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https://gitweb.dealii.org/ - dealii-svn.git/log
kronbichler [Thu, 29 Sep 2011 15:49:38 +0000 (15:49 +0000)]
Update some comments. Try PreconditionJacobi instead of ILU/IC.
git-svn-id: https://svn.dealii.org/trunk@24470
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bangerth [Thu, 29 Sep 2011 15:49:30 +0000 (15:49 +0000)]
Remove long outdated n_threads parameter.
git-svn-id: https://svn.dealii.org/trunk@24469
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bangerth [Thu, 29 Sep 2011 15:44:06 +0000 (15:44 +0000)]
Make include paths future proof.
git-svn-id: https://svn.dealii.org/trunk@24468
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bangerth [Thu, 29 Sep 2011 15:42:10 +0000 (15:42 +0000)]
Make include path future proof.
git-svn-id: https://svn.dealii.org/trunk@24467
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bangerth [Thu, 29 Sep 2011 15:36:08 +0000 (15:36 +0000)]
Qualify with std:: where necessary.
git-svn-id: https://svn.dealii.org/trunk@24466
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bangerth [Thu, 29 Sep 2011 15:29:11 +0000 (15:29 +0000)]
Make include path future proof.
git-svn-id: https://svn.dealii.org/trunk@24465
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kronbichler [Thu, 29 Sep 2011 10:20:02 +0000 (10:20 +0000)]
Undo r24457 since without MPI those sections are neither initialized nor needed and hence unnecessary.
git-svn-id: https://svn.dealii.org/trunk@24463
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kronbichler [Thu, 29 Sep 2011 10:14:02 +0000 (10:14 +0000)]
Make compile.
git-svn-id: https://svn.dealii.org/trunk@24462
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bangerth [Thu, 29 Sep 2011 02:51:22 +0000 (02:51 +0000)]
Go on documenting significantly more.
git-svn-id: https://svn.dealii.org/trunk@24461
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bangerth [Thu, 29 Sep 2011 02:11:57 +0000 (02:11 +0000)]
Use the right vector's norm as a stopping criterion.
git-svn-id: https://svn.dealii.org/trunk@24460
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bangerth [Wed, 28 Sep 2011 23:35:50 +0000 (23:35 +0000)]
Remove adiabatic quantities since they don't make any sense in the
current setting of an incompressible model. Rewrite the preconditioner
slightly (no functionality change). Write some more documentation.
git-svn-id: https://svn.dealii.org/trunk@24459
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bangerth [Wed, 28 Sep 2011 23:05:21 +0000 (23:05 +0000)]
Make include path future proof.
git-svn-id: https://svn.dealii.org/trunk@24458
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kanschat [Wed, 28 Sep 2011 15:54:32 +0000 (15:54 +0000)]
make this compile again without MPI
git-svn-id: https://svn.dealii.org/trunk@24457
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kanschat [Wed, 28 Sep 2011 05:14:05 +0000 (05:14 +0000)]
make patches in DoFTools
git-svn-id: https://svn.dealii.org/trunk@24456
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kanschat [Wed, 28 Sep 2011 05:10:06 +0000 (05:10 +0000)]
allow flexible levels
git-svn-id: https://svn.dealii.org/trunk@24455
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bangerth [Wed, 28 Sep 2011 02:46:07 +0000 (02:46 +0000)]
Augment a note as suggested by Timo.
git-svn-id: https://svn.dealii.org/trunk@24454
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bangerth [Wed, 28 Sep 2011 02:36:28 +0000 (02:36 +0000)]
Make the Timer class work even if we have configured for MPI but haven't initialized the MPI sub-system.
git-svn-id: https://svn.dealii.org/trunk@24453
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kanschat [Wed, 28 Sep 2011 01:56:07 +0000 (01:56 +0000)]
updated tests
git-svn-id: https://svn.dealii.org/trunk@24452
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bangerth [Tue, 27 Sep 2011 18:06:13 +0000 (18:06 +0000)]
One one.
git-svn-id: https://svn.dealii.org/trunk@24451
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kronbichler [Tue, 27 Sep 2011 16:31:12 +0000 (16:31 +0000)]
Fix some typos, add a few explanations. Extent list of ignore files.
git-svn-id: https://svn.dealii.org/trunk@24450
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heister [Tue, 27 Sep 2011 14:01:48 +0000 (14:01 +0000)]
fix some typos
git-svn-id: https://svn.dealii.org/trunk@24449
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young [Tue, 27 Sep 2011 07:43:37 +0000 (07:43 +0000)]
Simplify a test for PETSc libraries
git-svn-id: https://svn.dealii.org/trunk@24448
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bangerth [Tue, 27 Sep 2011 03:13:21 +0000 (03:13 +0000)]
Use cell->is_locally_owned() where possible.
git-svn-id: https://svn.dealii.org/trunk@24447
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bangerth [Tue, 27 Sep 2011 03:08:38 +0000 (03:08 +0000)]
Discuss the discretization issue.
git-svn-id: https://svn.dealii.org/trunk@24446
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bangerth [Mon, 26 Sep 2011 23:48:18 +0000 (23:48 +0000)]
Streamline initial temperature conditions, given the discussion in the introduction.
git-svn-id: https://svn.dealii.org/trunk@24445
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bangerth [Mon, 26 Sep 2011 23:47:15 +0000 (23:47 +0000)]
Finish (mostly) writing the introduction.
git-svn-id: https://svn.dealii.org/trunk@24444
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bangerth [Mon, 26 Sep 2011 23:20:26 +0000 (23:20 +0000)]
Link in step-32.
git-svn-id: https://svn.dealii.org/trunk@24443
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kanschat [Mon, 26 Sep 2011 20:44:32 +0000 (20:44 +0000)]
test vertex patches
git-svn-id: https://svn.dealii.org/trunk@24442
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kanschat [Mon, 26 Sep 2011 20:32:32 +0000 (20:32 +0000)]
additional output
git-svn-id: https://svn.dealii.org/trunk@24441
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bangerth [Mon, 26 Sep 2011 19:36:36 +0000 (19:36 +0000)]
A few more sentences.
git-svn-id: https://svn.dealii.org/trunk@24440
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bangerth [Mon, 26 Sep 2011 19:29:29 +0000 (19:29 +0000)]
Remove name of unused function argument.
git-svn-id: https://svn.dealii.org/trunk@24439
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bangerth [Mon, 26 Sep 2011 19:26:43 +0000 (19:26 +0000)]
Make compile even without MPI.
git-svn-id: https://svn.dealii.org/trunk@24438
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bangerth [Mon, 26 Sep 2011 19:25:25 +0000 (19:25 +0000)]
Remove now outdated sections.
git-svn-id: https://svn.dealii.org/trunk@24437
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bangerth [Mon, 26 Sep 2011 19:03:52 +0000 (19:03 +0000)]
Convert the current
#ifdef mpi
MPI_Allreduce (...)
#else
...
#endif
into the more obvious
Utilities::MPI::sum/max
statements.
git-svn-id: https://svn.dealii.org/trunk@24436
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bangerth [Mon, 26 Sep 2011 18:50:03 +0000 (18:50 +0000)]
Convert a few places where we can now use Utilities::MPI::sum/max.
git-svn-id: https://svn.dealii.org/trunk@24435
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bangerth [Mon, 26 Sep 2011 18:26:56 +0000 (18:26 +0000)]
Add array versions of the sum/max operators.
git-svn-id: https://svn.dealii.org/trunk@24434
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bangerth [Mon, 26 Sep 2011 17:54:20 +0000 (17:54 +0000)]
Add Utilities::MPI::max.
git-svn-id: https://svn.dealii.org/trunk@24433
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kronbichler [Mon, 26 Sep 2011 15:49:51 +0000 (15:49 +0000)]
One more change to make it work.
git-svn-id: https://svn.dealii.org/trunk@24432
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kanschat [Mon, 26 Sep 2011 15:43:31 +0000 (15:43 +0000)]
declare function for cell patches
git-svn-id: https://svn.dealii.org/trunk@24431
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kronbichler [Mon, 26 Sep 2011 15:39:52 +0000 (15:39 +0000)]
Fix compilation without MPI, second part.
git-svn-id: https://svn.dealii.org/trunk@24430
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kanschat [Mon, 26 Sep 2011 15:26:36 +0000 (15:26 +0000)]
BlockList obsolete
git-svn-id: https://svn.dealii.org/trunk@24429
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kanschat [Mon, 26 Sep 2011 15:06:23 +0000 (15:06 +0000)]
add SparsityPattern::row_position
git-svn-id: https://svn.dealii.org/trunk@24428
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kronbichler [Mon, 26 Sep 2011 15:04:09 +0000 (15:04 +0000)]
Make compile without MPI.
git-svn-id: https://svn.dealii.org/trunk@24427
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bangerth [Mon, 26 Sep 2011 14:16:43 +0000 (14:16 +0000)]
Make compile...
git-svn-id: https://svn.dealii.org/trunk@24426
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bangerth [Mon, 26 Sep 2011 13:53:32 +0000 (13:53 +0000)]
Move Utilities::System::MPI_InitFinalize to Utilities::MPI::MPI_InitFinalize.
git-svn-id: https://svn.dealii.org/trunk@24425
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bangerth [Mon, 26 Sep 2011 13:46:25 +0000 (13:46 +0000)]
Update a comment that is no longer accurate.
git-svn-id: https://svn.dealii.org/trunk@24424
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bangerth [Mon, 26 Sep 2011 13:33:33 +0000 (13:33 +0000)]
Move #ifdef DEAL_II_USE_TRILINOS to before the documentation.
git-svn-id: https://svn.dealii.org/trunk@24423
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bangerth [Mon, 26 Sep 2011 13:33:14 +0000 (13:33 +0000)]
Bring documentation of namespace up to date.
git-svn-id: https://svn.dealii.org/trunk@24422
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bangerth [Mon, 26 Sep 2011 13:30:02 +0000 (13:30 +0000)]
Deprecate Utilities::System::program_uses_mpi in favor of Utilities::System::job_supports_mpi.
git-svn-id: https://svn.dealii.org/trunk@24421
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bangerth [Mon, 26 Sep 2011 13:20:22 +0000 (13:20 +0000)]
Rename Utilities::System::calculate_collective_mpi_min_max_avg to Utilities::MPI::min_max_avg.
git-svn-id: https://svn.dealii.org/trunk@24420
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bangerth [Mon, 26 Sep 2011 13:20:15 +0000 (13:20 +0000)]
Add an assertion.
git-svn-id: https://svn.dealii.org/trunk@24419
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bangerth [Mon, 26 Sep 2011 12:52:19 +0000 (12:52 +0000)]
Move a first batch of MPI-related functions from Utilities::System to Utilities::MPI.
git-svn-id: https://svn.dealii.org/trunk@24418
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bangerth [Mon, 26 Sep 2011 12:36:30 +0000 (12:36 +0000)]
Update properties.
git-svn-id: https://svn.dealii.org/trunk@24417
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bangerth [Mon, 26 Sep 2011 12:02:41 +0000 (12:02 +0000)]
Implement the new function in namespace Utilities::MPI instead. Give it a simpler name.
git-svn-id: https://svn.dealii.org/trunk@24416
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bangerth [Mon, 26 Sep 2011 02:54:51 +0000 (02:54 +0000)]
Go through the multithreading section.
git-svn-id: https://svn.dealii.org/trunk@24415
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bangerth [Mon, 26 Sep 2011 02:36:04 +0000 (02:36 +0000)]
Make sure the test does not become trivial and obvious when using just one processor.
git-svn-id: https://svn.dealii.org/trunk@24414
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bangerth [Mon, 26 Sep 2011 02:18:50 +0000 (02:18 +0000)]
Fix forgotten output file.
git-svn-id: https://svn.dealii.org/trunk@24413
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bangerth [Sun, 25 Sep 2011 22:14:04 +0000 (22:14 +0000)]
Add Utilities::System::calculate_collective_mpi_sum.
git-svn-id: https://svn.dealii.org/trunk@24412
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kanschat [Sun, 25 Sep 2011 20:23:04 +0000 (20:23 +0000)]
restructure member function list
git-svn-id: https://svn.dealii.org/trunk@24411
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bangerth [Sun, 25 Sep 2011 19:19:07 +0000 (19:19 +0000)]
Go through the parallelization on clusters section.
git-svn-id: https://svn.dealii.org/trunk@24409
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bangerth [Sun, 25 Sep 2011 19:06:31 +0000 (19:06 +0000)]
More cross references.
git-svn-id: https://svn.dealii.org/trunk@24408
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bangerth [Sun, 25 Sep 2011 18:10:56 +0000 (18:10 +0000)]
Add a couple entries.
git-svn-id: https://svn.dealii.org/trunk@24407
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bangerth [Sun, 25 Sep 2011 18:09:17 +0000 (18:09 +0000)]
Remove a global function that apparently snuck in there by accident in r23944.
git-svn-id: https://svn.dealii.org/trunk@24406
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bangerth [Sat, 24 Sep 2011 03:33:08 +0000 (03:33 +0000)]
Keep going through the introduction.
git-svn-id: https://svn.dealii.org/trunk@24403
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bangerth [Sat, 24 Sep 2011 03:32:13 +0000 (03:32 +0000)]
Add a paragraph.
git-svn-id: https://svn.dealii.org/trunk@24402
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bangerth [Fri, 23 Sep 2011 21:49:09 +0000 (21:49 +0000)]
Add a whole bunch more.
git-svn-id: https://svn.dealii.org/trunk@24401
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bangerth [Fri, 23 Sep 2011 18:25:59 +0000 (18:25 +0000)]
Add necessary header file.
git-svn-id: https://svn.dealii.org/trunk@24400
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bangerth [Fri, 23 Sep 2011 18:23:54 +0000 (18:23 +0000)]
Allow compilation when using MPI but not p4est.
git-svn-id: https://svn.dealii.org/trunk@24399
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bangerth [Fri, 23 Sep 2011 14:42:15 +0000 (14:42 +0000)]
Write the solver section.
git-svn-id: https://svn.dealii.org/trunk@24398
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bangerth [Fri, 23 Sep 2011 14:32:23 +0000 (14:32 +0000)]
Uniformly use only initials.
git-svn-id: https://svn.dealii.org/trunk@24397
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bangerth [Fri, 23 Sep 2011 14:29:51 +0000 (14:29 +0000)]
Add two. Fix one spelling mistake.
git-svn-id: https://svn.dealii.org/trunk@24396
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kronbichler [Fri, 23 Sep 2011 14:07:30 +0000 (14:07 +0000)]
Add publication.
git-svn-id: https://svn.dealii.org/trunk@24395
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bangerth [Fri, 23 Sep 2011 14:05:12 +0000 (14:05 +0000)]
Add missing documentation of parameter.
git-svn-id: https://svn.dealii.org/trunk@24394
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bangerth [Fri, 23 Sep 2011 14:04:23 +0000 (14:04 +0000)]
Add missing doxygen marker.
git-svn-id: https://svn.dealii.org/trunk@24393
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bangerth [Fri, 23 Sep 2011 14:03:10 +0000 (14:03 +0000)]
Try not to confuse doxygen.
git-svn-id: https://svn.dealii.org/trunk@24392
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bangerth [Fri, 23 Sep 2011 13:25:15 +0000 (13:25 +0000)]
Use TrilinosWrappers::Vector::operator= instead of
TrilinosWrappers::Vector::reinit (., false, true).
git-svn-id: https://svn.dealii.org/trunk@24391
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bangerth [Fri, 23 Sep 2011 04:19:13 +0000 (04:19 +0000)]
Clarify.
git-svn-id: https://svn.dealii.org/trunk@24387
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bangerth [Fri, 23 Sep 2011 04:15:55 +0000 (04:15 +0000)]
A few more sentences.
git-svn-id: https://svn.dealii.org/trunk@24386
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bangerth [Fri, 23 Sep 2011 04:05:03 +0000 (04:05 +0000)]
Adjust indentation.
git-svn-id: https://svn.dealii.org/trunk@24385
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bangerth [Fri, 23 Sep 2011 03:54:11 +0000 (03:54 +0000)]
If possible use a compiler/assembler flag that allows compressing debug sections in object files, saving us about 230 MB of disk space.
git-svn-id: https://svn.dealii.org/trunk@24384
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bangerth [Fri, 23 Sep 2011 01:12:52 +0000 (01:12 +0000)]
Read through the first part of this.
git-svn-id: https://svn.dealii.org/trunk@24383
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bangerth [Fri, 23 Sep 2011 00:48:37 +0000 (00:48 +0000)]
Minor addition.
git-svn-id: https://svn.dealii.org/trunk@24382
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bangerth [Fri, 23 Sep 2011 00:18:59 +0000 (00:18 +0000)]
Make compile. Remove debug output.
git-svn-id: https://svn.dealii.org/trunk@24381
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bangerth [Fri, 23 Sep 2011 00:16:15 +0000 (00:16 +0000)]
Scale the pressure variable into physical units right after
solving. Scale the initial guess right before solving.
git-svn-id: https://svn.dealii.org/trunk@24380
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bangerth [Fri, 23 Sep 2011 00:04:16 +0000 (00:04 +0000)]
Wrap everything into a namespace Step32 as was done for all other
tutorial programs.
git-svn-id: https://svn.dealii.org/trunk@24379
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bangerth [Fri, 23 Sep 2011 00:00:22 +0000 (00:00 +0000)]
A modest start to documenting.
git-svn-id: https://svn.dealii.org/trunk@24378
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bangerth [Thu, 22 Sep 2011 23:56:46 +0000 (23:56 +0000)]
Say something more.
git-svn-id: https://svn.dealii.org/trunk@24377
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bangerth [Thu, 22 Sep 2011 23:54:52 +0000 (23:54 +0000)]
Do something that may not be strictly necessary but helpful in
avoiding future errors.
git-svn-id: https://svn.dealii.org/trunk@24376
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bangerth [Thu, 22 Sep 2011 23:42:56 +0000 (23:42 +0000)]
Simplify code since we know that it runs under MPI.
git-svn-id: https://svn.dealii.org/trunk@24375
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bangerth [Thu, 22 Sep 2011 23:42:16 +0000 (23:42 +0000)]
Add comment.
git-svn-id: https://svn.dealii.org/trunk@24374
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bangerth [Thu, 22 Sep 2011 13:27:18 +0000 (13:27 +0000)]
Fix variable name.
git-svn-id: https://svn.dealii.org/trunk@24367
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bangerth [Thu, 22 Sep 2011 13:24:39 +0000 (13:24 +0000)]
Move variable declarations.
git-svn-id: https://svn.dealii.org/trunk@24366
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bangerth [Thu, 22 Sep 2011 12:40:54 +0000 (12:40 +0000)]
Leave a code block we may want to discuss.
git-svn-id: https://svn.dealii.org/trunk@24365
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bangerth [Thu, 22 Sep 2011 12:40:07 +0000 (12:40 +0000)]
Remove computation of divergences as debug output.
git-svn-id: https://svn.dealii.org/trunk@24364
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bangerth [Thu, 22 Sep 2011 04:01:53 +0000 (04:01 +0000)]
Remove duplicate assignment.
git-svn-id: https://svn.dealii.org/trunk@24363
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bangerth [Thu, 22 Sep 2011 03:57:26 +0000 (03:57 +0000)]
Remove code block used for debugging.
git-svn-id: https://svn.dealii.org/trunk@24362
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bangerth [Thu, 22 Sep 2011 03:56:27 +0000 (03:56 +0000)]
Indent by astyle. May undo that again later.
git-svn-id: https://svn.dealii.org/trunk@24361
0785d39b -7218-0410-832d-
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bangerth [Thu, 22 Sep 2011 03:02:20 +0000 (03:02 +0000)]
Minor adjustments to make this program more similar with ASPECT before we
started to implement significantly new physics there.
git-svn-id: https://svn.dealii.org/trunk@24360
0785d39b -7218-0410-832d-
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bangerth [Wed, 21 Sep 2011 19:55:43 +0000 (19:55 +0000)]
Reference step-21 at one place.
git-svn-id: https://svn.dealii.org/trunk@24358
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bangerth [Wed, 21 Sep 2011 19:52:05 +0000 (19:52 +0000)]
Further correction.
git-svn-id: https://svn.dealii.org/trunk@24357
0785d39b -7218-0410-832d-
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