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https://gitweb.dealii.org/ - dealii.git/log
Timo Heister [Tue, 31 May 2022 19:53:58 +0000 (15:53 -0400)]
add large vtu test
A a test that writes a .vtu file with parallel IO that is larger than
4GB.
David Wells [Sat, 28 May 2022 14:00:53 +0000 (10:00 -0400)]
Merge pull request #13845 from marcfehling/occ-gte
Introduce DEAL_II_OPENCASCADE_VERSION_GTE
David Wells [Sat, 28 May 2022 13:59:12 +0000 (09:59 -0400)]
Merge pull request #13836 from tjhei/doxygen-format-1
some doxygen formatting fixes
Martin Kronbichler [Sat, 28 May 2022 07:11:34 +0000 (09:11 +0200)]
Merge pull request #13844 from drwells/no-muparser-warning
Suppress some unused variable warnings when we don't have muParser.
Martin Kronbichler [Sat, 28 May 2022 07:06:05 +0000 (09:06 +0200)]
Merge pull request #13838 from marcfehling/fix-intel18
Intel 18: static constexpr bool
Martin Kronbichler [Sat, 28 May 2022 07:04:58 +0000 (09:04 +0200)]
Merge pull request #13843 from peterrum/FESystem_initialize
Fix FESystem::initialize for pyramids/wedges
Martin Kronbichler [Sat, 28 May 2022 07:04:26 +0000 (09:04 +0200)]
Merge pull request #13840 from marcfehling/fix-trilinos
Fix test output for trilinos 13.2.0
Marc Fehling [Sat, 28 May 2022 01:15:44 +0000 (19:15 -0600)]
Introduce DEAL_II_OPENCASCADE_VERSION_GTE
David Wells [Fri, 27 May 2022 23:58:01 +0000 (19:58 -0400)]
Merge pull request #13839 from marcfehling/petsc_solver_08
Fix petsc/solver_08 for petsc 3.17.1
David Wells [Fri, 27 May 2022 23:54:23 +0000 (19:54 -0400)]
Merge pull request #13841 from marcfehling/fix-intel-pipejunction
Intel 18: more constexpr problems
David Wells [Fri, 27 May 2022 23:50:07 +0000 (19:50 -0400)]
Suppress some unused variable warnings when we don't have muParser.
Timo Heister [Fri, 27 May 2022 15:47:18 +0000 (11:47 -0400)]
some doxygen formatting fixes
- consistent indentation of comments
- put @ref on separate line
- some minor fixes
(this is done with wrapcomments.py and checking things manually)
Peter Munch [Fri, 27 May 2022 21:13:49 +0000 (23:13 +0200)]
Fix FESystem::initialize for pyramids/wedges
Marc Fehling [Fri, 27 May 2022 20:04:27 +0000 (14:04 -0600)]
Fix test output for trilinos 13.2.0
Marc Fehling [Fri, 27 May 2022 19:20:49 +0000 (13:20 -0600)]
Fix petsc/solver_08 for petsc 3.17.1
Marc Fehling [Fri, 27 May 2022 19:00:00 +0000 (13:00 -0600)]
Intel 18: more constexpr problems
Peter Munch [Fri, 27 May 2022 18:58:18 +0000 (20:58 +0200)]
Merge pull request #13834 from peterrum/multiply_dof_numbers
Generalize FETools::Compositing::multiply_dof_numbers()
Marc Fehling [Fri, 27 May 2022 16:49:42 +0000 (10:49 -0600)]
Intel 18: static constexpr bool
Peter Munch [Fri, 27 May 2022 10:21:03 +0000 (12:21 +0200)]
Generalize FETools::Compositing::multiply_dof_numbers()
David Wells [Fri, 27 May 2022 11:58:15 +0000 (07:58 -0400)]
Merge pull request #13833 from kronbichler/deprecate_cell_data_transfer_buffer
Deprecate GridTools::CellDataTransferBuffer
Martin Kronbichler [Fri, 27 May 2022 07:02:53 +0000 (09:02 +0200)]
Merge pull request #13805 from drwells/fix-test-dependencies
Fix test dependencies
Martin Kronbichler [Thu, 26 May 2022 21:00:38 +0000 (23:00 +0200)]
Move function definitions inline to fix compiler warnings
David Wells [Tue, 24 May 2022 17:49:57 +0000 (13:49 -0400)]
Mark a test that depends on UMFPACK as such.
David Wells [Tue, 24 May 2022 17:44:16 +0000 (13:44 -0400)]
Mark some tests as depending on LAPACK.
While we're at it - throw an exception if we don't have LAPACK in the
class that uses it.
David Wells [Tue, 24 May 2022 17:36:04 +0000 (13:36 -0400)]
Add a missing header in the non-zlib case.
This is not in utilities.h if zlib is not enabled, but we want to try
and catch that exception either way.
David Wells [Tue, 24 May 2022 17:35:33 +0000 (13:35 -0400)]
Mark tests that depend on complex numbers as such.
David Wells [Fri, 20 May 2022 18:09:35 +0000 (14:09 -0400)]
Add test output for the non-zlib case.
Daniel Arndt [Fri, 27 May 2022 03:14:48 +0000 (23:14 -0400)]
Merge pull request #13773 from drwells/refactor-function-parser
David Wells [Fri, 27 May 2022 02:23:53 +0000 (22:23 -0400)]
Merge pull request #13826 from bangerth/ca-specialization
Consensus algorithm specialization for the case where no answer is requested.
David Wells [Thu, 26 May 2022 19:44:37 +0000 (15:44 -0400)]
Merge pull request #13832 from bangerth/changelog
Minor updates to a few changelog entries.
Wolfgang Bangerth [Wed, 25 May 2022 22:58:04 +0000 (16:58 -0600)]
Use CA specializations in places where we don't expect an answer.
Wolfgang Bangerth [Wed, 25 May 2022 22:34:14 +0000 (16:34 -0600)]
Provide some-to-some specializations to the Consensus Algorithms functions.
Martin Kronbichler [Thu, 26 May 2022 18:24:22 +0000 (20:24 +0200)]
Merge pull request #13823 from tamiko/unify_configure_file_naming
CMake: Make configure file naming consistent
Martin Kronbichler [Thu, 26 May 2022 18:16:10 +0000 (20:16 +0200)]
Deprecate GridTools::CellDataTransferBuffer
David Wells [Thu, 26 May 2022 18:10:51 +0000 (14:10 -0400)]
Merge pull request #12807 from tamiko/introduce_step_81
Tutorial: Time-harmonic Maxwell solver with perfectly matched layer
Peter Munch [Thu, 26 May 2022 17:49:08 +0000 (19:49 +0200)]
Merge pull request #13824 from bangerth/ca-doc
Augment documentation of the consensus algorithm free functions.
Daniel Arndt [Thu, 26 May 2022 17:27:40 +0000 (13:27 -0400)]
Merge pull request #13830 from bangerth/doc
Better document ReferenceCell and the reference cell glossary entry.
Wolfgang Bangerth [Thu, 26 May 2022 17:16:48 +0000 (11:16 -0600)]
Minor updates to a few changelog entries.
Wolfgang Bangerth [Thu, 26 May 2022 03:22:59 +0000 (21:22 -0600)]
Better document ReferenceCell and the reference cell glossary entry.
David Wells [Thu, 26 May 2022 13:58:27 +0000 (09:58 -0400)]
Merge pull request #13829 from kronbichler/reduce_header_inclusion
Remove some unneeded header inclusions
Matthias Maier [Wed, 25 May 2022 21:40:45 +0000 (16:40 -0500)]
CMake: Make configure file naming consistent
Configure file are including and processed in alphabetical order.
However, in order to allow for feature dependencies we have to include
some configure files before others. We have solved this by numbering
some of the configure files in order to force them to be processed
before others.
This pull requests makes this numbering a bit more consistent by
- numbering _all_ of the configure files with a default number of 50,
and configure files that have to be processed earlier taking up a
number between 40 and 00.
- increasing the numbering from one digit to two digits to accomodate
a possible future need to adjust the inclusion order a bit better.
Martin Kronbichler [Thu, 26 May 2022 13:45:00 +0000 (15:45 +0200)]
Merge pull request #13827 from tamiko/skip_boost_test
CMake: Skip expensive boost test
Martin Kronbichler [Thu, 26 May 2022 13:44:48 +0000 (15:44 +0200)]
Merge pull request #13825 from bangerth/ca-decl
Fix the function declaration a doc string is attached to.
Daniel Arndt [Thu, 26 May 2022 13:34:06 +0000 (09:34 -0400)]
Merge pull request #13787 from drwells/sundials-ida-tolerance
Daniel Arndt [Thu, 26 May 2022 13:22:40 +0000 (09:22 -0400)]
Merge pull request #13831 from bangerth/rule-of-3
Provide a defaulted copy operator.
Matthias Maier [Thu, 26 May 2022 02:20:00 +0000 (21:20 -0500)]
Step-81: Make clang-tidy happy
Matthias Maier [Thu, 26 May 2022 01:52:24 +0000 (20:52 -0500)]
Step-81: Avoid using 1.0i literal when multiplying dealii::Tensor<>
Matthias Maier [Wed, 25 May 2022 17:12:44 +0000 (12:12 -0500)]
add parameter file
Matthias Maier [Tue, 24 May 2022 16:13:40 +0000 (11:13 -0500)]
Address some more review comments
Matthias Maier [Thu, 5 May 2022 17:51:37 +0000 (12:51 -0500)]
Remove debug assert
ManaswineeB [Thu, 5 May 2022 16:34:48 +0000 (11:34 -0500)]
minor typos fixed
Matthias Maier [Tue, 3 May 2022 21:09:35 +0000 (16:09 -0500)]
Step-81: make doxygen happy
Matthias Maier [Tue, 3 May 2022 21:08:02 +0000 (16:08 -0500)]
Step-81: add two references
Matthias Maier [Thu, 28 Apr 2022 22:24:35 +0000 (17:24 -0500)]
indent
Matthias Maier [Thu, 28 Apr 2022 22:07:43 +0000 (17:07 -0500)]
finish "possibilites for extension"
Matthias Maier [Thu, 28 Apr 2022 21:12:15 +0000 (16:12 -0500)]
step-81: some minor polishing
Manaswinee Bezbaruah [Tue, 29 Mar 2022 15:47:27 +0000 (10:47 -0500)]
typos fixed
David Wells [Fri, 25 Mar 2022 14:57:27 +0000 (10:57 -0400)]
Fix some typos in the source file.
David Wells [Fri, 25 Mar 2022 14:57:21 +0000 (10:57 -0400)]
Tidy up some more equations.
David Wells [Fri, 25 Mar 2022 14:46:03 +0000 (10:46 -0400)]
Improve some HTML.
David Wells [Thu, 24 Mar 2022 21:37:02 +0000 (17:37 -0400)]
Minor grammatical and typesetting improvements for step-81
Manaswinee Bezbaruah [Thu, 24 Mar 2022 18:21:56 +0000 (13:21 -0500)]
Step-81: minor polishing
Manaswinee Bezbaruah [Fri, 18 Mar 2022 16:34:39 +0000 (11:34 -0500)]
add cartoon
Manaswinee Bezbaruah [Thu, 3 Feb 2022 02:28:16 +0000 (20:28 -0600)]
Step-81: add more text to the results section
Manaswinee Bezbaruah [Thu, 27 Jan 2022 07:24:59 +0000 (01:24 -0600)]
Step-81: result section updated, minor typos fixed
Manaswinee Bezbaruah [Tue, 2 Nov 2021 04:57:28 +0000 (23:57 -0500)]
Step-81: minor typos fixes, default parameters changed
Manaswinee Bezbaruah [Sun, 31 Oct 2021 21:09:08 +0000 (16:09 -0500)]
Step-81: add some more documentation
Manaswinee Bezbaruah [Tue, 26 Oct 2021 04:20:21 +0000 (23:20 -0500)]
removed separators, added some comments
Manaswinee Bezbaruah [Mon, 11 Oct 2021 19:24:21 +0000 (14:24 -0500)]
postprocess removed and Nedelec replaced with NedelecSZ
Manaswinee Bezbaruah [Tue, 22 Jun 2021 18:26:33 +0000 (13:26 -0500)]
Step-81: Add a skeleton
This commit introduces a time-harmonic Maxwell solver example step.
Wolfgang Bangerth [Thu, 26 May 2022 03:36:14 +0000 (21:36 -0600)]
Provide a defaulted copy operator.
Wolfgang Bangerth [Thu, 26 May 2022 00:00:20 +0000 (18:00 -0600)]
Merge pull request #13512 from gfcas/constant_modes_doc
Update constant_modes doc
Martin Kronbichler [Wed, 25 May 2022 23:52:54 +0000 (01:52 +0200)]
Merge pull request #13769 from bangerth/ca-remove
Deprecate ConsensusAlgorithms::AnonymousProcess.
Martin Kronbichler [Wed, 25 May 2022 23:52:16 +0000 (01:52 +0200)]
Merge pull request #13768 from bangerth/ca-template
Consensus Algorithms: Move template functions into .h file.
Martin Kronbichler [Wed, 25 May 2022 23:43:31 +0000 (01:43 +0200)]
Remove some unneeded header inclusions
Martin Kronbichler [Wed, 25 May 2022 23:28:40 +0000 (01:28 +0200)]
Merge pull request #13818 from tamiko/doxygen_quoting_issues
Step-40: Remove an unmatched single quote
Wolfgang Bangerth [Wed, 25 May 2022 23:23:51 +0000 (17:23 -0600)]
Merge pull request #13815 from mschreter/json_demangle_2
ParameterHandler::print_parameters(): Demangle JSON
Matthias Maier [Wed, 25 May 2022 23:07:23 +0000 (18:07 -0500)]
CMake: Skip expensive boost test
This has been finally fixed upstream sometime in late 2018 [1], and this
runtime check is very expensive. Let us skip it for a safe, good
version. I have chosen 1.74 semi randomly because it has been released
in 2020 and is the boost version found in Debian 11.
[1] https://github.com/boostorg/serialization/pull/79#issuecomment-
439726837
Wolfgang Bangerth [Wed, 25 May 2022 22:09:01 +0000 (16:09 -0600)]
Fix the function declaration a doc string is attached to.
Wolfgang Bangerth [Wed, 25 May 2022 22:05:18 +0000 (16:05 -0600)]
Augment documentation of the consensus algorithm free functions.
David Wells [Wed, 25 May 2022 21:15:43 +0000 (17:15 -0400)]
Merge pull request #13812 from kronbichler/simplify_code
Remove unnecessary MPI barriers
Wolfgang Bangerth [Wed, 25 May 2022 18:40:45 +0000 (12:40 -0600)]
Merge pull request #13811 from kronbichler/add_another_pack
Optimize Utilities::pack for std::vector<std::vector<trivial>>
Wolfgang Bangerth [Wed, 25 May 2022 18:32:05 +0000 (12:32 -0600)]
Deprecate the ConsensusAlgorithms::AnonymousProcess class.
Wolfgang Bangerth [Wed, 25 May 2022 18:28:24 +0000 (12:28 -0600)]
Consensus Algorithms: Move template functions into .h file.
Peter Munch [Wed, 25 May 2022 17:39:02 +0000 (19:39 +0200)]
Merge pull request #13798 from kronbichler/speedup_poly_eval
Provide function to evaluate polynomial on array of positions
Matthias Maier [Wed, 25 May 2022 17:20:02 +0000 (12:20 -0500)]
Step-40: Remove an unmatched single quote
Peter Munch [Wed, 25 May 2022 16:03:15 +0000 (18:03 +0200)]
Merge pull request #13802 from kronbichler/simplify_grid_tools
Avoid CellDataTransferBuffer in GridTools::exchange_cell_data_to_ghosts
Peter Munch [Wed, 25 May 2022 14:36:33 +0000 (16:36 +0200)]
Merge pull request #13813 from kronbichler/fix_compile2
Utilities: Fix compile error on certain compilers
Martin Kronbichler [Mon, 23 May 2022 18:45:20 +0000 (20:45 +0200)]
Provide function to evaluate polynomial on array of positions
Magdalena Schreter [Mon, 23 May 2022 21:36:08 +0000 (23:36 +0200)]
Demangle json during output
Co-authored-by: Peter Munch <peterrmuench@gmail.com>
Peter Munch [Wed, 25 May 2022 12:10:41 +0000 (14:10 +0200)]
Merge pull request #13790 from kronbichler/simplify_reinit_shape_info
MatrixFree: Simplify initialization of ShapeInfo
Peter Munch [Wed, 25 May 2022 12:01:35 +0000 (14:01 +0200)]
Merge pull request #13800 from kronbichler/simplify_grid_partitioners
Slightly simplify setup of partitioners for global cell ids
Peter Munch [Wed, 25 May 2022 11:39:37 +0000 (13:39 +0200)]
Merge pull request #13809 from kronbichler/adjust_test_output
Adjust output of tests using PreconditionChebyshev
Martin Kronbichler [Wed, 25 May 2022 11:22:59 +0000 (13:22 +0200)]
Utilities: Fix compile error on certain compilers
Martin Kronbichler [Wed, 25 May 2022 10:27:37 +0000 (12:27 +0200)]
Merge pull request #13810 from simonsticko/assert_hypercube_quadrature_generator
Assert reference cell is hypercube in Discrete*QuadratureGenerator
Martin Kronbichler [Wed, 25 May 2022 10:16:15 +0000 (12:16 +0200)]
Remove unnecessary MPI barriers
Martin Kronbichler [Wed, 25 May 2022 10:08:33 +0000 (12:08 +0200)]
Optimize Utilities::pack for std::vector<std::vector<trivial>>
Martin Kronbichler [Tue, 24 May 2022 11:18:42 +0000 (13:18 +0200)]
Avoid usage of CellDataTransferBuffer in GridTools::exchange_cell_data_to_ghosts
Simon Sticko [Wed, 25 May 2022 07:32:12 +0000 (09:32 +0200)]
Assert reference cell is hypercube in Discrete*QuadratureGenerator
Martin Kronbichler [Tue, 24 May 2022 11:09:27 +0000 (13:09 +0200)]
Slightly simplify setup of partitioners for global cell ids
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