe to nest tasks. However, do this only when there is enough to do so the task scheduling overhead doesn't matter.

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kronbichler [Fri, 26 Nov 2010 13:57:55 +0000 (13:57 +0000)]

Can not use mutex or condition variables when joining a task: If new tasks are scheduled but no free threads, the worker can never start, while the master is blocked. Let TBB handle the task management even in join().

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kanschat [Thu, 25 Nov 2010 17:03:16 +0000 (17:03 +0000)]

Add warning about nested ThreadGroup objects

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bangerth [Thu, 25 Nov 2010 05:00:53 +0000 (05:00 +0000)]

Remove files that have been pointless for quite a while now.

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bangerth [Wed, 24 Nov 2010 22:27:58 +0000 (22:27 +0000)]

Fix reference to man page.

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bangerth [Wed, 24 Nov 2010 20:25:38 +0000 (20:25 +0000)]

Trying to interpolate boundary values on a closed loop 1d mesh in 2d resulted in an infinite loop. This should now be fixed.

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bangerth [Wed, 24 Nov 2010 15:01:47 +0000 (15:01 +0000)]

Remove the Software doxygen module -- it was pretty outdated, and it duplicates the master copy of supported external software in the readme.html file.

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bangerth [Wed, 24 Nov 2010 14:50:46 +0000 (14:50 +0000)]

Reorder order of directories: in debug mode, these are the files with
the longest compute time:

0m13s lac/chunk_sparse_matrix.cc
0m14s numerics/derivative_approximation.cc
0m15s dofs/dof_renumbering.cc
0m15s fe/fe_tools.cc
0m15s numerics/mesh_worker_vector_selector.cc
0m16s grid/grid_tools.cc
0m16s numerics/error_estimator.cc
0m17s grid/tria.cc
0m21s numerics/solution_transfer.cc
0m23s dofs/dof_accessor.cc
0m28s lac/sparse_matrix.cc
0m31s dofs/dof_tools.cc
0m40s numerics/vectors.cc
0m52s fe/fe_values.cc
1m14s numerics/data_out.cc

In optimized mode it is this way:
0.27s dofs/dof_renumbering.cc
0.27s lac/precondition_block.cc
0.28s numerics/derivative_approximation.cc
0.28s numerics/mesh_worker_vector_selector.cc
0.32s base/data_out_base.cc
0.33s numerics/fe_field_function.cc
0.37s lac/chunk_sparse_matrix.cc
0.38s grid/tria.cc
0.45s lac/sparse_matrix.cc
0.49s numerics/error_estimator.cc
0.57s dofs/dof_accessor.cc
1.19s dofs/dof_tools.cc
1.28s numerics/data_out.cc
2.55s fe/fe_values.cc
3.31s numerics/vectors.cc

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bangerth [Wed, 24 Nov 2010 13:28:03 +0000 (13:28 +0000)]

Ugh, fix syntax.

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bangerth [Wed, 24 Nov 2010 13:16:41 +0000 (13:16 +0000)]

Fix grammar.

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bangerth [Wed, 24 Nov 2010 13:02:14 +0000 (13:02 +0000)]

Correctly qualify function.

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bangerth [Wed, 24 Nov 2010 13:00:20 +0000 (13:00 +0000)]

doxygen 1.7.2 no longer wants to create the output directory itself. Do so when necessary.

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salgado [Wed, 24 Nov 2010 03:57:08 +0000 (03:57 +0000)]

Guido & AJS fix. You cannot nest task loops

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bangerth [Wed, 24 Nov 2010 03:08:51 +0000 (03:08 +0000)]

Replace \vec by \mathbf consistently.

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bangerth [Wed, 24 Nov 2010 03:02:48 +0000 (03:02 +0000)]

Fix a couple markups.

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bangerth [Wed, 24 Nov 2010 02:54:00 +0000 (02:54 +0000)]

Add Chih-Che's comments.

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bangerth [Tue, 23 Nov 2010 04:34:25 +0000 (04:34 +0000)]

Add the actual file.

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bangerth [Tue, 23 Nov 2010 02:19:01 +0000 (02:19 +0000)]

Rename.

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bangerth [Tue, 23 Nov 2010 02:18:43 +0000 (02:18 +0000)]

Add.

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bangerth [Mon, 22 Nov 2010 23:55:08 +0000 (23:55 +0000)]

step-32 is not ready so far.

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bangerth [Mon, 22 Nov 2010 23:44:33 +0000 (23:44 +0000)]

Update after boost upgrade.

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bangerth [Mon, 22 Nov 2010 22:28:16 +0000 (22:28 +0000)]

Make sure the include/ directory is in the include path.

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bangerth [Mon, 22 Nov 2010 19:42:54 +0000 (19:42 +0000)]

Update after boost upgrade.

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bangerth [Mon, 22 Nov 2010 16:11:38 +0000 (16:11 +0000)]

Move into place.

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bangerth [Mon, 22 Nov 2010 15:34:32 +0000 (15:34 +0000)]

Remove old version of boost.

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bangerth [Mon, 22 Nov 2010 15:28:51 +0000 (15:28 +0000)]

Patches to avoid warnings and errors, some taken over from previous versions of BOOST in our tree, some new.

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bangerth [Mon, 22 Nov 2010 15:07:06 +0000 (15:07 +0000)]

add

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bangerth [Sun, 21 Nov 2010 02:47:43 +0000 (02:47 +0000)]

A couple more tests.

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bangerth [Sun, 21 Nov 2010 02:40:21 +0000 (02:40 +0000)]

Add comment.

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bangerth [Sun, 21 Nov 2010 02:37:25 +0000 (02:37 +0000)]

Announce VectorTools::interpolate_boundary_values for codim=1.

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bangerth [Sun, 21 Nov 2010 02:29:21 +0000 (02:29 +0000)]

Add missing function DoFAccessor<0,1,spacedim>::vertex_dof_index.

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bangerth [Sat, 20 Nov 2010 22:37:23 +0000 (22:37 +0000)]

Move test now that it works.

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bangerth [Sat, 20 Nov 2010 22:34:28 +0000 (22:34 +0000)]

Make VectorTools::interpolate_boundary_values work for codim=1, at least for 2d triangulations.

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bangerth [Sat, 20 Nov 2010 00:08:58 +0000 (00:08 +0000)]

Simplify code slightly.

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bangerth [Sat, 20 Nov 2010 00:06:45 +0000 (00:06 +0000)]

Simplify code slightly.

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kanschat [Sat, 20 Nov 2010 00:00:06 +0000 (00:00 +0000)]

add relaxation methods to preconditioner module

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bangerth [Fri, 19 Nov 2010 23:59:51 +0000 (23:59 +0000)]

Simplify code a bit.

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bangerth [Fri, 19 Nov 2010 20:21:29 +0000 (20:21 +0000)]

The data type of the unit_tangentials should be a Tensor<1,dim>, not Tensor<1,spacedim>. With this change, rewrite code in such a way that we can now build FEFaceValues also for the case <2,3>, though we still get missing symbols elsewhere.

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bangerth [Fri, 19 Nov 2010 16:36:35 +0000 (16:36 +0000)]

Minor re-indenting while reading through the class. Change the lovely
word "reduplicate" into "duplicate" ;-)

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kronbichler [Fri, 19 Nov 2010 16:15:56 +0000 (16:15 +0000)]

Compile the directories with files with long compile times first.

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kanschat [Fri, 19 Nov 2010 15:03:17 +0000 (15:03 +0000)]

add transformation of vector fields and rearrange documentation from basic to hybrid

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buerg [Fri, 19 Nov 2010 07:33:46 +0000 (07:33 +0000)]

Fixed a bug in the Nedelec elements

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bangerth [Fri, 19 Nov 2010 03:21:53 +0000 (03:21 +0000)]

Reindent a couple places.

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bangerth [Fri, 19 Nov 2010 02:14:17 +0000 (02:14 +0000)]

Remove unused argument.

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bangerth [Fri, 19 Nov 2010 01:53:58 +0000 (01:53 +0000)]

Upgrade to TBB 3.0. This fixes a bunch of testsuite failures on our new 48-core machine.

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