Fix bug in compute_normal_flux_constraints, new tests

git-svn-id: https://svn.dealii.org/trunk@30472 0785d39b-7218-0410-832d-ea1e28bc413d

Update comment about no normal flux boundary conditions around reentrant corners

git-svn-id: https://svn.dealii.org/trunk@30471 0785d39b-7218-0410-832d-ea1e28bc413d

Forgot a file

git-svn-id: https://svn.dealii.org/trunk@30470 0785d39b-7218-0410-832d-ea1e28bc413d

Update instantiations.

git-svn-id: https://svn.dealii.org/trunk@30467 0785d39b-7218-0410-832d-ea1e28bc413d

Add function VectorTools::compute_normal_flux_constraints

git-svn-id: https://svn.dealii.org/trunk@30466 0785d39b-7218-0410-832d-ea1e28bc413d

test output reasonable

git-svn-id: https://svn.dealii.org/trunk@30465 0785d39b-7218-0410-832d-ea1e28bc413d

use correct MPI communicator

git-svn-id: https://svn.dealii.org/trunk@30464 0785d39b-7218-0410-832d-ea1e28bc413d

print some output

git-svn-id: https://svn.dealii.org/trunk@30463 0785d39b-7218-0410-832d-ea1e28bc413d

text compiles

git-svn-id: https://svn.dealii.org/trunk@30462 0785d39b-7218-0410-832d-ea1e28bc413d

try to fix HDF5 not being exported to external projects

git-svn-id: https://svn.dealii.org/trunk@30460 0785d39b-7218-0410-832d-ea1e28bc413d

new test for mg to see if assembly works

git-svn-id: https://svn.dealii.org/trunk@30459 0785d39b-7218-0410-832d-ea1e28bc413d

new tet for mg::SparseMatrixCollection

git-svn-id: https://svn.dealii.org/trunk@30458 0785d39b-7218-0410-832d-ea1e28bc413d

clean code in Assembler::MGMatrixSimple
add mg::SparseMatrixCollection

git-svn-id: https://svn.dealii.org/trunk@30457 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust test output.

git-svn-id: https://svn.dealii.org/trunk@30456 0785d39b-7218-0410-832d-ea1e28bc413d

more comments

git-svn-id: https://svn.dealii.org/trunk@30455 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Fix FindP4EST.cmake, see issue 102

git-svn-id: https://svn.dealii.org/trunk@30454 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust more test output

git-svn-id: https://svn.dealii.org/trunk@30453 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust some output

git-svn-id: https://svn.dealii.org/trunk@30452 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust output, mention change

git-svn-id: https://svn.dealii.org/trunk@30451 0785d39b-7218-0410-832d-ea1e28bc413d

Change MappingQ support points from equispaced points into Gauss-Lobatto points. Let's see next if there are more tests failing outside fe.

git-svn-id: https://svn.dealii.org/trunk@30450 0785d39b-7218-0410-832d-ea1e28bc413d

Fix typo.

git-svn-id: https://svn.dealii.org/trunk@30449 0785d39b-7218-0410-832d-ea1e28bc413d

two more SVG flags

git-svn-id: https://svn.dealii.org/trunk@30448 0785d39b-7218-0410-832d-ea1e28bc413d

check local renumbering

git-svn-id: https://svn.dealii.org/trunk@30446 0785d39b-7218-0410-832d-ea1e28bc413d

fix bug in local renumbering

git-svn-id: https://svn.dealii.org/trunk@30445 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Cleanup

git-svn-id: https://svn.dealii.org/trunk@30441 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Pick up debug and optimized versions of p4est if available

git-svn-id: https://svn.dealii.org/trunk@30440 0785d39b-7218-0410-832d-ea1e28bc413d

add height and width parameters to svg output; add tangential ip

git-svn-id: https://svn.dealii.org/trunk@30437 0785d39b-7218-0410-832d-ea1e28bc413d

Add instantiations

git-svn-id: https://svn.dealii.org/trunk@30435 0785d39b-7218-0410-832d-ea1e28bc413d

Mention changes.

git-svn-id: https://svn.dealii.org/trunk@30433 0785d39b-7218-0410-832d-ea1e28bc413d

Throw the exception at the end of ParameterHandler::declare_entry() so as to make sure that it can be caught, but that the entry nevertheless has been allocated properly.

git-svn-id: https://svn.dealii.org/trunk@30430 0785d39b-7218-0410-832d-ea1e28bc413d

Fix instantiation

git-svn-id: https://svn.dealii.org/trunk@30428 0785d39b-7218-0410-832d-ea1e28bc413d

remove warnings

git-svn-id: https://svn.dealii.org/trunk@30427 0785d39b-7218-0410-832d-ea1e28bc413d

Cleanup includes

git-svn-id: https://svn.dealii.org/trunk@30426 0785d39b-7218-0410-832d-ea1e28bc413d

Split out DataOut_DoFData from data_out.cc/h

git-svn-id: https://svn.dealii.org/trunk@30425 0785d39b-7218-0410-832d-ea1e28bc413d

Split also solution_transfer (now four instantiation files) and fe_tools

git-svn-id: https://svn.dealii.org/trunk@30423 0785d39b-7218-0410-832d-ea1e28bc413d

Avoid Vector::scale

git-svn-id: https://svn.dealii.org/trunk@30421 0785d39b-7218-0410-832d-ea1e28bc413d

remove warning

git-svn-id: https://svn.dealii.org/trunk@30420 0785d39b-7218-0410-832d-ea1e28bc413d

Avoid deprecated function

git-svn-id: https://svn.dealii.org/trunk@30419 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust program output

git-svn-id: https://svn.dealii.org/trunk@30414 0785d39b-7218-0410-832d-ea1e28bc413d

Add instantiation that got lost when splitting files

git-svn-id: https://svn.dealii.org/trunk@30413 0785d39b-7218-0410-832d-ea1e28bc413d

Marc fixes a typographical bug in MathGL output.

git-svn-id: https://svn.dealii.org/trunk@30412 0785d39b-7218-0410-832d-ea1e28bc413d

Split two more files into three files each.

git-svn-id: https://svn.dealii.org/trunk@30407 0785d39b-7218-0410-832d-ea1e28bc413d

It turns out that, despite assurances in the doc strings, we did not check that the default value of parameters actually matches the provided pattern. Make sure we fix this oversight.

git-svn-id: https://svn.dealii.org/trunk@30406 0785d39b-7218-0410-832d-ea1e28bc413d

Make the separator in Patterns::Map user defined.

git-svn-id: https://svn.dealii.org/trunk@30405 0785d39b-7218-0410-832d-ea1e28bc413d

Make the separator in Patterns::List user defined.

git-svn-id: https://svn.dealii.org/trunk@30404 0785d39b-7218-0410-832d-ea1e28bc413d

Split up error_estimator into two files, improve the generic face estimate part so it compiles quicker, too.

git-svn-id: https://svn.dealii.org/trunk@30400 0785d39b-7218-0410-832d-ea1e28bc413d

one step further

git-svn-id: https://svn.dealii.org/trunk@30395 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Remove an obsolete file

git-svn-id: https://svn.dealii.org/trunk@30390 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Split library lists depending on optimized, debug or general keywords

git-svn-id: https://svn.dealii.org/trunk@30389 0785d39b-7218-0410-832d-ea1e28bc413d

disable flux matrices

git-svn-id: https://svn.dealii.org/trunk@30388 0785d39b-7218-0410-832d-ea1e28bc413d

Fix SystemSimple

git-svn-id: https://svn.dealii.org/trunk@30387 0785d39b-7218-0410-832d-ea1e28bc413d

add missing initialize for constraints

git-svn-id: https://svn.dealii.org/trunk@30386 0785d39b-7218-0410-832d-ea1e28bc413d

run into trouble

git-svn-id: https://svn.dealii.org/trunk@30385 0785d39b-7218-0410-832d-ea1e28bc413d

Write some more introduction, correct Neumann boundary values

git-svn-id: https://svn.dealii.org/trunk@30384 0785d39b-7218-0410-832d-ea1e28bc413d

copy step 16

git-svn-id: https://svn.dealii.org/trunk@30381 0785d39b-7218-0410-832d-ea1e28bc413d

test DG with constraints and remove text

git-svn-id: https://svn.dealii.org/trunk@30380 0785d39b-7218-0410-832d-ea1e28bc413d

multigrid bug fixed

git-svn-id: https://svn.dealii.org/trunk@30377 0785d39b-7218-0410-832d-ea1e28bc413d

Target eigenvalues iff spectral transformation is in use.

git-svn-id: https://svn.dealii.org/trunk@30370 0785d39b-7218-0410-832d-ea1e28bc413d

Can not compute residual norms if no eigenvectors have converged.

git-svn-id: https://svn.dealii.org/trunk@30369 0785d39b-7218-0410-832d-ea1e28bc413d

Cleanup some code so it compiles much quicker

git-svn-id: https://svn.dealii.org/trunk@30364 0785d39b-7218-0410-832d-ea1e28bc413d

Provide correct output.

git-svn-id: https://svn.dealii.org/trunk@30363 0785d39b-7218-0410-832d-ea1e28bc413d

Fix compilation

git-svn-id: https://svn.dealii.org/trunk@30362 0785d39b-7218-0410-832d-ea1e28bc413d

Split vector_tools into several files to speed up compilation. vector_tools_integrate_difference still takes too long.

git-svn-id: https://svn.dealii.org/trunk@30361 0785d39b-7218-0410-832d-ea1e28bc413d

Patch by Juan Carlos Araujo Cabarcas: use higher precision arithmetic in computing some data for high order mappings.

git-svn-id: https://svn.dealii.org/trunk@30357 0785d39b-7218-0410-832d-ea1e28bc413d

Fix bug #85 (http://code.google.com/p/dealii/issues/detail?id=85): Allow compilation of SLEPcWrappers also for 64-bit indices.

git-svn-id: https://svn.dealii.org/trunk@30356 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Fix a strange CMake bug

git-svn-id: https://svn.dealii.org/trunk@30348 0785d39b-7218-0410-832d-ea1e28bc413d

Add table of contents.

git-svn-id: https://svn.dealii.org/trunk@30347 0785d39b-7218-0410-832d-ea1e28bc413d

missing keyword

git-svn-id: https://svn.dealii.org/trunk@30346 0785d39b-7218-0410-832d-ea1e28bc413d

reformat comments

git-svn-id: https://svn.dealii.org/trunk@30343 0785d39b-7218-0410-832d-ea1e28bc413d

Make it run, finally..

git-svn-id: https://svn.dealii.org/trunk@30342 0785d39b-7218-0410-832d-ea1e28bc413d

Implement interpolation between FE_Nothing and FE_Q.

git-svn-id: https://svn.dealii.org/trunk@30341 0785d39b-7218-0410-832d-ea1e28bc413d

Improve error message.

git-svn-id: https://svn.dealii.org/trunk@30339 0785d39b-7218-0410-832d-ea1e28bc413d

update install instructions

git-svn-id: https://svn.dealii.org/trunk@30334 0785d39b-7218-0410-832d-ea1e28bc413d

Mark a member as const.

git-svn-id: https://svn.dealii.org/trunk@30333 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Rewrite parts of FindTrilinos.cmake to be way faster

git-svn-id: https://svn.dealii.org/trunk@30332 0785d39b-7218-0410-832d-ea1e28bc413d

Add testcase for bug #83.

git-svn-id: https://svn.dealii.org/trunk@30331 0785d39b-7218-0410-832d-ea1e28bc413d

Remove stray 'typename'.

git-svn-id: https://svn.dealii.org/trunk@30330 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Prepare build system for porting the test suite to CMake

git-svn-id: https://svn.dealii.org/trunk@30329 0785d39b-7218-0410-832d-ea1e28bc413d

Fix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are already identity constrained to each other. Add testcase by David Emerson.

git-svn-id: https://svn.dealii.org/trunk@30328 0785d39b-7218-0410-832d-ea1e28bc413d

Fix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are already identity constrained to each other.

git-svn-id: https://svn.dealii.org/trunk@30327 0785d39b-7218-0410-832d-ea1e28bc413d

Provide ConstraintMatrix::are_identity_constrained()

git-svn-id: https://svn.dealii.org/trunk@30326 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Some final changes:

  - Get the behaviour for BOOST_DIR right
  - Print out *_DIR variables in detailed.log as well

git-svn-id: https://svn.dealii.org/trunk@30325 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Bugfix, use BOOST_ROOT instead of Boost_DIR.

git-svn-id: https://svn.dealii.org/trunk@30324 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Fix Boost versin numbers and BOOST_DIR

git-svn-id: https://svn.dealii.org/trunk@30323 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Bugfix: Rename "POINT" by "PATCH"

git-svn-id: https://svn.dealii.org/trunk@30322 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Print version numbers into detailed.log

git-svn-id: https://svn.dealii.org/trunk@30321 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Unify version variables

git-svn-id: https://svn.dealii.org/trunk@30320 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Unify version variables

git-svn-id: https://svn.dealii.org/trunk@30319 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: FindP4EST.cmake now export VERSION numbers as well

git-svn-id: https://svn.dealii.org/trunk@30318 0785d39b-7218-0410-832d-ea1e28bc413d

Fix computation of column widths.

git-svn-id: https://svn.dealii.org/trunk@30317 0785d39b-7218-0410-832d-ea1e28bc413d

Patch by Oleh Krehel: add org-mode as a possibility for TableHandler::write_text().

git-svn-id: https://svn.dealii.org/trunk@30316 0785d39b-7218-0410-832d-ea1e28bc413d

Patch by Scott Miller (and testcases by me): Add scalar_product functions between tensors.

git-svn-id: https://svn.dealii.org/trunk@30315 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Reenable -O2 for intel-12* compilers. Set -no-ansi-alias unconditionally

git-svn-id: https://svn.dealii.org/trunk@30314 0785d39b-7218-0410-832d-ea1e28bc413d

Use usual function argument arrangement.

git-svn-id: https://svn.dealii.org/trunk@30313 0785d39b-7218-0410-832d-ea1e28bc413d

Patch by Juan Carlos Araujo Cabarcas: Relax an assertion.

git-svn-id: https://svn.dealii.org/trunk@30312 0785d39b-7218-0410-832d-ea1e28bc413d

Patch by Armin Ghajar Jazi: Also instantiate MappingQEulerian for Trilinos vectors.

git-svn-id: https://svn.dealii.org/trunk@30311 0785d39b-7218-0410-832d-ea1e28bc413d

remove debug output

git-svn-id: https://svn.dealii.org/trunk@30310 0785d39b-7218-0410-832d-ea1e28bc413d

Fix a bug in PreconditionIdentity.

git-svn-id: https://svn.dealii.org/trunk@30309 0785d39b-7218-0410-832d-ea1e28bc413d

Fix typo.

git-svn-id: https://svn.dealii.org/trunk@30308 0785d39b-7218-0410-832d-ea1e28bc413d

PETSc/Trilinos BlockVectors now only allow assignment if destination is empty or had the same number of blocks

git-svn-id: https://svn.dealii.org/trunk@30307 0785d39b-7218-0410-832d-ea1e28bc413d