]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoaddress review comments
Matthias Maier [Fri, 22 May 2020 14:24:23 +0000 (09:24 -0500)]
address review comments

4 years agoCMake: Put [[deprecated]] checks back in place
Matthias Maier [Fri, 22 May 2020 05:01:08 +0000 (00:01 -0500)]
CMake: Put [[deprecated]] checks back in place

4 years agoCMake: help some old compilers with C++14 support
Matthias Maier [Fri, 22 May 2020 04:39:05 +0000 (23:39 -0500)]
CMake: help some old compilers with C++14 support

4 years agoadd a changelog entry
Matthias Maier [Fri, 22 May 2020 04:00:57 +0000 (23:00 -0500)]
add a changelog entry

4 years agoupdate documentation
Matthias Maier [Fri, 22 May 2020 03:51:56 +0000 (22:51 -0500)]
update documentation

4 years agoremove DEAL_II_WITH_CXX* from the source code
Matthias Maier [Fri, 22 May 2020 03:48:08 +0000 (22:48 -0500)]
remove DEAL_II_WITH_CXX* from the source code

4 years agoremove DEAL_II_WITH_CXX* from ./source/**
Matthias Maier [Fri, 22 May 2020 03:34:55 +0000 (22:34 -0500)]
remove DEAL_II_WITH_CXX* from ./source/**

4 years agoCMake: restructure more stuff
Matthias Maier [Fri, 22 May 2020 03:24:50 +0000 (22:24 -0500)]
CMake: restructure more stuff

4 years agoremove DEAL_II_IS_TRIVIALLY_COPYABLE
Matthias Maier [Fri, 22 May 2020 03:09:27 +0000 (22:09 -0500)]
remove DEAL_II_IS_TRIVIALLY_COPYABLE

4 years agoupdate configuration
Matthias Maier [Fri, 22 May 2020 02:34:35 +0000 (21:34 -0500)]
update configuration

4 years agoCMake: radically simplify checks/check_01_cxx_features.cmake
Matthias Maier [Thu, 21 May 2020 23:03:21 +0000 (18:03 -0500)]
CMake: radically simplify checks/check_01_cxx_features.cmake

 - remove DEAL_II_WITH_CXX* flags
 - require CXX14
 - remove all special C++ version flag handling

4 years agoMerge pull request #10274 from luca-heltai/fix-parameters-step-70
Martin Kronbichler [Sat, 23 May 2020 14:06:53 +0000 (16:06 +0200)]
Merge pull request #10274 from luca-heltai/fix-parameters-step-70

Fixed parameters for step-70.

4 years agoMerge pull request #10324 from tamiko/cmake_cleanup
David Wells [Sat, 23 May 2020 12:15:02 +0000 (08:15 -0400)]
Merge pull request #10324 from tamiko/cmake_cleanup

CMake cleanup

4 years agoCMake: Remove obsolete posix thread barrier detection 10324/head
Matthias Maier [Sat, 23 May 2020 05:04:58 +0000 (00:04 -0500)]
CMake: Remove obsolete posix thread barrier detection

4 years agoremove dead code
Matthias Maier [Sat, 23 May 2020 05:02:44 +0000 (00:02 -0500)]
remove dead code

4 years agoCMake: remove obsolete compiler bug tests
Matthias Maier [Sat, 23 May 2020 04:54:30 +0000 (23:54 -0500)]
CMake: remove obsolete compiler bug tests

The bugs

  DEAL_II_TEMPL_SPEC_FRIEND_BUG
  DEAL_II_CONST_MEMBER_DEDUCTION_BUG
  DEAL_II_BIND_NO_CONST_OP_PARENTHESES

do not trigger for any compiler we currently use (including gcc-4.9 up
to gcc-10, clang-4 up to clang-10 and corresponding apple clang, MSVC
2017 and 2019, icc 19*)

The bug

  DEAL_II_MEMBER_ARRAY_SPECIALIZATION_BUG

triggers only on MSVC 2017 and 2019 but the preprocessor macro is not
used in the library any more

4 years agoadd a changes entry
Matthias Maier [Sat, 23 May 2020 04:51:00 +0000 (23:51 -0500)]
add a changes entry

4 years agoCMake: remove obsolete configuration from config.h.in
Matthias Maier [Sat, 23 May 2020 04:48:51 +0000 (23:48 -0500)]
CMake: remove obsolete configuration from config.h.in

4 years agoMerge pull request #10315 from tamiko/thread_cleanup
Matthias Maier [Sat, 23 May 2020 04:32:27 +0000 (23:32 -0500)]
Merge pull request #10315 from tamiko/thread_cleanup

remove deprecated dealii::Thread classes and functions

4 years agoMerge pull request #10322 from tjhei/cuda8-deprecate-atomicadd
Matthias Maier [Sat, 23 May 2020 04:25:37 +0000 (23:25 -0500)]
Merge pull request #10322 from tjhei/cuda8-deprecate-atomicadd

cuda: deprecate atomicAdd_wrapper

4 years agoMerge pull request #10313 from bangerth/affine
Matthias Maier [Sat, 23 May 2020 04:24:39 +0000 (23:24 -0500)]
Merge pull request #10313 from bangerth/affine

Move a class out of a surrounding class.

4 years agoMerge pull request #10323 from tjhei/remove-gcc47-workaround
Matthias Maier [Sat, 23 May 2020 04:24:19 +0000 (23:24 -0500)]
Merge pull request #10323 from tjhei/remove-gcc47-workaround

Remove gcc 4.7 workaround

4 years agoMerge pull request #10312 from tjhei/github-actions-windows-errorlog
Matthias Maier [Sat, 23 May 2020 04:23:15 +0000 (23:23 -0500)]
Merge pull request #10312 from tjhei/github-actions-windows-errorlog

CI: github actions windows: CMakeError.log

4 years agoMerge pull request #10319 from bangerth/setprops
Matthias Maier [Sat, 23 May 2020 04:21:32 +0000 (23:21 -0500)]
Merge pull request #10319 from bangerth/setprops

Add a version of ParticleAccessor::set_properties().

4 years agoMerge pull request #10317 from tjhei/table_indices_cast
Matthias Maier [Sat, 23 May 2020 04:19:51 +0000 (23:19 -0500)]
Merge pull request #10317 from tjhei/table_indices_cast

remove const from static_cast

4 years agoadd defaults 10323/head
Timo Heister [Sat, 23 May 2020 01:21:42 +0000 (21:21 -0400)]
add defaults

4 years agocuda: deprecate atomicAdd_wrapper 10322/head
Timo Heister [Sat, 23 May 2020 00:44:33 +0000 (20:44 -0400)]
cuda: deprecate atomicAdd_wrapper

4 years agoMerge pull request #10318 from bangerth/override
David Wells [Sat, 23 May 2020 00:15:23 +0000 (20:15 -0400)]
Merge pull request #10318 from bangerth/override

Use 'override' on overridden member functions in the documentation.

4 years agoport remaining tests to std::mutex 10315/head
Matthias Maier [Fri, 22 May 2020 20:55:08 +0000 (15:55 -0500)]
port remaining tests to std::mutex

4 years agoremove obsolete test
Matthias Maier [Fri, 22 May 2020 20:51:10 +0000 (15:51 -0500)]
remove obsolete test

4 years agoremove obsolete test
Matthias Maier [Fri, 22 May 2020 20:48:42 +0000 (15:48 -0500)]
remove obsolete test

4 years agoadd a changes entry
Matthias Maier [Fri, 22 May 2020 17:50:52 +0000 (12:50 -0500)]
add a changes entry

4 years agoremove deprecated dealii::Thread classes and functions
Matthias Maier [Fri, 22 May 2020 17:48:52 +0000 (12:48 -0500)]
remove deprecated dealii::Thread classes and functions

4 years agoMerge pull request #9935 from bangerth/pthread
Matthias Maier [Fri, 22 May 2020 21:42:03 +0000 (16:42 -0500)]
Merge pull request #9935 from bangerth/pthread

Remove some pthread vestiges that were deprecated a while ago already

4 years agoAdd a changelog entry. 10319/head
Wolfgang Bangerth [Fri, 22 May 2020 21:27:30 +0000 (15:27 -0600)]
Add a changelog entry.

4 years agoAdd a version of ParticleAccessor::set_properties().
Wolfgang Bangerth [Fri, 22 May 2020 21:20:22 +0000 (15:20 -0600)]
Add a version of ParticleAccessor::set_properties().

4 years agoUse 'override' on overridden member functions in the documentation. 10318/head
Wolfgang Bangerth [Fri, 22 May 2020 21:20:40 +0000 (15:20 -0600)]
Use 'override' on overridden member functions in the documentation.

4 years agoAdd a changelog entry. 9935/head
Wolfgang Bangerth [Tue, 21 Apr 2020 19:57:57 +0000 (13:57 -0600)]
Add a changelog entry.

4 years agoRemove some pthread vestiges.
Wolfgang Bangerth [Tue, 21 Apr 2020 19:43:23 +0000 (13:43 -0600)]
Remove some pthread vestiges.

4 years agoremove gcc-4.7 workaround
Timo Heister [Fri, 22 May 2020 20:28:37 +0000 (16:28 -0400)]
remove gcc-4.7 workaround

4 years agoMerge pull request #10298 from tjhei/remove-cuda8
Daniel Arndt [Fri, 22 May 2020 20:14:28 +0000 (16:14 -0400)]
Merge pull request #10298 from tjhei/remove-cuda8

4 years agoMerge pull request #10316 from marcfehling/fix-vtu-parallel
David Wells [Fri, 22 May 2020 19:48:22 +0000 (15:48 -0400)]
Merge pull request #10316 from marcfehling/fix-vtu-parallel

Update doc for VTKFlags::write_higher_order_cells.

4 years agoremove const and fix type of static_cast 10317/head
Timo Heister [Fri, 22 May 2020 19:10:46 +0000 (15:10 -0400)]
remove const and fix type of static_cast

nvcc with gcc 8 complains that the const here is unnecessary.

4 years agoCI: github actions windows: CMakeError.log 10312/head
Timo Heister [Fri, 22 May 2020 15:33:45 +0000 (11:33 -0400)]
CI: github actions windows: CMakeError.log

always export CMakeError.log

4 years agofix error 10298/head
Timo Heister [Fri, 22 May 2020 19:06:26 +0000 (15:06 -0400)]
fix error

4 years agoupdate readme
Timo Heister [Fri, 22 May 2020 19:04:44 +0000 (15:04 -0400)]
update readme

4 years agoUpdate doc for VTKFlags::write_higher_order_cells. 10316/head
Marc Fehling [Fri, 22 May 2020 18:27:57 +0000 (20:27 +0200)]
Update doc for VTKFlags::write_higher_order_cells.

4 years agoMove a class out of a surrounding class. 10313/head
Wolfgang Bangerth [Fri, 22 May 2020 17:33:02 +0000 (11:33 -0600)]
Move a class out of a surrounding class.

4 years agoMerge pull request #10300 from gassmoeller/add_mapping_to_find_active_cell_around_point
Daniel Arndt [Fri, 22 May 2020 16:26:58 +0000 (12:26 -0400)]
Merge pull request #10300 from gassmoeller/add_mapping_to_find_active_cell_around_point

4 years agoMerge pull request #10306 from bangerth/affine
Martin Kronbichler [Fri, 22 May 2020 14:23:21 +0000 (16:23 +0200)]
Merge pull request #10306 from bangerth/affine

Rename namespace internals:: to internal::AffineConstraints::.

4 years agoMerge pull request #10299 from gassmoeller/improve_find_cell_documentation
Luca Heltai [Fri, 22 May 2020 14:14:09 +0000 (16:14 +0200)]
Merge pull request #10299 from gassmoeller/improve_find_cell_documentation

Refactor GridTools::DistributedComputePointLocations

4 years agoFix a missing mapping argument 10300/head
Rene Gassmoeller [Thu, 21 May 2020 23:50:37 +0000 (16:50 -0700)]
Fix a missing mapping argument

4 years agoMerge pull request #8711 from GrahamBenHarper/graham_dev_fe_poly
Martin Kronbichler [Fri, 22 May 2020 09:46:17 +0000 (11:46 +0200)]
Merge pull request #8711 from GrahamBenHarper/graham_dev_fe_poly

[Post 9.2] Remove PolynomialType template argument from FE_Poly

4 years agoMerge pull request #10302 from bangerth/particles_dataout
Daniel Arndt [Fri, 22 May 2020 03:38:14 +0000 (23:38 -0400)]
Merge pull request #10302 from bangerth/particles_dataout

4 years agoMerge pull request #10303 from bangerth/message
Daniel Arndt [Fri, 22 May 2020 03:37:13 +0000 (23:37 -0400)]
Merge pull request #10303 from bangerth/message

4 years agoMerge pull request #10297 from drwells/remove-cxx11-headers
Daniel Arndt [Fri, 22 May 2020 03:33:15 +0000 (23:33 -0400)]
Merge pull request #10297 from drwells/remove-cxx11-headers

4 years agoRename namespace internals:: to internal::AffineConstraints::. 10306/head
Wolfgang Bangerth [Fri, 22 May 2020 02:34:18 +0000 (20:34 -0600)]
Rename namespace internals:: to internal::AffineConstraints::.

The AffineConstraints class and friends put things into a namespace 'internals'. That's
an uncommon name: We typically use 'internal::'. But a lot of the things in that namespace
also have rather generic names, so do as we often do in such cases: further qualify
the name to indicate what class the internals correspond to.

4 years agoRemove C++11 compatibility headers. 10297/head
David Wells [Thu, 21 May 2020 22:26:25 +0000 (18:26 -0400)]
Remove C++11 compatibility headers.

4 years agoFix a missing space in an error message. 10303/head
Wolfgang Bangerth [Fri, 22 May 2020 00:15:22 +0000 (18:15 -0600)]
Fix a missing space in an error message.

4 years agoDrop a now defaulted template argument. 10302/head
Wolfgang Bangerth [Fri, 22 May 2020 00:14:40 +0000 (18:14 -0600)]
Drop a now defaulted template argument.

4 years agoAdd a changelog entry.
Wolfgang Bangerth [Fri, 22 May 2020 00:13:29 +0000 (18:13 -0600)]
Add a changelog entry.

4 years agoDefault the second template argument of Particles::DataOut.
Wolfgang Bangerth [Fri, 22 May 2020 00:11:56 +0000 (18:11 -0600)]
Default the second template argument of Particles::DataOut.

Like in many other classes, default 'spacedim' to 'dim'.

4 years agoRefactor GridTools::DistributedComputePointLocations 10299/head
Rene Gassmoeller [Thu, 21 May 2020 23:42:41 +0000 (16:42 -0700)]
Refactor GridTools::DistributedComputePointLocations

4 years agoclean up cuda_atomic
Timo Heister [Thu, 21 May 2020 22:44:09 +0000 (18:44 -0400)]
clean up cuda_atomic

4 years agoremove cuda 8 support
Timo Heister [Thu, 21 May 2020 22:29:47 +0000 (18:29 -0400)]
remove cuda 8 support

related to #10296

4 years agoMerge pull request #9868 from jppelteret/ccache_01
Matthias Maier [Thu, 21 May 2020 21:53:08 +0000 (16:53 -0500)]
Merge pull request #9868 from jppelteret/ccache_01

Add documentation on using CCache

4 years agoMerge pull request #10287 from drwells/remove-lapack-templates-header
Daniel Arndt [Thu, 21 May 2020 19:07:47 +0000 (15:07 -0400)]
Merge pull request #10287 from drwells/remove-lapack-templates-header

4 years agoMerge pull request #10294 from bangerth/doc
David Wells [Thu, 21 May 2020 18:55:24 +0000 (14:55 -0400)]
Merge pull request #10294 from bangerth/doc

Random doc improvements.

4 years agoRandom doc improvements. 10294/head
Wolfgang Bangerth [Thu, 21 May 2020 18:30:19 +0000 (12:30 -0600)]
Random doc improvements.

Scenes from my frequent random walks through the library.

4 years agoAdd changelog entry 8711/head
Daniel Arndt [Thu, 21 May 2020 16:51:39 +0000 (12:51 -0400)]
Add changelog entry

4 years agoUpdate test output
Daniel Arndt [Thu, 21 May 2020 16:31:52 +0000 (12:31 -0400)]
Update test output

4 years agoAvoid unnecessary casts
Daniel Arndt [Thu, 21 May 2020 16:31:37 +0000 (12:31 -0400)]
Avoid unnecessary casts

4 years agoFix numbering
Daniel Arndt [Thu, 21 May 2020 16:30:54 +0000 (12:30 -0400)]
Fix numbering

4 years agoIntroduce get_poly_space()
Daniel Arndt [Thu, 21 May 2020 16:26:11 +0000 (12:26 -0400)]
Introduce get_poly_space()

4 years agoFix PolynomialsP
Daniel Arndt [Thu, 21 May 2020 16:19:07 +0000 (12:19 -0400)]
Fix PolynomialsP

4 years agoFix compiling for dim=0
Daniel Arndt [Thu, 21 May 2020 16:16:24 +0000 (12:16 -0400)]
Fix compiling for dim=0

4 years agoFix documentation
Daniel Arndt [Thu, 21 May 2020 16:05:26 +0000 (12:05 -0400)]
Fix documentation

4 years agoImplement compute_*_derivative
Daniel Arndt [Thu, 21 May 2020 16:04:10 +0000 (12:04 -0400)]
Implement compute_*_derivative

4 years agoMerge pull request #10293 from tjhei/master-doxygen-fixes
Matthias Maier [Thu, 21 May 2020 00:14:34 +0000 (19:14 -0500)]
Merge pull request #10293 from tjhei/master-doxygen-fixes

Master doxygen fixes

4 years ago[9.2] fix step-70 doxygen formula 10293/head
Timo Heister [Wed, 20 May 2020 19:59:57 +0000 (15:59 -0400)]
[9.2] fix step-70 doxygen formula

fix broken formula (no & allowed in multline)

4 years agoswitch to mathtt
Timo Heister [Wed, 20 May 2020 20:56:06 +0000 (16:56 -0400)]
switch to mathtt

4 years ago[9.2] fix step-69 doxygen formula
Timo Heister [Wed, 20 May 2020 20:44:38 +0000 (16:44 -0400)]
[9.2] fix step-69 doxygen formula

this works with and without mathjax

4 years agoMerge pull request #10289 from tamiko/fix_python_wrapper_tetss
Timo Heister [Wed, 20 May 2020 20:02:42 +0000 (16:02 -0400)]
Merge pull request #10289 from tamiko/fix_python_wrapper_tetss

contrib/python_wrapper: set environment correctly

4 years agocontrib/python_wrapper: set environment correctly 10289/head
Matthias Maier [Wed, 20 May 2020 19:49:32 +0000 (14:49 -0500)]
contrib/python_wrapper: set environment correctly

4 years agoMerge pull request #10280 from bangerth/70-2
Matthias Maier [Wed, 20 May 2020 19:22:28 +0000 (14:22 -0500)]
Merge pull request #10280 from bangerth/70-2

Link in step-70 pictures and videos.

4 years agoRemove lapack_templates.h from more public headers. 10287/head
David Wells [Wed, 20 May 2020 19:01:22 +0000 (15:01 -0400)]
Remove lapack_templates.h from more public headers.

As mentioned previously, this file can conflict with other packages' LAPACK
wrapper headers. Fortunately we only currently use three LAPACK functions in
headers - its easy enough to special-case these so that we can get rid of the
header inclusion.

Fixes #9135.

4 years agoMerge pull request #10139 from peterrum/dofhandler_policy_distribute_dofs_on_level
Martin Kronbichler [Wed, 20 May 2020 18:44:19 +0000 (20:44 +0200)]
Merge pull request #10139 from peterrum/dofhandler_policy_distribute_dofs_on_level

Simplify internal::DoFHandlerImplementation::Policy::ParallelDistributed::distribute_dofs_on_level()

4 years agoMerge pull request #10283 from MFraters/fix_bug_in_symmetric_tensor_unroll
Daniel Arndt [Wed, 20 May 2020 17:36:07 +0000 (13:36 -0400)]
Merge pull request #10283 from MFraters/fix_bug_in_symmetric_tensor_unroll

4 years agoexpand symmetric tensor 24 test, testing unrolling of component indices for higher... 10283/head
Menno Fraters [Wed, 20 May 2020 06:28:48 +0000 (23:28 -0700)]
expand symmetric tensor 24 test, testing unrolling of component indices for higher dim than 3.

4 years agoMerge pull request #10286 from peterrum/celldata_move_implementation
David Wells [Wed, 20 May 2020 13:20:55 +0000 (09:20 -0400)]
Merge pull request #10286 from peterrum/celldata_move_implementation

Move implementation of CellData to the correct file

4 years agoMove implementation of CellData to the correct file 10286/head
Peter Munch [Wed, 20 May 2020 08:23:36 +0000 (10:23 +0200)]
Move implementation of CellData to the correct file

4 years agofix bug in symmetric tensor unrolled_to_component_indices function.
Menno Fraters [Wed, 20 May 2020 01:59:57 +0000 (18:59 -0700)]
fix bug in symmetric tensor unrolled_to_component_indices function.

4 years agoAlso link in 3d results. 10280/head
Wolfgang Bangerth [Tue, 19 May 2020 21:49:40 +0000 (15:49 -0600)]
Also link in 3d results.

4 years agoLink in step-70 pictures and videos.
Wolfgang Bangerth [Tue, 19 May 2020 18:01:25 +0000 (12:01 -0600)]
Link in step-70 pictures and videos.

4 years agoMerge pull request #10275 from bangerth/70
Martin Kronbichler [Tue, 19 May 2020 18:01:06 +0000 (20:01 +0200)]
Merge pull request #10275 from bangerth/70

More updates to step-70

4 years agoUpdate examples/step-70/parameters_23.prm 10274/head
Luca Heltai [Tue, 19 May 2020 16:39:49 +0000 (18:39 +0200)]
Update examples/step-70/parameters_23.prm

Co-authored-by: Wolfgang Bangerth <bangerth@colostate.edu>
4 years agoMerge pull request #10272 from tjhei/step-70-unused-variable
Matthias Maier [Tue, 19 May 2020 16:30:24 +0000 (11:30 -0500)]
Merge pull request #10272 from tjhei/step-70-unused-variable

step-70: remove unused variable

4 years agoMerge pull request #10271 from tjhei/step-70-fix-petsc
David Wells [Tue, 19 May 2020 15:39:07 +0000 (11:39 -0400)]
Merge pull request #10271 from tjhei/step-70-fix-petsc

step-70: add missing compress() call

4 years agoMerge pull request #10269 from tjhei/step-70-petsc-fix
Daniel Arndt [Tue, 19 May 2020 15:29:59 +0000 (11:29 -0400)]
Merge pull request #10269 from tjhei/step-70-petsc-fix

4 years agoRename a variable in step-70 to better match its intent. 10275/head
Wolfgang Bangerth [Tue, 19 May 2020 14:57:42 +0000 (08:57 -0600)]
Rename a variable in step-70 to better match its intent.


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