]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #9490 from simonsticko/add_hyper_cube
David Wells [Tue, 31 Mar 2020 12:42:20 +0000 (08:42 -0400)]
Merge pull request #9490 from simonsticko/add_hyper_cube

Add header quadrature_generator.h

4 years agoAdd header quadrature_generator.h 9490/head
Simon Sticko [Thu, 6 Feb 2020 16:26:04 +0000 (17:26 +0100)]
Add header quadrature_generator.h

Add a header to be used for implementing a QuadratureGenerator class, which
should generate immersed quadrature rules for the different regions of a cell
intersected by the zero contour of a level set function. Add a hypercube class
in a internal namespace QuadratureGeneratorImplementation, which is needed to
implement the underlying algorithm.

4 years agoMerge pull request #9781 from kronbichler/bug_mg_ghost_layer_periodic
David Wells [Mon, 30 Mar 2020 22:55:28 +0000 (18:55 -0400)]
Merge pull request #9781 from kronbichler/bug_mg_ghost_layer_periodic

Fix a bug in mg ghost layer with periodicity and n_levels=1

4 years agoMerge pull request #9780 from bangerth/26
Daniel Arndt [Mon, 30 Mar 2020 22:10:40 +0000 (18:10 -0400)]
Merge pull request #9780 from bangerth/26

Output time and time step in step-26.

4 years agoMerge pull request #9779 from masterleinad/remove_mg_set_debug
Martin Kronbichler [Mon, 30 Mar 2020 19:11:51 +0000 (21:11 +0200)]
Merge pull request #9779 from masterleinad/remove_mg_set_debug

Remove Multigrid::set_debug()

4 years agoMerge pull request #9668 from agrayver/remove_doc_copypaste
Martin Kronbichler [Mon, 30 Mar 2020 18:24:33 +0000 (20:24 +0200)]
Merge pull request #9668 from agrayver/remove_doc_copypaste

Use copydoc for Python wrappers

4 years agoChangelog 9781/head
Martin Kronbichler [Mon, 30 Mar 2020 17:15:44 +0000 (19:15 +0200)]
Changelog

4 years agoTest case
Martin Kronbichler [Mon, 30 Mar 2020 17:13:23 +0000 (19:13 +0200)]
Test case

4 years agoMake sure periodicity is set before constructing hierarchy
Martin Kronbichler [Mon, 30 Mar 2020 17:13:08 +0000 (19:13 +0200)]
Make sure periodicity is set before constructing hierarchy

4 years agoUpdate a changelog entry. 9780/head
Wolfgang Bangerth [Mon, 30 Mar 2020 17:02:00 +0000 (11:02 -0600)]
Update a changelog entry.

4 years agoOutput time and time step in step-26.
Wolfgang Bangerth [Mon, 30 Mar 2020 17:00:42 +0000 (11:00 -0600)]
Output time and time step in step-26.

4 years agoChange log entry 9779/head
Daniel Arndt [Mon, 30 Mar 2020 16:33:42 +0000 (12:33 -0400)]
Change log entry

4 years agoUpdate tests
Daniel Arndt [Mon, 30 Mar 2020 16:29:40 +0000 (12:29 -0400)]
Update tests

4 years agoUse signals in Multigrid::level_step()
Daniel Arndt [Mon, 30 Mar 2020 16:28:49 +0000 (12:28 -0400)]
Use signals in Multigrid::level_step()

4 years agoMerge pull request #9773 from peterrum/paths_fix_order
Wolfgang Bangerth [Mon, 30 Mar 2020 15:06:49 +0000 (17:06 +0200)]
Merge pull request #9773 from peterrum/paths_fix_order

Fix order of module graphs

4 years agoMerge pull request #9775 from kronbichler/fix_utilities_pow
Daniel Arndt [Mon, 30 Mar 2020 13:40:06 +0000 (09:40 -0400)]
Merge pull request #9775 from kronbichler/fix_utilities_pow

Avoid unnecessary integer overflow in Utilities::pow()

4 years agoMerge pull request #9772 from bangerth/graph
Timo Heister [Mon, 30 Mar 2020 13:35:40 +0000 (09:35 -0400)]
Merge pull request #9772 from bangerth/graph

Further try and disentangle the tutorial graph a bit.

4 years agoMerge pull request #9776 from kronbichler/typo_mapping_info
Daniel Arndt [Mon, 30 Mar 2020 13:09:07 +0000 (09:09 -0400)]
Merge pull request #9776 from kronbichler/typo_mapping_info

MappingInfo: Use correct update flags for face quadrature fields

4 years agoMappingInfo: Use correct update flags for face quadrature fields 9776/head
Martin Kronbichler [Mon, 30 Mar 2020 06:30:35 +0000 (08:30 +0200)]
MappingInfo: Use correct update flags for face quadrature fields

4 years agoTwo test cases 9775/head
Martin Kronbichler [Mon, 30 Mar 2020 06:21:46 +0000 (08:21 +0200)]
Two test cases

4 years agoAvoid unnecessary integer overflow of Utilities::pow()
Martin Kronbichler [Mon, 30 Mar 2020 06:21:26 +0000 (08:21 +0200)]
Avoid unnecessary integer overflow of Utilities::pow()

4 years agoFix order of module graphs 9773/head
Peter Munch [Sun, 29 Mar 2020 21:55:16 +0000 (23:55 +0200)]
Fix order of module graphs

4 years agoMerge pull request #9769 from kronbichler/fix_mapping_fe_field_similarity
Martin Kronbichler [Mon, 30 Mar 2020 05:15:36 +0000 (07:15 +0200)]
Merge pull request #9769 from kronbichler/fix_mapping_fe_field_similarity

Fix mapping fe field similarity

4 years agoMerge pull request #9770 from bangerth/67
Martin Kronbichler [Mon, 30 Mar 2020 04:51:23 +0000 (06:51 +0200)]
Merge pull request #9770 from bangerth/67

Also make step-67 depend on step-40.

4 years agoTest case for MappingManifold 9769/head
Martin Kronbichler [Sun, 29 Mar 2020 18:08:12 +0000 (20:08 +0200)]
Test case for MappingManifold

4 years agochangelog
Martin Kronbichler [Sun, 29 Mar 2020 13:58:46 +0000 (15:58 +0200)]
changelog

4 years agoTestcase
Martin Kronbichler [Sun, 29 Mar 2020 13:58:39 +0000 (15:58 +0200)]
Testcase

4 years agoRemove cell similarity for MappingFEField as we cannot know that
Martin Kronbichler [Sun, 29 Mar 2020 13:58:20 +0000 (15:58 +0200)]
Remove cell similarity for MappingFEField as we cannot know that

4 years agoMerge pull request #9000 from bangerth/nedelec
Martin Kronbichler [Sun, 29 Mar 2020 17:39:57 +0000 (19:39 +0200)]
Merge pull request #9000 from bangerth/nedelec

Fix a bug with a combination Q2 x Nedelec element.

4 years agoMerge pull request #9771 from bangerth/doc
Martin Kronbichler [Sun, 29 Mar 2020 17:25:07 +0000 (19:25 +0200)]
Merge pull request #9771 from bangerth/doc

Fix broken documentation.

4 years agoFurther try and disentangle the tutorial graph a bit. 9772/head
Wolfgang Bangerth [Sun, 29 Mar 2020 17:15:04 +0000 (11:15 -0600)]
Further try and disentangle the tutorial graph a bit.

4 years agoFix broken documentation. 9771/head
Wolfgang Bangerth [Sun, 29 Mar 2020 16:48:15 +0000 (10:48 -0600)]
Fix broken documentation.

This was apparently mangled when we ran clang-indent the first time.

4 years agoAlso make step-67 depend on step-40. 9770/head
Wolfgang Bangerth [Sun, 29 Mar 2020 16:45:42 +0000 (10:45 -0600)]
Also make step-67 depend on step-40.

Its parallel node step-69 does, and it only seems reasonable to retain that symmetry.

4 years agoMerge pull request #9765 from rezarastak/table_handler_doc
Wolfgang Bangerth [Sun, 29 Mar 2020 16:09:54 +0000 (18:09 +0200)]
Merge pull request #9765 from rezarastak/table_handler_doc

Minor documentation changes for TableHandler

4 years agoMerge pull request #9764 from peterrum/pow_t
Wolfgang Bangerth [Sun, 29 Mar 2020 16:07:40 +0000 (18:07 +0200)]
Merge pull request #9764 from peterrum/pow_t

Template Utilities::pow()

4 years agoAnd again the fix for the project_bv_curl_conf_04 test 9000/head
Winnifried Wollner [Mon, 9 Mar 2020 13:18:33 +0000 (14:18 +0100)]
And again the fix for the project_bv_curl_conf_04 test

4 years agoRemove Multigrid::set_debug
Daniel Arndt [Sun, 29 Mar 2020 13:37:39 +0000 (09:37 -0400)]
Remove Multigrid::set_debug

4 years agoMerge pull request #9766 from kronbichler/fix_tutorial_graph
Daniel Arndt [Sun, 29 Mar 2020 13:25:31 +0000 (09:25 -0400)]
Merge pull request #9766 from kronbichler/fix_tutorial_graph

Follow-up to step-67: fix tutorial graph

4 years agoFollow-up to step-67: fix tutorial graph 9766/head
Martin Kronbichler [Sun, 29 Mar 2020 11:17:32 +0000 (13:17 +0200)]
Follow-up to step-67: fix tutorial graph

4 years agoMinor documentation changes for TableHandler 9765/head
Reza Rastak [Sun, 29 Mar 2020 05:13:50 +0000 (22:13 -0700)]
Minor documentation changes for TableHandler

4 years agoMerge pull request #9763 from kronbichler/avoid_n_array_elements
Daniel Arndt [Sun, 29 Mar 2020 01:30:57 +0000 (21:30 -0400)]
Merge pull request #9763 from kronbichler/avoid_n_array_elements

Avoid deprecated VectorizedArray::n_array_elements

4 years agoTemplate Utilities::pow() 9764/head
Peter Munch [Sat, 28 Mar 2020 22:05:21 +0000 (23:05 +0100)]
Template Utilities::pow()

4 years agoAvoid deprecated VectorizedArray::n_array_elements 9763/head
Martin Kronbichler [Sat, 28 Mar 2020 21:56:53 +0000 (22:56 +0100)]
Avoid deprecated VectorizedArray::n_array_elements

4 years agoMerge pull request #8319 from kronbichler/step-67
Wolfgang Bangerth [Sat, 28 Mar 2020 21:16:10 +0000 (22:16 +0100)]
Merge pull request #8319 from kronbichler/step-67

step-67: explicit time integration with matrix-free implementations

4 years agoMerge pull request #9761 from masterleinad/remove_block_matrix_array
Martin Kronbichler [Sat, 28 Mar 2020 20:09:45 +0000 (21:09 +0100)]
Merge pull request #9761 from masterleinad/remove_block_matrix_array

Delete BlockMatrixArray and MeanValueFilter

4 years agoMerge pull request #9755 from bangerth/graphs
Martin Kronbichler [Sat, 28 Mar 2020 17:58:17 +0000 (18:58 +0100)]
Merge pull request #9755 from bangerth/graphs

Copy pieces of the module graph into some of the modules.

4 years agoMerge pull request #9759 from masterleinad/fix_dof_tools_12a
Martin Kronbichler [Sat, 28 Mar 2020 17:57:59 +0000 (18:57 +0100)]
Merge pull request #9759 from masterleinad/fix_dof_tools_12a

Fix failing test dof_tools_12a

4 years agoMerge pull request #9656 from kronbichler/mapping_q_optimize
Wolfgang Bangerth [Sat, 28 Mar 2020 17:03:45 +0000 (18:03 +0100)]
Merge pull request #9656 from kronbichler/mapping_q_optimize

Implement matrix-free evaluation of geometry for MF::MappingInfo

4 years agoChangelog 8319/head
Martin Kronbichler [Sat, 28 Mar 2020 16:23:58 +0000 (17:23 +0100)]
Changelog

4 years agoDelete BlockMatrixArray and MeanValueFilter 9761/head
Daniel Arndt [Thu, 26 Mar 2020 16:08:55 +0000 (12:08 -0400)]
Delete BlockMatrixArray and MeanValueFilter

4 years agoFix failing test dof_tools_12a 9759/head
Daniel Arndt [Sat, 28 Mar 2020 14:52:08 +0000 (10:52 -0400)]
Fix failing test dof_tools_12a

4 years agoChangelog 9656/head
Martin Kronbichler [Sat, 14 Mar 2020 21:57:25 +0000 (22:57 +0100)]
Changelog

4 years agoOne new test, one included in existing one
Martin Kronbichler [Sat, 14 Mar 2020 21:50:07 +0000 (22:50 +0100)]
One new test, one included in existing one

4 years agoImplement matrix-free evaluation of geometry for MF::MappingInfo
Martin Kronbichler [Fri, 13 Mar 2020 08:27:21 +0000 (09:27 +0100)]
Implement matrix-free evaluation of geometry for MF::MappingInfo

4 years agoInstantiate ShapeInfo for all vectorized arrays
Martin Kronbichler [Sat, 28 Mar 2020 14:33:45 +0000 (15:33 +0100)]
Instantiate ShapeInfo for all vectorized arrays

4 years agoFix Wolfgang's final comments
Martin Kronbichler [Sat, 28 Mar 2020 10:04:13 +0000 (11:04 +0100)]
Fix Wolfgang's final comments

4 years agoMerge pull request #5 from bangerth/step-67-3
Martin Kronbichler [Sat, 28 Mar 2020 06:57:08 +0000 (07:57 +0100)]
Merge pull request #5 from bangerth/step-67-3

My last changes to step-67.

4 years agoMerge pull request #9753 from masterleinad/remove_lapackfullmatrix_apply_lu_factorization
Martin Kronbichler [Sat, 28 Mar 2020 06:38:34 +0000 (07:38 +0100)]
Merge pull request #9753 from masterleinad/remove_lapackfullmatrix_apply_lu_factorization

Remove deprecated LAPACKFullMatrix::apply_lu_factorization

4 years agoMerge pull request #9754 from bangerth/52
Martin Kronbichler [Sat, 28 Mar 2020 06:37:51 +0000 (07:37 +0100)]
Merge pull request #9754 from bangerth/52

Also output the current time in .vtu files in step-52.

4 years agoCopy pieces of the module graph into some of the modules. 9755/head
Wolfgang Bangerth [Sat, 28 Mar 2020 03:41:53 +0000 (21:41 -0600)]
Copy pieces of the module graph into some of the modules.

For some modules, this patch copies a subset of the big module graph into the
module documentation, with the current module highlighted. This makes it
easier to see the connections between modules not just from the documentation
front page, but also from the individual modules.

4 years agoMerge pull request #9752 from masterleinad/remove_deprecated_set_manifold
Daniel Arndt [Sat, 28 Mar 2020 03:39:21 +0000 (23:39 -0400)]
Merge pull request #9752 from masterleinad/remove_deprecated_set_manifold

Remove Triangulation::set_manifold()

4 years agoAdd a changelog entry. 9754/head
Wolfgang Bangerth [Sat, 28 Mar 2020 03:12:10 +0000 (21:12 -0600)]
Add a changelog entry.

4 years agoAlso output the current time in .vtu files in step-52.
Wolfgang Bangerth [Sat, 28 Mar 2020 03:12:00 +0000 (21:12 -0600)]
Also output the current time in .vtu files in step-52.

4 years agoLink to step-67.
Wolfgang Bangerth [Sat, 28 Mar 2020 00:00:31 +0000 (18:00 -0600)]
Link to step-67.

4 years agoLink to step-67 and 69.
Wolfgang Bangerth [Sat, 28 Mar 2020 00:00:18 +0000 (18:00 -0600)]
Link to step-67 and 69.

4 years agoBe pedantically correct when looping over cells.
Wolfgang Bangerth [Sat, 28 Mar 2020 00:01:33 +0000 (18:01 -0600)]
Be pedantically correct when looping over cells.

4 years agoMore work on the .cc.
Wolfgang Bangerth [Fri, 27 Mar 2020 15:48:54 +0000 (09:48 -0600)]
More work on the .cc.

4 years agoRemove deprecated LAPACKFullMatrix::apply_lu_factorization 9753/head
Daniel Arndt [Fri, 27 Mar 2020 20:55:36 +0000 (16:55 -0400)]
Remove deprecated LAPACKFullMatrix::apply_lu_factorization

4 years agoMerge pull request #9750 from masterleinad/remove_deprecated_mg
Martin Kronbichler [Fri, 27 Mar 2020 19:15:21 +0000 (20:15 +0100)]
Merge pull request #9750 from masterleinad/remove_deprecated_mg

Remove deprecated Multigrid related constructors and functions

4 years agoMerge pull request #9751 from kronbichler/fix_link
Wolfgang Bangerth [Fri, 27 Mar 2020 18:54:36 +0000 (19:54 +0100)]
Merge pull request #9751 from kronbichler/fix_link

step-69: Refer to step-60 for parameter subscription topic

4 years agoRemove Triangulation::set_manifold() 9752/head
Daniel Arndt [Fri, 27 Mar 2020 16:19:57 +0000 (12:19 -0400)]
Remove Triangulation::set_manifold()

4 years agoMerge pull request #9749 from masterleinad/remove_deprecated_timer
Martin Kronbichler [Fri, 27 Mar 2020 17:53:03 +0000 (18:53 +0100)]
Merge pull request #9749 from masterleinad/remove_deprecated_timer

Remove deprecated Timer member functions

4 years agostep-69: Refer to step-60 for parameter subscription topic 9751/head
Martin Kronbichler [Fri, 27 Mar 2020 17:50:53 +0000 (18:50 +0100)]
step-69: Refer to step-60 for parameter subscription topic

4 years agoRemove deprecated Multigrid related constructors 9750/head
Daniel Arndt [Fri, 27 Mar 2020 14:56:21 +0000 (10:56 -0400)]
Remove deprecated Multigrid related constructors

4 years agoUse std::unique_ptr instead of std::shared_ptr.
Wolfgang Bangerth [Fri, 27 Mar 2020 15:37:49 +0000 (09:37 -0600)]
Use std::unique_ptr instead of std::shared_ptr.

4 years agoRemove deprecated Timer member functions 9749/head
Daniel Arndt [Fri, 27 Mar 2020 14:24:28 +0000 (10:24 -0400)]
Remove deprecated Timer member functions

4 years agoFix indent
Martin Kronbichler [Fri, 27 Mar 2020 14:57:41 +0000 (15:57 +0100)]
Fix indent

4 years agoFurther improve text
Martin Kronbichler [Fri, 27 Mar 2020 13:14:44 +0000 (14:14 +0100)]
Further improve text

4 years agoAvoid vectorization level
Martin Kronbichler [Fri, 27 Mar 2020 13:14:27 +0000 (14:14 +0100)]
Avoid vectorization level

4 years agoMerge pull request #4 from bangerth/step-67-b
Martin Kronbichler [Fri, 27 Mar 2020 12:53:15 +0000 (13:53 +0100)]
Merge pull request #4 from bangerth/step-67-b

More edits to the results section.

4 years agoMerge pull request #9655 from jwitte08/shape_info_refactor
Martin Kronbichler [Fri, 27 Mar 2020 12:48:24 +0000 (13:48 +0100)]
Merge pull request #9655 from jwitte08/shape_info_refactor

Refactor MatrixFreeFunctions::ShapeInfo

4 years agoMerge pull request #9733 from rezarastak/tests_using_namesapce_dealii
Martin Kronbichler [Fri, 27 Mar 2020 12:46:34 +0000 (13:46 +0100)]
Merge pull request #9733 from rezarastak/tests_using_namesapce_dealii

using namespace dealii is removed from tests that include ../tests.h

4 years agoMerge pull request #9732 from rezarastak/examples_remove_using_namespace
Martin Kronbichler [Fri, 27 Mar 2020 08:40:12 +0000 (09:40 +0100)]
Merge pull request #9732 from rezarastak/examples_remove_using_namespace

Remove unused "using namespace" directives in the tutorials.

4 years agoMerge pull request #9746 from masterleinad/remove_paramterhandler_print_sections
Martin Kronbichler [Fri, 27 Mar 2020 08:32:32 +0000 (09:32 +0100)]
Merge pull request #9746 from masterleinad/remove_paramterhandler_print_sections

Remove ParameterHandler::print_parameters_section

4 years agoMerge pull request #9747 from masterleinad/remove_partitioner_get_communicator
Martin Kronbichler [Fri, 27 Mar 2020 05:49:13 +0000 (06:49 +0100)]
Merge pull request #9747 from masterleinad/remove_partitioner_get_communicator

Remove Utilities::MPI::Partitioner::get_communicator()

4 years agousing namespace dealii is removed from tests that include ../tests.h 9733/head
Reza Rastak [Wed, 25 Mar 2020 17:55:53 +0000 (10:55 -0700)]
using namespace dealii is removed from tests that include ../tests.h

4 years agoRemove unnecessary "using namespace" directives from the tutorials. 9732/head
Reza Rastak [Wed, 25 Mar 2020 17:14:16 +0000 (10:14 -0700)]
Remove unnecessary "using namespace" directives from the tutorials.

4 years agoSmall edits to the step-67.cc file.
Wolfgang Bangerth [Fri, 27 Mar 2020 03:41:37 +0000 (21:41 -0600)]
Small edits to the step-67.cc file.

4 years agoMerge pull request #9727 from peterrum/mf_tree_improvement
Daniel Arndt [Fri, 27 Mar 2020 03:40:38 +0000 (23:40 -0400)]
Merge pull request #9727 from peterrum/mf_tree_improvement

Add improvements to the mf path graph

4 years agoMerge pull request #9734 from peterrum/hp_dofhandler_remove_get_fe
Daniel Arndt [Fri, 27 Mar 2020 03:38:39 +0000 (23:38 -0400)]
Merge pull request #9734 from peterrum/hp_dofhandler_remove_get_fe

Remove hp::DoFHandler::get_fe()

4 years agoMerge pull request #9742 from masterleinad/remove_all_normal
Wolfgang Bangerth [Fri, 27 Mar 2020 03:08:20 +0000 (04:08 +0100)]
Merge pull request #9742 from masterleinad/remove_all_normal

Remove FEValuesBase::get_all_normal_vectors

4 years agoMerge pull request #9745 from tjhei/clang10_warnings
Wolfgang Bangerth [Fri, 27 Mar 2020 03:05:15 +0000 (04:05 +0100)]
Merge pull request #9745 from tjhei/clang10_warnings

fix a couple of Clang 10 warnings

4 years agoMerge pull request #9705 from kronbichler/vectorization_name_bits
Timo Heister [Fri, 27 Mar 2020 00:47:13 +0000 (20:47 -0400)]
Merge pull request #9705 from kronbichler/vectorization_name_bits

Introduce DEAL_II_VECTORIZATION_WIDTH_IN_BITS

4 years agoAdd improvements to the mf path graph 9727/head
Peter Munch [Tue, 24 Mar 2020 21:58:04 +0000 (22:58 +0100)]
Add improvements to the mf path graph

4 years agoRemove hp::DoFHandler::get_fe() 9734/head
Peter Munch [Wed, 25 Mar 2020 20:47:31 +0000 (21:47 +0100)]
Remove hp::DoFHandler::get_fe()

4 years agoRemove Utilities::MPI::Partitioner::get_communicator() 9747/head
Daniel Arndt [Thu, 26 Mar 2020 23:05:59 +0000 (19:05 -0400)]
Remove Utilities::MPI::Partitioner::get_communicator()

4 years agoRemove FEValuesBase::get_all_normal_vectors 9742/head
Daniel Arndt [Thu, 26 Mar 2020 16:23:09 +0000 (12:23 -0400)]
Remove FEValuesBase::get_all_normal_vectors

4 years agoMerge pull request #9744 from masterleinad/remove_mglevelobject_clear
Daniel Arndt [Thu, 26 Mar 2020 22:40:34 +0000 (18:40 -0400)]
Merge pull request #9744 from masterleinad/remove_mglevelobject_clear

Remove MGLevelObject::clear()

4 years agoRemove ParameterHandler::print_section 9746/head
Daniel Arndt [Thu, 26 Mar 2020 16:08:55 +0000 (12:08 -0400)]
Remove ParameterHandler::print_section

4 years agoMore edits to the results section.
Wolfgang Bangerth [Thu, 26 Mar 2020 22:06:03 +0000 (16:06 -0600)]
More edits to the results section.


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