https://gitweb.dealii.org/

Matthias Maier [Thu, 18 Jul 2013 16:55:32 +0000 (16:55 +0000)]

Update license headers in header files

git-svn-id: https://svn.dealii.org/trunk@30036 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 18 Jul 2013 16:55:24 +0000 (16:55 +0000)]

Update Headers in CMake script file for the new license

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Matthias Maier [Thu, 18 Jul 2013 14:55:19 +0000 (14:55 +0000)]

Finalize template headers

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Wolfgang Bangerth [Thu, 18 Jul 2013 13:00:39 +0000 (13:00 +0000)]

Set props.

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Wolfgang Bangerth [Thu, 18 Jul 2013 12:59:28 +0000 (12:59 +0000)]

Adjust output after a recent change.

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Matthias Maier [Thu, 18 Jul 2013 11:10:32 +0000 (11:10 +0000)]

Fix some typos in comments

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Wolfgang Bangerth [Thu, 18 Jul 2013 01:47:00 +0000 (01:47 +0000)]

Do conversion of iterators right, following Timo's patches today.

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Wolfgang Bangerth [Wed, 17 Jul 2013 21:56:51 +0000 (21:56 +0000)]

Fix it the right way.

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Wolfgang Bangerth [Wed, 17 Jul 2013 21:12:28 +0000 (21:12 +0000)]

Re-enable the code from r30020 but initializing uninitialized data
(this caused the many testsuite failures).

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Timo Heister [Wed, 17 Jul 2013 20:58:49 +0000 (20:58 +0000)]

make the conversion from from Accessor to TriaIterators explicit

git-svn-id: https://svn.dealii.org/trunk@30027 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Wed, 17 Jul 2013 20:44:50 +0000 (20:44 +0000)]

CMake: Fix a typo in a comment

git-svn-id: https://svn.dealii.org/trunk@30026 0785d39b-7218-0410-832d-ea1e28bc413d

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Uwe Koecher [Wed, 17 Jul 2013 19:51:11 +0000 (19:51 +0000)]

changed vtk_cell_type dimension to 5, to allow dim=4 instantiation, as supposed by Wolfgang

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Wolfgang Bangerth [Wed, 17 Jul 2013 19:18:33 +0000 (19:18 +0000)]

Avoid warning about casting double to unsigned int.

git-svn-id: https://svn.dealii.org/trunk@30024 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Wed, 17 Jul 2013 14:36:21 +0000 (14:36 +0000)]

Do say if there is no additional information. Move code under an if() statement as well.

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Matthias Maier [Wed, 17 Jul 2013 11:08:43 +0000 (11:08 +0000)]

CMake: Change inclusion order so that metis gets processed before petsc

git-svn-id: https://svn.dealii.org/trunk@30022 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 16 Jul 2013 21:57:18 +0000 (21:57 +0000)]

Revert it once again. There are many errors that I don't see on my system...

git-svn-id: https://svn.dealii.org/trunk@30021 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 16 Jul 2013 19:45:42 +0000 (19:45 +0000)]

Fix a bug in VectorTools::project.

git-svn-id: https://svn.dealii.org/trunk@30020 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 16 Jul 2013 19:26:17 +0000 (19:26 +0000)]

Properly qualify shared_ptr.

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Timo Heister [Tue, 16 Jul 2013 19:15:59 +0000 (19:15 +0000)]

speed up DoF renumbering for distributed DoFHandler

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Wolfgang Bangerth [Tue, 16 Jul 2013 19:08:07 +0000 (19:08 +0000)]

VectorTools::project has worked in 1d for a while already. Test that as well.

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Timo Heister [Tue, 16 Jul 2013 18:32:49 +0000 (18:32 +0000)]

fix tests

git-svn-id: https://svn.dealii.org/trunk@30016 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 16 Jul 2013 16:53:13 +0000 (16:53 +0000)]

Remove wrong #include.

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Wolfgang Bangerth [Tue, 16 Jul 2013 16:51:56 +0000 (16:51 +0000)]

Ignore Eclipse project files in these directories.

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Wolfgang Bangerth [Tue, 16 Jul 2013 16:43:55 +0000 (16:43 +0000)]

Final version of the thread-local variant of WorkStream, using multiple scratch objects per thread. The story is in the comments documenting the lists of thread local variables.

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Wolfgang Bangerth [Tue, 16 Jul 2013 16:41:19 +0000 (16:41 +0000)]

Final version of the test.

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Wolfgang Bangerth [Tue, 16 Jul 2013 16:33:27 +0000 (16:33 +0000)]

Make things compile in C++98 mode as well.

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Matthias Maier [Tue, 16 Jul 2013 11:55:24 +0000 (11:55 +0000)]

CMake: Improve renaming

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Matthias Maier [Tue, 16 Jul 2013 11:17:36 +0000 (11:17 +0000)]

CMake: Somehow resolve the cache invalidation problems.

I have no idea why this is actually working...

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Matthias Maier [Tue, 16 Jul 2013 10:06:51 +0000 (10:06 +0000)]

CMake: Unconditionally mark a lot of variables as adavanced even if the
corresponding library could not be found.

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Matthias Maier [Tue, 16 Jul 2013 09:49:49 +0000 (09:49 +0000)]

*sigh* CMake is such a pile of ...

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Matthias Maier [Tue, 16 Jul 2013 09:30:58 +0000 (09:30 +0000)]

Write a small news item for the latest changes

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Matthias Maier [Tue, 16 Jul 2013 09:30:56 +0000 (09:30 +0000)]

CMake: Make a working C compiler optional. Do not require to have a strict
matching between C compiler and CXX compiler any more

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Guido Kanschat [Tue, 16 Jul 2013 08:23:09 +0000 (08:23 +0000)]

make virtual functions softly pure

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Timo Heister [Mon, 15 Jul 2013 23:40:32 +0000 (23:40 +0000)]

add to changelog

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Timo Heister [Mon, 15 Jul 2013 23:31:59 +0000 (23:31 +0000)]

merge unified linear algebra branch back into mainline

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Guido Kanschat [Mon, 15 Jul 2013 09:44:33 +0000 (09:44 +0000)]

change icon name to existing icon

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Matthias Maier [Sat, 13 Jul 2013 12:39:09 +0000 (12:39 +0000)]

Doc: Unify index.html and development/index.html

Also 30k get.

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Matthias Maier [Sat, 13 Jul 2013 12:39:08 +0000 (12:39 +0000)]

Doc: Resize navigation bar

Also 30k get.

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Matthias Maier [Sat, 13 Jul 2013 12:39:08 +0000 (12:39 +0000)]

Doc: Update development/navbar.html

Also 30k get.

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Matthias Maier [Sat, 13 Jul 2013 12:39:07 +0000 (12:39 +0000)]

Doc: Finish cmake-internals.html

Also 30k get.

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Matthias Maier [Sat, 13 Jul 2013 12:39:06 +0000 (12:39 +0000)]

Reindent comments in parameter_handler.h

Also 30k get.

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Matthias Maier [Sat, 13 Jul 2013 12:39:05 +0000 (12:39 +0000)]

Update documentation

git-svn-id: https://svn.dealii.org/trunk@29995 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Sat, 13 Jul 2013 12:39:04 +0000 (12:39 +0000)]

CMake: Update documentation

git-svn-id: https://svn.dealii.org/trunk@29994 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Sat, 13 Jul 2013 11:37:13 +0000 (11:37 +0000)]

CMake: Fix Trilinos' link interface

git-svn-id: https://svn.dealii.org/trunk@29993 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Sat, 13 Jul 2013 11:00:50 +0000 (11:00 +0000)]

CMake: Don't forget to guard librt as well

git-svn-id: https://svn.dealii.org/trunk@29992 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Sat, 13 Jul 2013 10:17:06 +0000 (10:17 +0000)]

CMake: Ensure that dynamic/static final linkage of the executable and the corresponding system libraries (shared/static) match

git-svn-id: https://svn.dealii.org/trunk@29991 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Sat, 13 Jul 2013 10:08:17 +0000 (10:08 +0000)]

CMake: Split preference for static libraries in its own configuration
toggle

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Matthias Maier [Sat, 13 Jul 2013 09:14:50 +0000 (09:14 +0000)]

CMake: Cleanup

git-svn-id: https://svn.dealii.org/trunk@29989 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Fri, 12 Jul 2013 23:58:56 +0000 (23:58 +0000)]

CMake: Bugfix: Clean up MPI_${_lang}_LIBRARIES if they are set to "-NOTFOUND".

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Timo Heister [Fri, 12 Jul 2013 18:58:21 +0000 (18:58 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_unify_linear_algebra@29987 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Fri, 12 Jul 2013 18:25:01 +0000 (18:25 +0000)]

add some timing to step-40

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Matthias Maier [Fri, 12 Jul 2013 14:33:56 +0000 (14:33 +0000)]

CMake: Add LAPACK/BLAS to the link interface of p4est

git-svn-id: https://svn.dealii.org/trunk@29985 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Fri, 12 Jul 2013 12:48:26 +0000 (12:48 +0000)]

CMake: Use "-pthread" as well when determining whether lapack is usable

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Wolfgang Bangerth [Fri, 12 Jul 2013 01:10:48 +0000 (01:10 +0000)]

Move 'template <typename T>' to after the class documentation.

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Matthias Maier [Thu, 11 Jul 2013 22:44:44 +0000 (22:44 +0000)]

CMake: Bugfix: Link static report_features correctly

git-svn-id: https://svn.dealii.org/trunk@29982 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 22:44:42 +0000 (22:44 +0000)]

Bugfix in report_features.cc.in

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Matthias Maier [Thu, 11 Jul 2013 22:44:41 +0000 (22:44 +0000)]

CMake: Bugfix, use correct order

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Matthias Maier [Thu, 11 Jul 2013 22:17:28 +0000 (22:17 +0000)]

CMake: Rename "(CMAKE|DEAL_II)_SHARED_" to "DEAL_II_" because these variables are used not just for shared library linkage...

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Matthias Maier [Thu, 11 Jul 2013 22:17:25 +0000 (22:17 +0000)]

CMake: Add support for fully static linkage

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Wolfgang Bangerth [Thu, 11 Jul 2013 20:44:11 +0000 (20:44 +0000)]

Uniformly indent member variable names.

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Matthias Maier [Thu, 11 Jul 2013 17:44:31 +0000 (17:44 +0000)]

CMake: Let FindMETIS search for libparmetis as well

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Matthias Maier [Thu, 11 Jul 2013 17:44:30 +0000 (17:44 +0000)]

CMake: Cleanup

git-svn-id: https://svn.dealii.org/trunk@29975 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 17:23:17 +0000 (17:23 +0000)]

CMake: One more round to get a sane link interface *yay*

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Matthias Maier [Thu, 11 Jul 2013 16:44:05 +0000 (16:44 +0000)]

CMake: OK, third try

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Matthias Maier [Thu, 11 Jul 2013 16:22:58 +0000 (16:22 +0000)]

CMake: Fix up some remaining link interfaces

git-svn-id: https://svn.dealii.org/trunk@29972 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Thu, 11 Jul 2013 15:36:51 +0000 (15:36 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_unify_linear_algebra@29971 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 15:30:35 +0000 (15:30 +0000)]

CMake: Fix link interface for p4est

git-svn-id: https://svn.dealii.org/trunk@29970 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 15:24:20 +0000 (15:24 +0000)]

CMake: Do it correctly

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Timo Heister [Thu, 11 Jul 2013 15:09:08 +0000 (15:09 +0000)]

documentation fixes by Oleh Krehel

git-svn-id: https://svn.dealii.org/trunk@29968 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 14:39:34 +0000 (14:39 +0000)]

Resolve a cache invalidation issue

git-svn-id: https://svn.dealii.org/trunk@29967 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Thu, 11 Jul 2013 14:21:04 +0000 (14:21 +0000)]

CMake: Fix link interface for static blas/lapack

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Matthias Maier [Thu, 11 Jul 2013 13:10:44 +0000 (13:10 +0000)]

CMake: Prefer static libs for boost if available and BUILD_SHARED_LIBS is false

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Matthias Maier [Thu, 11 Jul 2013 11:52:21 +0000 (11:52 +0000)]

CMake: Prefer static archives if BUILD_SHARED_LIBS is set to off

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Matthias Maier [Wed, 10 Jul 2013 22:42:23 +0000 (22:42 +0000)]

Bugfix: Fix a compilation issue if DEAL_II_WITH_UMFPACK=FALSE

git-svn-id: https://svn.dealii.org/trunk@29963 0785d39b-7218-0410-832d-ea1e28bc413d

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Matthias Maier [Wed, 10 Jul 2013 22:35:08 +0000 (22:35 +0000)]

CMake: Fix a typo

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Matthias Maier [Wed, 10 Jul 2013 22:29:57 +0000 (22:29 +0000)]

CMAke: Bugfix. Search for petscvariables in the right order

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Wolfgang Bangerth [Tue, 9 Jul 2013 21:39:19 +0000 (21:39 +0000)]

Undo accidental part of previous patch.

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Wolfgang Bangerth [Tue, 9 Jul 2013 21:37:20 +0000 (21:37 +0000)]

Patch by Denis Davydov: Get the tensor extractors working right.

git-svn-id: https://svn.dealii.org/trunk@29959 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 9 Jul 2013 21:28:29 +0000 (21:28 +0000)]

Further tweaks by Denis Davydov and add a test.

git-svn-id: https://svn.dealii.org/trunk@29958 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Tue, 9 Jul 2013 14:45:02 +0000 (14:45 +0000)]

More minimizing.

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Wolfgang Bangerth [Tue, 9 Jul 2013 14:38:08 +0000 (14:38 +0000)]

Latest version of the test. Really minimal. Still fails with the WorkStream patches I have locally :-(

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Wolfgang Bangerth [Mon, 8 Jul 2013 19:43:27 +0000 (19:43 +0000)]

Patch by Denis Davydov: Add the missing functions for the Tensor extractors.

git-svn-id: https://svn.dealii.org/trunk@29955 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Mon, 8 Jul 2013 18:13:17 +0000 (18:13 +0000)]

Add accessor functions that take a whole set of indices all at once.

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Wolfgang Bangerth [Mon, 8 Jul 2013 14:01:00 +0000 (14:01 +0000)]

Minimal form of the test. This fails with my patches to work_stream.h because we step on some other array's memory...

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Wolfgang Bangerth [Mon, 8 Jul 2013 13:55:30 +0000 (13:55 +0000)]

Fix a bunch of typos in comments, using the script from https://github.com/vlajos/misspell_fixer .

git-svn-id: https://svn.dealii.org/trunk@29952 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Mon, 8 Jul 2013 05:54:44 +0000 (05:54 +0000)]

Test case for parallel block vector

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Wolfgang Bangerth [Mon, 8 Jul 2013 04:24:31 +0000 (04:24 +0000)]

The testcase is getting shorter and shorter...

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Wolfgang Bangerth [Mon, 8 Jul 2013 04:05:23 +0000 (04:05 +0000)]

Yet another, further reduced version.

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Wolfgang Bangerth [Mon, 8 Jul 2013 03:51:51 +0000 (03:51 +0000)]

Yet another version of this test. It should be producing the same result every time, but it doesn't with my current version of work_stream.h.

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Wolfgang Bangerth [Mon, 8 Jul 2013 03:37:55 +0000 (03:37 +0000)]

Revert to a state of the test that really does fail.

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Wolfgang Bangerth [Mon, 8 Jul 2013 02:47:56 +0000 (02:47 +0000)]

Another version which, sadly, shows yet another problem: the fact that Vector::l1_norm() produces different results every time...

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Wolfgang Bangerth [Mon, 8 Jul 2013 02:23:31 +0000 (02:23 +0000)]

A much reduced testcase. Should produce the same number every time, but doesn't.

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Wolfgang Bangerth [Mon, 8 Jul 2013 02:14:30 +0000 (02:14 +0000)]

Remove a dead piece of left-over from an apparently earlier time.

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Timo Heister [Sun, 7 Jul 2013 16:07:59 +0000 (16:07 +0000)]

leave comment

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Timo Heister [Sun, 7 Jul 2013 16:01:03 +0000 (16:01 +0000)]

maybe fix ConstraintMatrix::set_zero for parallel::distributed::BlockVector

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Timo Heister [Sun, 7 Jul 2013 15:47:45 +0000 (15:47 +0000)]

fix test output

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Timo Heister [Sun, 7 Jul 2013 15:47:02 +0000 (15:47 +0000)]

fix bug in ConstraintMatrix::set_zero

git-svn-id: https://svn.dealii.org/trunk@29940 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Sun, 7 Jul 2013 15:31:15 +0000 (15:31 +0000)]

add test that documents bug in ConstraintMatrix::set_zero

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Wolfgang Bangerth [Fri, 5 Jul 2013 23:40:50 +0000 (23:40 +0000)]

Qualify a call to (std::)copy.

git-svn-id: https://svn.dealii.org/trunk@29938 0785d39b-7218-0410-832d-ea1e28bc413d

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Luca Heltai [Thu, 4 Jul 2013 12:38:52 +0000 (12:38 +0000)]

Wrapped MPI_COMM_WORLD definition around an #ifdef. Trilinos already defines this if we are serial, and we get warnings with multiple definitions.

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