]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
3 years agofix indentation 12246/head
Mathias Anselmann [Fri, 21 May 2021 19:38:31 +0000 (21:38 +0200)]
fix indentation

3 years agofixec preprocessor directive
Mathias Anselmann [Fri, 21 May 2021 19:21:38 +0000 (21:21 +0200)]
fixec preprocessor directive

3 years agoadd preprocessor directive to restrict changes to GCC >= 11 and Intel compilers
Mathias Anselmann [Fri, 21 May 2021 18:59:59 +0000 (20:59 +0200)]
add preprocessor directive to restrict changes to GCC >= 11 and Intel compilers

3 years agoadded copy and move constructors / assignment operators to fix compilation issues...
Mathias Anselmann [Tue, 18 May 2021 18:40:54 +0000 (20:40 +0200)]
added copy and move constructors / assignment operators to fix compilation issues with gcc 11.1

3 years agoMerge pull request #12258 from gfcas/step_66_update
Wolfgang Bangerth [Thu, 20 May 2021 19:22:14 +0000 (13:22 -0600)]
Merge pull request #12258 from gfcas/step_66_update

Step 66 minor doc update

3 years agoMerge pull request #12264 from mathsen/preparation_gcc_11
Wolfgang Bangerth [Thu, 20 May 2021 19:21:06 +0000 (13:21 -0600)]
Merge pull request #12264 from mathsen/preparation_gcc_11

small changes which resulted in problems when merging a GCC 11 fix

3 years agosmall changes which resulted in problems when merging a GCC 11 fix 12264/head
Mathias Anselmann [Thu, 20 May 2021 16:51:38 +0000 (18:51 +0200)]
small changes which resulted in problems when merging a GCC 11 fix

3 years agoMerge pull request #12259 from bangerth/35
David Wells [Thu, 20 May 2021 16:07:42 +0000 (12:07 -0400)]
Merge pull request #12259 from bangerth/35

Link to new image files in step-35

3 years agoLink to new image files. 12259/head
Wolfgang Bangerth [Thu, 20 May 2021 14:53:15 +0000 (08:53 -0600)]
Link to new image files.

3 years agoIntro add note on reuse mg_transfer 12258/head
Fabian Castelli [Thu, 20 May 2021 13:11:02 +0000 (15:11 +0200)]
Intro add note on reuse mg_transfer

3 years agoIndent intro code snippets
Fabian Castelli [Thu, 20 May 2021 13:09:32 +0000 (15:09 +0200)]
Indent intro code snippets

3 years agoFix solution figure size
Fabian Castelli [Thu, 20 May 2021 13:07:24 +0000 (15:07 +0200)]
Fix solution figure size

3 years agoMerge pull request #12256 from drwells/fix-gcc11-compilation
Marc Fehling [Thu, 20 May 2021 04:06:54 +0000 (22:06 -0600)]
Merge pull request #12256 from drwells/fix-gcc11-compilation

Fix compilation with GCC11 and minimal dependencies.

3 years agoMerge pull request #12257 from bangerth/35
Marc Fehling [Thu, 20 May 2021 02:54:58 +0000 (20:54 -0600)]
Merge pull request #12257 from bangerth/35

Fix width of pictures.

3 years agoFix width of pictures. 12257/head
Wolfgang Bangerth [Wed, 19 May 2021 22:37:02 +0000 (16:37 -0600)]
Fix width of pictures.

3 years agoMerge pull request #12255 from drwells/gcc11-nedelec-warnings
Daniel Arndt [Wed, 19 May 2021 20:12:13 +0000 (16:12 -0400)]
Merge pull request #12255 from drwells/gcc11-nedelec-warnings

Fix some GCC11 warnings.

3 years agoFix compilation with GCC11 and minimal dependencies. 12256/head
David Wells [Wed, 19 May 2021 20:11:49 +0000 (16:11 -0400)]
Fix compilation with GCC11 and minimal dependencies.

3 years agoFix some GCC11 warnings. 12255/head
David Wells [Wed, 19 May 2021 17:00:24 +0000 (13:00 -0400)]
Fix some GCC11 warnings.

3 years agoMerge pull request #12250 from peterrum/particles_lost
David Wells [Wed, 19 May 2021 15:13:30 +0000 (11:13 -0400)]
Merge pull request #12250 from peterrum/particles_lost

Fix ParticleHandler::sort_particles_into_subdomains_and_cells() for lost particles

3 years agoMerge pull request #12253 from gfcas/add_changelog_step_66
David Wells [Wed, 19 May 2021 14:53:01 +0000 (10:53 -0400)]
Merge pull request #12253 from gfcas/add_changelog_step_66

Add changelog entry for step-66

3 years agoMerge pull request #12251 from kronbichler/fix_warning_array_bounds
Daniel Arndt [Wed, 19 May 2021 14:33:19 +0000 (10:33 -0400)]
Merge pull request #12251 from kronbichler/fix_warning_array_bounds

MappingQGeneric: Fix warning about array bounds

3 years agoAdd changelog entry 12253/head
Fabian Castelli [Wed, 19 May 2021 12:54:20 +0000 (14:54 +0200)]
Add changelog entry

3 years agoMerge pull request #12249 from peterrum/vector_tools_include
Martin Kronbichler [Wed, 19 May 2021 10:53:30 +0000 (12:53 +0200)]
Merge pull request #12249 from peterrum/vector_tools_include

Include file in vector_tools.h

3 years agoMappingQGeneric: Fix warning about array bounds 12251/head
Martin Kronbichler [Wed, 19 May 2021 10:46:23 +0000 (12:46 +0200)]
MappingQGeneric: Fix warning about array bounds

3 years agoFix ParticleHandler::sort_particles_into_subdomains_and_cells() for lost particles 12250/head
Peter Munch [Wed, 19 May 2021 06:41:03 +0000 (08:41 +0200)]
Fix ParticleHandler::sort_particles_into_subdomains_and_cells() for lost particles

3 years agoInclude file in vector_tools.h 12249/head
Peter Munch [Wed, 19 May 2021 04:40:52 +0000 (06:40 +0200)]
Include file in vector_tools.h

3 years agoMerge pull request #12245 from peterrum/fpe_mf
Peter Munch [Wed, 19 May 2021 05:47:55 +0000 (07:47 +0200)]
Merge pull request #12245 from peterrum/fpe_mf

 Move FEPointEvaluation from fe to matrix_free

3 years agoMerge pull request #12234 from masterleinad/fix_particles
Martin Kronbichler [Wed, 19 May 2021 05:08:08 +0000 (07:08 +0200)]
Merge pull request #12234 from masterleinad/fix_particles

Add assert for ParticleHandler when particles to be inserted are not found

3 years agoMerge pull request #12239 from tamiko/pr_12201
Peter Munch [Wed, 19 May 2021 04:13:05 +0000 (06:13 +0200)]
Merge pull request #12239 from tamiko/pr_12201

Merge step-66 - rebased and squashed development branch

3 years agoMove FEPointEvaluation from fe to matrix_free 12245/head
Peter Munch [Tue, 18 May 2021 19:40:42 +0000 (21:40 +0200)]
Move FEPointEvaluation from fe to matrix_free

3 years agoMerge pull request #12236 from kronbichler/refactor_fe_point_evaluation
David Wells [Tue, 18 May 2021 22:43:32 +0000 (18:43 -0400)]
Merge pull request #12236 from kronbichler/refactor_fe_point_evaluation

Refactor FEPointEvaluation

3 years agoMerge pull request #12199 from peterrum/ca_requesting_processes
Martin Kronbichler [Tue, 18 May 2021 21:30:47 +0000 (23:30 +0200)]
Merge pull request #12199 from peterrum/ca_requesting_processes

Allow to enforce unique mapping in RemotePointEvaluation

3 years agoreindent code 12239/head
Matthias Maier [Tue, 18 May 2021 16:22:52 +0000 (11:22 -0500)]
reindent code

3 years agostep-66: Implement entire step-66
Fabian Castelli [Tue, 21 May 2019 10:33:29 +0000 (12:33 +0200)]
step-66: Implement entire step-66

3 years agostep-66: a nonlinear, parallel matrix-free example [WIP]
Timo Heister [Fri, 17 May 2019 16:34:02 +0000 (10:34 -0600)]
step-66: a nonlinear, parallel matrix-free example [WIP]

I am working with Fabian Castelli on a nonlinear, parallel, matrix-free
tutorial. Because this is the second time my chosen tutorial number was
taken, I would like to reserve it with this PR.

3 years agoMerge pull request #12243 from brynbarker/step35
Matthias Maier [Tue, 18 May 2021 19:53:18 +0000 (14:53 -0500)]
Merge pull request #12243 from brynbarker/step35

logged step 35 update

3 years agoRefactor FEPointEvaluation 12236/head
Martin Kronbichler [Tue, 18 May 2021 14:05:49 +0000 (16:05 +0200)]
Refactor FEPointEvaluation

3 years agoMerge pull request #12238 from drwells/typos-9.3
Matthias Maier [Tue, 18 May 2021 19:08:52 +0000 (14:08 -0500)]
Merge pull request #12238 from drwells/typos-9.3

Typos 9.3

3 years agoMerge pull request #12242 from peterrum/fpe_log
Peter Munch [Tue, 18 May 2021 19:04:50 +0000 (21:04 +0200)]
Merge pull request #12242 from peterrum/fpe_log

FEPointEvaluation: add change-log entry

3 years agoMerge pull request #12233 from kronbichler/optimize_fe_point_evaluation_integrate
Peter Munch [Tue, 18 May 2021 18:40:09 +0000 (20:40 +0200)]
Merge pull request #12233 from kronbichler/optimize_fe_point_evaluation_integrate

Optimize FEPointEvaluation::integrate() with tensor product path

3 years agoMerge pull request #12240 from tamiko/remove_entries
Daniel Arndt [Tue, 18 May 2021 18:31:11 +0000 (14:31 -0400)]
Merge pull request #12240 from tamiko/remove_entries

remove placeholder changes entries

3 years agoFEPointEvaluation: add change-log entry 12242/head
Peter Munch [Tue, 18 May 2021 17:40:44 +0000 (19:40 +0200)]
FEPointEvaluation: add change-log entry

3 years agologged step 35 update 12243/head
Bryn Balls-Barker [Tue, 18 May 2021 17:35:53 +0000 (13:35 -0400)]
logged step 35 update

3 years agoDisable particle tests for codimension 1 12234/head
Daniel Arndt [Tue, 18 May 2021 16:32:24 +0000 (12:32 -0400)]
Disable particle tests for codimension 1

3 years agoremove placeholder changes entries 12240/head
Matthias Maier [Tue, 18 May 2021 16:02:51 +0000 (11:02 -0500)]
remove placeholder changes entries

3 years agoMerge pull request #12221 from kronbichler/fix_fe_field_function
Daniel Arndt [Tue, 18 May 2021 15:43:47 +0000 (11:43 -0400)]
Merge pull request #12221 from kronbichler/fix_fe_field_function

3 years agoAdd assert to compute_point_locations_try_all
Daniel Arndt [Tue, 18 May 2021 12:58:00 +0000 (08:58 -0400)]
Add assert to compute_point_locations_try_all

3 years agoRun codespell 12238/head
David Wells [Tue, 18 May 2021 15:02:43 +0000 (11:02 -0400)]
Run codespell

3 years agoFix double-word typos
David Wells [Tue, 18 May 2021 14:49:49 +0000 (10:49 -0400)]
Fix double-word typos

3 years agoRemove second-order Nedelec and Raviart-Thomas elements 12221/head
Martin Kronbichler [Tue, 18 May 2021 08:25:19 +0000 (10:25 +0200)]
Remove second-order Nedelec and Raviart-Thomas elements

3 years agoFEFieldFunction: Detect case when some points were not found
Martin Kronbichler [Sun, 16 May 2021 20:13:13 +0000 (22:13 +0200)]
FEFieldFunction: Detect case when some points were not found

3 years agoAllow to enforce unique mapping in RemotePointEvaluation 12199/head
Peter Munch [Wed, 12 May 2021 16:54:06 +0000 (18:54 +0200)]
Allow to enforce unique mapping in RemotePointEvaluation

3 years agoCode optimization: Switch some loop bounds in hot loops to int 12233/head
Martin Kronbichler [Tue, 18 May 2021 07:55:04 +0000 (09:55 +0200)]
Code optimization: Switch some loop bounds in hot loops to int

3 years agoMerge pull request #12211 from peterrum/reinit_polynomial_transfer_diff
Martin Kronbichler [Tue, 18 May 2021 07:57:04 +0000 (09:57 +0200)]
Merge pull request #12211 from peterrum/reinit_polynomial_transfer_diff

Accept differently partioned Triangulations in MGTwoLevelTransfer::reinit_polynomial_transfer()

3 years agoOptimize FEPointEvaluation::integrate() with tensor product path
Martin Kronbichler [Mon, 17 May 2021 17:41:57 +0000 (19:41 +0200)]
Optimize FEPointEvaluation::integrate() with tensor product path

3 years agoMerge pull request #12235 from peterrum/fpe_zero
Peter Munch [Tue, 18 May 2021 06:29:42 +0000 (08:29 +0200)]
Merge pull request #12235 from peterrum/fpe_zero

FEPointEvaluation::integrate(): zero out solution array also if no points given

3 years agoMerge pull request #12214 from jppelteret/vectorization_math_01
Peter Munch [Tue, 18 May 2021 05:11:57 +0000 (07:11 +0200)]
Merge pull request #12214 from jppelteret/vectorization_math_01

Add some more vectorisation math functions

3 years agoFEPointEvaluation::integrate(): zero out solution array also if no points given 12235/head
Maximilian Bergbauer [Tue, 18 May 2021 04:31:30 +0000 (06:31 +0200)]
FEPointEvaluation::integrate(): zero out solution array also if no points given

3 years agoMerge pull request #12229 from peterrum/n_vector_tests
Bruno Turcksin [Tue, 18 May 2021 00:21:42 +0000 (20:21 -0400)]
Merge pull request #12229 from peterrum/n_vector_tests

Test new methods of n_vector

3 years agoMerge pull request #12160 from peterrum/simplex_examples
David Wells [Mon, 17 May 2021 22:12:11 +0000 (18:12 -0400)]
Merge pull request #12160 from peterrum/simplex_examples

Add simplex/mixed mesh examples to simplex module page

3 years agoMerge pull request #12230 from peterrum/sudials_copy
David Wells [Mon, 17 May 2021 22:11:18 +0000 (18:11 -0400)]
Merge pull request #12230 from peterrum/sudials_copy

Remove sundials/copy.h

3 years agoUpdate source/particles/particle_handler.cc
Daniel Arndt [Mon, 17 May 2021 20:29:26 +0000 (16:29 -0400)]
Update source/particles/particle_handler.cc

Co-authored-by: Marc Fehling <mafehling.git@gmail.com>
3 years agoMerge pull request #12232 from kronbichler/bugfix_point_eval_linear
David Wells [Mon, 17 May 2021 20:05:53 +0000 (16:05 -0400)]
Merge pull request #12232 from kronbichler/bugfix_point_eval_linear

Fix bug in FEPointEvaluation for certain linear functions

3 years agoTest new methods of n_vector 12229/head
Peter Munch [Mon, 17 May 2021 13:17:04 +0000 (15:17 +0200)]
Test new methods of n_vector

3 years agoRemove sudials/copy.h 12230/head
Peter Munch [Mon, 17 May 2021 13:28:11 +0000 (15:28 +0200)]
Remove sudials/copy.h

3 years agoMerge pull request #12200 from luca-heltai/ida-with-sundials-ge-4.0.0
Peter Munch [Mon, 17 May 2021 19:15:49 +0000 (21:15 +0200)]
Merge pull request #12200 from luca-heltai/ida-with-sundials-ge-4.0.0

Make IDA work with new sundials.

3 years agoAdd simplex/mixed mesh examples to simplex module page 12160/head
Peter Munch [Sun, 9 May 2021 10:02:04 +0000 (12:02 +0200)]
Add simplex/mixed mesh examples to simplex module page

3 years agoAdd assert for ParticleHandler
Daniel Arndt [Mon, 17 May 2021 16:59:59 +0000 (12:59 -0400)]
Add assert for ParticleHandler

3 years agoMerge pull request #12227 from luca-heltai/fix-dirac
Martin Kronbichler [Mon, 17 May 2021 18:09:26 +0000 (20:09 +0200)]
Merge pull request #12227 from luca-heltai/fix-dirac

Fixed gradient of tensor product cutoff.

3 years agoMerge pull request #12226 from peterrum/find_active_cell_around_point_artificial
Martin Kronbichler [Mon, 17 May 2021 18:08:15 +0000 (20:08 +0200)]
Merge pull request #12226 from peterrum/find_active_cell_around_point_artificial

Add comment to find_active_cell_around_point()

3 years agoMerge pull request #12215 from peterrum/fpe_0_test
Martin Kronbichler [Mon, 17 May 2021 18:06:59 +0000 (20:06 +0200)]
Merge pull request #12215 from peterrum/fpe_0_test

FEPointEvaluation: test FE_DGQ(0)

3 years agoAdd tests for linear shape functions 12232/head
Martin Kronbichler [Mon, 17 May 2021 17:36:36 +0000 (19:36 +0200)]
Add tests for linear shape functions

3 years agoFix bug in FEPointEvaluation for certain linear functions
Martin Kronbichler [Mon, 17 May 2021 17:35:59 +0000 (19:35 +0200)]
Fix bug in FEPointEvaluation for certain linear functions

3 years agoRestructured and renamed functions. 12200/head
Luca Heltai [Sun, 16 May 2021 09:11:52 +0000 (11:11 +0200)]
Restructured and renamed functions.

3 years agoMoved to new interface in sundials.
Luca Heltai [Sat, 15 May 2021 13:59:40 +0000 (15:59 +0200)]
Moved to new interface in sundials.

3 years agoMake IDA work with new sundials.
Nicola Giuliani [Thu, 13 May 2021 17:44:11 +0000 (19:44 +0200)]
Make IDA work with new sundials.

3 years agoFixed gradient of tensor product cutoff. 12227/head
Luca Heltai [Sat, 13 Feb 2021 14:46:22 +0000 (15:46 +0100)]
Fixed gradient of tensor product cutoff.

3 years agoMerge pull request #12228 from luca-heltai/quick-fix-kinsol
Peter Munch [Mon, 17 May 2021 13:18:51 +0000 (15:18 +0200)]
Merge pull request #12228 from luca-heltai/quick-fix-kinsol

Dirty fix for the tester.

3 years agoDirty fix for the tester. 12228/head
Luca Heltai [Mon, 17 May 2021 13:06:07 +0000 (15:06 +0200)]
Dirty fix for the tester.

3 years agoMerge pull request #12225 from peterrum/step62-link
Bruno Turcksin [Mon, 17 May 2021 13:04:13 +0000 (09:04 -0400)]
Merge pull request #12225 from peterrum/step62-link

Step-62: fix link

3 years agoAdd comment to find_active_cell_around_point() 12226/head
Peter Munch [Mon, 17 May 2021 11:15:56 +0000 (13:15 +0200)]
Add comment to find_active_cell_around_point()

3 years agoAccept differently partioned Triangulations in MGTwoLevelTransfer::reinit_polynomial_... 12211/head
Peter Munch [Sat, 15 May 2021 15:20:29 +0000 (17:20 +0200)]
Accept differently partioned Triangulations in MGTwoLevelTransfer::reinit_polynomial_transfer()

3 years agoMerge pull request #12220 from drwells/simplify-example-cmake
Peter Munch [Mon, 17 May 2021 10:55:16 +0000 (12:55 +0200)]
Merge pull request #12220 from drwells/simplify-example-cmake

Simplify the example CMake compilation script.

3 years agoMerge pull request #12224 from peterrum/metis_simplex
Peter Munch [Mon, 17 May 2021 10:53:42 +0000 (12:53 +0200)]
Merge pull request #12224 from peterrum/metis_simplex

Guard some simplex test with use_metis=on

3 years agoStep-62: fix link 12225/head
Peter Munch [Mon, 17 May 2021 10:50:48 +0000 (12:50 +0200)]
Step-62: fix link

3 years agoMerge pull request #11310 from dangars/find_active_cell_step62
Peter Munch [Mon, 17 May 2021 08:36:31 +0000 (10:36 +0200)]
Merge pull request #11310 from dangars/find_active_cell_step62

Use the new version of find_active_cell_around_point() in step62

3 years agoGuard some simplex test with use_metis=on 12224/head
Peter Munch [Mon, 17 May 2021 07:33:41 +0000 (09:33 +0200)]
Guard some simplex test with use_metis=on

3 years agoMerge pull request #12222 from peterrum/MGTwoLevelTransfer_dh
Martin Kronbichler [Mon, 17 May 2021 07:29:09 +0000 (09:29 +0200)]
Merge pull request #12222 from peterrum/MGTwoLevelTransfer_dh

MGTwoLevelTransfer: fix used DoFHandler

3 years agoMerge pull request #12219 from drwells/standardize-cell-measure
Bruno Turcksin [Mon, 17 May 2021 01:30:40 +0000 (21:30 -0400)]
Merge pull request #12219 from drwells/standardize-cell-measure

Remove the base-case overload of cell_measure.

3 years agoMGTwoLevelTransfer: fix used DoFHandler 12222/head
Peter Munch [Sun, 16 May 2021 21:29:00 +0000 (23:29 +0200)]
MGTwoLevelTransfer: fix used DoFHandler

3 years agoMerge pull request #12217 from jppelteret/fix_sacado_tests_01
Martin Kronbichler [Sun, 16 May 2021 20:33:28 +0000 (22:33 +0200)]
Merge pull request #12217 from jppelteret/fix_sacado_tests_01

Specify scalar operation result type

3 years agoMerge pull request #12216 from peterrum/kinsol_no_copy
Martin Kronbichler [Sun, 16 May 2021 20:31:21 +0000 (22:31 +0200)]
Merge pull request #12216 from peterrum/kinsol_no_copy

Remove copy from SUNDIALS::KINSOL

3 years agoMerge pull request #12212 from peterrum/fine_element_is_continuous
Martin Kronbichler [Sun, 16 May 2021 20:29:49 +0000 (22:29 +0200)]
Merge pull request #12212 from peterrum/fine_element_is_continuous

Add MGTwoLevelTransfer::fine_element_is_continuous and add missing compression step

3 years agoMerge pull request #12213 from peterrum/MGTwoLevelTransfer_copy
Martin Kronbichler [Sun, 16 May 2021 20:29:01 +0000 (22:29 +0200)]
Merge pull request #12213 from peterrum/MGTwoLevelTransfer_copy

MGTwoLevelTransfer: adjust criterion to skip copy

3 years agoSimplify the example CMake compilation script. 12220/head
David Wells [Sun, 16 May 2021 19:00:56 +0000 (15:00 -0400)]
Simplify the example CMake compilation script.

3 years agoSpecify scalar operation result type 12217/head
Jean-Paul Pelteret [Sun, 16 May 2021 11:37:58 +0000 (13:37 +0200)]
Specify scalar operation result type

Fixes issue with Sacado expression templates, where we do not know how to multiply a Sacado math operation result (expression template) with a Tensor or SymmetricTensor.

3 years agoMerge pull request #12218 from drwells/fix-doxygen-warnings
Jean-Paul Pelteret [Sun, 16 May 2021 17:50:08 +0000 (19:50 +0200)]
Merge pull request #12218 from drwells/fix-doxygen-warnings

Fix some simple doxygen warnings.

3 years agoRemove copy from SUNDIALS::KINSOL 12216/head
Peter Munch [Sun, 16 May 2021 09:14:16 +0000 (11:14 +0200)]
Remove copy from SUNDIALS::KINSOL

3 years agoRemove the base-case overload of cell_measure. 12219/head
David Wells [Sun, 16 May 2021 17:20:02 +0000 (13:20 -0400)]
Remove the base-case overload of cell_measure.

This isn't necessary any more since we have an ArrayView overload.

While we are at it - deprecate the array-based version of this function since it
cannot work with simplices.

3 years agoFix some simple doxygen warnings. 12218/head
David Wells [Sun, 16 May 2021 16:22:23 +0000 (12:22 -0400)]
Fix some simple doxygen warnings.


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