]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
7 years agoMove the CellDataTransferBuffer class out of an enclosing (useless) class.
Wolfgang Bangerth [Sun, 18 Jun 2017 02:34:16 +0000 (20:34 -0600)]
Move the CellDataTransferBuffer class out of an enclosing (useless) class.

7 years agoRename the cellinfo structure to CellDataTransferBuffer.
Wolfgang Bangerth [Sun, 18 Jun 2017 02:30:55 +0000 (20:30 -0600)]
Rename the cellinfo structure to CellDataTransferBuffer.

Because that is what the class really represents. Also update the documentation.

7 years agoRemove a commented out piece of code.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:43:50 +0000 (19:43 -0600)]
Remove a commented out piece of code.

The code suggests that one could update the cell DoF cache, but the cache only
exists for non-MG DoF indices, whereas the function where the comment resides
deals with MG level DoFs.

7 years agoNon-functional source cleanups at the textual level.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:38:50 +0000 (19:38 -0600)]
Non-functional source cleanups at the textual level.

7 years agoRemove a wrong comment. Add some code documentation.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:37:59 +0000 (19:37 -0600)]
Remove a wrong comment. Add some code documentation.

7 years agoMake control flow more obvious.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:18:55 +0000 (19:18 -0600)]
Make control flow more obvious.

7 years agoReplace an explicit by an implicit loop.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:17:16 +0000 (19:17 -0600)]
Replace an explicit by an implicit loop.

7 years agoNon-functional source cleanups at the textual level.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:15:09 +0000 (19:15 -0600)]
Non-functional source cleanups at the textual level.

7 years agoDo not check that 'new' returned a non-NULL pointer.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:08:56 +0000 (19:08 -0600)]
Do not check that 'new' returned a non-NULL pointer.

'new' hasn't done that since C++98 but instead throws a std::bad_alloc itself. Consequently,
the assertion would never have failed.

7 years agoAdd documentation.
Wolfgang Bangerth [Sun, 18 Jun 2017 01:05:27 +0000 (19:05 -0600)]
Add documentation.

7 years agoExplicitly delete copy constructor and operator.
Wolfgang Bangerth [Sun, 18 Jun 2017 00:58:24 +0000 (18:58 -0600)]
Explicitly delete copy constructor and operator.

7 years agoUse std::unique_ptr instead of std::shared_ptr for DoFHandler::policy.
Wolfgang Bangerth [Sun, 18 Jun 2017 00:55:13 +0000 (18:55 -0600)]
Use std::unique_ptr instead of std::shared_ptr for DoFHandler::policy.

This is possible because DoFHandler has no copy constructor or operator, and consequently
there is no reason to share a policy.

7 years agoAdjust serialization output for use of std::unique_ptr.
Wolfgang Bangerth [Mon, 19 Jun 2017 01:46:59 +0000 (19:46 -0600)]
Adjust serialization output for use of std::unique_ptr.

7 years agoUse std::unique_ptrs instead of raw pointers for level/face objects in class DoFHandler.
Wolfgang Bangerth [Sun, 18 Jun 2017 00:52:15 +0000 (18:52 -0600)]
Use std::unique_ptrs instead of raw pointers for level/face objects in class DoFHandler.

7 years agoRemove an empty 'private:' section.
Wolfgang Bangerth [Sun, 18 Jun 2017 00:39:47 +0000 (18:39 -0600)]
Remove an empty 'private:' section.

7 years agoMerge pull request #4505 from bangerth/strict-enums
Daniel Arndt [Fri, 16 Jun 2017 22:51:40 +0000 (00:51 +0200)]
Merge pull request #4505 from bangerth/strict-enums

Use only enum values, don't look at bits.

7 years agoMerge pull request #4521 from drwells/fix-trilinos-quick-test
Wolfgang Bangerth [Fri, 16 Jun 2017 15:37:02 +0000 (09:37 -0600)]
Merge pull request #4521 from drwells/fix-trilinos-quick-test

Fix the Trilinos quick test.

7 years agoFix the Trilinos quick test. 4521/head
David Wells [Fri, 16 Jun 2017 14:17:13 +0000 (10:17 -0400)]
Fix the Trilinos quick test.

It looks like we did not update this constructor when we removed the serial
vector (the parallel vector's constructor needs an IndexSet, not an integer).

7 years agoMerge pull request #4520 from drwells/vertex-inlining
Martin Kronbichler [Thu, 15 Jun 2017 14:26:40 +0000 (16:26 +0200)]
Merge pull request #4520 from drwells/vertex-inlining

Mark the vertex lookup functions as inline.

7 years agoMark the vertex lookup functions as inline. 4520/head
David Wells [Mon, 12 Jun 2017 15:13:23 +0000 (11:13 -0400)]
Mark the vertex lookup functions as inline.

This lowers the number of calls to vertex() by a lot (down from 229 million to
46 million in a benchmark) and also provides about a 5% speed improvement.

For the sake of posterity, here is the benchmark used here and also in
b584c58d95 and cbb473c59d:

#include <deal.II/base/geometry_info.h>

#include <deal.II/grid/grid_in.h>
#include <deal.II/grid/manifold_lib.h>
#include <deal.II/grid/tria.h>

#include <chrono>
#include <fstream>
#include <iostream>

using namespace dealii;

int main()
{
  constexpr int dim = 2;
  PolarManifold<dim> polar_manifold;
  TransfiniteInterpolationManifold<dim> inner_manifold;
  constexpr types::manifold_id polar_manifold_id = 1;
  constexpr types::manifold_id inner_manifold_id = 2;

  Triangulation<dim> triangulation;
  GridIn<dim> grid_in;
  std::ifstream input_grid("triangulation.msh");
  grid_in.attach_triangulation(triangulation);
  grid_in.read_msh(input_grid);
  triangulation.set_all_manifold_ids(inner_manifold_id);
  for (auto cell : triangulation.active_cell_iterators())
    {
      if (cell->at_boundary())
        {
          cell->set_all_manifold_ids(polar_manifold_id);
        }
    }
  triangulation.set_manifold(polar_manifold_id, polar_manifold);
  inner_manifold.initialize(triangulation);
  triangulation.set_manifold(inner_manifold_id, inner_manifold);

#ifdef DEBUG
  constexpr unsigned int n_refinements = 6;
#else
  constexpr unsigned int n_refinements = 8;
#endif

  for (unsigned int refinement_n = 0; refinement_n < n_refinements; ++refinement_n)
    {
      const auto t0 = std::chrono::high_resolution_clock::now();
      triangulation.refine_global(1);
      const auto t1 = std::chrono::high_resolution_clock::now();
      std::cout << "Number of active cells: "
                << triangulation.n_active_cells()
                << '\n';
      std::cout << "Refinement time: "
                << std::chrono::duration_cast<std::chrono::milliseconds>(t1 - t0).count()
                << '\n';
    }
}

and here is triangulation.msh:

$NOD
25
1  1 0 0
2  0.70710678118654757274 0.70710678118654746172 0
3  6.1232339957367660359e-17 1 0
4  -0.70710678118654746172 0.70710678118654757274 0
5  -1 1.2246467991473532072e-16 0
6  -0.70710678118654768376 -0.70710678118654746172 0
7  -1.8369701987210296875e-16 -1 0
8  0.70710678118654735069 -0.70710678118654768376 0
9  0.5 0 0
10  0.35355339059327378637 0.35355339059327373086 0
11  3.0616169978683830179e-17 0.5 0
12  -0.35355339059327373086 0.35355339059327378637 0
13  -0.5 6.1232339957367660359e-17 0
14  -0.35355339059327384188 -0.35355339059327373086 0
15  -9.1848509936051484375e-17 -0.5 0
16  0.35355339059327367535 -0.35355339059327384188 0
17  -0.22097086912079610954 -0.22097086912079610954 0
18  0.22097086912079610954 -0.22097086912079610954 0
19  -0.22097086912079610954 0.22097086912079610954 0
20  0.22097086912079610954 0.22097086912079610954 0
21  0 -0.22097086912079610954 0
22  -0.22097086912079610954 0 0
23  0.22097086912079610954 0 0
24  0 0.22097086912079610954 0
25  0 0 0
$ENDNOD
$ELM
20
1 3 0 0 4 10 9 1 2
2 3 0 0 4 11 10 2 3
3 3 0 0 4 12 11 3 4
4 3 0 0 4 12 4 5 13
5 3 0 0 4 14 13 5 6
6 3 0 0 4 14 6 7 15
7 3 0 0 4 15 7 8 16
8 3 0 0 4 16 8 1 9
9 3 0 0 4 17 14 15 21
10 3 0 0 4 21 15 16 18
11 3 0 0 4 17 22 13 14
12 3 0 0 4 19 12 13 22
13 3 0 0 4 17 21 25 22
14 3 0 0 4 21 18 23 25
15 3 0 0 4 19 22 25 24
16 3 0 0 4 24 25 23 20
17 3 0 0 4 18 16 9 23
18 3 0 0 4 20 23 9 10
19 3 0 0 4 19 24 11 12
20 3 0 0 4 24 20 10 11
$ENDELM

7 years agoMerge pull request #4515 from jppelteret/fix_tw_solverbase_ad_4443
Bruno Turcksin [Wed, 14 Jun 2017 20:24:52 +0000 (16:24 -0400)]
Merge pull request #4515 from jppelteret/fix_tw_solverbase_ad_4443

Propogate settings set in TrilinosWrappers::Solver<XYZ> to base class.

7 years agoMerge pull request #4516 from drwells/improve-vertex-caching
Martin Kronbichler [Wed, 14 Jun 2017 18:32:11 +0000 (20:32 +0200)]
Merge pull request #4516 from drwells/improve-vertex-caching

Improve vertex caching in a few places.

7 years agoMerge pull request #4517 from masterleinad/fixup_petsc_tests
Jean-Paul Pelteret [Wed, 14 Jun 2017 16:12:16 +0000 (18:12 +0200)]
Merge pull request #4517 from masterleinad/fixup_petsc_tests

Fix up PETSc tests

7 years agoMerge pull request #4518 from luca-heltai/string-delimiter-in-split-string
Luca Heltai [Wed, 14 Jun 2017 16:09:37 +0000 (18:09 +0200)]
Merge pull request #4518 from luca-heltai/string-delimiter-in-split-string

Added split_string_list with string as separator.

7 years agoImprove vertex caching in a few places. 4516/head
David Wells [Mon, 12 Jun 2017 15:13:04 +0000 (11:13 -0400)]
Improve vertex caching in a few places.

Calling cell->vertex() requires several index lookups before indexing into the
global vertex array so this is relatively expensive. This patch lowers, in a
TransfiniteInterpolationManifold benchmark, the number of vertex lookups from
about 361 million to 229 million and lowers the total wall time by about 5%.

7 years agoAdded changelog. 4518/head
Luca Heltai [Wed, 14 Jun 2017 14:06:17 +0000 (16:06 +0200)]
Added changelog.

7 years agoUtilities::split_string_list take a string instead of char
Luca Heltai [Wed, 14 Jun 2017 13:50:05 +0000 (15:50 +0200)]
Utilities::split_string_list take a string instead of char

7 years agoFix up PETSc tests 4517/head
Daniel Arndt [Wed, 14 Jun 2017 13:40:39 +0000 (15:40 +0200)]
Fix up PETSc tests

7 years agoPropogate settings set in TrilinosWrappers::Solver<XYZ> to base class. 4515/head
Jean-Paul Pelteret [Wed, 14 Jun 2017 13:00:27 +0000 (15:00 +0200)]
Propogate settings set in TrilinosWrappers::Solver<XYZ> to base class.

Also allow direct setting of AdditionalData in
TrilinosWrappers::SolverBase.

Fixes #4443.
Supersedes #4512.

7 years agoMerge pull request #4514 from kronbichler/fix_derivative_form_test
Martin Kronbichler [Wed, 14 Jun 2017 08:04:00 +0000 (10:04 +0200)]
Merge pull request #4514 from kronbichler/fix_derivative_form_test

Fix derivative form test by outputting numbers with spaces

7 years agoFix derivative form test by outputting numbers with spaces 4514/head
Martin Kronbichler [Wed, 14 Jun 2017 06:43:52 +0000 (08:43 +0200)]
Fix derivative form test by outputting numbers with spaces

7 years agoMerge pull request #4513 from masterleinad/fix_parameter_handler_test
Martin Kronbichler [Tue, 13 Jun 2017 19:54:00 +0000 (21:54 +0200)]
Merge pull request #4513 from masterleinad/fix_parameter_handler_test

Fix parameter_handler_double_02

7 years agoMerge pull request #4509 from masterleinad/deprecations_1
Wolfgang Bangerth [Tue, 13 Jun 2017 15:31:59 +0000 (09:31 -0600)]
Merge pull request #4509 from masterleinad/deprecations_1

Remove deprecated member functions in vector classes

7 years agoFix parameter_handler_double_02 4513/head
Daniel Arndt [Tue, 13 Jun 2017 15:05:57 +0000 (17:05 +0200)]
Fix parameter_handler_double_02

7 years agoMerge pull request #4510 from masterleinad/deprecations_2
David Wells [Tue, 13 Jun 2017 12:44:40 +0000 (08:44 -0400)]
Merge pull request #4510 from masterleinad/deprecations_2

Clean up AdditionalData in SolverCG and SolverGMRES

7 years agoMerge pull request #4511 from drwells/inline-line-to-cell-vertices
Martin Kronbichler [Tue, 13 Jun 2017 12:41:58 +0000 (14:41 +0200)]
Merge pull request #4511 from drwells/inline-line-to-cell-vertices

Inline GeometryInfo<dim>::line_to_cell_vertices.

7 years agoInline GeometryInfo<dim>::line_to_cell_vertices. 4511/head
David Wells [Mon, 12 Jun 2017 15:13:37 +0000 (11:13 -0400)]
Inline GeometryInfo<dim>::line_to_cell_vertices.

This provides about a 5% speed boost in TransfiniteInterpolationManifold since
the compiler can rewrite the loop over the line vertices.

7 years agoMerge pull request #4504 from bangerth/save-flags
Daniel Arndt [Tue, 13 Jun 2017 10:40:46 +0000 (12:40 +0200)]
Merge pull request #4504 from bangerth/save-flags

Save the state of the stream we're going to write into.

7 years agoCleanup AdditionalData in SolverCG and SolverGMRES 4510/head
Daniel Arndt [Sat, 10 Jun 2017 09:48:35 +0000 (11:48 +0200)]
Cleanup AdditionalData in SolverCG and SolverGMRES

7 years agoMerge pull request #4506 from kronbichler/fix_block_relaxation
Daniel Arndt [Mon, 12 Jun 2017 22:24:14 +0000 (00:24 +0200)]
Merge pull request #4506 from kronbichler/fix_block_relaxation

Implement vmult() method in RelaxationBlock{Jacobi,SOR,SSOR}

7 years agoRemove more deprecated member methods in vector classes 4509/head
Daniel Arndt [Mon, 12 Jun 2017 20:33:06 +0000 (22:33 +0200)]
Remove more deprecated member methods in vector classes

7 years agoRemove deprecated member functions in vector classes
Daniel Arndt [Wed, 7 Jun 2017 15:53:11 +0000 (17:53 +0200)]
Remove deprecated member functions in vector classes

7 years agoMerge pull request #4508 from luca-heltai/unique-ptr-parameter-handler
Wolfgang Bangerth [Mon, 12 Jun 2017 13:40:14 +0000 (07:40 -0600)]
Merge pull request #4508 from luca-heltai/unique-ptr-parameter-handler

Changed clone and create in Patterns to return std::unique_ptr

7 years agoMake clone and crete return std::unique_ptr in Patterns. 4508/head
Luca Heltai [Mon, 12 Jun 2017 10:48:33 +0000 (12:48 +0200)]
Make clone and crete return std::unique_ptr in Patterns.

7 years agoMerge pull request #4507 from luca-heltai/double-to-number
Luca Heltai [Mon, 12 Jun 2017 08:44:17 +0000 (10:44 +0200)]
Merge pull request #4507 from luca-heltai/double-to-number

Fixed DerivativeForm.

7 years agoFixed Determinant in DerivativeForm. 4507/head
Luca Heltai [Mon, 12 Jun 2017 08:08:00 +0000 (10:08 +0200)]
Fixed Determinant in DerivativeForm.

7 years agoImplement vmult() method in RelaxationBlock{Jacobi,SOR,SSOR} 4506/head
Martin Kronbichler [Sun, 11 Jun 2017 20:53:48 +0000 (22:53 +0200)]
Implement vmult() method in RelaxationBlock{Jacobi,SOR,SSOR}

7 years agoMerge pull request #4494 from kronbichler/multigrid_performance_improvement
Martin Kronbichler [Sat, 10 Jun 2017 20:32:23 +0000 (22:32 +0200)]
Merge pull request #4494 from kronbichler/multigrid_performance_improvement

Use shortcut in multigrid smoothing in case we want to zero out vector

7 years agoSimplify step() in PreconditionChebyshev. 4494/head
Martin Kronbichler [Sat, 10 Jun 2017 10:25:11 +0000 (12:25 +0200)]
Simplify step() in PreconditionChebyshev.

7 years agoAdd changelog. 4505/head
Wolfgang Bangerth [Sat, 10 Jun 2017 00:59:58 +0000 (18:59 -0600)]
Add changelog.

7 years agoUse only enum values, don't look at bits.
Wolfgang Bangerth [Sat, 10 Jun 2017 00:57:31 +0000 (18:57 -0600)]
Use only enum values, don't look at bits.

This fixes an (undocumented) oddity in ParameterHandler::print_parameters(): We
were at times looking at individual bits instead of just the declared values
of ParameterHandler::OutputStyle. This presumably allowed for calling that
function with a combination of the OutputStyle flags, for reasons that no
longer seem particularly relevant nor obvious.

This patch removes this possibility from the current implementation of
the function, but retains it for the (deprecated) function
ParameterHandler::print_parameters_section().

7 years agoAdd changelog entry. 4504/head
Wolfgang Bangerth [Sat, 10 Jun 2017 00:28:59 +0000 (18:28 -0600)]
Add changelog entry.

7 years agoAdd test.
Wolfgang Bangerth [Sat, 10 Jun 2017 00:28:45 +0000 (18:28 -0600)]
Add test.

7 years agoSave the state of the stream we're going to write into.
Wolfgang Bangerth [Sat, 10 Jun 2017 00:28:33 +0000 (18:28 -0600)]
Save the state of the stream we're going to write into.

7 years agoMerge pull request #4495 from bangerth/const-prm-print-parameters
David Wells [Fri, 9 Jun 2017 19:31:05 +0000 (15:31 -0400)]
Merge pull request #4495 from bangerth/const-prm-print-parameters

Make ParameterHandler::print_parameters() const.

7 years agoAdd changelog
Martin Kronbichler [Fri, 9 Jun 2017 16:23:08 +0000 (18:23 +0200)]
Add changelog

7 years agoAugment documentation
Martin Kronbichler [Fri, 9 Jun 2017 06:19:01 +0000 (08:19 +0200)]
Augment documentation

7 years agoUse shortcut in multigrid smoothing in case we want to zero out vector
Martin Kronbichler [Tue, 6 Jun 2017 21:50:38 +0000 (23:50 +0200)]
Use shortcut in multigrid smoothing in case we want to zero out vector

7 years agoMerge pull request #4502 from tjhei/document_cell_id
Martin Kronbichler [Fri, 9 Jun 2017 10:58:38 +0000 (12:58 +0200)]
Merge pull request #4502 from tjhei/document_cell_id

document CellId better

7 years agoMerge pull request #4383 from drwells/dof-data-cleanup-1
Martin Kronbichler [Fri, 9 Jun 2017 09:01:02 +0000 (11:01 +0200)]
Merge pull request #4383 from drwells/dof-data-cleanup-1

DataOut_DoFData cleanup

7 years agodocument CellId better 4502/head
Timo Heister [Fri, 9 Jun 2017 08:27:30 +0000 (10:27 +0200)]
document CellId better

7 years agoMerge pull request #4496 from rosskynch/IntegratedLegendreSZ
Martin Kronbichler [Fri, 9 Jun 2017 08:12:38 +0000 (10:12 +0200)]
Merge pull request #4496 from rosskynch/IntegratedLegendreSZ

New polynomials: IntegratedLegendreSZ.

7 years agoMerge pull request #4501 from drwells/set-openmp-environment-variable
Matthias Maier [Fri, 9 Jun 2017 03:09:39 +0000 (22:09 -0500)]
Merge pull request #4501 from drwells/set-openmp-environment-variable

Set OMP_NUM_THREADS=1 in the test suite.

7 years agoFixed comment spacing in header. Fixed some typos in documentation. Replaced use... 4496/head
Ross Kynch [Thu, 8 Jun 2017 22:41:00 +0000 (23:41 +0100)]
Fixed comment spacing in header. Fixed some typos in documentation. Replaced use of pre-computed coefficients and replaced with a simple on-the-fly calculation.

7 years agoSet OMP_NUM_THREADS=2 in the test suite. 4501/head
David Wells [Thu, 8 Jun 2017 20:44:18 +0000 (16:44 -0400)]
Set OMP_NUM_THREADS=2 in the test suite.

7 years agoAdd changelog entries. 4495/head
Wolfgang Bangerth [Wed, 7 Jun 2017 16:02:42 +0000 (10:02 -0600)]
Add changelog entries.

7 years agoMake ParameterHandler::print_parameters() const.
Wolfgang Bangerth [Wed, 7 Jun 2017 16:02:07 +0000 (10:02 -0600)]
Make ParameterHandler::print_parameters() const.

This is done by introducing a new, private function, that duplicates most
of what the now deprecated function ParameterHandler::print_parameters_section()
does, but without changing the state of the object.

The duplication of code will be removed once the deprecated function is removed.

7 years agoMerge pull request #4378 from class4kayaker/fix_initlog
Daniel Arndt [Thu, 8 Jun 2017 15:56:34 +0000 (17:56 +0200)]
Merge pull request #4378 from class4kayaker/fix_initlog

Fix initlog

7 years agoMerge pull request #4499 from kronbichler/fix_print_formatted
Daniel Arndt [Thu, 8 Jun 2017 15:55:32 +0000 (17:55 +0200)]
Merge pull request #4499 from kronbichler/fix_print_formatted

Fix FullMatrix::print_formatted for NaN entries.

7 years agoFix FullMatrix::print_formatted for NaN entries. 4499/head
Martin Kronbichler [Thu, 8 Jun 2017 13:32:06 +0000 (15:32 +0200)]
Fix FullMatrix::print_formatted for NaN entries.

7 years agoMerge pull request #4497 from tjhei/fix_abort_in_assert_parallel
Martin Kronbichler [Thu, 8 Jun 2017 10:02:42 +0000 (12:02 +0200)]
Merge pull request #4497 from tjhei/fix_abort_in_assert_parallel

try to break in gdb when Assert fails

7 years agoAdded non-zero evaluation points to test
Ross Kynch [Wed, 7 Jun 2017 21:26:29 +0000 (22:26 +0100)]
Added non-zero evaluation points to test

7 years agoFix MPI torus test 4378/head
Jonathan Robey [Wed, 7 Jun 2017 18:11:51 +0000 (11:11 -0700)]
Fix MPI torus test

7 years agotry to break in gdb when Assert fails 4497/head
Timo Heister [Wed, 7 Jun 2017 17:26:07 +0000 (19:26 +0200)]
try to break in gdb when Assert fails

addresses #4490 (as good as we can do it), improves #4413

7 years agoAdded IntegratedLegendreSZ which implements the integrated Legendre polynomials descr...
Ross Kynch [Tue, 30 May 2017 21:54:53 +0000 (22:54 +0100)]
Added IntegratedLegendreSZ which implements the integrated Legendre polynomials described in the PhD thesis of Sabine Zaglmayr.

7 years agoMerge pull request #4493 from bangerth/doc-update-2
Wolfgang Bangerth [Wed, 7 Jun 2017 16:07:49 +0000 (10:07 -0600)]
Merge pull request #4493 from bangerth/doc-update-2

Extend the discussion in our exception module.

7 years agoBetter link to the exception module. 4493/head
Wolfgang Bangerth [Tue, 6 Jun 2017 20:40:20 +0000 (14:40 -0600)]
Better link to the exception module.

7 years agoExtend the discussion in our exception module.
Wolfgang Bangerth [Tue, 6 Jun 2017 20:40:20 +0000 (14:40 -0600)]
Extend the discussion in our exception module.

7 years agoMerge pull request #4483 from masterleinad/fix_cylindrical_manifold
Martin Kronbichler [Wed, 7 Jun 2017 10:42:52 +0000 (12:42 +0200)]
Merge pull request #4483 from masterleinad/fix_cylindrical_manifold

Derive CylindricalManifold from ChartManifold

7 years agoMerge pull request #4482 from masterleinad/initialiaze_all_members_trilinos
Martin Kronbichler [Wed, 7 Jun 2017 06:55:10 +0000 (08:55 +0200)]
Merge pull request #4482 from masterleinad/initialiaze_all_members_trilinos

Initialize all member variables in TrilinosWrappers::MPI::Vector

7 years agoMerge pull request #4492 from bangerth/doc-update
Martin Kronbichler [Wed, 7 Jun 2017 06:52:44 +0000 (08:52 +0200)]
Merge pull request #4492 from bangerth/doc-update

Better explain the concept of material_ids.

7 years agoMerge pull request #4491 from Rombur/documentation
Wolfgang Bangerth [Tue, 6 Jun 2017 19:23:54 +0000 (13:23 -0600)]
Merge pull request #4491 from Rombur/documentation

Update error message.

7 years agoBetter explain the concept of material_ids. 4492/head
Wolfgang Bangerth [Tue, 6 Jun 2017 19:21:14 +0000 (13:21 -0600)]
Better explain the concept of material_ids.

7 years agoUpdate error message. 4491/head
Bruno Turcksin [Tue, 6 Jun 2017 19:12:40 +0000 (15:12 -0400)]
Update error message.

7 years agoMerge pull request #4489 from tjhei/document_fp_functions
Luca Heltai [Tue, 6 Jun 2017 15:35:28 +0000 (17:35 +0200)]
Merge pull request #4489 from tjhei/document_fp_functions

document function parser functions

7 years agoEnsure that all member variables are swapped 4482/head
Daniel Arndt [Tue, 6 Jun 2017 14:53:09 +0000 (16:53 +0200)]
Ensure that all member variables are swapped

7 years agodocument function parser functions 4489/head
Timo Heister [Tue, 6 Jun 2017 14:08:06 +0000 (16:08 +0200)]
document function parser functions

7 years agoMerge pull request #4487 from masterleinad/fixup_the_the
David Wells [Tue, 6 Jun 2017 13:15:56 +0000 (09:15 -0400)]
Merge pull request #4487 from masterleinad/fixup_the_the

Fix up 'the the ' in the documentation

7 years agoMove computation of normal vector into anonymous namespace 4483/head
Daniel Arndt [Tue, 6 Jun 2017 13:14:14 +0000 (15:14 +0200)]
Move computation of normal vector into anonymous namespace

7 years agoFix up 'the the ' in the documentation 4487/head
Daniel Arndt [Tue, 6 Jun 2017 11:50:56 +0000 (13:50 +0200)]
Fix up 'the the ' in the documentation

7 years agoInitialize all member variables in TrilinosWrappers::MPI::Vector
Daniel Arndt [Sat, 3 Jun 2017 22:21:50 +0000 (00:21 +0200)]
Initialize all member variables in TrilinosWrappers::MPI::Vector

7 years agoDerive CylindricalManifold from ChartManifold
Daniel Arndt [Sun, 4 Jun 2017 23:37:38 +0000 (01:37 +0200)]
Derive CylindricalManifold from ChartManifold

7 years agoMerge pull request #4450 from kronbichler/mapping_transform_R2U_performance
Wolfgang Bangerth [Mon, 5 Jun 2017 20:34:55 +0000 (14:34 -0600)]
Merge pull request #4450 from kronbichler/mapping_transform_R2U_performance

Performance improvement for MappingQ::transform_real_to_unit_cell

7 years agoAdd changelog 4450/head
Martin Kronbichler [Mon, 5 Jun 2017 14:48:36 +0000 (16:48 +0200)]
Add changelog

7 years agoAdd test
Martin Kronbichler [Mon, 5 Jun 2017 14:45:21 +0000 (16:45 +0200)]
Add test

7 years agoAdjust output on test.
Martin Kronbichler [Sat, 3 Jun 2017 14:56:26 +0000 (16:56 +0200)]
Adjust output on test.

The change in the algorithm resulted in picking another cell for points exactly on the interface between two (or more) cell.s

7 years agoFix bug in eulerian mapping regarding preservation of vertex locations
Martin Kronbichler [Sat, 3 Jun 2017 14:51:00 +0000 (16:51 +0200)]
Fix bug in eulerian mapping regarding preservation of vertex locations

7 years agoUse cheap guess in transfinite manifold
Martin Kronbichler [Sat, 3 Jun 2017 14:50:39 +0000 (16:50 +0200)]
Use cheap guess in transfinite manifold

7 years agoSimplify initial guess for Newton iteration of transform_real_to_unit_cell
Martin Kronbichler [Wed, 31 May 2017 10:39:07 +0000 (12:39 +0200)]
Simplify initial guess for Newton iteration of transform_real_to_unit_cell

7 years agoIntroduce function real_to_unit_cell_affine_approximation.
Martin Kronbichler [Sat, 3 Jun 2017 14:39:14 +0000 (16:39 +0200)]
Introduce function real_to_unit_cell_affine_approximation.


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