Figure out where data_out was breaking... move @whattodo to data_out_dof_data.

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31087 0785d39b-7218-0410-832d-ea1e28bc413d

A rather long but sensible error message in slepc solver in case of complex type (advanced API useage).

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31086 0785d39b-7218-0410-832d-ea1e28bc413d

One more error identify - only dat out is masked now...

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31085 0785d39b-7218-0410-832d-ea1e28bc413d

By-pass a load of errors until we figure out how to deal with them - grep @whattodo.

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31083 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from trunk to branch; mask data_out_dof_data.

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31040 0785d39b-7218-0410-832d-ea1e28bc413d

tenporary fix for matrix.

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@31035 0785d39b-7218-0410-832d-ea1e28bc413d

One happy fix in matrix_tools.

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@29802 0785d39b-7218-0410-832d-ea1e28bc413d

merge 64-bit int from mainline

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@29779 0785d39b-7218-0410-832d-ea1e28bc413d

fix one test output from branch

git-svn-id: https://svn.dealii.org/trunk@29771 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Actually use PORD_LIBERARY in FindMUMPS.cmake, next try to fix issue 60...

git-svn-id: https://svn.dealii.org/trunk@29769 0785d39b-7218-0410-832d-ea1e28bc413d

make tester happy

git-svn-id: https://svn.dealii.org/trunk@29760 0785d39b-7218-0410-832d-ea1e28bc413d

Output files for two tests are different for 32bit and 64bit. Put 32bit version of the files back into mainline.

git-svn-id: https://svn.dealii.org/trunk@29759 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a compilation regression

git-svn-id: https://svn.dealii.org/trunk@29758 0785d39b-7218-0410-832d-ea1e28bc413d

Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@29757 0785d39b-7218-0410-832d-ea1e28bc413d

Update config.h.in

git-svn-id: https://svn.dealii.org/trunk@29756 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Some small changes for DEAL_II_WITH_64BIT_INDICES

 - Bugfix: Prevent DEAL_II_FORCE_AUTODETECTION from unsetting
   DEAL_II_WITH_64BIT_INDICES

 - Also document DEAL_II_WITH_64BIT_INDICES in
   doc/development/Config.sample

 - Do not mark DEAL_II_WITH_64BIT_INDICES as advanced as it already shows
   up in the summary and detailes logs.

git-svn-id: https://svn.dealii.org/trunk@29755 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Small cleanup: Use OPTION(...) instead of SET(BOOL ...)

git-svn-id: https://svn.dealii.org/trunk@29754 0785d39b-7218-0410-832d-ea1e28bc413d

Merge branch_bigger_global_dof_indices_4 back into mainline.

git-svn-id: https://svn.dealii.org/trunk@29753 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Fix Typo in FindMUMPS.cmake, fix issue 60

git-svn-id: https://svn.dealii.org/trunk@29752 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29751 0785d39b-7218-0410-832d-ea1e28bc413d

Use typedef instead of #if #else.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29750 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a bug when using 32bits global indices.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29749 0785d39b-7218-0410-832d-ea1e28bc413d

Temporarily mask instantiation. Work on matrix_tools and vector_tools

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@29748 0785d39b-7218-0410-832d-ea1e28bc413d

Make branch in which to develop PetscScalar complex

git-svn-id: https://svn.dealii.org/branches/branch_petscscalar_complex@29747 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust formula.

git-svn-id: https://svn.dealii.org/trunk@29746 0785d39b-7218-0410-832d-ea1e28bc413d

Increase size of stabilization parameter to get stable solutions at large times.

git-svn-id: https://svn.dealii.org/trunk@29745 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a bug in sparse_matrix.template.h

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29744 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a bug in distribute_mg_dofs.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29743 0785d39b-7218-0410-832d-ea1e28bc413d

Fix location of a semicolon so that it doesn't trip up the compiler.

git-svn-id: https://svn.dealii.org/trunk@29742 0785d39b-7218-0410-832d-ea1e28bc413d

Scott Miller's patch adding the unique_faces option

git-svn-id: https://svn.dealii.org/trunk@29741 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29740 0785d39b-7218-0410-832d-ea1e28bc413d

Syntax tweak

git-svn-id: https://svn.dealii.org/trunk@29739 0785d39b-7218-0410-832d-ea1e28bc413d

Deal kindly with PETSC_USE_COMPLEX in SLEPcWrappers.

git-svn-id: https://svn.dealii.org/trunk@29738 0785d39b-7218-0410-832d-ea1e28bc413d

Deal kindly with PETSC_USE_COMPLEX in PETScWrappers.

git-svn-id: https://svn.dealii.org/trunk@29737 0785d39b-7218-0410-832d-ea1e28bc413d

Deal with PETSC_USE_COMPLEX in PETScWrappers.

git-svn-id: https://svn.dealii.org/trunk@29736 0785d39b-7218-0410-832d-ea1e28bc413d

Fix previous change.

git-svn-id: https://svn.dealii.org/trunk@29735 0785d39b-7218-0410-832d-ea1e28bc413d

Catch exceptions also in WorkStream, similar to the recent change to tasks.

git-svn-id: https://svn.dealii.org/trunk@29734 0785d39b-7218-0410-832d-ea1e28bc413d

update test

git-svn-id: https://svn.dealii.org/trunk@29732 0785d39b-7218-0410-832d-ea1e28bc413d

step-50: clean up, comparison with AMG

git-svn-id: https://svn.dealii.org/trunk@29731 0785d39b-7218-0410-832d-ea1e28bc413d

work on fixing multigrid in parallel

git-svn-id: https://svn.dealii.org/trunk@29730 0785d39b-7218-0410-832d-ea1e28bc413d

update test

git-svn-id: https://svn.dealii.org/trunk@29729 0785d39b-7218-0410-832d-ea1e28bc413d

disallow get_dof_indices() and a few others for nonactive cells

git-svn-id: https://svn.dealii.org/trunk@29728 0785d39b-7218-0410-832d-ea1e28bc413d

More gracefully handle the case that an exception is thrown on a task created by Threads::new_task. Unfortunately, I could not come up with a way to write a test for this case :-(

git-svn-id: https://svn.dealii.org/trunk@29727 0785d39b-7218-0410-832d-ea1e28bc413d

add some ignores

git-svn-id: https://svn.dealii.org/trunk@29725 0785d39b-7218-0410-832d-ea1e28bc413d

fix a bunch of tests

git-svn-id: https://svn.dealii.org/trunk@29724 0785d39b-7218-0410-832d-ea1e28bc413d

fix another spot where we ask an inactive cell for the subdomain

git-svn-id: https://svn.dealii.org/trunk@29723 0785d39b-7218-0410-832d-ea1e28bc413d

missed one directory with svn:ignores for cmake temp files

git-svn-id: https://svn.dealii.org/trunk@29722 0785d39b-7218-0410-832d-ea1e28bc413d

add cmake temp files to the ignores in the example directories, because we often do insource builds of the examples

git-svn-id: https://svn.dealii.org/trunk@29721 0785d39b-7218-0410-832d-ea1e28bc413d

make a lot more tests work

git-svn-id: https://svn.dealii.org/trunk@29720 0785d39b-7218-0410-832d-ea1e28bc413d

attempt to fix failing multigrid tests (is_locally_owned only works with active cells now)

git-svn-id: https://svn.dealii.org/trunk@29719 0785d39b-7218-0410-832d-ea1e28bc413d

Move default initialization to a central location.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29718 0785d39b-7218-0410-832d-ea1e28bc413d

Add some documentation.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29717 0785d39b-7218-0410-832d-ea1e28bc413d

Timo's fix for cmake output.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29716 0785d39b-7218-0410-832d-ea1e28bc413d

Add DEAL_II_WITH_64BIT_INDICES to the list of variables that are cached.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29715 0785d39b-7218-0410-832d-ea1e28bc413d

Update output.

git-svn-id: https://svn.dealii.org/trunk@29713 0785d39b-7218-0410-832d-ea1e28bc413d

Use an existing macro to set the default indices to 32bit.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29712 0785d39b-7218-0410-832d-ea1e28bc413d

also delete mpi OK files in make clean

git-svn-id: https://svn.dealii.org/trunk@29711 0785d39b-7218-0410-832d-ea1e28bc413d

fix svg out that with new subdomain changes

git-svn-id: https://svn.dealii.org/trunk@29710 0785d39b-7218-0410-832d-ea1e28bc413d

By default uses 32bit indices.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29709 0785d39b-7218-0410-832d-ea1e28bc413d

update tests to produce output on each cpu

git-svn-id: https://svn.dealii.org/trunk@29708 0785d39b-7218-0410-832d-ea1e28bc413d

fix last commit

git-svn-id: https://svn.dealii.org/trunk@29707 0785d39b-7218-0410-832d-ea1e28bc413d

make sure to close the file

git-svn-id: https://svn.dealii.org/trunk@29706 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29705 0785d39b-7218-0410-832d-ea1e28bc413d

make test work

git-svn-id: https://svn.dealii.org/trunk@29704 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a test.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29703 0785d39b-7218-0410-832d-ea1e28bc413d

subdomainids should only work for active cells, enforce this. Also forbid is_artificial(), is_ghost(), and is_locally_owned() if not active.

git-svn-id: https://svn.dealii.org/trunk@29702 0785d39b-7218-0410-832d-ea1e28bc413d

Add the preprocessor command to use 64bit global indices to CMake and check that PETSc and Trilinos are compatible with 64bit indices.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29701 0785d39b-7218-0410-832d-ea1e28bc413d

update test

git-svn-id: https://svn.dealii.org/trunk@29700 0785d39b-7218-0410-832d-ea1e28bc413d

tests should not use is_artificial() etc on cells that are not active

git-svn-id: https://svn.dealii.org/trunk@29699 0785d39b-7218-0410-832d-ea1e28bc413d

skip parts of loop in distribute_dofs() that is not necessary

git-svn-id: https://svn.dealii.org/trunk@29698 0785d39b-7218-0410-832d-ea1e28bc413d

More doc updates.

git-svn-id: https://svn.dealii.org/trunk@29697 0785d39b-7218-0410-832d-ea1e28bc413d

Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@29696 0785d39b-7218-0410-832d-ea1e28bc413d

Properly format comments.

git-svn-id: https://svn.dealii.org/trunk@29695 0785d39b-7218-0410-832d-ea1e28bc413d

yet another successful test

git-svn-id: https://svn.dealii.org/trunk@29694 0785d39b-7218-0410-832d-ea1e28bc413d

towards mixed cg/dg mg

git-svn-id: https://svn.dealii.org/trunk@29693 0785d39b-7218-0410-832d-ea1e28bc413d

Fix some tests.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29692 0785d39b-7218-0410-832d-ea1e28bc413d

remove double loop by two outputs

git-svn-id: https://svn.dealii.org/trunk@29689 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline + fix a bug in petsc_vector_base.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29688 0785d39b-7218-0410-832d-ea1e28bc413d

Better way for recording the exception: Only print its name, not the full info in order to avoid differences in encoding anonymous namespaces and future changes in function names

git-svn-id: https://svn.dealii.org/trunk@29687 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a bug in trilinos_vector_base.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29686 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust output

git-svn-id: https://svn.dealii.org/trunk@29685 0785d39b-7218-0410-832d-ea1e28bc413d

Fix some tests.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29684 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29683 0785d39b-7218-0410-832d-ea1e28bc413d

Remove stray typename

git-svn-id: https://svn.dealii.org/trunk@29682 0785d39b-7218-0410-832d-ea1e28bc413d

Fix test.

git-svn-id: https://svn.dealii.org/trunk@29681 0785d39b-7218-0410-832d-ea1e28bc413d

Fix uninitialized memory.

git-svn-id: https://svn.dealii.org/trunk@29680 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a few bugs with distribute. constraint_matrix_trilinos_bug/ncpu_10 still not working. Try to figure it out.

git-svn-id: https://svn.dealii.org/trunk@29679 0785d39b-7218-0410-832d-ea1e28bc413d

Make distribute() work properly with parallel::distributed::Vector. Also cleanup in extracting locally owned dofs of Trilinos vector. Distributing constraints with parallel::distributed::Vector has become simpler now, so use that in step-48.

git-svn-id: https://svn.dealii.org/trunk@29678 0785d39b-7218-0410-832d-ea1e28bc413d

Make ConstraintMatrix::distribute also work for block vectors. Needs a couple extra functions in the PETSc block vectors.

git-svn-id: https://svn.dealii.org/trunk@29677 0785d39b-7218-0410-832d-ea1e28bc413d

Remove tests that now no longer make sense.

git-svn-id: https://svn.dealii.org/trunk@29676 0785d39b-7218-0410-832d-ea1e28bc413d

Improve documentation slightly.

git-svn-id: https://svn.dealii.org/trunk@29675 0785d39b-7218-0410-832d-ea1e28bc413d

Check in a revision of the ConstraintMatrix::distribute patch. I'm not sure it actually works but the network here is going to shut down in a few minutes and I'd like to have it sent to the tester. Will re-evaluate later today.

git-svn-id: https://svn.dealii.org/trunk@29674 0785d39b-7218-0410-832d-ea1e28bc413d

revert accidental change from r29647

git-svn-id: https://svn.dealii.org/trunk@29673 0785d39b-7218-0410-832d-ea1e28bc413d

revert accidental change from r29647

git-svn-id: https://svn.dealii.org/trunk@29672 0785d39b-7218-0410-832d-ea1e28bc413d

Add necessary conversion.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29669 0785d39b-7218-0410-832d-ea1e28bc413d

update test output

git-svn-id: https://svn.dealii.org/trunk@29668 0785d39b-7218-0410-832d-ea1e28bc413d

fix test and output

git-svn-id: https://svn.dealii.org/trunk@29667 0785d39b-7218-0410-832d-ea1e28bc413d

add MPILogInitAll helper class for mpi tests

git-svn-id: https://svn.dealii.org/trunk@29666 0785d39b-7218-0410-832d-ea1e28bc413d

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_bigger_global_dof_indices_4@29665 0785d39b-7218-0410-832d-ea1e28bc413d

Need to call update_ghost_values with the current scheme of distribute

git-svn-id: https://svn.dealii.org/trunk@29664 0785d39b-7218-0410-832d-ea1e28bc413d