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https://gitweb.dealii.org/ - dealii.git/log
Denis Davydov [Fri, 24 Aug 2018 13:27:17 +0000 (15:27 +0200)]
fix uninitialized variable in FE_Enriched Helper class
David Wells [Fri, 24 Aug 2018 04:22:22 +0000 (00:22 -0400)]
Merge pull request #7108 from drwells/remove-erf-include
Remove some unused boost erf includes.
Daniel Arndt [Fri, 24 Aug 2018 00:56:09 +0000 (02:56 +0200)]
Merge pull request #7110 from bangerth/ex-10-11
Avoid loop increment operations with side effects.
Daniel Arndt [Fri, 24 Aug 2018 00:55:52 +0000 (02:55 +0200)]
Merge pull request #7112 from bangerth/avoid-assertion
Simplify two functions.
Daniel Arndt [Thu, 23 Aug 2018 22:06:36 +0000 (00:06 +0200)]
Merge pull request #7111 from drwells/remove-fe-interpolate-reference
Remove a reference to FiniteElement::interpolate().
Wolfgang Bangerth [Thu, 23 Aug 2018 21:21:33 +0000 (15:21 -0600)]
Simplify two functions.
These functions threw an exception in 1d, but this is not
the right place to check that condition: the assertion is currently
thrown because some other class does not implement a function. In
particular, this is about TriaAccessor<0,1>::operator++(), but that
already has the correct assertion that, if ever lifted, would
make the place that currently *also* checks the condition work
automatically.
David Wells [Thu, 23 Aug 2018 21:08:16 +0000 (17:08 -0400)]
Remove a reference to FiniteElement::interpolate().
This function was removed in
2fe0c3c7a7f .
Wolfgang Bangerth [Thu, 23 Aug 2018 21:06:09 +0000 (15:06 -0600)]
Avoid loop increment operations with side effects.
Just because it can be done does not mean that it *should* be done.
Daniel Arndt [Thu, 23 Aug 2018 20:31:55 +0000 (22:31 +0200)]
Merge pull request #7104 from masterleinad/const_correctness_vol
Const-correctness in lac/vector_operations_internal.h
David Wells [Thu, 23 Aug 2018 18:38:21 +0000 (14:38 -0400)]
Remove some unused boost erf includes.
David Wells [Thu, 23 Aug 2018 16:29:26 +0000 (12:29 -0400)]
Merge pull request #7106 from masterleinad/replace_math_std
Don't use math functions not preceded with std::
David Wells [Thu, 23 Aug 2018 16:29:11 +0000 (12:29 -0400)]
Merge pull request #7105 from masterleinad/deltete_wrong_configuration
Delete wrong configuration test for fe_enriched_color_07
Daniel Arndt [Thu, 23 Aug 2018 12:53:39 +0000 (14:53 +0200)]
Don't use math functions not preceded with std::
Daniel Arndt [Thu, 23 Aug 2018 12:53:28 +0000 (14:53 +0200)]
Delete wrong configuration test for fe_enriched_color_07
Daniel Arndt [Thu, 23 Aug 2018 09:32:56 +0000 (11:32 +0200)]
Const-correctness in lac/vector_operations_internal.h
Daniel Arndt [Wed, 22 Aug 2018 23:02:34 +0000 (01:02 +0200)]
Merge pull request #7067 from Rombur/new_cuda_mpi
CUDA support for LA::d:Vector
Bruno Turcksin [Wed, 22 Aug 2018 21:08:37 +0000 (17:08 -0400)]
Merge pull request #7075 from masterleinad/fix_remaining_iterative_solvers_cuda
Fix using the remaining iterative solvers with CUDAWrappers::Vector
Daniel Arndt [Fri, 17 Aug 2018 13:36:07 +0000 (15:36 +0200)]
Changelog entry
Daniel Arndt [Fri, 17 Aug 2018 13:18:23 +0000 (15:18 +0200)]
SolverFGMRES, SolverBiCGStab, SolverRichardson, SolverRelaxation
Daniel Arndt [Fri, 17 Aug 2018 13:14:25 +0000 (15:14 +0200)]
SolverQMRS
Daniel Arndt [Fri, 17 Aug 2018 13:13:36 +0000 (15:13 +0200)]
SolverMinRes
Daniel Arndt [Fri, 17 Aug 2018 13:12:25 +0000 (15:12 +0200)]
SolverFIRE
Daniel Arndt [Fri, 17 Aug 2018 13:11:31 +0000 (15:11 +0200)]
Implement CUDAWrappers::Vector::norm_sqr
Bruno Turcksin [Wed, 1 Aug 2018 15:33:59 +0000 (15:33 +0000)]
Add changelog entry
Bruno Turcksin [Thu, 2 Aug 2018 14:51:35 +0000 (14:51 +0000)]
Add tests
Bruno Turcksin [Thu, 2 Aug 2018 14:51:24 +0000 (14:51 +0000)]
Add support for CUDA memory space in LA::distributed::Vector
Add support for CUDA memory space to LinearAlgebra::distributed::Vector by
adding a new template parameter with a default value of Host.
Daniel Arndt [Wed, 22 Aug 2018 11:54:54 +0000 (13:54 +0200)]
Merge pull request #7089 from drwells/add-Table-iterators
Add table iterators
David Wells [Mon, 20 Aug 2018 04:22:11 +0000 (00:22 -0400)]
Add matrix iterators to Table (and FullMatrix).
This generalizes the work done in
b4b71dc9f60 by adding more template parameters
to the iterator and accessor classes for TransposeTable: the new version is now
used in Table (and thus FullMatrix).
The old FullMatrix::const_iterator has been completely removed (since the new
version provides both const and non-const iterators).
David Wells [Wed, 22 Aug 2018 01:05:51 +0000 (21:05 -0400)]
Merge pull request #7097 from bangerth/conditional
Use std::conditional instead of a switch class.
Wolfgang Bangerth [Tue, 21 Aug 2018 21:55:04 +0000 (15:55 -0600)]
Use std::conditional instead of a switch class.
Daniel Arndt [Tue, 21 Aug 2018 21:13:47 +0000 (23:13 +0200)]
Merge pull request #7094 from masterleinad/cudawrappers_sparse_matrix_unique
Use unique_ptr in CUDAWrappers::SparseMatrix
Daniel Arndt [Tue, 21 Aug 2018 21:12:52 +0000 (23:12 +0200)]
Merge pull request #7096 from davydden/feature/asserts_mpi_partitioner
add asserts and comments in MPI::Partitioner
Denis Davydov [Tue, 21 Aug 2018 16:31:18 +0000 (18:31 +0200)]
simplify the zero fix
Denis Davydov [Tue, 21 Aug 2018 16:28:34 +0000 (18:28 +0200)]
add a note why we have zeros in first_index
Denis Davydov [Tue, 21 Aug 2018 15:35:49 +0000 (17:35 +0200)]
add asserts and comments in MPI::Partitioner
Wolfgang Bangerth [Tue, 21 Aug 2018 15:50:55 +0000 (09:50 -0600)]
Merge pull request #7081 from drwells/affineconstraints-modernization
AffineConstraints modernization
Wolfgang Bangerth [Tue, 21 Aug 2018 15:45:25 +0000 (09:45 -0600)]
Merge pull request #7090 from AlexanderBlank/add_parameter_handler_get_with_path
ParameterHandler get from subsection
Denis Davydov [Tue, 21 Aug 2018 14:59:08 +0000 (16:59 +0200)]
Merge pull request #7087 from bangerth/doc-update
Add some discussion about extractors.
Wolfgang Bangerth [Mon, 20 Aug 2018 17:41:25 +0000 (11:41 -0600)]
Add some discussion about extractors.
Daniel Arndt [Tue, 21 Aug 2018 14:51:51 +0000 (16:51 +0200)]
Rename functions allocating and deleting
Wolfgang Bangerth [Tue, 21 Aug 2018 14:46:42 +0000 (08:46 -0600)]
Merge pull request #7042 from masterleinad/serial_periodic_refinement
Consider periodic neighbors during grid refinement in serial
Daniel Arndt [Tue, 21 Aug 2018 07:26:43 +0000 (09:26 +0200)]
Use unique_ptr in CUDAWrappers::SparseMatrix
Bruno Turcksin [Tue, 21 Aug 2018 13:09:18 +0000 (09:09 -0400)]
Merge pull request #7082 from masterleinad/improve_cudawrappers_smartmatrix
Some improvements for CUDAWrappers::SparseMatrix
Daniel Arndt [Tue, 21 Aug 2018 08:35:55 +0000 (10:35 +0200)]
Simplify some logic in Triangulation::prepare_coarsening_and_refinement
AlexanderBlank [Tue, 21 Aug 2018 05:54:59 +0000 (22:54 -0700)]
Added overloads for ParameterHandler getters to accept a subsection path so that data from a subsection below the current one can be retrieved while keeping the ParameterHandler const. Also added tests and documentation of this feature., minor text changes.
Wolfgang Bangerth [Mon, 20 Aug 2018 23:45:16 +0000 (17:45 -0600)]
Merge pull request #7072 from masterleinad/fix_cuda_wrappers_copy_assignment
Fix CUDAWrappers::Vector copy assignment
David Wells [Mon, 20 Aug 2018 23:19:49 +0000 (19:19 -0400)]
Use line_n for line number in AffineConstraints.
'line' is presently used for both ConstraintLine objects and the index
of ConstraintLine objects: this commit makes things clearer by always
refering to the index as 'line_n'.
David Wells [Sat, 18 Aug 2018 23:39:11 +0000 (19:39 -0400)]
Convert an internal function into a lambda.
Martin Kronbichler [Mon, 20 Aug 2018 19:30:02 +0000 (21:30 +0200)]
Merge pull request #6863 from drwells/add-cylinder-grid
Add a grid for the flow past a cylinder benchmark.
Martin Kronbichler [Mon, 20 Aug 2018 19:28:57 +0000 (21:28 +0200)]
Merge pull request #7086 from masterleinad/replace_fixed_int_power
Replace Utilities::fixed_int_power by Utilities::pow
Daniel Arndt [Mon, 20 Aug 2018 16:33:50 +0000 (18:33 +0200)]
Add tests
Wolfgang Bangerth [Mon, 20 Aug 2018 17:30:24 +0000 (11:30 -0600)]
Update a comment about which FEValues extractors are available.
Daniel Arndt [Sun, 19 Aug 2018 22:48:06 +0000 (00:48 +0200)]
Changelog entry
Daniel Arndt [Sat, 18 Aug 2018 23:47:38 +0000 (01:47 +0200)]
Add a move assignment operator for CUDAWrappers::SparseMatrix
Daniel Arndt [Fri, 17 Aug 2018 23:56:49 +0000 (01:56 +0200)]
Implement CUDAWrappers::SparseMatrix::print*
Daniel Arndt [Mon, 20 Aug 2018 16:21:38 +0000 (18:21 +0200)]
Merge pull request #7083 from masterleinad/cuda_assert_nothrow
AssertNothrowCUDA and AssertNothrowCusparse
Daniel Arndt [Mon, 20 Aug 2018 13:50:10 +0000 (15:50 +0200)]
Replace Utilities::fixed_int_power by Utilities::pow
Bruno Turcksin [Mon, 20 Aug 2018 13:10:09 +0000 (09:10 -0400)]
Merge pull request #7085 from kronbichler/avoid_deprecated_pow
Avoid deprecated fixed_int_power
Martin Kronbichler [Mon, 20 Aug 2018 10:51:46 +0000 (12:51 +0200)]
Avoid deprecated fixed_int_power
Daniel Arndt [Mon, 20 Aug 2018 08:37:08 +0000 (10:37 +0200)]
Merge pull request #7078 from drwells/fix-sign-warnings
Fix some sign comparison warnings.
Martin Kronbichler [Mon, 20 Aug 2018 07:09:58 +0000 (09:09 +0200)]
Merge pull request #7032 from kronbichler/matrix_free_interleaved_dof_storage
Add interleaved dof storage for DG to MatrixFree
David Wells [Mon, 20 Aug 2018 04:19:30 +0000 (00:19 -0400)]
Remove extra table.h inclusions.
Daniel Arndt [Sun, 19 Aug 2018 22:57:21 +0000 (00:57 +0200)]
Changelog entry
Daniel Arndt [Sat, 18 Aug 2018 21:35:34 +0000 (23:35 +0200)]
Use AssertNothrowCuda
Daniel Arndt [Sat, 18 Aug 2018 21:29:40 +0000 (23:29 +0200)]
Add Nothrow variants to CUDA and CUSPARSE assert
Daniel Arndt [Sat, 18 Aug 2018 21:34:34 +0000 (23:34 +0200)]
Change CUDAWrappers::size_type to int
Jean-Paul Pelteret [Sun, 19 Aug 2018 14:30:18 +0000 (16:30 +0200)]
Merge pull request #7079 from drwells/duplicated-branch-warnings
Fix some duplicated branch warnings.
Martin Kronbichler [Sun, 19 Aug 2018 08:07:32 +0000 (10:07 +0200)]
Merge pull request #7080 from drwells/mapping-manifold-initlog
Ensure initlog() is used in tests/manifold and tests/mappings.
David Wells [Sat, 18 Aug 2018 23:37:37 +0000 (19:37 -0400)]
Convert some loops in AffineConstraints to range-for loops.
David Wells [Sat, 18 Aug 2018 19:13:16 +0000 (15:13 -0400)]
Use references instead of pointers.
There is no null pointer check later on, so its a bit cleaner to just check
indices and then get a reference.
David Wells [Sat, 18 Aug 2018 16:37:30 +0000 (12:37 -0400)]
Ensure initlog() is used in tests/manifold and tests/mappings.
David Wells [Sat, 18 Aug 2018 18:52:04 +0000 (14:52 -0400)]
Fix some duplicated branch warnings.
David Wells [Sat, 18 Aug 2018 23:39:35 +0000 (19:39 -0400)]
Fix some sign comparison warnings.
Daniel Arndt [Sat, 18 Aug 2018 21:37:32 +0000 (23:37 +0200)]
Use Utilities::CUDA functions and use variable names consistently
Martin Kronbichler [Sat, 18 Aug 2018 17:18:55 +0000 (19:18 +0200)]
Add documentation.
David Wells [Fri, 17 Aug 2018 23:42:27 +0000 (19:42 -0400)]
Merge pull request #7063 from masterleinad/avoid_exception_slicing
Avoid slicing when throwing in Assert
David Wells [Fri, 17 Aug 2018 23:39:57 +0000 (19:39 -0400)]
Merge pull request #7076 from bangerth/glossary
Reference the 'coarse mesh' glossary entry.
David Wells [Fri, 17 Aug 2018 23:19:38 +0000 (19:19 -0400)]
Merge pull request #7073 from bangerth/trilinos
Fix links to the trilinos website.
Wolfgang Bangerth [Fri, 17 Aug 2018 22:45:17 +0000 (16:45 -0600)]
Reference the 'coarse mesh' glossary entry.
Wolfgang Bangerth [Fri, 17 Aug 2018 22:37:25 +0000 (16:37 -0600)]
Fix links to pages that no longer exist.
Also use valid HTML.
Bruno Turcksin [Wed, 15 Aug 2018 15:07:52 +0000 (15:07 +0000)]
Consistently use const std::shared_ptr & for the import functions
Daniel Arndt [Fri, 17 Aug 2018 09:34:42 +0000 (11:34 +0200)]
Move global deal_II_exceptions variables into the internals namespace
David Wells [Fri, 17 Aug 2018 03:18:17 +0000 (23:18 -0400)]
Merge pull request #7070 from bangerth/muparser
Document a problem with the FunctionParser class.
David Wells [Fri, 17 Aug 2018 03:18:02 +0000 (23:18 -0400)]
Merge pull request #7062 from bangerth/glossary
Add a glossary entry for the term 'coarse mesh'.
Wolfgang Bangerth [Fri, 17 Aug 2018 02:44:47 +0000 (20:44 -0600)]
Fix links to the trilinos website.
Wolfgang Bangerth [Tue, 14 Aug 2018 19:21:28 +0000 (13:21 -0600)]
Add a glossary entry for the term 'coarse mesh'.
Daniel Arndt [Thu, 16 Aug 2018 23:43:31 +0000 (01:43 +0200)]
Merge pull request #7068 from masterleinad/introduce_compiler_cuda_aware
Fix CUDAWrappers group documentation
Daniel Arndt [Thu, 16 Aug 2018 23:42:49 +0000 (01:42 +0200)]
Merge pull request #7061 from marcfehling/vardata-soltrans
Enable 'hp::DofHandler' for 'p::d::SolutionTransfer'.
Daniel Arndt [Thu, 16 Aug 2018 23:32:21 +0000 (01:32 +0200)]
Make some cudaError_t variables const
Wolfgang Bangerth [Thu, 16 Aug 2018 21:22:36 +0000 (15:22 -0600)]
Merge pull request #6984 from davydden/feature/storage
add a FiniteSizeHistory class to store objects
Daniel Arndt [Thu, 16 Aug 2018 21:10:01 +0000 (23:10 +0200)]
Changelog entry
Daniel Arndt [Thu, 16 Aug 2018 21:07:04 +0000 (23:07 +0200)]
Add GMRES test for CUDAWrappers::Vector
Daniel Arndt [Thu, 16 Aug 2018 21:06:06 +0000 (23:06 +0200)]
Use unique_ptr for storing the pointer to device memory
Daniel Arndt [Thu, 16 Aug 2018 21:04:34 +0000 (23:04 +0200)]
Add test for CUDAWrappers::Vector::print
Wolfgang Bangerth [Thu, 16 Aug 2018 17:32:53 +0000 (11:32 -0600)]
Document a problem with the FunctionParser class.
Marc Fehling [Thu, 19 Jul 2018 20:22:40 +0000 (14:22 -0600)]
Enable 'hp::DofHandler' for 'p::d::SolutionTransfer'.
Daniel Arndt [Thu, 16 Aug 2018 15:43:26 +0000 (17:43 +0200)]
Merge pull request #7069 from masterleinad/fix_cuda_wrapper_vector_print
Fix wrong symbol in CUDAWrappers::Vector::print()
Daniel Arndt [Thu, 16 Aug 2018 14:17:16 +0000 (16:17 +0200)]
Fix wrong symbol in CUDAWrappers::Vector::print()
Daniel Arndt [Thu, 16 Aug 2018 12:44:08 +0000 (14:44 +0200)]
Add more function and classes to the CUDAWrappers group
Daniel Arndt [Thu, 16 Aug 2018 12:43:28 +0000 (14:43 +0200)]
Mark functions usable in CUDA kernels differently
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