https://gitweb.dealii.org/ - dealii-svn.git/log

]> https://gitweb.dealii.org/ - dealii-svn.git/log

kronbichler [Wed, 16 Oct 2013 14:43:54 +0000 (14:43 +0000)]

Add update_ghost_values and compress to parallel block vector for a consistent interface with the parallel non-block vector.

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kronbichler [Wed, 16 Oct 2013 14:43:14 +0000 (14:43 +0000)]

Adjust comments

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kronbichler [Wed, 16 Oct 2013 14:41:36 +0000 (14:41 +0000)]

Delete stray 'of'

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bangerth [Wed, 16 Oct 2013 02:41:43 +0000 (02:41 +0000)]

Avoid 'typename' outside templates.

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turcksin [Wed, 16 Oct 2013 00:06:34 +0000 (00:06 +0000)]

Replace Threads with WorkStream in step-9. Documentation still needs to be updated.

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turcksin [Tue, 15 Oct 2013 20:28:36 +0000 (20:28 +0000)]

Modify data_out.cc to copy the patches in parrallel.

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turcksin [Tue, 15 Oct 2013 17:34:45 +0000 (17:34 +0000)]

Replace distance by using SynchronousIterators in derivative_approximation.

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bangerth [Mon, 14 Oct 2013 22:16:49 +0000 (22:16 +0000)]

Remove debug output accidentally committed in r31180.

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turcksin [Mon, 14 Oct 2013 21:37:39 +0000 (21:37 +0000)]

Replace the second Threads by WorkStream in matrix_tools.cc

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bangerth [Mon, 14 Oct 2013 20:56:11 +0000 (20:56 +0000)]

Fix typo.

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turcksin [Mon, 14 Oct 2013 19:19:08 +0000 (19:19 +0000)]

Replace the first Threads by WorkStream in matrix_tools.cc

git-svn-id: https://svn.dealii.org/trunk@31230 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 14 Oct 2013 13:23:43 +0000 (13:23 +0000)]

Add a comment.

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bangerth [Mon, 14 Oct 2013 12:19:27 +0000 (12:19 +0000)]

Clarify a couple of items.

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bangerth [Mon, 14 Oct 2013 12:01:09 +0000 (12:01 +0000)]

Disable output to console.

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bangerth [Mon, 14 Oct 2013 11:57:31 +0000 (11:57 +0000)]

Disable warning #135 on intel compilers.

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kronbichler [Sun, 13 Oct 2013 10:01:42 +0000 (10:01 +0000)]

Announce tutorial program also on news page

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bangerth [Fri, 11 Oct 2013 14:22:21 +0000 (14:22 +0000)]

Add an instantiation.

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bangerth [Fri, 11 Oct 2013 13:25:08 +0000 (13:25 +0000)]

Help some compilers (notably xlC) with name lookup.

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bangerth [Fri, 11 Oct 2013 13:02:00 +0000 (13:02 +0000)]

Rewire the reading of the obstacle: either say 'sphere' or 'read from file'.

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bangerth [Fri, 11 Oct 2013 12:50:31 +0000 (12:50 +0000)]

Minor cleanup of parameter declaration. Remove the option 'refinement strategy = fixed dofs' from the parameters since it wasn't actually implemented.

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turcksin [Thu, 10 Oct 2013 16:56:19 +0000 (16:56 +0000)]

Use WorkStream instead of Thread in DerivativeApproximation::approximate_derivative.

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turcksin [Wed, 9 Oct 2013 21:34:07 +0000 (21:34 +0000)]

Replace Threads by WorkStream in dof_tools_constraints.cc

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maier [Wed, 9 Oct 2013 11:58:13 +0000 (11:58 +0000)]

Doc: Introduce two more links and regroup "Home" in the navbar

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heister [Tue, 8 Oct 2013 20:02:32 +0000 (20:02 +0000)]

take over r31179 to mainline

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bangerth [Tue, 8 Oct 2013 19:47:03 +0000 (19:47 +0000)]

Remove outdated svn:ignore.

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bangerth [Tue, 8 Oct 2013 19:46:27 +0000 (19:46 +0000)]

Rework.

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bangerth [Tue, 8 Oct 2013 19:37:45 +0000 (19:37 +0000)]

Link to appropriate tag files.

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bangerth [Tue, 8 Oct 2013 19:36:00 +0000 (19:36 +0000)]

Slightly reword top note.

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bangerth [Tue, 8 Oct 2013 19:34:27 +0000 (19:34 +0000)]

Rework.

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bangerth [Tue, 8 Oct 2013 19:03:30 +0000 (19:03 +0000)]

Update some of the information at the bottom. The link to DEAL no
longer works, so delete it.

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bangerth [Tue, 8 Oct 2013 14:18:30 +0000 (14:18 +0000)]

Improve error message.

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bangerth [Tue, 8 Oct 2013 12:41:27 +0000 (12:41 +0000)]

Run second part of test only if it's different from the first. Adjust test output.

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bangerth [Tue, 8 Oct 2013 00:17:45 +0000 (00:17 +0000)]

Implement bilinear interpolation in a much faster way.

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bangerth [Mon, 7 Oct 2013 23:52:01 +0000 (23:52 +0000)]

No longer output the residual to output files.

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bangerth [Mon, 7 Oct 2013 23:50:20 +0000 (23:50 +0000)]

Compute locally owned active set as intersection of two sets.

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heister [Mon, 7 Oct 2013 21:55:54 +0000 (21:55 +0000)]

enhance SparseMatrix documentation

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bangerth [Mon, 7 Oct 2013 14:51:55 +0000 (14:51 +0000)]

Minor adjustments.

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bangerth [Mon, 7 Oct 2013 13:43:08 +0000 (13:43 +0000)]

Patch by Mayank Subharwal and Andreas Putz: Make GridIn read VTK files as well.

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bangerth [Mon, 7 Oct 2013 13:28:39 +0000 (13:28 +0000)]

Search first for the file with its complete given name. I.e., if someone
searches for <mesh.vtk> with additional suffix <.vtk>, then still find the
file if it exists before trying <mesh.vtk.vtk>.

git-svn-id: https://svn.dealii.org/trunk@31162 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 7 Oct 2013 03:42:41 +0000 (03:42 +0000)]

Rewrite in parts.

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bangerth [Mon, 7 Oct 2013 03:08:28 +0000 (03:08 +0000)]

Remove extraneous space.

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bangerth [Mon, 7 Oct 2013 02:54:40 +0000 (02:54 +0000)]

Link in step-42.

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bangerth [Mon, 7 Oct 2013 02:42:34 +0000 (02:42 +0000)]

Update svn:ignore.

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bangerth [Mon, 7 Oct 2013 02:35:51 +0000 (02:35 +0000)]

Finish documenting.

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bangerth [Sun, 6 Oct 2013 21:03:56 +0000 (21:03 +0000)]

Comment on solve_newton().

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bangerth [Sun, 6 Oct 2013 18:21:36 +0000 (18:21 +0000)]

Fix a bug introduced in the previous version.

git-svn-id: https://svn.dealii.org/trunk@31152 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Sat, 5 Oct 2013 16:08:10 +0000 (16:08 +0000)]

Switch Assert to AssertThrow where a PETScInternalError can occur.

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bangerth [Sat, 5 Oct 2013 12:17:40 +0000 (12:17 +0000)]

Move forward.

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kanschat [Sat, 5 Oct 2013 11:48:41 +0000 (11:48 +0000)]

add Stephan's paper

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bangerth [Sat, 5 Oct 2013 11:32:20 +0000 (11:32 +0000)]

Indent.

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young [Sat, 5 Oct 2013 03:52:30 +0000 (03:52 +0000)]

Add a strangely missing AssertThrow.

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bangerth [Fri, 4 Oct 2013 23:04:52 +0000 (23:04 +0000)]

Last changes for the day. Good progress :-)

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bangerth [Fri, 4 Oct 2013 22:32:36 +0000 (22:32 +0000)]

More documentation.

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bangerth [Fri, 4 Oct 2013 21:33:36 +0000 (21:33 +0000)]

More documentation.

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bangerth [Fri, 4 Oct 2013 19:58:21 +0000 (19:58 +0000)]

Make run again in parallel.

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bangerth [Fri, 4 Oct 2013 19:32:41 +0000 (19:32 +0000)]

Remove unused variables.

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bangerth [Fri, 4 Oct 2013 13:05:10 +0000 (13:05 +0000)]

Some compilers apparently want to have a full declaration of ConstraintMatrix
if they see it in a default argument.

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bangerth [Fri, 4 Oct 2013 13:03:44 +0000 (13:03 +0000)]

Qualify strcpy with std::

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kronbichler [Fri, 4 Oct 2013 07:29:31 +0000 (07:29 +0000)]

Improve exception messages

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maier [Thu, 3 Oct 2013 23:19:13 +0000 (23:19 +0000)]

Bugfix

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maier [Thu, 3 Oct 2013 23:17:06 +0000 (23:17 +0000)]

Bugfix: resolve issue 105

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bangerth [Thu, 3 Oct 2013 20:39:51 +0000 (20:39 +0000)]

Rename a few variables. Initialize vectors with vector sets and communicators, rather than other vectors, to make clear that the vector is not in fact copied, and to make it clearer what index set is being used.

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bangerth [Thu, 3 Oct 2013 20:08:21 +0000 (20:08 +0000)]

Remove file accidentally added.

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bangerth [Thu, 3 Oct 2013 20:07:55 +0000 (20:07 +0000)]

Remove one variable whose value is always equal to another.

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bangerth [Thu, 3 Oct 2013 20:00:34 +0000 (20:00 +0000)]

Remove one variable whose value is always equal to another.

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young [Thu, 3 Oct 2013 17:47:32 +0000 (17:47 +0000)]

do a todo - use PetscReal where real_type is needed.

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young [Thu, 3 Oct 2013 13:38:48 +0000 (13:38 +0000)]

Set default problem type for SLEPc - this should be the GNHEP.

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heister [Wed, 2 Oct 2013 18:25:01 +0000 (18:25 +0000)]

add to changelog

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heister [Wed, 2 Oct 2013 17:59:44 +0000 (17:59 +0000)]

do not use n_default_threads but n_threads()

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heister [Wed, 2 Oct 2013 17:52:30 +0000 (17:52 +0000)]

replace n_default_threads by n_threads()

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heister [Wed, 2 Oct 2013 17:51:27 +0000 (17:51 +0000)]

leave some comments and todos

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heister [Wed, 2 Oct 2013 17:40:44 +0000 (17:40 +0000)]

do not use n_default_threads

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heister [Wed, 2 Oct 2013 17:40:15 +0000 (17:40 +0000)]

introduce new n_threads(), deprecate n_default_threads

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heister [Wed, 2 Oct 2013 17:35:40 +0000 (17:35 +0000)]

remove references to n_default_threads() in error_estimator.h that are ignored anyway.

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heister [Wed, 2 Oct 2013 17:30:01 +0000 (17:30 +0000)]

only use TBB in workstream if we are allowed to use more than one thread

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turcksin [Wed, 2 Oct 2013 17:00:47 +0000 (17:00 +0000)]

Now when WorkStream uses graph coloring and that there are not enough elements in a color, the elements are aggregated and copied serially.

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bangerth [Wed, 2 Oct 2013 15:06:52 +0000 (15:06 +0000)]

Make it compile.

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bangerth [Wed, 2 Oct 2013 15:03:54 +0000 (15:03 +0000)]

Slightly more documentation. Leave a few TODOs in the introduction.

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maier [Wed, 2 Oct 2013 00:47:35 +0000 (00:47 +0000)]

Cherry-pick revisions 31065 and 31066 from branch_port_the_testsuite

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maier [Tue, 1 Oct 2013 21:35:48 +0000 (21:35 +0000)]

Port the distributed periodicity test, add missing template instantiation

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maier [Tue, 1 Oct 2013 21:35:47 +0000 (21:35 +0000)]

Port grid_tools_05.cc test to collect_periodic_faces

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bangerth [Tue, 1 Oct 2013 20:36:19 +0000 (20:36 +0000)]

Suppress warnings of the following kind:
..................
/.../deal.II/source/numerics/matrix_tools.cc(2088): warning #2536: type qualifiers are meaningless here

bool (*comp)(const typename SparseMatrix<number>::iterator::value_type p,
^
..................
Avoiding the 'const' here is not always completely possible in
template contexts, depending on whether 'value_type' already
has the 'const' in it or not.

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bangerth [Tue, 1 Oct 2013 18:49:50 +0000 (18:49 +0000)]

Improve error message.

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turcksin [Tue, 1 Oct 2013 17:12:43 +0000 (17:12 +0000)]

Fix a bug in graph coloring and add a test for it.

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kronbichler [Tue, 1 Oct 2013 15:18:37 +0000 (15:18 +0000)]

Link in step-51 tutorial program.

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bangerth [Tue, 1 Oct 2013 00:25:23 +0000 (00:25 +0000)]

Do some operations in parallel on tasks.

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bangerth [Tue, 1 Oct 2013 00:24:55 +0000 (00:24 +0000)]

Work around an issue in a copy constructor we needed for C++11 compatibility and Intel's ICC.

git-svn-id: https://svn.dealii.org/trunk@31054 0785d39b-7218-0410-832d-ea1e28bc413d

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maier [Mon, 30 Sep 2013 23:49:41 +0000 (23:49 +0000)]

Take over revisions 31045 - 31051 from branch_port_the_testsuite

Cleanup GridTools::collect_periodic_*:

- Remove GridTools::collect_periodic_face_pairs
- Unify interface for remaining GridTools::collect_periodic_faces
- Remove deprecated functions that aren't even released
- Bugfix: Instantiate collect_periodic_faces, this resolves a compilation
issue with icc

git-svn-id: https://svn.dealii.org/trunk@31052 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 22:40:01 +0000 (22:40 +0000)]

Fix a couple of assertions.

git-svn-id: https://svn.dealii.org/trunk@31047 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 18:40:42 +0000 (18:40 +0000)]

Disable warning 327 for Intel compilers. This leads to (correct)
warnings of the kind

File: source/fe/fe_values.cc Line: 430

/.../deal.II/source/fe/fe_values.cc(430): warning #327: NULL reference is not allowed

      fe_values(*static_cast<dealii::FEValuesBase<dim, spacedim>*> (0)),
                ^
          detected during instantiation of "dealii::FEValuesViews::Tensor<2, dim, spacedim>::Tensor() [with dim=1, spacedim=1]" at line 76 of "/usr/include/c++/4.6/bits/stl_construct.h"

But we'd like to use this construct anyway.

git-svn-id: https://svn.dealii.org/trunk@31043 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 15:45:54 +0000 (15:45 +0000)]

Provide a copy constructor.

git-svn-id: https://svn.dealii.org/trunk@31041 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 14:36:13 +0000 (14:36 +0000)]

Leave a TODO.

git-svn-id: https://svn.dealii.org/trunk@31037 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 14:15:20 +0000 (14:15 +0000)]

Add a copy constructor in hopes of making Intel's ICC happy.

git-svn-id: https://svn.dealii.org/trunk@31036 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:38:56 +0000 (13:38 +0000)]

Suppress output to console.

git-svn-id: https://svn.dealii.org/trunk@31033 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:36:31 +0000 (13:36 +0000)]

Move declaration of std::vector out of a loop.

git-svn-id: https://svn.dealii.org/trunk@31032 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:32:52 +0000 (13:32 +0000)]

Try to make older gccs happy.

git-svn-id: https://svn.dealii.org/trunk@31030 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:26:55 +0000 (13:26 +0000)]

Provide a copy constructor for the Task class. This should make
Intel ICC happy.

git-svn-id: https://svn.dealii.org/trunk@31029 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:26:36 +0000 (13:26 +0000)]

Provide a copy constructor for the accessor class. This should make
Intel ICC happy.

git-svn-id: https://svn.dealii.org/trunk@31028 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 13:16:11 +0000 (13:16 +0000)]

Move comment into the right place.

git-svn-id: https://svn.dealii.org/trunk@31027 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 30 Sep 2013 03:52:45 +0000 (03:52 +0000)]

Document geometry generation.

git-svn-id: https://svn.dealii.org/trunk@31025 0785d39b-7218-0410-832d-ea1e28bc413d

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