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https://gitweb.dealii.org/ - dealii-svn.git/log
bangerth [Mon, 30 Sep 2013 13:16:11 +0000 (13:16 +0000)]
Move comment into the right place.
git-svn-id: https://svn.dealii.org/trunk@31027
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bangerth [Mon, 30 Sep 2013 03:52:45 +0000 (03:52 +0000)]
Document geometry generation.
git-svn-id: https://svn.dealii.org/trunk@31025
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bangerth [Mon, 30 Sep 2013 03:39:53 +0000 (03:39 +0000)]
Some more updates.
git-svn-id: https://svn.dealii.org/trunk@31024
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heister [Mon, 30 Sep 2013 01:16:24 +0000 (01:16 +0000)]
change const bool& parameter to not be a reference in write_hdf5_parallel
git-svn-id: https://svn.dealii.org/trunk@31023
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heister [Mon, 30 Sep 2013 00:50:21 +0000 (00:50 +0000)]
remove hdf5 related compiler warning
git-svn-id: https://svn.dealii.org/trunk@31022
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scott.miller [Mon, 30 Sep 2013 00:13:51 +0000 (00:13 +0000)]
Fix typo in documentation.
git-svn-id: https://svn.dealii.org/trunk@31021
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bangerth [Sun, 29 Sep 2013 23:19:32 +0000 (23:19 +0000)]
Try to align instantiations to declarations, in hopes of fixing bug #122.
git-svn-id: https://svn.dealii.org/trunk@31020
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bangerth [Sun, 29 Sep 2013 23:18:26 +0000 (23:18 +0000)]
Provide copy constructors for iterators.
git-svn-id: https://svn.dealii.org/trunk@31019
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bangerth [Sun, 29 Sep 2013 22:55:32 +0000 (22:55 +0000)]
More small mods.
git-svn-id: https://svn.dealii.org/trunk@31018
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bangerth [Sun, 29 Sep 2013 22:44:59 +0000 (22:44 +0000)]
Further cleanups.
git-svn-id: https://svn.dealii.org/trunk@31017
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bangerth [Sun, 29 Sep 2013 18:48:12 +0000 (18:48 +0000)]
Clean up member variable list somewhat. As far as possible, initialize member variables in the initializer list and then mark them as const.
git-svn-id: https://svn.dealii.org/trunk@31013
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bangerth [Sun, 29 Sep 2013 14:58:31 +0000 (14:58 +0000)]
Add a few comments. Fix a couple of oversights where the same function is used for both cell integrals and boundary integrals (though the evaluated function values are, in fact, only used for the boundary integrals).
git-svn-id: https://svn.dealii.org/trunk@31011
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frohne [Sat, 28 Sep 2013 23:20:10 +0000 (23:20 +0000)]
fix sphere obstacle function
git-svn-id: https://svn.dealii.org/trunk@31009
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bangerth [Sat, 28 Sep 2013 21:55:29 +0000 (21:55 +0000)]
Add a newline to the end of the file, as mandated by the C++ standard.
git-svn-id: https://svn.dealii.org/trunk@31006
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bangerth [Sat, 28 Sep 2013 21:55:12 +0000 (21:55 +0000)]
Add a newline to the end of the file, as mandated by the C++ standard.
git-svn-id: https://svn.dealii.org/trunk@31005
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bangerth [Sat, 28 Sep 2013 21:42:33 +0000 (21:42 +0000)]
Make compile with 64-bit.
git-svn-id: https://svn.dealii.org/trunk@31003
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bangerth [Sat, 28 Sep 2013 11:59:19 +0000 (11:59 +0000)]
More minor changes.
git-svn-id: https://svn.dealii.org/trunk@30999
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bangerth [Sat, 28 Sep 2013 11:40:39 +0000 (11:40 +0000)]
Slightly more cleanup.
git-svn-id: https://svn.dealii.org/trunk@30998
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heien [Fri, 27 Sep 2013 23:48:07 +0000 (23:48 +0000)]
Added DataOutFilter class to remove duplicate vertices/values and serialization for XDMFEntry class
git-svn-id: https://svn.dealii.org/trunk@30991
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bangerth [Fri, 27 Sep 2013 20:57:56 +0000 (20:57 +0000)]
Reindent.
git-svn-id: https://svn.dealii.org/trunk@30990
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bangerth [Fri, 27 Sep 2013 20:56:43 +0000 (20:56 +0000)]
Rename a couple of things.
git-svn-id: https://svn.dealii.org/trunk@30989
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bangerth [Fri, 27 Sep 2013 20:54:58 +0000 (20:54 +0000)]
Update.
git-svn-id: https://svn.dealii.org/trunk@30988
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bangerth [Fri, 27 Sep 2013 20:49:39 +0000 (20:49 +0000)]
Move around a bit of stuff. More documentation.
git-svn-id: https://svn.dealii.org/trunk@30987
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bangerth [Fri, 27 Sep 2013 13:10:22 +0000 (13:10 +0000)]
Move initialization of obstacle into constructor of main class.
git-svn-id: https://svn.dealii.org/trunk@30984
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bangerth [Fri, 27 Sep 2013 13:04:43 +0000 (13:04 +0000)]
Let the main class only store a pointer to the obstacle, not the object that reads in the file.
git-svn-id: https://svn.dealii.org/trunk@30981
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bangerth [Fri, 27 Sep 2013 13:02:54 +0000 (13:02 +0000)]
add
git-svn-id: https://svn.dealii.org/trunk@30980
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maier [Fri, 27 Sep 2013 12:49:42 +0000 (12:49 +0000)]
CMake: Bugfix - nice try...
git-svn-id: https://svn.dealii.org/trunk@30978
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heister [Fri, 27 Sep 2013 12:48:12 +0000 (12:48 +0000)]
fix crash in ConstraintMatrix constructor taking IndexSet (release mode only)
git-svn-id: https://svn.dealii.org/trunk@30977
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maier [Fri, 27 Sep 2013 12:43:26 +0000 (12:43 +0000)]
CMake: Bugfix: Also include 3rd party include directories in FindPETSC.conf
It is really necessary to use all exported include directories from a PETSc
installation.
git-svn-id: https://svn.dealii.org/trunk@30975
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bangerth [Fri, 27 Sep 2013 12:34:23 +0000 (12:34 +0000)]
Avoid infinite loop.
git-svn-id: https://svn.dealii.org/trunk@30973
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bangerth [Fri, 27 Sep 2013 12:21:55 +0000 (12:21 +0000)]
Make compile again.
git-svn-id: https://svn.dealii.org/trunk@30972
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frohne [Thu, 26 Sep 2013 21:39:35 +0000 (21:39 +0000)]
small change in update_solution_and_constraints
git-svn-id: https://svn.dealii.org/trunk@30971
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turcksin [Thu, 26 Sep 2013 20:37:50 +0000 (20:37 +0000)]
Use std_cxx1x::function for graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30970
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kanschat [Thu, 26 Sep 2013 18:42:50 +0000 (18:42 +0000)]
fix elasticity test
git-svn-id: https://svn.dealii.org/trunk@30964
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kanschat [Thu, 26 Sep 2013 18:42:28 +0000 (18:42 +0000)]
new residual Divergence::u_times_n\
fixed elasticity residuals
git-svn-id: https://svn.dealii.org/trunk@30963
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kanschat [Thu, 26 Sep 2013 15:49:18 +0000 (15:49 +0000)]
fix typo
git-svn-id: https://svn.dealii.org/trunk@30961
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frohne [Thu, 26 Sep 2013 15:26:10 +0000 (15:26 +0000)]
splitting obstacle class into two classes
git-svn-id: https://svn.dealii.org/trunk@30959
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felix.gruber [Thu, 26 Sep 2013 12:24:50 +0000 (12:24 +0000)]
doc/users: fix some broken links
git-svn-id: https://svn.dealii.org/trunk@30950
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maier [Thu, 26 Sep 2013 09:28:52 +0000 (09:28 +0000)]
Fix a lot of links
git-svn-id: https://svn.dealii.org/trunk@30945
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maier [Thu, 26 Sep 2013 09:18:00 +0000 (09:18 +0000)]
Add a second link for the reports
git-svn-id: https://svn.dealii.org/trunk@30944
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maier [Thu, 26 Sep 2013 09:15:15 +0000 (09:15 +0000)]
Fix typos
git-svn-id: https://svn.dealii.org/trunk@30943
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kanschat [Thu, 26 Sep 2013 08:58:02 +0000 (08:58 +0000)]
advection residuals fixed
git-svn-id: https://svn.dealii.org/trunk@30942
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kanschat [Thu, 26 Sep 2013 08:19:33 +0000 (08:19 +0000)]
weak residuals
git-svn-id: https://svn.dealii.org/trunk@30941
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bangerth [Thu, 26 Sep 2013 01:22:38 +0000 (01:22 +0000)]
Fix name of type...
git-svn-id: https://svn.dealii.org/trunk@30939
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bangerth [Wed, 25 Sep 2013 22:49:59 +0000 (22:49 +0000)]
Use types::global_dof_indices.
git-svn-id: https://svn.dealii.org/trunk@30931
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bangerth [Wed, 25 Sep 2013 22:48:53 +0000 (22:48 +0000)]
Use types::global_dof_indices.
git-svn-id: https://svn.dealii.org/trunk@30930
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maier [Wed, 25 Sep 2013 22:33:26 +0000 (22:33 +0000)]
The big documentation overhaul
git-svn-id: https://svn.dealii.org/trunk@30929
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maier [Wed, 25 Sep 2013 20:30:34 +0000 (20:30 +0000)]
Finish documentation
git-svn-id: https://svn.dealii.org/trunk@30925
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turcksin [Wed, 25 Sep 2013 17:28:47 +0000 (17:28 +0000)]
Fix a bug in work_stream when using graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30922
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turcksin [Wed, 25 Sep 2013 16:12:27 +0000 (16:12 +0000)]
Use graph coloring whith work_stream.
git-svn-id: https://svn.dealii.org/trunk@30921
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bangerth [Wed, 25 Sep 2013 14:57:51 +0000 (14:57 +0000)]
Add note about yesterday's change to PETSc wrappers.
git-svn-id: https://svn.dealii.org/trunk@30920
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scott.miller [Wed, 25 Sep 2013 12:44:32 +0000 (12:44 +0000)]
Fix typo in documentation.
git-svn-id: https://svn.dealii.org/trunk@30919
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bangerth [Tue, 24 Sep 2013 18:25:07 +0000 (18:25 +0000)]
Avoid outputting 'number-number' since ./normalize might turn that into numbernumber if the second number just so happens to be zero -- and then consequently completely confuse numdiff.
git-svn-id: https://svn.dealii.org/trunk@30917
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bangerth [Tue, 24 Sep 2013 18:12:47 +0000 (18:12 +0000)]
Work around a change in PETSc 3.4.
git-svn-id: https://svn.dealii.org/trunk@30916
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kanschat [Tue, 24 Sep 2013 16:12:47 +0000 (16:12 +0000)]
instantiate selectors for const vectors
git-svn-id: https://svn.dealii.org/trunk@30915
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daniel.arndt [Tue, 24 Sep 2013 14:37:29 +0000 (14:37 +0000)]
Fixed bug in add_periodicity. There were errors when the mesh is not immediately refined.
git-svn-id: https://svn.dealii.org/trunk@30914
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kanschat [Tue, 24 Sep 2013 09:04:36 +0000 (09:04 +0000)]
add homogeneous boundary operator
git-svn-id: https://svn.dealii.org/trunk@30907
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bangerth [Tue, 24 Sep 2013 00:35:14 +0000 (00:35 +0000)]
More work.
git-svn-id: https://svn.dealii.org/trunk@30903
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bangerth [Mon, 23 Sep 2013 23:56:21 +0000 (23:56 +0000)]
Some more work.
git-svn-id: https://svn.dealii.org/trunk@30902
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bangerth [Mon, 23 Sep 2013 21:15:23 +0000 (21:15 +0000)]
More small rewrites.
git-svn-id: https://svn.dealii.org/trunk@30901
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bangerth [Mon, 23 Sep 2013 16:11:26 +0000 (16:11 +0000)]
Resize picture.
git-svn-id: https://svn.dealii.org/trunk@30900
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bangerth [Mon, 23 Sep 2013 15:58:51 +0000 (15:58 +0000)]
Use pictures from the central repository.
git-svn-id: https://svn.dealii.org/trunk@30898
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bangerth [Mon, 23 Sep 2013 15:58:27 +0000 (15:58 +0000)]
More editing. Return some values rather than having functions have several output arguments.
git-svn-id: https://svn.dealii.org/trunk@30897
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bangerth [Mon, 23 Sep 2013 15:48:30 +0000 (15:48 +0000)]
Remove the original tex version of the introduction.
git-svn-id: https://svn.dealii.org/trunk@30896
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maier [Mon, 23 Sep 2013 15:23:24 +0000 (15:23 +0000)]
Remove the out-of-source check from DEAL_II_INVOKE_AUTOPILOT
git-svn-id: https://svn.dealii.org/trunk@30895
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scott.miller [Mon, 23 Sep 2013 14:02:09 +0000 (14:02 +0000)]
Fix typos and set diffusion in step-51.
git-svn-id: https://svn.dealii.org/trunk@30894
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bangerth [Mon, 23 Sep 2013 13:41:10 +0000 (13:41 +0000)]
Use standard indentation scheme.
git-svn-id: https://svn.dealii.org/trunk@30893
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bangerth [Mon, 23 Sep 2013 13:39:34 +0000 (13:39 +0000)]
Minor edits.
git-svn-id: https://svn.dealii.org/trunk@30892
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bangerth [Mon, 23 Sep 2013 13:39:18 +0000 (13:39 +0000)]
Rename images to standard naming scheme. Add the image that describes the obstacle.
git-svn-id: https://svn.dealii.org/trunk@30891
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bangerth [Mon, 23 Sep 2013 03:18:31 +0000 (03:18 +0000)]
Work on the introduction.
git-svn-id: https://svn.dealii.org/trunk@30890
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fahad.alrashed [Sat, 21 Sep 2013 16:23:32 +0000 (16:23 +0000)]
modified dealii/data_out.cc to test both write_visit_record functions
git-svn-id: https://svn.dealii.org/trunk@30888
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fahad.alrashed [Sat, 21 Sep 2013 16:05:02 +0000 (16:05 +0000)]
forgot to add a new entry in changes.h
git-svn-id: https://svn.dealii.org/trunk@30887
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fahad.alrashed [Sat, 21 Sep 2013 15:52:05 +0000 (15:52 +0000)]
added write_visit_record that allows for multiple blocks and more than one time step
git-svn-id: https://svn.dealii.org/trunk@30886
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bangerth [Sat, 21 Sep 2013 12:29:40 +0000 (12:29 +0000)]
Fix grammar of message.
git-svn-id: https://svn.dealii.org/trunk@30885
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bangerth [Sat, 21 Sep 2013 12:03:54 +0000 (12:03 +0000)]
Minor markup improvements.
git-svn-id: https://svn.dealii.org/trunk@30884
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bangerth [Sat, 21 Sep 2013 12:03:40 +0000 (12:03 +0000)]
Fix leftover note.
git-svn-id: https://svn.dealii.org/trunk@30883
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bangerth [Fri, 20 Sep 2013 23:12:29 +0000 (23:12 +0000)]
Fix two tests.
git-svn-id: https://svn.dealii.org/trunk@30878
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bangerth [Fri, 20 Sep 2013 23:00:53 +0000 (23:00 +0000)]
Add an instantiation that was previous missing in optimized mode.
git-svn-id: https://svn.dealii.org/trunk@30877
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bangerth [Fri, 20 Sep 2013 22:21:54 +0000 (22:21 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@30876
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bangerth [Fri, 20 Sep 2013 13:06:08 +0000 (13:06 +0000)]
Add two.
git-svn-id: https://svn.dealii.org/trunk@30872
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turcksin [Thu, 19 Sep 2013 20:39:37 +0000 (20:39 +0000)]
Change graph_coloring to accept an user-defined function to get the conflict_indices.
git-svn-id: https://svn.dealii.org/trunk@30846
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heister [Thu, 19 Sep 2013 18:30:26 +0000 (18:30 +0000)]
fix test
git-svn-id: https://svn.dealii.org/trunk@30839
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daniel.arndt [Thu, 19 Sep 2013 16:45:08 +0000 (16:45 +0000)]
Added new tests for collect_periodic_face_pairs
git-svn-id: https://svn.dealii.org/trunk@30835
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daniel.arndt [Thu, 19 Sep 2013 16:33:50 +0000 (16:33 +0000)]
Added tests for collect_periodic_face_pairs and unified code in make_periodicity_constraints
git-svn-id: https://svn.dealii.org/trunk@30832
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heister [Thu, 19 Sep 2013 14:58:19 +0000 (14:58 +0000)]
add hdf5 test
git-svn-id: https://svn.dealii.org/trunk@30828
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heister [Thu, 19 Sep 2013 14:54:21 +0000 (14:54 +0000)]
tests: move cat_file to other header
git-svn-id: https://svn.dealii.org/trunk@30827
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bangerth [Thu, 19 Sep 2013 14:32:13 +0000 (14:32 +0000)]
Document the exception that is being thrown.
git-svn-id: https://svn.dealii.org/trunk@30826
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scott.miller [Thu, 19 Sep 2013 02:00:54 +0000 (02:00 +0000)]
Step-51 documentation fixes.
git-svn-id: https://svn.dealii.org/trunk@30818
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heien [Wed, 18 Sep 2013 21:31:52 +0000 (21:31 +0000)]
Fixed HDF5 multiprocessor bug
git-svn-id: https://svn.dealii.org/trunk@30812
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turcksin [Wed, 18 Sep 2013 21:09:09 +0000 (21:09 +0000)]
Add test for graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30809
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heister [Wed, 18 Sep 2013 16:36:56 +0000 (16:36 +0000)]
add test
git-svn-id: https://svn.dealii.org/trunk@30803
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heister [Wed, 18 Sep 2013 16:36:32 +0000 (16:36 +0000)]
find_active_cell_around_point now throws the exception ExcPointNotFound
git-svn-id: https://svn.dealii.org/trunk@30802
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heister [Wed, 18 Sep 2013 15:39:17 +0000 (15:39 +0000)]
disable checking MPI_init_thread return value because some implementations always return _SINGLE.
git-svn-id: https://svn.dealii.org/trunk@30799
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daniel.arndt [Wed, 18 Sep 2013 15:24:34 +0000 (15:24 +0000)]
Fixed add_periodity
git-svn-id: https://svn.dealii.org/trunk@30798
0785d39b -7218-0410-832d-
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turcksin [Wed, 18 Sep 2013 15:22:33 +0000 (15:22 +0000)]
Add a test for graph_coloring.
git-svn-id: https://svn.dealii.org/trunk@30797
0785d39b -7218-0410-832d-
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kronbichler [Wed, 18 Sep 2013 14:48:18 +0000 (14:48 +0000)]
Explain integrals
git-svn-id: https://svn.dealii.org/trunk@30795
0785d39b -7218-0410-832d-
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scott.miller [Wed, 18 Sep 2013 14:28:19 +0000 (14:28 +0000)]
Step-51 documentation updates.
git-svn-id: https://svn.dealii.org/trunk@30792
0785d39b -7218-0410-832d-
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heister [Wed, 18 Sep 2013 14:00:08 +0000 (14:00 +0000)]
update ignores
git-svn-id: https://svn.dealii.org/trunk@30788
0785d39b -7218-0410-832d-
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heister [Wed, 18 Sep 2013 13:31:23 +0000 (13:31 +0000)]
fix asserttion in test
git-svn-id: https://svn.dealii.org/trunk@30787
0785d39b -7218-0410-832d-
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heister [Wed, 18 Sep 2013 13:16:32 +0000 (13:16 +0000)]
fix r30770
git-svn-id: https://svn.dealii.org/trunk@30786
0785d39b -7218-0410-832d-
ea1e28bc413d
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