]>
https://gitweb.dealii.org/ - dealii-svn.git/log
kanschat [Tue, 15 Feb 2011 17:52:02 +0000 (17:52 +0000)]
remove a problem that bind seems to create a copy of its arguments and does not use references
git-svn-id: https://svn.dealii.org/trunk@23365
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bangerth [Tue, 15 Feb 2011 17:27:04 +0000 (17:27 +0000)]
Fix doc prob.
git-svn-id: https://svn.dealii.org/trunk@23364
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bangerth [Tue, 15 Feb 2011 15:28:49 +0000 (15:28 +0000)]
Fix grammar fail.
git-svn-id: https://svn.dealii.org/trunk@23362
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bangerth [Tue, 15 Feb 2011 15:23:14 +0000 (15:23 +0000)]
Simplify a couple of places.
git-svn-id: https://svn.dealii.org/trunk@23361
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kanschat [Tue, 15 Feb 2011 15:00:53 +0000 (15:00 +0000)]
move meshworker to new integrators directory
git-svn-id: https://svn.dealii.org/trunk@23360
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kanschat [Tue, 15 Feb 2011 14:58:58 +0000 (14:58 +0000)]
remove unused parameter
git-svn-id: https://svn.dealii.org/trunk@23359
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bangerth [Mon, 14 Feb 2011 19:53:13 +0000 (19:53 +0000)]
Minor text fix.
git-svn-id: https://svn.dealii.org/trunk@23358
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young [Mon, 14 Feb 2011 08:58:41 +0000 (08:58 +0000)]
Fix hyperlink
git-svn-id: https://svn.dealii.org/trunk@23357
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bangerth [Sun, 13 Feb 2011 23:10:30 +0000 (23:10 +0000)]
Make condition work also if
parameters.graphical_output_interval==1. Fix possible range for this parameter.
git-svn-id: https://svn.dealii.org/trunk@23353
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bangerth [Sun, 13 Feb 2011 23:08:16 +0000 (23:08 +0000)]
Also produce output after the last time step.
git-svn-id: https://svn.dealii.org/trunk@23352
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bangerth [Sun, 13 Feb 2011 22:37:10 +0000 (22:37 +0000)]
Make the number of time steps between mesh refinement a parameter.
git-svn-id: https://svn.dealii.org/trunk@23351
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bangerth [Sun, 13 Feb 2011 22:31:07 +0000 (22:31 +0000)]
Abort the program if the input file could not be read.
git-svn-id: https://svn.dealii.org/trunk@23350
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bangerth [Sun, 13 Feb 2011 19:18:13 +0000 (19:18 +0000)]
Change the formula to place interior nodes in the new part of the GridGenerator::hyper_shell function.
git-svn-id: https://svn.dealii.org/trunk@23349
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heister [Sun, 13 Feb 2011 16:28:29 +0000 (16:28 +0000)]
step-32: fix extrapolation. It triggered an exception in debug mode about sadd() with ghosted vectors.
git-svn-id: https://svn.dealii.org/trunk@23348
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bangerth [Sun, 13 Feb 2011 05:03:08 +0000 (05:03 +0000)]
Use a better coarse mesh.
git-svn-id: https://svn.dealii.org/trunk@23347
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bangerth [Sat, 12 Feb 2011 14:09:17 +0000 (14:09 +0000)]
Fix file name.
git-svn-id: https://svn.dealii.org/trunk@23346
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bangerth [Sat, 12 Feb 2011 13:59:24 +0000 (13:59 +0000)]
Add another couple pictures.
git-svn-id: https://svn.dealii.org/trunk@23345
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bangerth [Sat, 12 Feb 2011 13:57:27 +0000 (13:57 +0000)]
Crop.
git-svn-id: https://svn.dealii.org/trunk@23344
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bangerth [Sat, 12 Feb 2011 13:56:44 +0000 (13:56 +0000)]
Add.
git-svn-id: https://svn.dealii.org/trunk@23343
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bangerth [Sat, 12 Feb 2011 13:55:42 +0000 (13:55 +0000)]
Document GridGenerator::hyper_shell.
git-svn-id: https://svn.dealii.org/trunk@23342
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bangerth [Sat, 12 Feb 2011 13:54:30 +0000 (13:54 +0000)]
Adjust output.
git-svn-id: https://svn.dealii.org/trunk@23341
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bangerth [Sat, 12 Feb 2011 13:53:51 +0000 (13:53 +0000)]
Fix hypershell 96.
git-svn-id: https://svn.dealii.org/trunk@23340
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bangerth [Fri, 11 Feb 2011 16:03:48 +0000 (16:03 +0000)]
First version of the 96-cell hypersphere. Doesn't work completely yet, but a start to finish while I'm on campus later.
git-svn-id: https://svn.dealii.org/trunk@23339
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bangerth [Fri, 11 Feb 2011 15:45:38 +0000 (15:45 +0000)]
Override qmake's default for XCode on Mac OS X.
git-svn-id: https://svn.dealii.org/trunk@23338
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bangerth [Fri, 11 Feb 2011 15:08:30 +0000 (15:08 +0000)]
Another test.
git-svn-id: https://svn.dealii.org/trunk@23337
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bangerth [Fri, 11 Feb 2011 15:04:05 +0000 (15:04 +0000)]
Add test.
git-svn-id: https://svn.dealii.org/trunk@23336
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bangerth [Fri, 11 Feb 2011 14:52:44 +0000 (14:52 +0000)]
Fix poor design of test: opening a file twice and writing into both streams is not likely to lead to anything good.
git-svn-id: https://svn.dealii.org/trunk@23335
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bangerth [Fri, 11 Feb 2011 14:47:38 +0000 (14:47 +0000)]
Add comment.
git-svn-id: https://svn.dealii.org/trunk@23334
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bangerth [Fri, 11 Feb 2011 04:18:50 +0000 (04:18 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@23333
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bangerth [Fri, 11 Feb 2011 04:06:56 +0000 (04:06 +0000)]
Some more minor edits.
git-svn-id: https://svn.dealii.org/trunk@23332
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bangerth [Fri, 11 Feb 2011 04:04:23 +0000 (04:04 +0000)]
Minor edits.
git-svn-id: https://svn.dealii.org/trunk@23331
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bangerth [Fri, 11 Feb 2011 03:53:35 +0000 (03:53 +0000)]
Disallow a whole bunch of functions that modify vectors if we have
ghosted elements.
git-svn-id: https://svn.dealii.org/trunk@23330
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bangerth [Fri, 11 Feb 2011 03:43:51 +0000 (03:43 +0000)]
Modify the implementation of second_invariant. The old implementation
was difficult to understand (thought correct) and certainly not efficient.
git-svn-id: https://svn.dealii.org/trunk@23329
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bangerth [Fri, 11 Feb 2011 03:40:45 +0000 (03:40 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@23328
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bangerth [Fri, 11 Feb 2011 03:19:07 +0000 (03:19 +0000)]
Set properties correctly.
git-svn-id: https://svn.dealii.org/trunk@23327
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bangerth [Fri, 11 Feb 2011 03:17:54 +0000 (03:17 +0000)]
Add new test.
git-svn-id: https://svn.dealii.org/trunk@23326
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bangerth [Fri, 11 Feb 2011 02:49:29 +0000 (02:49 +0000)]
Fix a bug and add a testcase for VectorTools::compute_mean_value.
git-svn-id: https://svn.dealii.org/trunk@23325
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bangerth [Thu, 10 Feb 2011 15:19:06 +0000 (15:19 +0000)]
Documentation updates.
git-svn-id: https://svn.dealii.org/trunk@23324
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bangerth [Thu, 10 Feb 2011 13:44:29 +0000 (13:44 +0000)]
Use 'qmake -unix', not 'qmake --unix'.
git-svn-id: https://svn.dealii.org/trunk@23323
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bangerth [Thu, 10 Feb 2011 00:03:00 +0000 (00:03 +0000)]
Use 'qmake --unix' so that we get a unix makefile even on Mac OS X.
git-svn-id: https://svn.dealii.org/trunk@23322
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bangerth [Wed, 9 Feb 2011 23:59:36 +0000 (23:59 +0000)]
Use 'mktemp' in a portable way: on OS X, mktemp requires a template argument,
but if we give a template, linux requires providing a path. So specify a
template, and use ${TMPDIR:-/tmp} as this path (i.e. use TMPDIR if it is set,
and /tmp otherwise).
git-svn-id: https://svn.dealii.org/trunk@23321
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bangerth [Wed, 9 Feb 2011 17:25:38 +0000 (17:25 +0000)]
Do not only check for presence of the libz.so file, but also for zlib.h.
git-svn-id: https://svn.dealii.org/trunk@23320
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bangerth [Wed, 9 Feb 2011 17:18:06 +0000 (17:18 +0000)]
Minor edit.
git-svn-id: https://svn.dealii.org/trunk@23319
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bangerth [Wed, 9 Feb 2011 17:02:49 +0000 (17:02 +0000)]
Write a results section.
git-svn-id: https://svn.dealii.org/trunk@23318
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bangerth [Wed, 9 Feb 2011 16:56:39 +0000 (16:56 +0000)]
Finish writing.
git-svn-id: https://svn.dealii.org/trunk@23317
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bangerth [Wed, 9 Feb 2011 15:46:38 +0000 (15:46 +0000)]
Give a bit of an introduction to the library's documentation.
git-svn-id: https://svn.dealii.org/trunk@23316
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bangerth [Wed, 9 Feb 2011 15:39:57 +0000 (15:39 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@23315
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bangerth [Wed, 9 Feb 2011 15:30:57 +0000 (15:30 +0000)]
Compute restriction and prolongation matrices for DGQ elements also if dim<spacedim.
git-svn-id: https://svn.dealii.org/trunk@23314
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bangerth [Wed, 9 Feb 2011 15:26:38 +0000 (15:26 +0000)]
Say a couple more things.
git-svn-id: https://svn.dealii.org/trunk@23313
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bangerth [Wed, 9 Feb 2011 15:08:04 +0000 (15:08 +0000)]
Remove some commented out code that should have been removed months ago.
git-svn-id: https://svn.dealii.org/trunk@23312
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bangerth [Wed, 9 Feb 2011 14:39:18 +0000 (14:39 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@23311
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bangerth [Wed, 9 Feb 2011 14:27:12 +0000 (14:27 +0000)]
Document previous patch.
git-svn-id: https://svn.dealii.org/trunk@23310
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bangerth [Wed, 9 Feb 2011 14:19:48 +0000 (14:19 +0000)]
Set properties correctly.
git-svn-id: https://svn.dealii.org/trunk@23309
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bangerth [Wed, 9 Feb 2011 14:15:50 +0000 (14:15 +0000)]
Fix a problem with refining surfaces.
git-svn-id: https://svn.dealii.org/trunk@23308
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bangerth [Wed, 9 Feb 2011 13:29:40 +0000 (13:29 +0000)]
Fix number.
git-svn-id: https://svn.dealii.org/trunk@23307
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bangerth [Tue, 8 Feb 2011 21:23:51 +0000 (21:23 +0000)]
More of an intro than just a sentence.
git-svn-id: https://svn.dealii.org/trunk@23306
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bangerth [Tue, 8 Feb 2011 20:54:56 +0000 (20:54 +0000)]
So if we really need to introduce CompressedSparsityPattern already in
step-2 (which I don't think we need), then shouldn't we at least do
this in both places where SparsityPattern is used?
git-svn-id: https://svn.dealii.org/trunk@23305
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bangerth [Tue, 8 Feb 2011 15:15:03 +0000 (15:15 +0000)]
Add a paragraph of possible extensions.
git-svn-id: https://svn.dealii.org/trunk@23304
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bangerth [Tue, 8 Feb 2011 14:41:04 +0000 (14:41 +0000)]
Use a slightly different preconditioner: the diagonal part of the
eps:eps form, instead of the (already diagonal) grad:grad form. This
doesn't make a difference here, but cut the number of inner iterations
in Jennifer's (nonlinear) testcase using BiCGStab by approximately 1/4
(e.g. from 40 to 30).
git-svn-id: https://svn.dealii.org/trunk@23303
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bangerth [Mon, 7 Feb 2011 16:31:37 +0000 (16:31 +0000)]
Make VectorTools::compute_mean_value and VectorTools::integrate_difference also work in parallel.
git-svn-id: https://svn.dealii.org/trunk@23302
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bangerth [Sun, 6 Feb 2011 22:40:00 +0000 (22:40 +0000)]
Grammar fail.
git-svn-id: https://svn.dealii.org/trunk@23300
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heister [Sun, 6 Feb 2011 20:38:55 +0000 (20:38 +0000)]
step-32: rescale 3d starting value to avoid artifacts at the +/- z poles
git-svn-id: https://svn.dealii.org/trunk@23299
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bangerth [Sun, 6 Feb 2011 17:20:58 +0000 (17:20 +0000)]
Make a number of things runtime parameters that we can read from an input file.
git-svn-id: https://svn.dealii.org/trunk@23298
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heister [Sun, 6 Feb 2011 16:38:39 +0000 (16:38 +0000)]
implement mean_value() for PETScWrappers::MPI::Vector.
git-svn-id: https://svn.dealii.org/trunk@23297
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heister [Sun, 6 Feb 2011 16:16:11 +0000 (16:16 +0000)]
step-32: smaller step size in 3d.
git-svn-id: https://svn.dealii.org/trunk@23296
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heister [Sun, 6 Feb 2011 15:57:49 +0000 (15:57 +0000)]
Avoid deadlock in Utilities:MPI_InitFinalize when an exception is being thrown.
git-svn-id: https://svn.dealii.org/trunk@23295
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pelteret [Sat, 5 Feb 2011 21:52:37 +0000 (21:52 +0000)]
Step-44: Removed static keyword from FEValues object in error_dil(). Added correct parameters file.
git-svn-id: https://svn.dealii.org/trunk@23294
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bangerth [Sat, 5 Feb 2011 18:02:56 +0000 (18:02 +0000)]
Set -rpath for Trilinos. This doesn't currently help since the Trilinos libs
aren't compiled with -rpath themselves (so their references to each other
fail) but it is still a step in the right direction.
git-svn-id: https://svn.dealii.org/trunk@23293
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bangerth [Sat, 5 Feb 2011 16:44:26 +0000 (16:44 +0000)]
Fix another place with the same problem.
git-svn-id: https://svn.dealii.org/trunk@23292
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bangerth [Sat, 5 Feb 2011 16:33:58 +0000 (16:33 +0000)]
The expander program can only handle block comments that start and end in a
single line, but this file had one that didn't. I wonder how that never was a
problem over the last couple of weeks...
git-svn-id: https://svn.dealii.org/trunk@23291
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bangerth [Sat, 5 Feb 2011 16:31:38 +0000 (16:31 +0000)]
Put NSF notice in a @note.
git-svn-id: https://svn.dealii.org/trunk@23290
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bonito [Sat, 5 Feb 2011 15:37:50 +0000 (15:37 +0000)]
Modified acknolwedgments
git-svn-id: https://svn.dealii.org/trunk@23289
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bonito [Sat, 5 Feb 2011 15:25:52 +0000 (15:25 +0000)]
added support
git-svn-id: https://svn.dealii.org/trunk@23288
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bangerth [Sat, 5 Feb 2011 06:35:30 +0000 (06:35 +0000)]
Update a comment.
git-svn-id: https://svn.dealii.org/trunk@23287
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bangerth [Sat, 5 Feb 2011 02:40:22 +0000 (02:40 +0000)]
Grammar fix.
git-svn-id: https://svn.dealii.org/trunk@23286
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bangerth [Sat, 5 Feb 2011 00:25:42 +0000 (00:25 +0000)]
Document the extent of space savings when compressing data.
git-svn-id: https://svn.dealii.org/trunk@23285
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heister [Fri, 4 Feb 2011 14:11:56 +0000 (14:11 +0000)]
step-32: credit myself.
git-svn-id: https://svn.dealii.org/trunk@23284
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bangerth [Mon, 31 Jan 2011 23:35:30 +0000 (23:35 +0000)]
Make compilation die if expand_instantiations fails.
git-svn-id: https://svn.dealii.org/trunk@23282
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bangerth [Mon, 31 Jan 2011 18:34:34 +0000 (18:34 +0000)]
Add one more.
git-svn-id: https://svn.dealii.org/trunk@23281
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bangerth [Mon, 31 Jan 2011 17:30:33 +0000 (17:30 +0000)]
Undo previous check-in for this file -- it resulted from a patch that was accidentally not committed yet.
git-svn-id: https://svn.dealii.org/trunk@23280
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bangerth [Mon, 31 Jan 2011 17:28:57 +0000 (17:28 +0000)]
Fix stupid mistake: one can't assume that blocks are less than 32k :-(
git-svn-id: https://svn.dealii.org/trunk@23279
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bangerth [Mon, 31 Jan 2011 15:41:05 +0000 (15:41 +0000)]
Use output from c0541.
git-svn-id: https://svn.dealii.org/trunk@23278
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young [Mon, 31 Jan 2011 12:07:25 +0000 (12:07 +0000)]
Removed rogue 5D from slepc_solver
git-svn-id: https://svn.dealii.org/trunk@23277
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young [Mon, 31 Jan 2011 11:21:36 +0000 (11:21 +0000)]
Fixed dangerous bug in index counter
git-svn-id: https://svn.dealii.org/trunk@23276
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bangerth [Mon, 31 Jan 2011 03:40:41 +0000 (03:40 +0000)]
Follow the usual naming convection: use "boundary" instead of "bdry".
git-svn-id: https://svn.dealii.org/trunk@23275
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buerg [Sun, 30 Jan 2011 07:21:51 +0000 (07:21 +0000)]
Documentation changes.
git-svn-id: https://svn.dealii.org/trunk@23274
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bangerth [Sat, 29 Jan 2011 03:24:41 +0000 (03:24 +0000)]
Undo r23269 since one can't compile the library any more since that change.
git-svn-id: https://svn.dealii.org/trunk@23273
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bangerth [Fri, 28 Jan 2011 19:48:13 +0000 (19:48 +0000)]
Update.
git-svn-id: https://svn.dealii.org/trunk@23272
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bangerth [Fri, 28 Jan 2011 18:50:38 +0000 (18:50 +0000)]
Link the library first on the local file system, and then move the result into its final destination.
git-svn-id: https://svn.dealii.org/trunk@23271
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bangerth [Fri, 28 Jan 2011 18:48:06 +0000 (18:48 +0000)]
Write data in VTU format compressed, if possible.
git-svn-id: https://svn.dealii.org/trunk@23270
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buerg [Fri, 28 Jan 2011 16:30:59 +0000 (16:30 +0000)]
Fixed interface for MUMPS.
git-svn-id: https://svn.dealii.org/trunk@23269
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kronbichler [Thu, 27 Jan 2011 14:07:20 +0000 (14:07 +0000)]
Extrapolate Stokes solution since this reduces the number of iterations in the linear solver.
git-svn-id: https://svn.dealii.org/trunk@23268
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bangerth [Thu, 27 Jan 2011 00:26:59 +0000 (00:26 +0000)]
Add another one.
git-svn-id: https://svn.dealii.org/trunk@23267
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heister [Wed, 26 Jan 2011 14:38:34 +0000 (14:38 +0000)]
fix test and also check if all machines think the vector is ghosted.
git-svn-id: https://svn.dealii.org/trunk@23266
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heister [Wed, 26 Jan 2011 14:25:45 +0000 (14:25 +0000)]
introduce has_ghost_elements() for Trilinos and PETSc vectors.
git-svn-id: https://svn.dealii.org/trunk@23265
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heister [Wed, 26 Jan 2011 12:54:01 +0000 (12:54 +0000)]
step-31: simplify min/max calculation.
git-svn-id: https://svn.dealii.org/trunk@23264
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heister [Wed, 26 Jan 2011 08:02:09 +0000 (08:02 +0000)]
step-32: correct comment and cleanup calculation of get_extrapolated_temperature_range().
git-svn-id: https://svn.dealii.org/trunk@23263
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bangerth [Tue, 25 Jan 2011 14:38:23 +0000 (14:38 +0000)]
Restore original behavior.
git-svn-id: https://svn.dealii.org/trunk@23262
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heister [Tue, 25 Jan 2011 13:55:45 +0000 (13:55 +0000)]
typo in publications.
git-svn-id: https://svn.dealii.org/trunk@23261
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bangerth [Tue, 25 Jan 2011 04:46:39 +0000 (04:46 +0000)]
Arg. Fix conditionals.
git-svn-id: https://svn.dealii.org/trunk@23260
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