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https://gitweb.dealii.org/ - dealii.git/log
Jean-Paul Pelteret [Fri, 2 Feb 2018 06:14:16 +0000 (07:14 +0100)]
Facilitate casting between tensors of AD numbers to floats.
Jean-Paul Pelteret [Fri, 2 Feb 2018 05:51:04 +0000 (06:51 +0100)]
Add operator assigning a scalar to a Tensor<0>.
Wolfgang Bangerth [Fri, 2 Feb 2018 03:04:59 +0000 (20:04 -0700)]
Merge pull request #5781 from BenBrands/scalapack
ScaLAPACKMatrix: add routines to save/load matrix to/from disc
Denis Davydov [Thu, 1 Feb 2018 20:10:52 +0000 (21:10 +0100)]
Merge pull request #5841 from jppelteret/fix_5840
Remove a typedef thats unused when compiling in release mode.
Jean-Paul Pelteret [Thu, 1 Feb 2018 18:03:14 +0000 (19:03 +0100)]
Remove a typedef thats unused when compiling in release mode.
Fixes 5840.
Denis Davydov [Thu, 1 Feb 2018 16:44:25 +0000 (17:44 +0100)]
Merge pull request #5827 from bangerth/sort-code-gallery
Sort entries to the code gallery by their name, not their directory name.
Denis Davydov [Thu, 1 Feb 2018 16:21:19 +0000 (17:21 +0100)]
Merge pull request #5837 from QiaoLei-88/fix_icc15_compile
make icc 15 compiles on CentOS 7
Denis Davydov [Thu, 1 Feb 2018 13:49:07 +0000 (14:49 +0100)]
Merge pull request #5836 from bangerth/fix-wording
Use less obscure wording.
Wolfgang Bangerth [Thu, 1 Feb 2018 03:38:09 +0000 (20:38 -0700)]
Use less obscure wording.
David Wells [Thu, 1 Feb 2018 12:59:53 +0000 (07:59 -0500)]
Merge pull request #5838 from kronbichler/mf_dg_step1
Add macro for __restrict keyword.
Martin Kronbichler [Thu, 1 Feb 2018 10:23:01 +0000 (11:23 +0100)]
Add macro for __restrict keyword.
Denis Davydov [Thu, 1 Feb 2018 05:37:59 +0000 (06:37 +0100)]
Merge pull request #5831 from masterleinad/fix_periodicity_01
Fix mpi/periodicity_01
Wolfgang Bangerth [Thu, 1 Feb 2018 03:16:16 +0000 (20:16 -0700)]
Merge pull request #5835 from Rombur/trilinos_documentation
Remove reference to a function that does not exist
Lei Qiao [Thu, 1 Feb 2018 01:49:55 +0000 (09:49 +0800)]
satisfy icc 15 about template arguments of std::map's
Bruno Turcksin [Thu, 1 Feb 2018 02:55:55 +0000 (21:55 -0500)]
Remove reference to a function that does not exist
David Wells [Thu, 1 Feb 2018 02:04:36 +0000 (21:04 -0500)]
Merge pull request #5833 from masterleinad/fix_enriched_ice
Fix ICC-16 ICE in fe_enriched.h
Daniel Arndt [Wed, 31 Jan 2018 18:37:29 +0000 (19:37 +0100)]
Workaround ICC compiler bug
David Wells [Wed, 31 Jan 2018 15:55:29 +0000 (10:55 -0500)]
Merge pull request #5832 from masterleinad/fix_typo_finitelement
Fix typo FinitElement
Daniel Arndt [Wed, 31 Jan 2018 15:41:56 +0000 (16:41 +0100)]
Fix typo FinitElement
Bruno Turcksin [Wed, 31 Jan 2018 13:23:54 +0000 (08:23 -0500)]
Merge pull request #5826 from Rombur/cusparse_assert
Cusparse assert
Martin Kronbichler [Wed, 31 Jan 2018 10:25:11 +0000 (11:25 +0100)]
Merge pull request #5714 from masterleinad/replace_hypersphere
Replace HyperShellBoundary by SphericalManifold in tests
Bruno Turcksin [Mon, 29 Jan 2018 15:49:53 +0000 (10:49 -0500)]
Add changelog entry
Bruno Turcksin [Mon, 29 Jan 2018 15:44:59 +0000 (10:44 -0500)]
Add AssertCusparse macro to check that a cuSPARSE routine was successful
Daniel Arndt [Tue, 30 Jan 2018 22:12:28 +0000 (23:12 +0100)]
Improve documentation
Daniel Arndt [Wed, 10 Jan 2018 09:13:59 +0000 (10:13 +0100)]
Clean up
Daniel Arndt [Wed, 3 Jan 2018 12:04:55 +0000 (13:04 +0100)]
Replace HyperShellBoundary by SphericalManifold in tests
Daniel Arndt [Tue, 30 Jan 2018 21:43:10 +0000 (22:43 +0100)]
Fix else branch in SphericalManifold::normals_at_vertices
Daniel Arndt [Tue, 30 Jan 2018 15:23:12 +0000 (16:23 +0100)]
Fix mpi/periodicity_01
Daniel Arndt [Tue, 30 Jan 2018 13:11:26 +0000 (14:11 +0100)]
Merge pull request #5830 from kronbichler/fix_mg_transfer_mf
Fix matrix-free transfer for multi-components FE and p>10
Martin Kronbichler [Tue, 30 Jan 2018 10:21:34 +0000 (11:21 +0100)]
Add changelog.
Martin Kronbichler [Tue, 30 Jan 2018 10:19:01 +0000 (11:19 +0100)]
Add test.
Martin Kronbichler [Tue, 30 Jan 2018 10:18:50 +0000 (11:18 +0100)]
Fix transfer for high polynomial degrees.
Martin Kronbichler [Tue, 30 Jan 2018 08:13:42 +0000 (09:13 +0100)]
Merge pull request #5819 from drwells/project-to-object-tol
Improve tolerances for errors near zero.
Martin Kronbichler [Tue, 30 Jan 2018 08:11:43 +0000 (09:11 +0100)]
Merge pull request #5711 from masterleinad/simplify_normal_spherical
Simplify implementation for normal_vector and get_normals_at_vertices in SphericalManifold
Wolfgang Bangerth [Mon, 29 Jan 2018 22:13:20 +0000 (15:13 -0700)]
Sort entries to the code gallery by their name, not their directory name.
Benjamin Brands [Mon, 29 Jan 2018 20:17:46 +0000 (21:17 +0100)]
separated tests for copying sub-matrices
Wolfgang Bangerth [Mon, 29 Jan 2018 17:48:55 +0000 (10:48 -0700)]
Merge pull request #5825 from Rombur/fix_cuda
Fix a bug in a CUDA vector constructor
Daniel Arndt [Wed, 10 Jan 2018 00:05:34 +0000 (01:05 +0100)]
Simplify implementation for normal_vector and get_normals_at_vertices in SphericalManifold
Benjamin Brands [Wed, 24 Jan 2018 08:14:49 +0000 (09:14 +0100)]
corrections_I
Benjamin Brands [Tue, 23 Jan 2018 09:37:01 +0000 (10:37 +0100)]
improve documentation and minor clean-ups
Benjamin Brands [Tue, 23 Jan 2018 09:18:49 +0000 (10:18 +0100)]
add routine copy_to to copy content of a submatrix of A to a submatrix of B
Benjamin Brands [Tue, 23 Jan 2018 09:14:57 +0000 (10:14 +0100)]
add tests for save/load of ScaLapackMatrix
Benjamin Brands [Tue, 23 Jan 2018 09:11:27 +0000 (10:11 +0100)]
add routines to save/load ScaLAPACK matrices using HDF5
Benjamin Brands [Tue, 23 Jan 2018 08:47:26 +0000 (09:47 +0100)]
add hdf5_type_id to return HDF5 type
Denis Davydov [Mon, 29 Jan 2018 10:05:06 +0000 (11:05 +0100)]
Merge pull request #5823 from BenBrands/move_some_to_some
move implementation of Utilities::MPI::some_to_some()
Bruno Turcksin [Mon, 29 Jan 2018 00:33:31 +0000 (19:33 -0500)]
Fix a bug in a CUDA vector constructor
The constructor did not set the values in the vector to zero
David Wells [Sun, 28 Jan 2018 21:59:02 +0000 (16:59 -0500)]
Merge pull request #5824 from masterleinad/rm_sd_ids_p_08
Remove subdomain_ids_parallel_08
Daniel Arndt [Sun, 28 Jan 2018 20:00:23 +0000 (21:00 +0100)]
Merge pull request #5779 from masterleinad/fix_periodic_dofs
Fix periodicity constraints for multiply constrained DoFs
Timo Heister [Sun, 28 Jan 2018 18:41:56 +0000 (13:41 -0500)]
Merge pull request #5811 from bangerth/unpack-for-arrays
Add a variant of Utilities::unpack() for arrays.
Daniel Arndt [Sun, 28 Jan 2018 18:21:47 +0000 (19:21 +0100)]
Remove subdomain_ids_parallel_08
benjamin [Sun, 28 Jan 2018 10:38:09 +0000 (11:38 +0100)]
move implemetation of MPI::some_to_some
Denis Davydov [Sun, 28 Jan 2018 07:22:15 +0000 (08:22 +0100)]
Merge pull request #5822 from bangerth/copyright
Update copyright years.
Denis Davydov [Sun, 28 Jan 2018 07:21:25 +0000 (08:21 +0100)]
Merge pull request #5820 from BenBrands/move_all_gather
Move implementation of MPI::all_gather()
Wolfgang Bangerth [Sun, 28 Jan 2018 03:01:01 +0000 (20:01 -0700)]
Update copyright years.
Wolfgang Bangerth [Sun, 28 Jan 2018 02:17:16 +0000 (19:17 -0700)]
Merge pull request #5817 from drwells/cppcheck-4
Fix some things cppcheck found.
Wolfgang Bangerth [Sun, 28 Jan 2018 02:14:19 +0000 (19:14 -0700)]
Merge pull request #5821 from masterleinad/fix_utilities_pack_unpack_03
Fix utilities_pack_unpack_03
Daniel Arndt [Sat, 27 Jan 2018 23:51:39 +0000 (00:51 +0100)]
Merge pull request #5809 from bangerth/pointers
Specialize ArrayViewHelper::is_contiguous() for pointers.
Daniel Arndt [Sat, 27 Jan 2018 23:27:20 +0000 (00:27 +0100)]
Fix utilities_pack_unpack_03
David Wells [Sat, 27 Jan 2018 18:19:53 +0000 (13:19 -0500)]
Use nullptr for the null pointer.
David Wells [Sat, 27 Jan 2018 18:25:16 +0000 (13:25 -0500)]
Use constant references instead of copies.
This was found by cppcheck.
David Wells [Sat, 27 Jan 2018 18:24:47 +0000 (13:24 -0500)]
Reduce the scope of some variables.
This was found by cppcheck.
David Wells [Sat, 27 Jan 2018 18:23:39 +0000 (13:23 -0500)]
Fix initialization of protected/private solver members.
This was found by cppcheck.
benjamin [Sat, 27 Jan 2018 21:25:55 +0000 (22:25 +0100)]
Move implementation of MPI::all_gather()
David Wells [Sat, 27 Jan 2018 20:39:32 +0000 (15:39 -0500)]
Improve tolerances for errors near zero.
Details in the floating point implementation (e.g., whether or not -ffast-math
is used) can change the error by an order of magnitude or more. Get around this
by, in each relevant case, bounding the error above.
Since the errors are now checked in a different way the alternative output file
has been removed.
Wolfgang Bangerth [Sat, 27 Jan 2018 19:56:58 +0000 (12:56 -0700)]
Merge pull request #5816 from jppelteret/fix_5763
Ensure parallel::Tria can't be used with DoFRenumbering::subdomain_wise
Wolfgang Bangerth [Sat, 27 Jan 2018 19:51:31 +0000 (12:51 -0700)]
Merge pull request #5784 from BenBrands/utilities_mpi_gather
Add Utilities::MPI::gather
David Wells [Sat, 27 Jan 2018 18:23:12 +0000 (13:23 -0500)]
Initialize some variables.
This was found by cppcheck.
David Wells [Sat, 27 Jan 2018 18:18:54 +0000 (13:18 -0500)]
Use default copy constructors.
This was found by cppcheck.
Wolfgang Bangerth [Sat, 27 Jan 2018 01:17:32 +0000 (18:17 -0700)]
Add test.
David Wells [Sat, 27 Jan 2018 14:57:06 +0000 (09:57 -0500)]
Merge pull request #5814 from drwells/fix-doc-typos-8
Fix some typos in the documentation.
Jean-Paul Pelteret [Sat, 27 Jan 2018 09:37:20 +0000 (10:37 +0100)]
Ensure parallel::Tria can't be used with DoFRenumbering::subdomain_wise
The documentation is also updated to reflect this point. Fixes 5763.
David Wells [Sat, 27 Jan 2018 02:26:36 +0000 (21:26 -0500)]
Fix some typos in the documentation.
Jean-Paul Pelteret [Sat, 27 Jan 2018 09:06:17 +0000 (10:06 +0100)]
Merge pull request #5815 from drwells/remove-c++03-references
Remove some references to older C++ versions.
David Wells [Sat, 27 Jan 2018 02:41:35 +0000 (21:41 -0500)]
Remove some references to older C++ versions.
We now require C++11 so these statements are not correct.
Wolfgang Bangerth [Sat, 27 Jan 2018 01:18:43 +0000 (18:18 -0700)]
Merge pull request #5813 from masterleinad/alternative_output_cafi01b
Add alternative output for communicate_active_fe_indices_01b
Wolfgang Bangerth [Fri, 26 Jan 2018 15:51:55 +0000 (08:51 -0700)]
Specialize ArrayViewHelper::is_contiguous() for pointers.
Wolfgang Bangerth [Sat, 27 Jan 2018 01:15:05 +0000 (18:15 -0700)]
Merge pull request #5812 from masterleinad/unused_metis
More unused parameters without METIS
Daniel Arndt [Sat, 27 Jan 2018 01:06:51 +0000 (02:06 +0100)]
Add alternative output for communicate_active_fe_indices_01b
Daniel Arndt [Sat, 27 Jan 2018 01:09:32 +0000 (02:09 +0100)]
More unused parameters without METIS
Daniel Arndt [Sat, 27 Jan 2018 00:53:28 +0000 (01:53 +0100)]
Merge pull request #5810 from bangerth/add-test-pack
Add a test for the fast-path pack()/unpack() functions.
Wolfgang Bangerth [Fri, 26 Jan 2018 18:31:27 +0000 (11:31 -0700)]
Add a test.
Wolfgang Bangerth [Fri, 26 Jan 2018 18:31:26 +0000 (11:31 -0700)]
Add a variant of Utilities::unpack() for arrays.
Timo Heister [Fri, 26 Jan 2018 17:49:38 +0000 (12:49 -0500)]
Merge pull request #5804 from bangerth/hyper-sphere
Restrict the template arguments of GridGenerator::hyper_sphere.
Wolfgang Bangerth [Fri, 26 Jan 2018 17:40:08 +0000 (10:40 -0700)]
Add a test for the fast-path pack()/unpack() functions.
Daniel Arndt [Fri, 26 Jan 2018 17:29:37 +0000 (18:29 +0100)]
Merge pull request #5808 from bangerth/fix-warnings
Disable warnings in zoltan_cpp.h.
Wolfgang Bangerth [Fri, 26 Jan 2018 15:15:37 +0000 (08:15 -0700)]
Disable warnings in zoltan_cpp.h.
Without this, we get warnings of the kind
/home/bangerth/bin/trilinos-12.8.1-mpi/include/zoltan_cpp.h:181:24: warning: unused parameter ‘iperm’ [-Wunused-parameter]
int * iperm )
^~~~~
We already do a similar thing in sparsity_tools.cc, the only other places
where we include zoltan_cpp.h.
Jean-Paul Pelteret [Fri, 26 Jan 2018 14:22:38 +0000 (15:22 +0100)]
Merge pull request #5806 from jppelteret/comment_5788
Amend comment related to making a local copy of Trilinos MPI vector.
Jean-Paul Pelteret [Fri, 26 Jan 2018 07:29:28 +0000 (08:29 +0100)]
Amend comment related to making a local copy of Trilinos MPI vector.
Denis Davydov [Fri, 26 Jan 2018 11:51:19 +0000 (12:51 +0100)]
Merge pull request #5807 from masterleinad/lapack_unused_parameters
Unused parameters without LAPACK
Daniel Arndt [Fri, 26 Jan 2018 09:27:53 +0000 (10:27 +0100)]
Unused parameters without LAPACK
Denis Davydov [Fri, 26 Jan 2018 07:36:13 +0000 (08:36 +0100)]
Merge pull request #5801 from masterleinad/tensor_iterators
Tensor iterators
Denis Davydov [Fri, 26 Jan 2018 07:35:59 +0000 (08:35 +0100)]
Merge pull request #5803 from masterleinad/scalapack_assert
Fix structure of Assert in scalapack.cc
Daniel Arndt [Thu, 25 Jan 2018 09:08:28 +0000 (10:08 +0100)]
Simplify Utilities::MPI::sum for *Tensor
Daniel Arndt [Thu, 25 Jan 2018 09:13:07 +0000 (10:13 +0100)]
Introduce begin/end_raw and switch element access to const&
Daniel Arndt [Thu, 25 Jan 2018 09:05:29 +0000 (10:05 +0100)]
Reorder array_view.h and make_array_view for Tensor classes
Benjamin Brands [Tue, 23 Jan 2018 08:47:26 +0000 (09:47 +0100)]
add gather to Utilities::MPI
index_set: replace MPI_Gather by Utilities::MPI::gather
Wolfgang Bangerth [Thu, 25 Jan 2018 21:20:03 +0000 (14:20 -0700)]
Add changelog.
Wolfgang Bangerth [Thu, 25 Jan 2018 20:57:40 +0000 (13:57 -0700)]
Merge pull request #5790 from masterleinad/check_contiguity
Check contiguity of iterators in make_array_view
Wolfgang Bangerth [Thu, 25 Jan 2018 17:45:45 +0000 (10:45 -0700)]
Restrict the template arguments of GridGenerator::hyper_sphere.
This function can only work for dim==spacedim-1, and this is also documented.
Consequently, get rid of the dim template argument.
Timo Heister [Thu, 25 Jan 2018 16:14:05 +0000 (11:14 -0500)]
Merge pull request #5802 from masterleinad/fix_more_unused
Fix more unused variables
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