https://gitweb.dealii.org/ - dealii-svn.git/log

kanschat [Sun, 25 Sep 2011 20:23:04 +0000 (20:23 +0000)]

restructure member function list

git-svn-id: https://svn.dealii.org/trunk@24411 0785d39b-7218-0410-832d-ea1e28bc413d

bangerth [Sun, 25 Sep 2011 19:19:07 +0000 (19:19 +0000)]

Go through the parallelization on clusters section.

git-svn-id: https://svn.dealii.org/trunk@24409 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 25 Sep 2011 19:06:31 +0000 (19:06 +0000)]

More cross references.

git-svn-id: https://svn.dealii.org/trunk@24408 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 25 Sep 2011 18:10:56 +0000 (18:10 +0000)]

Add a couple entries.

git-svn-id: https://svn.dealii.org/trunk@24407 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 25 Sep 2011 18:09:17 +0000 (18:09 +0000)]

Remove a global function that apparently snuck in there by accident in r23944.

git-svn-id: https://svn.dealii.org/trunk@24406 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 24 Sep 2011 03:33:08 +0000 (03:33 +0000)]

Keep going through the introduction.

git-svn-id: https://svn.dealii.org/trunk@24403 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 24 Sep 2011 03:32:13 +0000 (03:32 +0000)]

Add a paragraph.

git-svn-id: https://svn.dealii.org/trunk@24402 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 21:49:09 +0000 (21:49 +0000)]

Add a whole bunch more.

git-svn-id: https://svn.dealii.org/trunk@24401 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 18:25:59 +0000 (18:25 +0000)]

Add necessary header file.

git-svn-id: https://svn.dealii.org/trunk@24400 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 18:23:54 +0000 (18:23 +0000)]

Allow compilation when using MPI but not p4est.

git-svn-id: https://svn.dealii.org/trunk@24399 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:42:15 +0000 (14:42 +0000)]

Write the solver section.

git-svn-id: https://svn.dealii.org/trunk@24398 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:32:23 +0000 (14:32 +0000)]

Uniformly use only initials.

git-svn-id: https://svn.dealii.org/trunk@24397 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:29:51 +0000 (14:29 +0000)]

Add two. Fix one spelling mistake.

git-svn-id: https://svn.dealii.org/trunk@24396 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 23 Sep 2011 14:07:30 +0000 (14:07 +0000)]

Add publication.

git-svn-id: https://svn.dealii.org/trunk@24395 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:05:12 +0000 (14:05 +0000)]

Add missing documentation of parameter.

git-svn-id: https://svn.dealii.org/trunk@24394 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:04:23 +0000 (14:04 +0000)]

Add missing doxygen marker.

git-svn-id: https://svn.dealii.org/trunk@24393 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 14:03:10 +0000 (14:03 +0000)]

Try not to confuse doxygen.

git-svn-id: https://svn.dealii.org/trunk@24392 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 13:25:15 +0000 (13:25 +0000)]

Use TrilinosWrappers::Vector::operator= instead of
TrilinosWrappers::Vector::reinit (., false, true).

git-svn-id: https://svn.dealii.org/trunk@24391 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 04:19:13 +0000 (04:19 +0000)]

Clarify.

git-svn-id: https://svn.dealii.org/trunk@24387 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 04:15:55 +0000 (04:15 +0000)]

A few more sentences.

git-svn-id: https://svn.dealii.org/trunk@24386 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 04:05:03 +0000 (04:05 +0000)]

Adjust indentation.

git-svn-id: https://svn.dealii.org/trunk@24385 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 03:54:11 +0000 (03:54 +0000)]

If possible use a compiler/assembler flag that allows compressing debug sections in object files, saving us about 230 MB of disk space.

git-svn-id: https://svn.dealii.org/trunk@24384 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 01:12:52 +0000 (01:12 +0000)]

Read through the first part of this.

git-svn-id: https://svn.dealii.org/trunk@24383 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 00:48:37 +0000 (00:48 +0000)]

Minor addition.

git-svn-id: https://svn.dealii.org/trunk@24382 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 00:18:59 +0000 (00:18 +0000)]

Make compile. Remove debug output.

git-svn-id: https://svn.dealii.org/trunk@24381 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 00:16:15 +0000 (00:16 +0000)]

Scale the pressure variable into physical units right after
solving. Scale the initial guess right before solving.

git-svn-id: https://svn.dealii.org/trunk@24380 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 00:04:16 +0000 (00:04 +0000)]

Wrap everything into a namespace Step32 as was done for all other
tutorial programs.

git-svn-id: https://svn.dealii.org/trunk@24379 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 23 Sep 2011 00:00:22 +0000 (00:00 +0000)]

A modest start to documenting.

git-svn-id: https://svn.dealii.org/trunk@24378 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 23:56:46 +0000 (23:56 +0000)]

Say something more.

git-svn-id: https://svn.dealii.org/trunk@24377 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 23:54:52 +0000 (23:54 +0000)]

Do something that may not be strictly necessary but helpful in
avoiding future errors.

git-svn-id: https://svn.dealii.org/trunk@24376 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 23:42:56 +0000 (23:42 +0000)]

Simplify code since we know that it runs under MPI.

git-svn-id: https://svn.dealii.org/trunk@24375 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 23:42:16 +0000 (23:42 +0000)]

Add comment.

git-svn-id: https://svn.dealii.org/trunk@24374 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 13:27:18 +0000 (13:27 +0000)]

Fix variable name.

git-svn-id: https://svn.dealii.org/trunk@24367 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 13:24:39 +0000 (13:24 +0000)]

Move variable declarations.

git-svn-id: https://svn.dealii.org/trunk@24366 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 12:40:54 +0000 (12:40 +0000)]

Leave a code block we may want to discuss.

git-svn-id: https://svn.dealii.org/trunk@24365 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 12:40:07 +0000 (12:40 +0000)]

Remove computation of divergences as debug output.

git-svn-id: https://svn.dealii.org/trunk@24364 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 04:01:53 +0000 (04:01 +0000)]

Remove duplicate assignment.

git-svn-id: https://svn.dealii.org/trunk@24363 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 03:57:26 +0000 (03:57 +0000)]

Remove code block used for debugging.

git-svn-id: https://svn.dealii.org/trunk@24362 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 03:56:27 +0000 (03:56 +0000)]

Indent by astyle. May undo that again later.

git-svn-id: https://svn.dealii.org/trunk@24361 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 22 Sep 2011 03:02:20 +0000 (03:02 +0000)]

Minor adjustments to make this program more similar with ASPECT before we
started to implement significantly new physics there.

git-svn-id: https://svn.dealii.org/trunk@24360 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 21 Sep 2011 19:55:43 +0000 (19:55 +0000)]

Reference step-21 at one place.

git-svn-id: https://svn.dealii.org/trunk@24358 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 21 Sep 2011 19:52:05 +0000 (19:52 +0000)]

Further correction.

git-svn-id: https://svn.dealii.org/trunk@24357 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 21 Sep 2011 19:51:26 +0000 (19:51 +0000)]

Grammar fix.

git-svn-id: https://svn.dealii.org/trunk@24356 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 21 Sep 2011 15:12:54 +0000 (15:12 +0000)]

Well, really. If we change something in 6 of the Makefiles, I'd say we should do it in all of them...

git-svn-id: https://svn.dealii.org/trunk@24352 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 21 Sep 2011 12:09:28 +0000 (12:09 +0000)]

Cleanup of computations of derivatives in Lagrange polynomial.

git-svn-id: https://svn.dealii.org/trunk@24350 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 21 Sep 2011 08:38:41 +0000 (08:38 +0000)]

Remove invalid .cc extension on targets.

git-svn-id: https://svn.dealii.org/trunk@24349 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 20 Sep 2011 19:07:29 +0000 (19:07 +0000)]

documentation of exceptions

git-svn-id: https://svn.dealii.org/trunk@24348 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 20 Sep 2011 19:00:45 +0000 (19:00 +0000)]

remove unnecessary header

git-svn-id: https://svn.dealii.org/trunk@24347 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 20 Sep 2011 19:00:04 +0000 (19:00 +0000)]

actually use inversion method in parameter object

git-svn-id: https://svn.dealii.org/trunk@24346 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 20 Sep 2011 18:59:15 +0000 (18:59 +0000)]

make target explicit in Makefile

git-svn-id: https://svn.dealii.org/trunk@24345 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 16 Sep 2011 01:02:05 +0000 (01:02 +0000)]

Add one.

git-svn-id: https://svn.dealii.org/trunk@24331 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 15 Sep 2011 21:09:17 +0000 (21:09 +0000)]

Fix default argument.

git-svn-id: https://svn.dealii.org/trunk@24330 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 15 Sep 2011 06:42:36 +0000 (06:42 +0000)]

Make compile.

git-svn-id: https://svn.dealii.org/trunk@24329 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 15 Sep 2011 05:58:54 +0000 (05:58 +0000)]

Ignore kdevelop custom include path files.

git-svn-id: https://svn.dealii.org/trunk@24328 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 15 Sep 2011 05:45:38 +0000 (05:45 +0000)]

Some formatting fixes.

git-svn-id: https://svn.dealii.org/trunk@24327 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 15 Sep 2011 05:43:25 +0000 (05:43 +0000)]

Also convert MatrixCreator, MatrixTools to namespaces.

git-svn-id: https://svn.dealii.org/trunk@24326 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 15 Sep 2011 05:28:30 +0000 (05:28 +0000)]

Make MatrixCreator a namespace.

git-svn-id: https://svn.dealii.org/trunk@24325 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 14 Sep 2011 23:56:36 +0000 (23:56 +0000)]

Make GridTools, VectorTools, MGTools namespaces, rather than a class with all static member functions. Now only MatrixTools remains.

git-svn-id: https://svn.dealii.org/trunk@24324 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 13 Sep 2011 15:48:31 +0000 (15:48 +0000)]

Fix name of test directory.

git-svn-id: https://svn.dealii.org/trunk@24323 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 13 Sep 2011 14:57:07 +0000 (14:57 +0000)]

Regenerate configure to by-pass errors with old versions of autoconf

git-svn-id: https://svn.dealii.org/trunk@24322 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 13 Sep 2011 09:54:45 +0000 (09:54 +0000)]

Update readme to reflect changes of previous patch

git-svn-id: https://svn.dealii.org/trunk@24321 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 13 Sep 2011 09:41:50 +0000 (09:41 +0000)]

Update bundle to provide deal.II <-> PETSc-3.2 compatibility

git-svn-id: https://svn.dealii.org/trunk@24320 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 13 Sep 2011 09:08:36 +0000 (09:08 +0000)]

Fix weird bug detecting PETSc 3.2 version numbers

git-svn-id: https://svn.dealii.org/trunk@24319 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 13 Sep 2011 02:45:11 +0000 (02:45 +0000)]

Add mesh converter test directory.

git-svn-id: https://svn.dealii.org/trunk@24317 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 13 Sep 2011 02:43:50 +0000 (02:43 +0000)]

Add a new test directory.

git-svn-id: https://svn.dealii.org/trunk@24316 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 13 Sep 2011 02:24:17 +0000 (02:24 +0000)]

Add a flag necessary for xlC.

git-svn-id: https://svn.dealii.org/trunk@24315 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 06:37:07 +0000 (06:37 +0000)]

Also re-link libraries if one of the extra-o and extra-g.o files have changed.

git-svn-id: https://svn.dealii.org/trunk@24313 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 05:40:54 +0000 (05:40 +0000)]

Stupid me: add another instantiation unnecessarily forgotten.

git-svn-id: https://svn.dealii.org/trunk@24312 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 05:32:37 +0000 (05:32 +0000)]

Restrict a test to where it's really necessary.

git-svn-id: https://svn.dealii.org/trunk@24311 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 05:30:59 +0000 (05:30 +0000)]

Add a dummy member function to the 1d case.

git-svn-id: https://svn.dealii.org/trunk@24310 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 05:24:11 +0000 (05:24 +0000)]

Add documentation to a function.

git-svn-id: https://svn.dealii.org/trunk@24309 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 01:27:16 +0000 (01:27 +0000)]

Fix an oversight.

git-svn-id: https://svn.dealii.org/trunk@24308 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 12 Sep 2011 01:27:06 +0000 (01:27 +0000)]

Assert that the file we read in fact exists.

git-svn-id: https://svn.dealii.org/trunk@24307 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 11 Sep 2011 18:13:23 +0000 (18:13 +0000)]

Avoid a race condition by making sure temp files are unique between runs with different numbers of processors.

git-svn-id: https://svn.dealii.org/trunk@24306 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 11 Sep 2011 17:56:41 +0000 (17:56 +0000)]

Delete temporary file after concatenating it to deallog.

git-svn-id: https://svn.dealii.org/trunk@24305 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 11 Sep 2011 05:44:26 +0000 (05:44 +0000)]

Use the cell->is_locally_owned() predicate introduced in the previous patch.

git-svn-id: https://svn.dealii.org/trunk@24304 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 11 Sep 2011 05:10:03 +0000 (05:10 +0000)]

Add a function cell->is_locally_owned.

git-svn-id: https://svn.dealii.org/trunk@24303 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 11 Sep 2011 04:26:13 +0000 (04:26 +0000)]

Fix markup.

git-svn-id: https://svn.dealii.org/trunk@24302 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Sat, 10 Sep 2011 18:01:38 +0000 (18:01 +0000)]

Additional data for SLEPcWrappers Arnoldi solver

git-svn-id: https://svn.dealii.org/trunk@24301 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Sat, 10 Sep 2011 10:21:59 +0000 (10:21 +0000)]

Catch another possible EPS failure

git-svn-id: https://svn.dealii.org/trunk@24300 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 10 Sep 2011 04:56:42 +0000 (04:56 +0000)]

Expand message issued in case of an error by stating where more information is hidden.

git-svn-id: https://svn.dealii.org/trunk@24299 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Fri, 9 Sep 2011 20:28:11 +0000 (20:28 +0000)]

add structure to documentation

git-svn-id: https://svn.dealii.org/trunk@24298 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 04:12:49 +0000 (04:12 +0000)]

Move things local to each program into a local namespace.

git-svn-id: https://svn.dealii.org/trunk@24297 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 04:04:21 +0000 (04:04 +0000)]

Remove 'typename' when not in a template.

git-svn-id: https://svn.dealii.org/trunk@24296 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 04:02:31 +0000 (04:02 +0000)]

Move things local to each program into a local namespace.

git-svn-id: https://svn.dealii.org/trunk@24295 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 03:57:13 +0000 (03:57 +0000)]

Use the standard form main() function.

git-svn-id: https://svn.dealii.org/trunk@24294 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 03:55:52 +0000 (03:55 +0000)]

Move things local to each program into a local namespace.

git-svn-id: https://svn.dealii.org/trunk@24293 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 03:20:13 +0000 (03:20 +0000)]

Use the main() function used by step-6 and forward, rather than the old and
unsafe one from step-4.

git-svn-id: https://svn.dealii.org/trunk@24292 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 03:17:50 +0000 (03:17 +0000)]

Move things local to each program into a local namespace.

git-svn-id: https://svn.dealii.org/trunk@24291 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Sep 2011 02:25:35 +0000 (02:25 +0000)]

New test.

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bangerth [Fri, 9 Sep 2011 02:24:14 +0000 (02:24 +0000)]

Add a comment.

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bangerth [Fri, 9 Sep 2011 02:23:06 +0000 (02:23 +0000)]

Patch by Daniel Castanon Quiroz: Implement generating a torus and describing the boundary.

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young [Thu, 8 Sep 2011 09:13:53 +0000 (09:13 +0000)]

Minor bug fix

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bangerth [Thu, 8 Sep 2011 04:43:50 +0000 (04:43 +0000)]

Lower tolerance.

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bangerth [Thu, 8 Sep 2011 03:31:09 +0000 (03:31 +0000)]

Add new test.

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bangerth [Thu, 8 Sep 2011 00:12:07 +0000 (00:12 +0000)]

Mark the conversion constructor explicit, to avoid any confusion.

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bangerth [Thu, 8 Sep 2011 00:10:27 +0000 (00:10 +0000)]

Add member functions that make the TLS object look more like the underlying object on the current thread.

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bangerth [Wed, 7 Sep 2011 23:58:11 +0000 (23:58 +0000)]

Add some more commentary.

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bangerth [Wed, 7 Sep 2011 23:21:05 +0000 (23:21 +0000)]

Fix by Patrick Sodre: FEFieldFunction was not thread-safe due to the cell_hint cache (a mutable variable) that different threads kept stomping on. This is now fixed using a thread-local variable.

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bangerth [Wed, 7 Sep 2011 22:29:45 +0000 (22:29 +0000)]

Have a way to escape expansion of step-xx in situations where we don't want to expand because in that context doxygen would not resolve the explicit reference. Use this mechanism in a bunch of places in the tutorial.

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