]>
https://gitweb.dealii.org/ - dealii.git/log
Peter Munch [Fri, 16 Aug 2019 04:14:20 +0000 (06:14 +0200)]
Enable internal::DoFHandlerImplementation::Policy::ParallelDistributed for 1D
Daniel Arndt [Tue, 20 Aug 2019 03:34:22 +0000 (23:34 -0400)]
Merge pull request #8586 from peterrum/cellid-getcoarsecellid
Return coarse-cell id by CellId
Daniel Arndt [Tue, 20 Aug 2019 03:05:27 +0000 (23:05 -0400)]
Merge pull request #8600 from peterrum/parallel_triangulationbase
Rename parallel::Triangulation to parallel::TriangulationBase
Daniel Arndt [Tue, 20 Aug 2019 02:33:35 +0000 (22:33 -0400)]
Merge pull request #8574 from bangerth/contract
Avoid a couple FP subtractions.
Peter Munch [Fri, 16 Aug 2019 03:11:27 +0000 (05:11 +0200)]
Add get_coarse_cell_id to CellID
Conflicts:
include/deal.II/grid/tria.h
Wolfgang Bangerth [Mon, 19 Aug 2019 19:56:46 +0000 (13:56 -0600)]
Merge pull request #8470 from omosebi1/saturationfix
Fix for Saturation Equation
Omotayo Omosebi [Mon, 19 Aug 2019 18:06:10 +0000 (14:06 -0400)]
Explains formulation of the saturation equation
Wolfgang Bangerth [Wed, 14 Aug 2019 23:26:10 +0000 (17:26 -0600)]
Avoid a couple FP subtractions.
By noting that the existing code performs dim subtractions of
terms that are each a product of two values, we can reorder
things in such a way that we first accumulate the products
(which is a dot product) and then subtract the result. This
should allow for some vectorization.
The performance gain is almost certainly completely negligible,
but it makes the code marginally easier to read. The reason
why the indices involved here allow for this is because
'jacobian_pushed_forward_grads[i]' happens to be a
Tensor<3,dim> and 'shape_gradients[k][i]' is a
Tensor<1,dim>. So the types are so that their product
is in fact equivalent to the summation of the last index
as was written before.
Peter Munch [Mon, 19 Aug 2019 06:33:59 +0000 (08:33 +0200)]
Rename parallel::Triangulation to parallel::TriangulationBase
Wolfgang Bangerth [Mon, 19 Aug 2019 16:49:15 +0000 (10:49 -0600)]
Merge pull request #8542 from maemar/generalized-subdivided-hyperL
Added the function GridGenerator::subdivided_hyper_L().
Wolfgang Bangerth [Mon, 19 Aug 2019 03:04:56 +0000 (21:04 -0600)]
Merge pull request #8594 from masterleinad/cxx17optional
Replace boost::optional by std_cxx17::optional.
Wolfgang Bangerth [Sun, 18 Aug 2019 22:03:09 +0000 (16:03 -0600)]
Merge pull request #8595 from rezarastak/add_inline
added inlined keyword to function definitions in quadrature_point_data.h
Daniel Arndt [Sun, 18 Aug 2019 13:09:48 +0000 (09:09 -0400)]
Merge pull request #8596 from bangerth/exscan
Use MPI_Exscan instead of MPI_Scan.
Daniel Arndt [Sun, 18 Aug 2019 13:08:27 +0000 (09:08 -0400)]
Merge pull request #8593 from peterrum/dofaccessor_mgdofindices_1D
Implement DoFAccessor::set/get_mg_dof_indices for 1D
Daniel Arndt [Sun, 18 Aug 2019 13:08:01 +0000 (09:08 -0400)]
Merge pull request #8585 from rezarastak/doxygen_forward_declarations
added #ifndef DOXYGEN to forward declarations
Daniel Arndt [Sun, 18 Aug 2019 04:20:49 +0000 (00:20 -0400)]
Merge pull request #8588 from GrahamBenHarper/graham_dev_polynomials_derived
Change Polynomial Classes to Derive from TensorPolynomialsBase
Wolfgang Bangerth [Sun, 18 Aug 2019 03:10:20 +0000 (21:10 -0600)]
Use MPI_Exscan instead of MPI_Scan.
Daniel Arndt [Sun, 18 Aug 2019 02:24:00 +0000 (22:24 -0400)]
Merge pull request #8555 from marcfehling/hp-chainsofconstraints
New test: Chains of constraints on parallel hp-adaptive applications.
Daniel Arndt [Sat, 17 Aug 2019 16:31:54 +0000 (12:31 -0400)]
Replace boost::optional by std_cxx17::optional
Peter Munch [Sat, 17 Aug 2019 04:22:18 +0000 (06:22 +0200)]
Implement DoFAccessor::set_mg_dof_indices and get_mg_dof_indices for 1D
grahambenharper [Fri, 16 Aug 2019 07:37:23 +0000 (01:37 -0600)]
Change Polynomials classes to derive from TensorPolynomialsBase
Reza Rastak [Sat, 17 Aug 2019 19:03:43 +0000 (12:03 -0700)]
added inlined keyword to function definitions in quadrature_point_data.h
Daniel Arndt [Sat, 17 Aug 2019 05:08:38 +0000 (01:08 -0400)]
Merge pull request #8572 from bangerth/cleanups
Make a few variables 'const'.
Reza Rastak [Sat, 17 Aug 2019 00:56:07 +0000 (17:56 -0700)]
forward declatations removed from doxygen in all header files
Wolfgang Bangerth [Wed, 14 Aug 2019 23:22:04 +0000 (17:22 -0600)]
Make a few variables 'const'.
Wolfgang Bangerth [Fri, 16 Aug 2019 20:40:10 +0000 (14:40 -0600)]
Merge pull request #8569 from peterrum/cellaccessor_faceiterators
Add cell->face_iterators()
David Wells [Fri, 16 Aug 2019 15:37:29 +0000 (09:37 -0600)]
Merge pull request #8570 from melaniegerault/eccentric_hyper_shell
Add the links to the figures in the documentation of GridGenerator::eccentric_hyper_shell()
David Wells [Fri, 16 Aug 2019 15:30:47 +0000 (09:30 -0600)]
Merge pull request #8573 from melaniegerault/master
Exclude MacOS self-generated files from untracked files
Reza Rastak [Fri, 16 Aug 2019 03:01:38 +0000 (20:01 -0700)]
added #ifndef DOXYGEN to some forward declarations
Timo Heister [Fri, 16 Aug 2019 02:28:36 +0000 (20:28 -0600)]
Merge pull request #8584 from masterleinad/fix_clang_tidy_symengine
Fix clang-tidy complaints for Symengine
Daniel Arndt [Thu, 15 Aug 2019 18:07:29 +0000 (14:07 -0400)]
Merge pull request #8580 from masterleinad/mf_additional_ref
Pass MatrixFree::AdditionalData by reference
Daniel Arndt [Thu, 15 Aug 2019 17:49:59 +0000 (13:49 -0400)]
Fix clang-tidy complaints for Symengine
Melanie Gerault [Wed, 14 Aug 2019 22:54:15 +0000 (18:54 -0400)]
.DS_Store etc. and .swp removed from untracked files
Daniel Arndt [Thu, 15 Aug 2019 15:21:16 +0000 (11:21 -0400)]
Merge pull request #8576 from peterrum/test_grid_accessor_01
Correct variable type in test grid/accessor_01
Daniel Arndt [Thu, 15 Aug 2019 12:46:53 +0000 (08:46 -0400)]
Merge pull request #8582 from simonsticko/fix_parallel_block_vector_warning
Update deprecated warning message in parallel_block_vector.h.
Simon Sticko [Thu, 15 Aug 2019 07:14:30 +0000 (09:14 +0200)]
Update deprecated warning message in parallel_block_vector.h.
The warning suggests including a file which doesn't exist. Change the
message to the intended file.
Daniel Arndt [Thu, 15 Aug 2019 04:56:10 +0000 (00:56 -0400)]
Pass MatrixFree::AdditionalData by reference
Daniel Arndt [Thu, 15 Aug 2019 03:22:00 +0000 (23:22 -0400)]
Merge pull request #8513 from gassmoeller/change_pack_compression_to_default
Add compression options to pack and use default parameters
Daniel Arndt [Thu, 15 Aug 2019 03:21:30 +0000 (23:21 -0400)]
Merge pull request #8522 from gassmoeller/optimize_particle_packing
Implement pack_particles functions
Peter Munch [Thu, 15 Aug 2019 02:02:40 +0000 (04:02 +0200)]
Correct variable type in test grid/accessor_01
Peter Munch [Wed, 14 Aug 2019 13:43:31 +0000 (15:43 +0200)]
Add cell->face_iterators()
Melanie Gerault [Wed, 14 Aug 2019 21:56:15 +0000 (17:56 -0400)]
Update to documentation and downsized figures
Wolfgang Bangerth [Wed, 14 Aug 2019 21:36:25 +0000 (15:36 -0600)]
Merge pull request #8528 from GrahamBenHarper/graham_dev_polynomials_base
Implement the PolynomialsBase classes
Rene Gassmoeller [Wed, 14 Aug 2019 21:12:53 +0000 (14:12 -0700)]
Move functions in anonymous namespace
Marc Fehling [Wed, 14 Aug 2019 19:41:56 +0000 (13:41 -0600)]
Divided scenario into three separate ones.
Wolfgang Bangerth [Wed, 14 Aug 2019 20:03:13 +0000 (14:03 -0600)]
Merge pull request #8430 from masterleinad/reduce_floating_point_division
Reduce floating-point division in operator/
Marc Fehling [Mon, 12 Aug 2019 22:32:03 +0000 (16:32 -0600)]
New test: Chains of constraints on parallel hp-adaptive applications.
Melanie Gerault [Wed, 14 Aug 2019 19:00:40 +0000 (15:00 -0400)]
Added the links to the pictures in the documentation of GridGenerator::eccentric_hyper_shell()
Matthias Maier [Wed, 14 Aug 2019 18:32:00 +0000 (13:32 -0500)]
Merge pull request #8526 from melaniegerault/eccentric_hyper_shell
Eccentric hyper shell
grahambenharper [Fri, 9 Aug 2019 00:27:26 +0000 (18:27 -0600)]
Implement the PolynomialsBase class
Melanie Gerault [Fri, 9 Aug 2019 05:34:05 +0000 (23:34 -0600)]
Figures for 2D and 3D grids plus edits on grid_generator.cc
Melanie Gerault [Thu, 8 Aug 2019 23:43:29 +0000 (17:43 -0600)]
Update source/grid/grid_generator.cc
Co-Authored-By: David Wells <drwells@email.unc.edu>
Melanie Gerault [Thu, 8 Aug 2019 21:48:19 +0000 (15:48 -0600)]
Add GridGenerator::eccentric_hyper_shell
Add an eccentric hyper shell geometry that is formed by two spheres
with different center points.
Melanie Gerault [Thu, 8 Aug 2019 21:48:19 +0000 (15:48 -0600)]
Add GridGenerator::eccentric_hyper_shell
Add an eccentric hyper shell geometry that is formed by two spheres
with different center points.
David Wells [Wed, 14 Aug 2019 14:25:37 +0000 (08:25 -0600)]
Merge pull request #8566 from dangars/full_matrix_doxygen
Fix doxygen documentation
Wolfgang Bangerth [Wed, 14 Aug 2019 12:44:34 +0000 (06:44 -0600)]
Merge pull request #8568 from simonsticko/fix_git-hook_instructions
Update instructions on where to find the pre-commit git-hook.
Simon Sticko [Wed, 14 Aug 2019 12:28:56 +0000 (14:28 +0200)]
Update instructions on where to find the pre-commit git-hook.
Matthias Maier [Wed, 14 Aug 2019 03:53:39 +0000 (22:53 -0500)]
Merge pull request #8382 from fmilicchio/master
Checking if MPI is enabled to allow both Trilinos and PETSc.
Daniel Garcia-Sanchez [Wed, 14 Aug 2019 01:00:48 +0000 (03:00 +0200)]
Fix doxygen documentation
Rene Gassmoeller [Thu, 8 Aug 2019 16:42:17 +0000 (10:42 -0600)]
Use default compression for Utilities::pack
Martin Kronbichler [Tue, 13 Aug 2019 16:58:57 +0000 (18:58 +0200)]
Merge pull request #8560 from bangerth/assert
Fix an assertion that was missing a semicolon.
Mae Markowski [Tue, 13 Aug 2019 16:27:12 +0000 (11:27 -0500)]
forgot to indent
Mae Markowski [Tue, 13 Aug 2019 16:18:09 +0000 (11:18 -0500)]
fixed typo, made h array, renamed variable
Daniel Arndt [Tue, 13 Aug 2019 15:24:20 +0000 (11:24 -0400)]
Merge pull request #8557 from bangerth/22
Update the description in step-8 that uses the new pictures.
Wolfgang Bangerth [Tue, 13 Aug 2019 14:19:50 +0000 (08:19 -0600)]
Merge pull request #8539 from chronictectonic/step-8_figures
Improve resolution in step 8.
Wolfgang Bangerth [Mon, 12 Aug 2019 23:54:09 +0000 (17:54 -0600)]
Update the description in step-8 that uses the new pictures.
Wolfgang Bangerth [Tue, 13 Aug 2019 03:37:59 +0000 (21:37 -0600)]
Fix an assertion that was missing a semicolon.
David Wells [Tue, 13 Aug 2019 13:26:23 +0000 (07:26 -0600)]
Merge pull request #8561 from masterleinad/another_mailmap
Add another .mailmap entry
Daniel Arndt [Tue, 13 Aug 2019 13:10:21 +0000 (09:10 -0400)]
Add another .mailmap entry
Daniel Arndt [Tue, 13 Aug 2019 13:02:21 +0000 (09:02 -0400)]
Merge pull request #8519 from mjayadharan/grid_tools_debug
Grid tools debug
Daniel Arndt [Tue, 13 Aug 2019 13:01:40 +0000 (09:01 -0400)]
Merge pull request #8429 from marcfehling/pd-fetransfer
Parallel distributed: Communicate active_fe_indices after deserializa…
Daniel Arndt [Tue, 13 Aug 2019 03:13:42 +0000 (23:13 -0400)]
Merge pull request #8559 from bangerth/3
Minor update to step-3.
Daniel Arndt [Tue, 13 Aug 2019 03:01:22 +0000 (23:01 -0400)]
Merge pull request #8556 from bangerth/sticked
Fix a funny comment.
Wolfgang Bangerth [Tue, 13 Aug 2019 02:56:08 +0000 (20:56 -0600)]
Correct indentation.
Daniel Arndt [Tue, 13 Aug 2019 02:54:08 +0000 (22:54 -0400)]
Merge pull request #8554 from bangerth/doc
Update a piece of documentation to use less jargon.
Wolfgang Bangerth [Tue, 13 Aug 2019 00:20:14 +0000 (18:20 -0600)]
Merge pull request #8514 from User-zwj/step-2-dof-extension
Add extension to step2
Wolfgang Bangerth [Tue, 13 Aug 2019 00:17:22 +0000 (18:17 -0600)]
Minor update to step-3.
Wolfgang Bangerth [Mon, 12 Aug 2019 23:43:37 +0000 (17:43 -0600)]
Fix a funny comment.
Wolfgang Bangerth [Mon, 12 Aug 2019 23:05:51 +0000 (17:05 -0600)]
Update a piece of documentation to use less jargon.
Daniel Arndt [Mon, 12 Aug 2019 21:54:08 +0000 (17:54 -0400)]
Merge pull request #8547 from kronbichler/fix_mf_ghosting
Fix bug in MatrixFree ghost exchange with faces and FE_Q
Mae Markowski [Fri, 9 Aug 2019 22:40:44 +0000 (16:40 -0600)]
Adding function subdivided_hyper_L to GridGenerator.
Added changelog entry, replaced call to .at() with [] operator,
fixed lines breaks in documentation.
forgot to fix indentation
changed parameter order
updated log file and error message
David Wells [Mon, 12 Aug 2019 14:37:20 +0000 (08:37 -0600)]
Merge pull request #8551 from bangerth/doc
Update some documentation pieces.
Wolfgang Bangerth [Mon, 12 Aug 2019 14:05:35 +0000 (08:05 -0600)]
Merge pull request #8479 from aggarwal-ashna/step4comments
step 4: minor documentation edits
Wolfgang Bangerth [Mon, 12 Aug 2019 13:20:13 +0000 (07:20 -0600)]
Update some documentation pieces.
David Wells [Mon, 12 Aug 2019 13:04:46 +0000 (07:04 -0600)]
Merge pull request #8531 from masterleinad/cuda_warnings_always_inline
Avoid CUDA warnings related to DEAL_II_ALWAYS_INLINE
Martin Kronbichler [Mon, 12 Aug 2019 10:01:49 +0000 (12:01 +0200)]
Merge pull request #8549 from drwells/local_branch
Add more citations to step-51.
Martin Kronbichler [Mon, 12 Aug 2019 07:17:51 +0000 (09:17 +0200)]
Merge pull request #8521 from Rombur/matrix_free_atomic
Matrix free atomic
Martin Kronbichler [Sun, 11 Aug 2019 19:09:21 +0000 (21:09 +0200)]
Changelog
Martin Kronbichler [Sun, 11 Aug 2019 19:08:43 +0000 (21:08 +0200)]
Add test
Martin Kronbichler [Sun, 11 Aug 2019 19:06:05 +0000 (21:06 +0200)]
Fix two bugs in MF ghost exchange with FE_Q and faces
Martin Kronbichler [Mon, 12 Aug 2019 05:35:40 +0000 (07:35 +0200)]
Merge pull request #8550 from masterleinad/add_mailmap
Add mailmap entry
Daniel Arndt [Mon, 12 Aug 2019 02:20:57 +0000 (22:20 -0400)]
Add mailmap entry
David Wells [Mon, 12 Aug 2019 00:38:55 +0000 (20:38 -0400)]
Fix some little typos.
Tonatiuh Sanchez-Vizuet [Thu, 8 Aug 2019 17:35:09 +0000 (11:35 -0600)]
Added some references to the intro of step 51
Bruno Turcksin [Thu, 8 Aug 2019 21:53:35 +0000 (21:53 +0000)]
Add entry log
Bruno Turcksin [Thu, 8 Aug 2019 21:28:22 +0000 (21:28 +0000)]
Switch the tests to atomic operations and add a test for graph coloring
Bruno Turcksin [Thu, 8 Aug 2019 21:25:52 +0000 (21:25 +0000)]
Allow to use atomic operations instead of graph coloring in
CUDAWrappers::MatrixFree
Daniel Arndt [Sat, 10 Aug 2019 23:00:59 +0000 (17:00 -0600)]
Merge pull request #8538 from mjayadharan/grid-tools-documentation
improved documentation for grid generator
mjayadharan [Sat, 10 Aug 2019 22:50:21 +0000 (18:50 -0400)]
Address comments
Wolfgang Bangerth [Sat, 10 Aug 2019 21:42:12 +0000 (15:42 -0600)]
Merge pull request #8532 from tjhei/step-12-deallog
step-12: increase depth_console
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