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https://gitweb.dealii.org/ - dealii-svn.git/log
heister [Mon, 18 Nov 2013 01:43:40 +0000 (01:43 +0000)]
fix template instantiations for GridGenerator::parallelogram, do not pass array as a reference
git-svn-id: https://svn.dealii.org/trunk@31695
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bangerth [Mon, 18 Nov 2013 01:32:14 +0000 (01:32 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@31694
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bangerth [Mon, 18 Nov 2013 01:31:26 +0000 (01:31 +0000)]
Fix the failure of find_cell_10a by implementing a better stopping criterion for the Newton iteration, using a variable metric Newton method.
git-svn-id: https://svn.dealii.org/trunk@31693
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heister [Mon, 18 Nov 2013 00:04:49 +0000 (00:04 +0000)]
fix typo
git-svn-id: https://svn.dealii.org/trunk@31692
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bangerth [Sun, 17 Nov 2013 19:36:35 +0000 (19:36 +0000)]
Also run test in optimized mode.
git-svn-id: https://svn.dealii.org/trunk@31691
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bangerth [Sun, 17 Nov 2013 19:35:59 +0000 (19:35 +0000)]
Fix one testcase, see https://code.google.com/p/dealii/issues/detail?id=134 . Since we are having so much trouble with this function, I also left my debug code in there, guarded with \#ifdef DEBUG_NO_NORMAL_FLUX. Adjust testcase.
git-svn-id: https://svn.dealii.org/trunk@31690
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bangerth [Sun, 17 Nov 2013 19:35:33 +0000 (19:35 +0000)]
Fix one testcase, see https://code.google.com/p/dealii/issues/detail?id=134 . Since we are having so much trouble with this function, I also left my debug code in there, guarded with \#ifdef DEBUG_NO_NORMAL_FLUX.
git-svn-id: https://svn.dealii.org/trunk@31689
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kronbichler [Sun, 17 Nov 2013 15:45:16 +0000 (15:45 +0000)]
Fix non-MPI case
git-svn-id: https://svn.dealii.org/trunk@31688
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kronbichler [Sun, 17 Nov 2013 15:44:08 +0000 (15:44 +0000)]
Fix description
git-svn-id: https://svn.dealii.org/trunk@31687
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steigemann [Sun, 17 Nov 2013 14:49:49 +0000 (14:49 +0000)]
Fixed: FETools::inteprolation_difference was not working with TrilinosWrappers::MPI::Vectors with ghost entries, also, TrilinosWrappers::VectorBase has a get_mpi_communicator method now.
git-svn-id: https://svn.dealii.org/trunk@31686
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bangerth [Sat, 16 Nov 2013 12:46:15 +0000 (12:46 +0000)]
Fix a note in a comment.
git-svn-id: https://svn.dealii.org/trunk@31684
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maier [Sat, 16 Nov 2013 09:39:22 +0000 (09:39 +0000)]
Testsuite: Fix data_out_stack_0?
git-svn-id: https://svn.dealii.org/trunk@31683
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maier [Sat, 16 Nov 2013 08:31:05 +0000 (08:31 +0000)]
Bugfix: Define FP_USE_THREAD_SAFE_EVAL in case of enabled multithreading support.
git-svn-id: https://svn.dealii.org/trunk@31682
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maier [Sat, 16 Nov 2013 08:04:28 +0000 (08:04 +0000)]
Set missing svn:keywords property on a bunch of files
git-svn-id: https://svn.dealii.org/trunk@31681
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maier [Sat, 16 Nov 2013 07:51:41 +0000 (07:51 +0000)]
Fix a lot of stray $Id$s
git-svn-id: https://svn.dealii.org/trunk@31680
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bangerth [Fri, 15 Nov 2013 23:12:48 +0000 (23:12 +0000)]
Fix error message.
git-svn-id: https://svn.dealii.org/trunk@31679
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bangerth [Fri, 15 Nov 2013 21:28:50 +0000 (21:28 +0000)]
Minor language fix.
git-svn-id: https://svn.dealii.org/trunk@31678
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heister [Fri, 15 Nov 2013 21:11:09 +0000 (21:11 +0000)]
update comment
git-svn-id: https://svn.dealii.org/trunk@31677
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heister [Fri, 15 Nov 2013 21:10:16 +0000 (21:10 +0000)]
fix test output
git-svn-id: https://svn.dealii.org/trunk@31676
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heister [Fri, 15 Nov 2013 21:10:02 +0000 (21:10 +0000)]
assert that we have a enough fe components in compute_no_normal_flux_constraints
git-svn-id: https://svn.dealii.org/trunk@31675
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heister [Fri, 15 Nov 2013 18:52:33 +0000 (18:52 +0000)]
add failing test for no_flux
git-svn-id: https://svn.dealii.org/trunk@31674
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maier [Fri, 15 Nov 2013 15:35:45 +0000 (15:35 +0000)]
Add PETSC_WITH_COMPLEX to Config.sample
git-svn-id: https://svn.dealii.org/trunk@31673
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maier [Fri, 15 Nov 2013 15:31:05 +0000 (15:31 +0000)]
Testsuite: Fix the issue with binary outputs and data_out_base_dx
git-svn-id: https://svn.dealii.org/trunk@31672
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bangerth [Fri, 15 Nov 2013 15:23:01 +0000 (15:23 +0000)]
Split a function in hopes to alleviate linker errors with ICC.
git-svn-id: https://svn.dealii.org/trunk@31671
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maier [Fri, 15 Nov 2013 14:30:09 +0000 (14:30 +0000)]
Testsuite: Also accept numerical values that have a relative error of less than 1.e-8 (but an absolute error of more than 1.e-6)
git-svn-id: https://svn.dealii.org/trunk@31670
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maier [Thu, 14 Nov 2013 23:29:32 +0000 (23:29 +0000)]
CMake: Bugfix: Do not use >/dev/null on native Windows targets
git-svn-id: https://svn.dealii.org/trunk@31669
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maier [Thu, 14 Nov 2013 23:29:29 +0000 (23:29 +0000)]
CMake: Remove debug output
git-svn-id: https://svn.dealii.org/trunk@31668
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bangerth [Thu, 14 Nov 2013 23:17:10 +0000 (23:17 +0000)]
Replace the expensive computation of a set intersection with the cheap computation whether two sets have a nonempty intersection at all. We don't need the intersection anyway.
git-svn-id: https://svn.dealii.org/trunk@31667
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maier [Thu, 14 Nov 2013 22:20:28 +0000 (22:20 +0000)]
CMake: Print TEST_DIR during configuration so that one actually has a clue which TEST_DIR was processed
git-svn-id: https://svn.dealii.org/trunk@31666
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kanschat [Thu, 14 Nov 2013 22:19:53 +0000 (22:19 +0000)]
fixed output
git-svn-id: https://svn.dealii.org/trunk@31665
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kanschat [Thu, 14 Nov 2013 22:10:37 +0000 (22:10 +0000)]
add missing initialization
git-svn-id: https://svn.dealii.org/trunk@31664
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bangerth [Thu, 14 Nov 2013 21:40:04 +0000 (21:40 +0000)]
Adjust the output of some tests so that we get below the threshold of numdiff.
git-svn-id: https://svn.dealii.org/trunk@31663
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bangerth [Thu, 14 Nov 2013 21:38:59 +0000 (21:38 +0000)]
Initialize a variable to avoid a testsuite failure with ICC 14.
git-svn-id: https://svn.dealii.org/trunk@31662
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bangerth [Thu, 14 Nov 2013 20:38:31 +0000 (20:38 +0000)]
Avoid instantiating FE_FaceQ and FE_FaceP in 1d.
git-svn-id: https://svn.dealii.org/trunk@31661
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bangerth [Thu, 14 Nov 2013 20:29:27 +0000 (20:29 +0000)]
Match function instantiation to the original declaration in hopes to
make ICC 14 happy. Unfortunately, this is not the case.
git-svn-id: https://svn.dealii.org/trunk@31660
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bangerth [Thu, 14 Nov 2013 20:23:07 +0000 (20:23 +0000)]
Provide a missing template instantiation.
git-svn-id: https://svn.dealii.org/trunk@31659
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bangerth [Thu, 14 Nov 2013 20:06:27 +0000 (20:06 +0000)]
Augment an exception message. This doesn't solve the problem, but it
gets us closer to it...
git-svn-id: https://svn.dealii.org/trunk@31658
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young [Thu, 14 Nov 2013 14:16:32 +0000 (14:16 +0000)]
Add a harmless macro PETSC_WITH_COMPLEX.
git-svn-id: https://svn.dealii.org/trunk@31653
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young [Thu, 14 Nov 2013 14:15:16 +0000 (14:15 +0000)]
Put in a missing word that was bugging me...
git-svn-id: https://svn.dealii.org/trunk@31652
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young [Thu, 14 Nov 2013 13:38:11 +0000 (13:38 +0000)]
Add a reasonable (unfinished) petsc test.
git-svn-id: https://svn.dealii.org/trunk@31651
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young [Thu, 14 Nov 2013 13:37:28 +0000 (13:37 +0000)]
Add requested output to slepc quicktest.
git-svn-id: https://svn.dealii.org/trunk@31650
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bangerth [Thu, 14 Nov 2013 13:02:26 +0000 (13:02 +0000)]
No need to say
class.template function ()
when no explicit template arguments are provided.
git-svn-id: https://svn.dealii.org/trunk@31649
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maier [Thu, 14 Nov 2013 10:21:34 +0000 (10:21 +0000)]
Provide some more information about auxiliary compiler in detailed.log
git-svn-id: https://svn.dealii.org/trunk@31648
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bangerth [Thu, 14 Nov 2013 02:07:50 +0000 (02:07 +0000)]
Fix compile error with new default constructor of CellData.
git-svn-id: https://svn.dealii.org/trunk@31647
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maier [Thu, 14 Nov 2013 01:58:07 +0000 (01:58 +0000)]
CMake: Bugfix, do not use removed macro
git-svn-id: https://svn.dealii.org/trunk@31646
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maier [Wed, 13 Nov 2013 23:54:04 +0000 (23:54 +0000)]
CMake: Unify naming in detailed.log
git-svn-id: https://svn.dealii.org/trunk@31645
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maier [Wed, 13 Nov 2013 23:48:05 +0000 (23:48 +0000)]
CMake: Unify registration of feature configurations and provide a central
possibility to filter configuration options in macro_register_feature.cmake
git-svn-id: https://svn.dealii.org/trunk@31644
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maier [Wed, 13 Nov 2013 22:53:32 +0000 (22:53 +0000)]
Bugfix: Filter out spurious "FALSE" in (BLAS|LAPACK)_LIBRARIES
git-svn-id: https://svn.dealii.org/trunk@31643
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maier [Wed, 13 Nov 2013 17:27:33 +0000 (17:27 +0000)]
Add a configure check for a regression with icc-14.0.0 and libstdc++-4.7 in C++11 mode
git-svn-id: https://svn.dealii.org/trunk@31642
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bangerth [Wed, 13 Nov 2013 16:40:04 +0000 (16:40 +0000)]
Provide default constructor for CellData to fix testsuite failures with Intel ICC 14.
git-svn-id: https://svn.dealii.org/trunk@31641
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heister [Wed, 13 Nov 2013 14:12:24 +0000 (14:12 +0000)]
try again to fix test
git-svn-id: https://svn.dealii.org/trunk@31640
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heister [Wed, 13 Nov 2013 13:03:31 +0000 (13:03 +0000)]
fix test
git-svn-id: https://svn.dealii.org/trunk@31638
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bangerth [Wed, 13 Nov 2013 12:31:26 +0000 (12:31 +0000)]
Add a note.
git-svn-id: https://svn.dealii.org/trunk@31637
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heister [Tue, 12 Nov 2013 16:06:11 +0000 (16:06 +0000)]
simplify test find_cell_10
git-svn-id: https://svn.dealii.org/trunk@31636
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turcksin [Tue, 12 Nov 2013 15:16:02 +0000 (15:16 +0000)]
Fix a bug in WorkStream when using graph coloring.
git-svn-id: https://svn.dealii.org/trunk@31635
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heister [Tue, 12 Nov 2013 14:59:57 +0000 (14:59 +0000)]
simplify test
git-svn-id: https://svn.dealii.org/trunk@31634
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young [Tue, 12 Nov 2013 14:26:18 +0000 (14:26 +0000)]
Wolfgang's patch for thread management (use pointer to).
git-svn-id: https://svn.dealii.org/trunk@31633
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kanschat [Tue, 12 Nov 2013 12:56:29 +0000 (12:56 +0000)]
try to keep SparseMatrix in module
git-svn-id: https://svn.dealii.org/trunk@31632
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heister [Mon, 11 Nov 2013 23:27:32 +0000 (23:27 +0000)]
fix 2 tests
git-svn-id: https://svn.dealii.org/trunk@31631
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turcksin [Mon, 11 Nov 2013 20:55:54 +0000 (20:55 +0000)]
Fix a bug in WorkStream for disconnected graph.
git-svn-id: https://svn.dealii.org/trunk@31630
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heister [Mon, 11 Nov 2013 18:27:45 +0000 (18:27 +0000)]
tests: use deal.II constant for PI, might fix tests on cygwin
git-svn-id: https://svn.dealii.org/trunk@31629
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maier [Mon, 11 Nov 2013 16:17:31 +0000 (16:17 +0000)]
Reorganize the licensing stuff a bit. Add some last license headers and pointers
git-svn-id: https://svn.dealii.org/trunk@31628
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maier [Mon, 11 Nov 2013 15:57:46 +0000 (15:57 +0000)]
Remove file doxygen.sty from the doc directory - it is ancient can be generated on the fly by modern doxygen
git-svn-id: https://svn.dealii.org/trunk@31627
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maier [Mon, 11 Nov 2013 15:51:49 +0000 (15:51 +0000)]
Move reports over to the homepage
git-svn-id: https://svn.dealii.org/trunk@31626
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kanschat [Mon, 11 Nov 2013 12:06:35 +0000 (12:06 +0000)]
revert UML
git-svn-id: https://svn.dealii.org/trunk@31619
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young [Mon, 11 Nov 2013 10:21:02 +0000 (10:21 +0000)]
Use deal.II style on previous patch.
git-svn-id: https://svn.dealii.org/trunk@31618
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young [Mon, 11 Nov 2013 10:19:52 +0000 (10:19 +0000)]
Link to header stdlib.h on FreeBSD.
git-svn-id: https://svn.dealii.org/trunk@31617
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maier [Mon, 11 Nov 2013 09:06:30 +0000 (09:06 +0000)]
Revert "Revert 29343 again, for the same reason as before." which itself reverted the revert of [...]
git-svn-id: https://svn.dealii.org/trunk@31616
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bangerth [Mon, 11 Nov 2013 01:03:17 +0000 (01:03 +0000)]
Provide documentation.
git-svn-id: https://svn.dealii.org/trunk@31615
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bangerth [Mon, 11 Nov 2013 00:43:42 +0000 (00:43 +0000)]
Add another test.
git-svn-id: https://svn.dealii.org/trunk@31614
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bangerth [Sun, 10 Nov 2013 23:01:32 +0000 (23:01 +0000)]
Adjust a few miscompilations.
git-svn-id: https://svn.dealii.org/trunk@31613
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bangerth [Sun, 10 Nov 2013 22:55:30 +0000 (22:55 +0000)]
Adjust output file again for testing machine.
git-svn-id: https://svn.dealii.org/trunk@31612
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pelteret [Sun, 10 Nov 2013 22:17:05 +0000 (22:17 +0000)]
Updated Mesh conversion documentation to reflect licencing of example mesh files
git-svn-id: https://svn.dealii.org/trunk@31611
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bangerth [Sun, 10 Nov 2013 18:26:00 +0000 (18:26 +0000)]
Remove postscript version of reports. This is so 1990s!
git-svn-id: https://svn.dealii.org/trunk@31610
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bangerth [Sun, 10 Nov 2013 18:20:01 +0000 (18:20 +0000)]
Shrink the file by only including options that we really care about and
removing the commentary from the doxygen authors. This should address
copyright concerns for the file.
Removing variables we don't care about also helps make this file more future
proof since we no longer include variables that later versions of doxygen may
deprecate or remove.
git-svn-id: https://svn.dealii.org/trunk@31609
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bangerth [Sun, 10 Nov 2013 17:20:37 +0000 (17:20 +0000)]
Use a different form of instantiation in an attempt to work around something that may be a bug in ICC.
git-svn-id: https://svn.dealii.org/trunk@31608
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bangerth [Sun, 10 Nov 2013 17:11:17 +0000 (17:11 +0000)]
Nothing should be built in this directory any more these days, so remove svn:ignore.
git-svn-id: https://svn.dealii.org/trunk@31607
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bangerth [Sun, 10 Nov 2013 17:06:08 +0000 (17:06 +0000)]
Remove svn:executable from mesh files.
git-svn-id: https://svn.dealii.org/trunk@31606
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bangerth [Sun, 10 Nov 2013 15:28:26 +0000 (15:28 +0000)]
Convert some of the VectorOperation::add into VectorOperation::insert as appropriate.
git-svn-id: https://svn.dealii.org/trunk@31605
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maier [Sun, 10 Nov 2013 09:26:32 +0000 (09:26 +0000)]
Revert "Also instantiate DataOutStack for 3D"
git-svn-id: https://svn.dealii.org/trunk@31604
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maier [Sat, 9 Nov 2013 22:56:29 +0000 (22:56 +0000)]
Also instantiate DataOutStack for 3D
git-svn-id: https://svn.dealii.org/trunk@31603
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young [Sat, 9 Nov 2013 15:38:36 +0000 (15:38 +0000)]
Explicitly compress petsc objects with a VectorOperation.
git-svn-id: https://svn.dealii.org/trunk@31602
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bangerth [Sat, 9 Nov 2013 14:00:15 +0000 (14:00 +0000)]
Adjust accuracy so that numdiff can do its work.
git-svn-id: https://svn.dealii.org/trunk@31601
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maier [Sat, 9 Nov 2013 08:52:48 +0000 (08:52 +0000)]
Bugfix: Let setup_tests and tests depend on a compiled library again...
git-svn-id: https://svn.dealii.org/trunk@31600
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heister [Sat, 9 Nov 2013 02:29:29 +0000 (02:29 +0000)]
fix warning
git-svn-id: https://svn.dealii.org/trunk@31599
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bangerth [Fri, 8 Nov 2013 23:53:04 +0000 (23:53 +0000)]
Try to improve one issue where compilers typically can't quite resolve a function overload.
git-svn-id: https://svn.dealii.org/trunk@31598
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bangerth [Fri, 8 Nov 2013 23:20:11 +0000 (23:20 +0000)]
Reindent the whole file.
git-svn-id: https://svn.dealii.org/trunk@31597
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bangerth [Fri, 8 Nov 2013 23:18:09 +0000 (23:18 +0000)]
Add several more tests.
git-svn-id: https://svn.dealii.org/trunk@31596
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bangerth [Fri, 8 Nov 2013 23:17:44 +0000 (23:17 +0000)]
Reimplement the third option for WorkStream, using the colored graph.
git-svn-id: https://svn.dealii.org/trunk@31595
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heister [Fri, 8 Nov 2013 21:31:09 +0000 (21:31 +0000)]
try to detect hdf5 64bit mode
git-svn-id: https://svn.dealii.org/trunk@31594
0785d39b -7218-0410-832d-
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frohne [Fri, 8 Nov 2013 16:47:28 +0000 (16:47 +0000)]
fix bug for damping
git-svn-id: https://svn.dealii.org/trunk@31592
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 15:11:41 +0000 (15:11 +0000)]
get rid of some warnings
git-svn-id: https://svn.dealii.org/trunk@31591
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 14:21:32 +0000 (14:21 +0000)]
fix abandoning threads. Instead of keeping ThreadDescriptor alive using a shared_ptr to self, we just detach() from the c++ thread when destructed.
git-svn-id: https://svn.dealii.org/trunk@31590
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 14:06:30 +0000 (14:06 +0000)]
mark spinlock variables in tests volatile for release mode
git-svn-id: https://svn.dealii.org/trunk@31589
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 13:25:28 +0000 (13:25 +0000)]
make multigrid test succeed by switching from CG to GMRES. I have no idea if the problem should be SPD and if CG should work, though.
git-svn-id: https://svn.dealii.org/trunk@31588
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 13:09:36 +0000 (13:09 +0000)]
fix data type
git-svn-id: https://svn.dealii.org/trunk@31587
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 12:56:31 +0000 (12:56 +0000)]
fix dead links, add some references to cmake documentation
git-svn-id: https://svn.dealii.org/trunk@31586
0785d39b -7218-0410-832d-
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heister [Fri, 8 Nov 2013 12:50:56 +0000 (12:50 +0000)]
mention 'make test'
git-svn-id: https://svn.dealii.org/trunk@31585
0785d39b -7218-0410-832d-
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bangerth [Fri, 8 Nov 2013 05:08:26 +0000 (05:08 +0000)]
Remove a TODO that has been taken care of.
git-svn-id: https://svn.dealii.org/trunk@31584
0785d39b -7218-0410-832d-
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bangerth [Fri, 8 Nov 2013 05:06:55 +0000 (05:06 +0000)]
Add a few tests.
git-svn-id: https://svn.dealii.org/trunk@31583
0785d39b -7218-0410-832d-
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