]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
16 months agoAdd a test.
Wolfgang Bangerth [Mon, 15 May 2023 22:09:38 +0000 (16:09 -0600)]
Add a test.

16 months agoAdjust tests to our new interface.
Wolfgang Bangerth [Mon, 15 May 2023 22:09:21 +0000 (16:09 -0600)]
Adjust tests to our new interface.

16 months agoConvert ARKode interfaces to conform to our callback policy.
Wolfgang Bangerth [Mon, 15 May 2023 22:07:51 +0000 (16:07 -0600)]
Convert ARKode interfaces to conform to our callback policy.

16 months agoMerge pull request #15215 from bergbauer/fe_face_point_evaluation
Martin Kronbichler [Thu, 18 May 2023 15:06:40 +0000 (17:06 +0200)]
Merge pull request #15215 from bergbauer/fe_face_point_evaluation

Face path for FEPointEvaluation

16 months agoMerge pull request #15237 from bangerth/nox-2
David Wells [Thu, 18 May 2023 12:45:50 +0000 (08:45 -0400)]
Merge pull request #15237 from bangerth/nox-2

Properly treat exceptions in a user callback in NOX.

16 months agoMerge pull request #15236 from bangerth/nox-1
Timo Heister [Thu, 18 May 2023 12:08:17 +0000 (08:08 -0400)]
Merge pull request #15236 from bangerth/nox-1

Minor updates to the NOX solver documentation.

16 months agoProperly treat exceptions in a user callback in NOX. 15237/head
Wolfgang Bangerth [Thu, 18 May 2023 04:42:58 +0000 (22:42 -0600)]
Properly treat exceptions in a user callback in NOX.

16 months agoMinor updates to the NOX solver documentation. 15236/head
Wolfgang Bangerth [Thu, 18 May 2023 04:38:07 +0000 (22:38 -0600)]
Minor updates to the NOX solver documentation.

16 months agoImplement path for is_face = true 15215/head
Maximilian Bergbauer [Fri, 28 Apr 2023 12:35:01 +0000 (14:35 +0200)]
Implement path for is_face = true

16 months agoMerge pull request #15230 from masterleinad/fix_patterns_lists_of_lists
Daniel Arndt [Wed, 17 May 2023 11:48:30 +0000 (07:48 -0400)]
Merge pull request #15230 from masterleinad/fix_patterns_lists_of_lists

16 months agoMerge pull request #15231 from tjhei/doc_petsc_snes
Wolfgang Bangerth [Wed, 17 May 2023 02:18:03 +0000 (20:18 -0600)]
Merge pull request #15231 from tjhei/doc_petsc_snes

improve documentation for PETSc SNES

16 months agoimprove documentation for PETSc SNES 15231/head
Timo Heister [Wed, 17 May 2023 00:24:45 +0000 (20:24 -0400)]
improve documentation for PETSc SNES

16 months agoUse AssertThrow 15230/head
Daniel Arndt [Tue, 16 May 2023 22:11:00 +0000 (18:11 -0400)]
Use AssertThrow

16 months agoUse std::strlen
Daniel Arndt [Tue, 16 May 2023 22:06:52 +0000 (18:06 -0400)]
Use std::strlen

16 months agoMerge pull request #15220 from richardschu/compiler_warnings_redo
Wolfgang Bangerth [Tue, 16 May 2023 21:34:10 +0000 (15:34 -0600)]
Merge pull request #15220 from richardschu/compiler_warnings_redo

fix some compiler warnings

16 months agoMerge pull request #15228 from kronbichler/compile_warning2
Timo Heister [Tue, 16 May 2023 20:16:03 +0000 (16:16 -0400)]
Merge pull request #15228 from kronbichler/compile_warning2

Avoid compiler warning

16 months agoPatterns: Fix parsing lists of lists
Daniel Arndt [Tue, 16 May 2023 17:57:16 +0000 (13:57 -0400)]
Patterns: Fix parsing lists of lists

16 months agoMerge pull request #15222 from bangerth/6
Martin Kronbichler [Tue, 16 May 2023 12:07:23 +0000 (14:07 +0200)]
Merge pull request #15222 from bangerth/6

Minor doc improvement in step-6.

16 months agoAvoid compiler warning 15228/head
Martin Kronbichler [Tue, 16 May 2023 12:02:04 +0000 (14:02 +0200)]
Avoid compiler warning

16 months agoMerge pull request #15221 from bangerth/77
Martin Kronbichler [Tue, 16 May 2023 08:05:59 +0000 (10:05 +0200)]
Merge pull request #15221 from bangerth/77

Update output of step-77.

16 months agofixed some compiler warnings in tria.cc 15220/head
Richard Schussnig [Tue, 16 May 2023 07:23:32 +0000 (09:23 +0200)]
fixed some compiler warnings in tria.cc

16 months agoMerge pull request #15186 from bangerth/nox
Timo Heister [Tue, 16 May 2023 05:32:07 +0000 (01:32 -0400)]
Merge pull request #15186 from bangerth/nox

Let NOX callbacks conform to our new standard for callback errors.

16 months agoMerge pull request #15216 from sebproell/sundials-remove-copy
Daniel Arndt [Tue, 16 May 2023 02:29:47 +0000 (22:29 -0400)]
Merge pull request #15216 from sebproell/sundials-remove-copy

16 months agoMerge pull request #15199 from masterleinad/find_non_system_hdf5
David Wells [Mon, 15 May 2023 21:19:52 +0000 (17:19 -0400)]
Merge pull request #15199 from masterleinad/find_non_system_hdf5

Allow finding user-installed HDF5

16 months agoMinor doc improvement in step-6. 15222/head
Wolfgang Bangerth [Mon, 15 May 2023 20:58:26 +0000 (14:58 -0600)]
Minor doc improvement in step-6.

16 months agoUpdate output of step-77. 15221/head
Wolfgang Bangerth [Mon, 15 May 2023 20:57:48 +0000 (14:57 -0600)]
Update output of step-77.

16 months agoMerge pull request #15205 from tamiko/create_compile_commands_symlink
Daniel Arndt [Mon, 15 May 2023 13:43:19 +0000 (09:43 -0400)]
Merge pull request #15205 from tamiko/create_compile_commands_symlink

16 months agoSUNDIALS: remove outdated copy functionality 15216/head
Sebastian Proell [Mon, 15 May 2023 08:05:30 +0000 (10:05 +0200)]
SUNDIALS: remove outdated copy functionality

16 months agoMerge pull request #15189 from bangerth/kinsol-3
Martin Kronbichler [Mon, 15 May 2023 06:32:30 +0000 (08:32 +0200)]
Merge pull request #15189 from bangerth/kinsol-3

Add a test with an irrecoverable failure of KINSOL.

16 months agoMerge pull request #15194 from sebproell/kinsol-nvector-view
Wolfgang Bangerth [Mon, 15 May 2023 01:33:15 +0000 (19:33 -0600)]
Merge pull request #15194 from sebproell/kinsol-nvector-view

KINSOL: do not copy vectors internally

16 months agoMerge pull request #15214 from sebproell/step-77-nox
Wolfgang Bangerth [Mon, 15 May 2023 01:27:54 +0000 (19:27 -0600)]
Merge pull request #15214 from sebproell/step-77-nox

Fix step-77 NOX test

16 months agoMerge pull request #15207 from kronbichler/variable_type
Peter Munch [Sun, 14 May 2023 17:18:01 +0000 (19:18 +0200)]
Merge pull request #15207 from kronbichler/variable_type

Tensor product kernels: Use the right type in some templated functions

16 months agoKINSOL: do not copy vectors internally 15194/head
Sebastian Proell [Thu, 11 May 2023 14:19:48 +0000 (16:19 +0200)]
KINSOL: do not copy vectors internally

16 months agoAdd changelog entry for fixed step-77 15214/head
Sebastian Proell [Sun, 14 May 2023 13:59:25 +0000 (15:59 +0200)]
Add changelog entry for fixed step-77

16 months agoFix step-77 with NOX: zero out residual
Sebastian Proell [Sun, 14 May 2023 13:58:50 +0000 (15:58 +0200)]
Fix step-77 with NOX: zero out residual

16 months agoMerge pull request #15212 from drwells/bundled-kokkos-gcc-13-fix
Wolfgang Bangerth [Sun, 14 May 2023 03:43:48 +0000 (21:43 -0600)]
Merge pull request #15212 from drwells/bundled-kokkos-gcc-13-fix

Fix Kokkos compilation with GCC 13.

16 months agoMerge pull request #15211 from bergbauer/fe_point_consistent_template_arg
Martin Kronbichler [Sat, 13 May 2023 21:28:41 +0000 (23:28 +0200)]
Merge pull request #15211 from bergbauer/fe_point_consistent_template_arg

FEPointEvaluation: Use template argument consistently

16 months agoMerge pull request #15208 from kronbichler/fix_documentation
Wolfgang Bangerth [Sat, 13 May 2023 20:22:49 +0000 (14:22 -0600)]
Merge pull request #15208 from kronbichler/fix_documentation

Fix typo in documentation

16 months agoMerge pull request #15210 from sebproell/step77-zero-residual
Wolfgang Bangerth [Sat, 13 May 2023 20:21:18 +0000 (14:21 -0600)]
Merge pull request #15210 from sebproell/step77-zero-residual

Fix step-77: zero out residual before assembly

16 months agoFix Kokkos compilation with GCC 13. 15212/head
David Wells [Sat, 13 May 2023 12:51:29 +0000 (08:51 -0400)]
Fix Kokkos compilation with GCC 13.

16 months agoUse template argument consistently 15211/head
Maximilian Bergbauer [Sat, 13 May 2023 15:07:18 +0000 (17:07 +0200)]
Use template argument consistently

16 months agoFix step-77: zero out residual before assembly 15210/head
Sebastian Proell [Sat, 13 May 2023 09:56:17 +0000 (11:56 +0200)]
Fix step-77: zero out residual before assembly

16 months agoFix typo in documentation 15208/head
Martin Kronbichler [Sat, 13 May 2023 07:54:33 +0000 (09:54 +0200)]
Fix typo in documentation

16 months agoTensor product kernels: Use the right type in some templated functions 15207/head
Martin Kronbichler [Sat, 13 May 2023 07:50:19 +0000 (09:50 +0200)]
Tensor product kernels: Use the right type in some templated functions

16 months agoMerge pull request #15196 from bangerth/import-3
Martin Kronbichler [Sat, 13 May 2023 07:48:35 +0000 (09:48 +0200)]
Merge pull request #15196 from bangerth/import-3

Avoid variables named 'import', part 2.

16 months agoMerge pull request #15191 from bangerth/import
Martin Kronbichler [Sat, 13 May 2023 07:47:14 +0000 (09:47 +0200)]
Merge pull request #15191 from bangerth/import

Avoid variables named 'import'.

16 months agoMerge pull request #15193 from bergbauer/reduce_overhead_fe_face_normal_eval
Martin Kronbichler [Sat, 13 May 2023 07:46:48 +0000 (09:46 +0200)]
Merge pull request #15193 from bergbauer/reduce_overhead_fe_face_normal_eval

Remove overhead from AlignedVector in FEFaceNormalEvaluationImpl

16 months agoadd an entry to .gitignore for build directories of example steps 15205/head
Matthias Maier [Fri, 12 May 2023 16:31:17 +0000 (11:31 -0500)]
add an entry to .gitignore for build directories of example steps

16 months agoCMake: create a compile_commands.json symlink
Matthias Maier [Fri, 12 May 2023 16:05:22 +0000 (11:05 -0500)]
CMake: create a compile_commands.json symlink

Modern IDEs such as VSCode use a separate build directory for
configuring and compiling a project (such as our example steps).

Unfortunately, this sometimes confuses language servers such as clangd
that might fail to find the correct compile_commands.json in that build
directory. Let's work around this issue by simply creating a symlink
from the source directory pointing to the compile_commands.json file.

As a sanity check, if there is already a compile_commands.json file
present, or if the source and build directory are the same we simply do
nothing.

16 months agoMerge pull request #15206 from masterleinad/fix_warnings_gcc_13_1
Wolfgang Bangerth [Fri, 12 May 2023 21:08:32 +0000 (15:08 -0600)]
Merge pull request #15206 from masterleinad/fix_warnings_gcc_13_1

Fix warnings with gcc-13.1

16 months agoFix warnings with gcc-13.1 15206/head
Daniel Arndt [Fri, 12 May 2023 17:38:40 +0000 (13:38 -0400)]
Fix warnings with gcc-13.1

16 months agoAllow finding user-installed HDF5 15199/head
Daniel Arndt [Thu, 11 May 2023 20:17:23 +0000 (16:17 -0400)]
Allow finding user-installed HDF5

16 months agoMerge pull request #15188 from bangerth/kinsol-2
Daniel Arndt [Thu, 11 May 2023 17:06:14 +0000 (13:06 -0400)]
Merge pull request #15188 from bangerth/kinsol-2

16 months agoAvoid variables named 'import', part 2. 15196/head
Wolfgang Bangerth [Thu, 11 May 2023 17:05:52 +0000 (11:05 -0600)]
Avoid variables named 'import', part 2.

16 months agoMerge pull request #15187 from bangerth/kinsol-1
Daniel Arndt [Thu, 11 May 2023 16:59:37 +0000 (12:59 -0400)]
Merge pull request #15187 from bangerth/kinsol-1

16 months agoReduce overhead of AlignedVector 15193/head
Maximilian Bergbauer [Thu, 11 May 2023 13:10:23 +0000 (15:10 +0200)]
Reduce overhead of AlignedVector

16 months agoMerge pull request #15141 from peterrum/MGTwoLevelTransferBase
Luca Heltai [Thu, 11 May 2023 12:31:41 +0000 (15:31 +0300)]
Merge pull request #15141 from peterrum/MGTwoLevelTransferBase

Add two level transfer operator between non-nested levels

16 months agoMerge pull request #15192 from bangerth/test
Peter Munch [Thu, 11 May 2023 05:38:04 +0000 (07:38 +0200)]
Merge pull request #15192 from bangerth/test

Fix compilation of a test.

16 months agoFix compilation of a test. 15192/head
Wolfgang Bangerth [Wed, 10 May 2023 19:36:51 +0000 (13:36 -0600)]
Fix compilation of a test.

16 months agoAvoid variables named 'import'. 15191/head
Wolfgang Bangerth [Wed, 10 May 2023 19:08:51 +0000 (13:08 -0600)]
Avoid variables named 'import'.

16 months agofirst part of review 15141/head
Marco Feder [Thu, 4 May 2023 13:37:40 +0000 (15:37 +0200)]
first part of review

16 months agoAdd interface for non-nested two level transfer
Peter Munch [Mon, 3 Apr 2023 12:02:03 +0000 (14:02 +0200)]
Add interface for non-nested two level transfer

Co-authored-by: peterrum <peterrmuench@gmail.com>
16 months agoAdd a test with an irrecoverable failure of KINSOL. 15189/head
Wolfgang Bangerth [Tue, 9 May 2023 16:11:03 +0000 (10:11 -0600)]
Add a test with an irrecoverable failure of KINSOL.

16 months agoClean up after ourselves. 15188/head
Wolfgang Bangerth [Tue, 9 May 2023 15:19:05 +0000 (09:19 -0600)]
Clean up after ourselves.

16 months agoCatch and rethrow *all* exceptions. 15187/head
Wolfgang Bangerth [Fri, 5 May 2023 20:33:21 +0000 (14:33 -0600)]
Catch and rethrow *all* exceptions.

16 months agoMerge pull request #15178 from bangerth/kinsol-exc
Timo Heister [Tue, 9 May 2023 19:59:01 +0000 (15:59 -0400)]
Merge pull request #15178 from bangerth/kinsol-exc

Let KINSOL callbacks conform to our new standard for callback errors.

16 months agoAdd a test that checks NOX error handling. 15186/head
Wolfgang Bangerth [Tue, 9 May 2023 16:48:16 +0000 (10:48 -0600)]
Add a test that checks NOX error handling.

16 months agoDeal with obnoxious NOX ways of reporting errors.
Wolfgang Bangerth [Tue, 9 May 2023 16:47:18 +0000 (10:47 -0600)]
Deal with obnoxious NOX ways of reporting errors.

16 months agoConvert NOX tests to not return zero to indicate success.
Wolfgang Bangerth [Tue, 9 May 2023 16:22:11 +0000 (10:22 -0600)]
Convert NOX tests to not return zero to indicate success.

16 months agoDocument what function we are setting up.
Wolfgang Bangerth [Tue, 9 May 2023 16:16:07 +0000 (10:16 -0600)]
Document what function we are setting up.

16 months agoConvert NOX to use the new exception scheme.
Wolfgang Bangerth [Fri, 5 May 2023 21:06:37 +0000 (15:06 -0600)]
Convert NOX to use the new exception scheme.

16 months agoMerge pull request #15182 from kronbichler/reduce_overhead2
Wolfgang Bangerth [Tue, 9 May 2023 18:29:55 +0000 (12:29 -0600)]
Merge pull request #15182 from kronbichler/reduce_overhead2

Reduce overhead in calls to tensor product value function

16 months agoMerge pull request #15159 from tjhei/mpi_comm_by_value
Wolfgang Bangerth [Tue, 9 May 2023 18:28:12 +0000 (12:28 -0600)]
Merge pull request #15159 from tjhei/mpi_comm_by_value

pass MPI_Comm by value

16 months agochangelog 15159/head
Timo Heister [Mon, 8 May 2023 19:12:39 +0000 (15:12 -0400)]
changelog

16 months agoAdd a changelog entry. 15178/head
Wolfgang Bangerth [Mon, 8 May 2023 19:26:30 +0000 (13:26 -0600)]
Add a changelog entry.

16 months agopass MPI_Comm by value
Timo Heister [Mon, 24 Apr 2023 20:10:00 +0000 (16:10 -0400)]
pass MPI_Comm by value

16 months agoMerge pull request #15185 from kronbichler/avoid_load
Daniel Arndt [Mon, 8 May 2023 17:07:13 +0000 (13:07 -0400)]
Merge pull request #15185 from kronbichler/avoid_load

16 months agoMerge pull request #15132 from bangerth/concepts
Daniel Arndt [Mon, 8 May 2023 15:00:18 +0000 (11:00 -0400)]
Merge pull request #15132 from bangerth/concepts

16 months agoMerge pull request #15183 from kronbichler/improve_poly
Daniel Arndt [Mon, 8 May 2023 14:55:08 +0000 (10:55 -0400)]
Merge pull request #15183 from kronbichler/improve_poly

16 months agoWeight kernel for multigrid: Simplify aliasing analysis for compiler 15185/head
Martin Kronbichler [Mon, 8 May 2023 13:47:50 +0000 (15:47 +0200)]
Weight kernel for multigrid: Simplify aliasing analysis for compiler

16 months agoMerge pull request #15184 from bangerth/scope-exit
Daniel Arndt [Mon, 8 May 2023 12:45:55 +0000 (08:45 -0400)]
Merge pull request #15184 from bangerth/scope-exit

16 months agoReduce operation count in polynomial evaluation 15183/head
Martin Kronbichler [Thu, 4 May 2023 09:14:29 +0000 (11:14 +0200)]
Reduce operation count in polynomial evaluation

16 months agoMerge pull request #15154 from jh66637/reinit_rpe_with_distributed_compute_point_loca...
Peter Munch [Mon, 8 May 2023 07:14:42 +0000 (09:14 +0200)]
Merge pull request #15154 from jh66637/reinit_rpe_with_distributed_compute_point_locations

make it possible to fill RPE with GT::DistributedComputePointLocation…

16 months agoRemove another ArrayView 15182/head
Martin Kronbichler [Fri, 5 May 2023 08:45:50 +0000 (10:45 +0200)]
Remove another ArrayView

16 months agoReduce overhead in calls to tensor product value function
Martin Kronbichler [Thu, 4 May 2023 09:15:27 +0000 (11:15 +0200)]
Reduce overhead in calls to tensor product value function

16 months agoMerge pull request #15177 from bangerth/const
Peter Munch [Mon, 8 May 2023 05:34:20 +0000 (07:34 +0200)]
Merge pull request #15177 from bangerth/const

Make some variables in a few tests 'const'.

16 months agoMerge pull request #15173 from bangerth/snes
Peter Munch [Mon, 8 May 2023 05:33:59 +0000 (07:33 +0200)]
Merge pull request #15173 from bangerth/snes

Add the PETSc SNES version of step-77 as a test.

16 months agoMerge pull request #15171 from bangerth/77-4
Peter Munch [Mon, 8 May 2023 05:33:30 +0000 (07:33 +0200)]
Merge pull request #15171 from bangerth/77-4

Let doxygen resolve a citation in step-77.

16 months agoMerge pull request #15169 from bangerth/inline
Peter Munch [Mon, 8 May 2023 05:32:54 +0000 (07:32 +0200)]
Merge pull request #15169 from bangerth/inline

Move a function out of line.

16 months agoMerge pull request #15144 from bangerth/vec
Peter Munch [Mon, 8 May 2023 05:32:11 +0000 (07:32 +0200)]
Merge pull request #15144 from bangerth/vec

Clarify the documentation of a reinit() function.

16 months agoMerge pull request #15138 from bangerth/fiv
Peter Munch [Mon, 8 May 2023 05:30:58 +0000 (07:30 +0200)]
Merge pull request #15138 from bangerth/fiv

Implement alternative rules what quadrature/mapping object to use in FEInterfaceValues::reinit().

16 months agoMerge pull request #15128 from bangerth/77-2
Peter Munch [Mon, 8 May 2023 05:22:20 +0000 (07:22 +0200)]
Merge pull request #15128 from bangerth/77-2

In step-77, also talk about the other nonlinear solver packages we support.

16 months agoMark constructor as 'explicit'. 15184/head
Wolfgang Bangerth [Sun, 7 May 2023 17:16:00 +0000 (11:16 -0600)]
Mark constructor as 'explicit'.

16 months agoMark special functions as =deleted.
Wolfgang Bangerth [Sun, 7 May 2023 17:15:09 +0000 (11:15 -0600)]
Mark special functions as =deleted.

16 months agoAdd a changelog entry.
Wolfgang Bangerth [Fri, 5 May 2023 20:50:05 +0000 (14:50 -0600)]
Add a changelog entry.

16 months agoAdd a test.
Wolfgang Bangerth [Fri, 5 May 2023 21:06:00 +0000 (15:06 -0600)]
Add a test.

16 months agoAdd a ScopeExit function.
Wolfgang Bangerth [Fri, 5 May 2023 20:37:15 +0000 (14:37 -0600)]
Add a ScopeExit function.

16 months agomake it possible to fill RPE with GT::DistributedComputePointLocationsInternal 15154/head
Johannes Heinz [Fri, 28 Apr 2023 09:02:36 +0000 (11:02 +0200)]
make it possible to fill RPE with GT::DistributedComputePointLocationsInternal

16 months agoMerge pull request #15179 from bangerth/nox-test
Peter Munch [Sun, 7 May 2023 10:30:08 +0000 (12:30 +0200)]
Merge pull request #15179 from bangerth/nox-test

Fix up the single NOX test

16 months agoMerge pull request #15181 from kronbichler/fix_missing_symbol
Wolfgang Bangerth [Fri, 5 May 2023 18:32:51 +0000 (12:32 -0600)]
Merge pull request #15181 from kronbichler/fix_missing_symbol

Avoid missing symbols and use constexpr functions instead


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