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https://gitweb.dealii.org/ - dealii.git/log
Daniel Arndt [Fri, 17 Jan 2020 06:37:39 +0000 (23:37 -0700)]
Merge pull request #9231 from kronbichler/inverse_mass_simplify
Simpler CellwiseInverseMassMatrix::apply() function
Daniel Arndt [Thu, 16 Jan 2020 20:25:26 +0000 (13:25 -0700)]
Merge pull request #9351 from masterleinad/remove_trailing_whitespace
Remove trailing whitespace
Timo Heister [Thu, 16 Jan 2020 19:11:29 +0000 (14:11 -0500)]
Merge pull request #9287 from bangerth/dataout
Replace the Dataout::first_cell/next_cell() mechanism
Daniel Arndt [Thu, 16 Jan 2020 17:17:46 +0000 (10:17 -0700)]
Add script
Daniel Arndt [Thu, 16 Jan 2020 16:15:44 +0000 (09:15 -0700)]
Remove trailing whitespace
Wolfgang Bangerth [Thu, 16 Jan 2020 16:26:36 +0000 (09:26 -0700)]
Observe that passing a lambda function to set_cell_selection() also works.
Wolfgang Bangerth [Wed, 15 Jan 2020 16:27:17 +0000 (09:27 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Thu, 16 Jan 2020 15:09:35 +0000 (08:09 -0700)]
Add tests.
Wolfgang Bangerth [Sat, 11 Jan 2020 22:37:06 +0000 (15:37 -0700)]
Replace the first_cell/next_cell mechanism in DataOut.
Wolfgang Bangerth [Sat, 11 Jan 2020 22:35:05 +0000 (15:35 -0700)]
Replace a text description by a static_assert().
Daniel Arndt [Thu, 16 Jan 2020 15:45:43 +0000 (08:45 -0700)]
Merge pull request #9096 from tamiko/mg_output
cleanup typedefs in DataOut
Daniel Arndt [Thu, 16 Jan 2020 14:57:59 +0000 (07:57 -0700)]
Merge pull request #9348 from kronbichler/typo_doc
Fix typo in step-49 doc about gmsh
Daniel Arndt [Thu, 9 Jan 2020 19:50:45 +0000 (14:50 -0500)]
Fix test
Martin Kronbichler [Thu, 16 Jan 2020 07:44:15 +0000 (08:44 +0100)]
Fix typo in step-49 doc about gmsh
Martin Kronbichler [Thu, 16 Jan 2020 07:12:13 +0000 (08:12 +0100)]
Merge pull request #9335 from bangerth/49
Simplify description in step-49.
Martin Kronbichler [Thu, 16 Jan 2020 07:11:02 +0000 (08:11 +0100)]
Merge pull request #9249 from masterleinad/replace_more_threads_mutex
Replace Threads::mutex by std::mutex
Martin Kronbichler [Thu, 16 Jan 2020 07:09:12 +0000 (08:09 +0100)]
Merge pull request #9344 from bangerth/6
Talk about mesh quality in step-6.
Martin Kronbichler [Thu, 16 Jan 2020 07:06:38 +0000 (08:06 +0100)]
Merge pull request #9345 from bangerth/49-2
Clarify comments about distort_random() in step-49.
Daniel Arndt [Thu, 16 Jan 2020 06:39:59 +0000 (23:39 -0700)]
Merge pull request #9346 from peterrum/exception_fix_type
Fix input argument type of ExcFileNotOpen()
Peter Munch [Thu, 16 Jan 2020 06:30:59 +0000 (07:30 +0100)]
Fix input arguemnt type of ExcFileNotOpen()
Wolfgang Bangerth [Thu, 16 Jan 2020 01:21:49 +0000 (18:21 -0700)]
Clarify comments about distort_random() in step-49.
Wolfgang Bangerth [Thu, 16 Jan 2020 00:39:40 +0000 (17:39 -0700)]
Talk about mesh quality in step-6.
Timo Heister [Wed, 15 Jan 2020 22:35:58 +0000 (17:35 -0500)]
Merge pull request #9327 from bangerth/gmsh
Better document gmsh's features.
Wolfgang Bangerth [Wed, 15 Jan 2020 16:18:45 +0000 (09:18 -0700)]
Simplify description in step-49.
Wolfgang Bangerth [Wed, 15 Jan 2020 00:15:29 +0000 (17:15 -0700)]
Better document gmsh's features.
David Wells [Wed, 15 Jan 2020 21:15:25 +0000 (16:15 -0500)]
Merge pull request #9288 from krishnakumarg1984/krishna_constraints_doc_fix
Update constraints documentation module to reflect recent updates to step-6
David Wells [Wed, 15 Jan 2020 21:09:52 +0000 (16:09 -0500)]
Merge pull request #9337 from masterleinad/fix_some_coverity
Fix some coverity complains
David Wells [Wed, 15 Jan 2020 21:03:35 +0000 (16:03 -0500)]
Merge pull request #9328 from bangerth/write-svg
Fix the instantiations of GridOut::write_svg().
David Wells [Wed, 15 Jan 2020 20:57:45 +0000 (15:57 -0500)]
Merge pull request #9340 from krishnakumarg1984/step49_fixes
Lots of documentation fixes to Step-49 tutorial
Krishnakumar Gopalakrishnan [Tue, 14 Jan 2020 18:05:30 +0000 (18:05 +0000)]
Lots of documentation fixes to Step-49 tutorial
aims to wrap create_coarse_grid function in monospace font
fixes a minor typo
trying to fix the monospace font of step-49.cc file
in step 49, simplify the boundary_count loop by directly using active_face_iterators
In step-49, updates the transform code to directly correspond 1:1 with the given math formula
semantic font use for code in step-49 results/extension
Fixes a documentation error. Move extract_boundary_mesh from GridTools to GridGenerator namespace in step-49
semantic font use for code in step-49 results/extension
Daniel Arndt [Wed, 15 Jan 2020 18:04:35 +0000 (11:04 -0700)]
Merge pull request #9272 from bangerth/deprecate
Make DoFTools::count_dofs_per_{component,block} return its data.
Wolfgang Bangerth [Wed, 15 Jan 2020 17:15:29 +0000 (10:15 -0700)]
Merge pull request #9300 from krishnakumarg1984/krishna_fix_step6_results
In step 6 results doc, move the header file inclusion sentence to reflect that we need it for Sparse_ILU and not Jacobi preconditioner
Daniel Arndt [Wed, 15 Jan 2020 16:52:53 +0000 (09:52 -0700)]
Merge pull request #9333 from bangerth/pre
Use @pre instead of @note in a number of places.
Daniel Arndt [Wed, 15 Jan 2020 16:14:00 +0000 (09:14 -0700)]
Fix some coverity complains
Timo Heister [Wed, 15 Jan 2020 16:21:47 +0000 (11:21 -0500)]
Merge pull request #9332 from bangerth/changelog
Add a changelog for step-71.
Wolfgang Bangerth [Wed, 15 Jan 2020 16:02:00 +0000 (09:02 -0700)]
Merge pull request #9331 from krishnakumarg1984/fix_gmsh_url
Fix url to the gmsh website
Wolfgang Bangerth [Wed, 15 Jan 2020 05:24:02 +0000 (22:24 -0700)]
Use @pre instead of @note in a number of places.
Wolfgang Bangerth [Wed, 15 Jan 2020 15:51:47 +0000 (08:51 -0700)]
Add a changelog for step-71.
Krishnakumar Gopalakrishnan [Wed, 15 Jan 2020 14:08:15 +0000 (14:08 +0000)]
Updates the www URL to gmsh website
Bruno Turcksin [Wed, 15 Jan 2020 13:36:21 +0000 (08:36 -0500)]
Add a set of new python wrappers (#9178)
Add a set of new python wrappers
Timo Heister [Wed, 15 Jan 2020 13:24:31 +0000 (08:24 -0500)]
Merge pull request #9329 from bangerth/hyperball
Better document an issue with curved boundaries.
Daniel Arndt [Wed, 15 Jan 2020 06:38:20 +0000 (23:38 -0700)]
Merge pull request #9297 from drwells/improve-deduplicate
Make GridTools::delete_duplicate_vertices() faster.
Wolfgang Bangerth [Wed, 15 Jan 2020 05:18:16 +0000 (22:18 -0700)]
Better document an issue of curved boundaries.
Daniel Arndt [Wed, 15 Jan 2020 04:54:17 +0000 (21:54 -0700)]
Merge pull request #9111 from bangerth/step-71
step-71: the biharmonic equation.
Wolfgang Bangerth [Wed, 15 Jan 2020 04:15:58 +0000 (21:15 -0700)]
Merge pull request #9326 from tjhei/tests_add_pack_unpack_07_output
add alternative output for tests/base/utilities_pack_unpack_07
Wolfgang Bangerth [Wed, 15 Jan 2020 01:03:24 +0000 (18:03 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Wed, 15 Jan 2020 01:01:43 +0000 (18:01 -0700)]
Fix the instantiations of GridOut::write_svg().
By accident, we didn't instantiate the <3,3> case and users consequently
get funny linker errors that they have a hard time interpreting. Fix this.
Wolfgang Bangerth [Wed, 15 Jan 2020 00:39:00 +0000 (17:39 -0700)]
Merge pull request #9301 from tjhei/half_hyper_shell_warning
GridGenerator::half_hyper_shell warning
Timo Heister [Tue, 14 Jan 2020 22:09:19 +0000 (17:09 -0500)]
add alternative output for tests/base/utilities_pack_unpack_07
Daniel Arndt [Tue, 14 Jan 2020 20:52:16 +0000 (13:52 -0700)]
Merge pull request #9318 from krishnakumarg1984/fix_l2_second_attempt_krishna
converts l_2 to LaTeX code
Timo Heister [Tue, 14 Jan 2020 19:01:50 +0000 (14:01 -0500)]
Merge pull request #9321 from bangerth/jump
Use the jump and average latex macros.
Wolfgang Bangerth [Tue, 14 Jan 2020 17:30:22 +0000 (10:30 -0700)]
Use the jump and average latex macros.
Timo Heister [Tue, 14 Jan 2020 17:15:24 +0000 (12:15 -0500)]
Merge pull request #9259 from simonsticko/high_deriv_jumps_fe_interface
Implement jump_hessian and jump_3rd_derivative on FEInterfaceValues.
Krishnakumar Gopalakrishnan [Tue, 14 Jan 2020 16:14:03 +0000 (16:14 +0000)]
converts l_2 to LaTeX code
David Wells [Tue, 14 Jan 2020 14:13:02 +0000 (09:13 -0500)]
Merge pull request #9313 from krishnakumarg1984/step6_krishna_fix_outdated_doc
In step6, removes outdated sentence on destructor
David Wells [Tue, 14 Jan 2020 14:12:09 +0000 (09:12 -0500)]
Merge pull request #9315 from krishnakumarg1984/step6_fix_gausspoint
In step 6, removes the documentation sentences relating to quadrature formula degree since already done in Step-5
Krishnakumar Gopalakrishnan [Tue, 14 Jan 2020 13:51:22 +0000 (13:51 +0000)]
In step 6, removes the documentation sentences relating to quadrature formula degree since already done in Step-5
Krishnakumar Gopalakrishnan [Tue, 14 Jan 2020 13:07:32 +0000 (13:07 +0000)]
In step6, removes outdated sentence on destructor
Alexander Grayver [Tue, 17 Dec 2019 11:26:09 +0000 (12:26 +0100)]
Add a set of new python wrappers
Martin Kronbichler [Tue, 14 Jan 2020 08:12:04 +0000 (09:12 +0100)]
Merge pull request #9280 from tjhei/mg_transfer_build
Multigrid Transfer cleanup
Daniel Arndt [Fri, 10 Jan 2020 22:13:12 +0000 (17:13 -0500)]
Revert classes without copy constructor
David Wells [Sun, 12 Jan 2020 04:35:08 +0000 (23:35 -0500)]
Make GridTools::delete_duplicate_vertices() faster.
This change makes this function, for cube-like geometries, O(n^(3/2)) in 2D and
O(n^(5/3)) in 3D rather than O(n^2) by presorting vertices by value in a single
component and then only comparing vertices which are nearby in that component.
Wolfgang Bangerth [Tue, 14 Jan 2020 00:34:14 +0000 (17:34 -0700)]
Apply David Well's comments.
Co-Authored-By: David Wells <drwells@email.unc.edu>
David Wells [Tue, 14 Jan 2020 01:18:38 +0000 (20:18 -0500)]
Merge pull request #9311 from bangerth/6
Add a few links to step-6.
Wolfgang Bangerth [Mon, 13 Jan 2020 23:08:23 +0000 (16:08 -0700)]
Correctly name the variable that denotes gamma/h.
Wolfgang Bangerth [Mon, 13 Jan 2020 23:06:49 +0000 (16:06 -0700)]
Address the comments by peterrum.
Zhuoran Wang [Thu, 2 Jan 2020 02:45:41 +0000 (10:45 +0800)]
Replace 2gamma in boundary_worker by gamma,and update tables.
Timo Heister [Tue, 24 Dec 2019 18:53:28 +0000 (13:53 -0500)]
add keywords
Wolfgang Bangerth [Tue, 24 Dec 2019 17:12:52 +0000 (10:12 -0700)]
Hook step-71 into the tutorial page.
Wolfgang Bangerth [Tue, 24 Dec 2019 14:44:15 +0000 (07:44 -0700)]
Only build on step-12 to avoid tutorial graph clutter.
Wolfgang Bangerth [Tue, 24 Dec 2019 14:13:56 +0000 (07:13 -0700)]
More edits for step-71, and also address Timo's comments.
Timo Heister [Mon, 23 Dec 2019 21:16:36 +0000 (16:16 -0500)]
small grammar fixes
Wolfgang Bangerth [Mon, 23 Dec 2019 05:16:59 +0000 (22:16 -0700)]
Write the remainder of the documentation.
Natasha S. Sharma [Mon, 23 Dec 2019 03:01:36 +0000 (20:01 -0700)]
Provide more material for the introduction.
Wolfgang Bangerth [Sun, 22 Dec 2019 20:05:47 +0000 (13:05 -0700)]
Document the remainder of the program.
Wolfgang Bangerth [Sun, 22 Dec 2019 19:30:28 +0000 (12:30 -0700)]
Very substantially accelerate the assembly.
Zhuoran Wang [Fri, 20 Dec 2019 07:08:51 +0000 (00:08 -0700)]
Verified step-71 uses the best penalty and corrected a typo
Wolfgang Bangerth [Thu, 19 Dec 2019 21:33:35 +0000 (14:33 -0700)]
Update results.dox
Zhuoran Wang [Thu, 19 Dec 2019 17:33:49 +0000 (10:33 -0700)]
Add initial version of results.dox
Wolfgang Bangerth [Thu, 5 Dec 2019 20:03:13 +0000 (13:03 -0700)]
Write most of the rest of the in-code documentation for step-71.
Timo Heister [Sat, 30 Nov 2019 17:23:29 +0000 (12:23 -0500)]
Several cleanups.
Wolfgang Bangerth [Sat, 30 Nov 2019 05:07:44 +0000 (22:07 -0700)]
Start with an introduction.
Wolfgang Bangerth [Sat, 30 Nov 2019 04:47:22 +0000 (21:47 -0700)]
Initial version of step-71 for the biharmonic equation.
Wolfgang Bangerth [Tue, 14 Jan 2020 00:28:17 +0000 (17:28 -0700)]
Add a few links to step-6.
David Wells [Mon, 13 Jan 2020 23:53:11 +0000 (18:53 -0500)]
Merge pull request #9310 from bangerth/disentangle
Disentangle the dependency graph some more.
Wolfgang Bangerth [Mon, 13 Jan 2020 23:16:59 +0000 (16:16 -0700)]
Disentangle the dependency graph some more.
Daniel Arndt [Fri, 10 Jan 2020 22:03:01 +0000 (17:03 -0500)]
Fix FESystem move constrcutor
Daniel Arndt [Tue, 7 Jan 2020 14:54:43 +0000 (09:54 -0500)]
Replace Threads::mutex by std::mutex
Wolfgang Bangerth [Mon, 13 Jan 2020 21:05:14 +0000 (14:05 -0700)]
Merge pull request #9304 from krishnakumarg1984/krishna_fix_minor_typo_step6
In step 6 doc, fixes a really minor grammar/typo
Daniel Arndt [Mon, 13 Jan 2020 20:09:09 +0000 (13:09 -0700)]
Merge pull request #9281 from tjhei/github-ci
use github CI for OSX
Krishnakumar Gopalakrishnan [Mon, 13 Jan 2020 19:29:01 +0000 (19:29 +0000)]
In step 6 doc, fixes a really minor grammar/typo
Daniel Arndt [Mon, 13 Jan 2020 18:23:28 +0000 (11:23 -0700)]
Merge pull request #9282 from tjhei/update_git_export
update .gitattributes
Krishnakumar Gopalakrishnan [Mon, 13 Jan 2020 13:38:57 +0000 (13:38 +0000)]
In step 6 results doc, move the header file inclusion sentence to reflect that we need it for Sparse_ILU and not Jacobi preconditioner
Addresses reviewers comments for the PR
Wolfgang Bangerth [Mon, 13 Jan 2020 17:49:03 +0000 (10:49 -0700)]
Merge pull request #9293 from krishnakumarg1984/step6_fixes_krishna
minor grammar fixes to step-6 tutorial doc
Timo Heister [Mon, 13 Jan 2020 16:00:44 +0000 (11:00 -0500)]
GridGenerator::half_hyper_shell warning
- remove unused variable warning in release mode
- document that n_cells is not used
Timo Heister [Fri, 10 Jan 2020 18:27:17 +0000 (13:27 -0500)]
update .gitattributes
- add .github/ and contrib/ci/ and Jenkinsfile to ignore list
- reorder things
Timo Heister [Mon, 13 Jan 2020 13:18:50 +0000 (08:18 -0500)]
Merge pull request #9286 from bangerth/jump-average
Introduce \jump and \average commands to be used in the documentation.
Timo Heister [Mon, 13 Jan 2020 13:18:17 +0000 (08:18 -0500)]
Merge pull request #9289 from peterrum/step18-removeinclude
Remove filtered_iterator include in step-18
Timo Heister [Mon, 13 Jan 2020 13:18:05 +0000 (08:18 -0500)]
Merge pull request #9291 from krishnakumarg1984/krishna_fix_kellyestimator_doc
In the doc for KellyErrorEstimator class, trying to fix couple of doxygen links
Krishnakumar Gopalakrishnan [Sun, 12 Jan 2020 17:01:45 +0000 (17:01 +0000)]
In the doc for KellyErrorEstimator class, trying to fix doxygen links to couple of functions in the GridRefinement namespace
fixes a typo (gradiend) in the documentation of KellyErrorEstimator class
Update include/deal.II/numerics/error_estimator.h
Co-Authored-By: Timo Heister <timo.heister@gmail.com>
Update include/deal.II/numerics/error_estimator.h
Co-Authored-By: Timo Heister <timo.heister@gmail.com>
trying to reindent the pull request
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