]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #9984 from tjhei/ci_tidy_allheaders
Daniel Arndt [Wed, 29 Apr 2020 23:27:09 +0000 (19:27 -0400)]
Merge pull request #9984 from tjhei/ci_tidy_allheaders

4 years agoMerge pull request #9264 from nicola-giuliani/cell_measure_non_planar_faces
Daniel Arndt [Wed, 29 Apr 2020 18:37:00 +0000 (14:37 -0400)]
Merge pull request #9264 from nicola-giuliani/cell_measure_non_planar_faces

4 years agoMerge pull request #9968 from marcfehling/precalc-fevalues
Wolfgang Bangerth [Wed, 29 Apr 2020 15:41:38 +0000 (17:41 +0200)]
Merge pull request #9968 from marcfehling/precalc-fevalues

Precalculate hp::FEValues.

4 years agoMerge pull request #9974 from masterleinad/restrict_petsc_test
David Wells [Wed, 29 Apr 2020 15:28:33 +0000 (11:28 -0400)]
Merge pull request #9974 from masterleinad/restrict_petsc_test

Restrict mpi/petsc_step-27

4 years agoPrecalculate hp::FEValues. 9968/head
Marc Fehling [Mon, 27 Apr 2020 14:09:00 +0000 (16:09 +0200)]
Precalculate hp::FEValues.

4 years agoupdated output 9264/head
Nicola Giuliani [Wed, 29 Apr 2020 07:24:51 +0000 (09:24 +0200)]
updated output

4 years agoMerge pull request #9983 from tjhei/rename_header_guards
Daniel Arndt [Wed, 29 Apr 2020 03:22:20 +0000 (23:22 -0400)]
Merge pull request #9983 from tjhei/rename_header_guards

4 years agoMerge pull request #9979 from simonsticko/constantFunctionHessian
Daniel Arndt [Wed, 29 Apr 2020 02:32:20 +0000 (22:32 -0400)]
Merge pull request #9979 from simonsticko/constantFunctionHessian

4 years agofix script 9984/head
Timo Heister [Tue, 28 Apr 2020 18:50:14 +0000 (14:50 -0400)]
fix script

4 years agoqualify namespace
Timo Heister [Tue, 28 Apr 2020 18:30:31 +0000 (14:30 -0400)]
qualify namespace

4 years agofix typo
Timo Heister [Tue, 28 Apr 2020 16:35:01 +0000 (12:35 -0400)]
fix typo

4 years agoclarify namespace
Timo Heister [Tue, 28 Apr 2020 16:34:34 +0000 (12:34 -0400)]
clarify namespace

4 years agoCI: clang-tidy all headers
Timo Heister [Mon, 27 Apr 2020 15:03:58 +0000 (11:03 -0400)]
CI: clang-tidy all headers

Hijack the already existing dummy.cc to include a dynamically created
header that includes all deal.II header files. This will run clang-tidy
on all headers.
I tried running clang-tidy on a .cc generated inside the build
directory, but this doesn't work for some reason.

closes #9933

4 years agoMerge pull request #9981 from tjhei/tidy_internal_namespace_qualify
Daniel Arndt [Wed, 29 Apr 2020 00:53:09 +0000 (20:53 -0400)]
Merge pull request #9981 from tjhei/tidy_internal_namespace_qualify

4 years agoMerge pull request #9980 from simonsticko/symmetricTensorErrorMessage
Daniel Arndt [Wed, 29 Apr 2020 00:52:53 +0000 (20:52 -0400)]
Merge pull request #9980 from simonsticko/symmetricTensorErrorMessage

4 years agoMerge pull request #9985 from drwells/remove-unused-headers
Daniel Arndt [Tue, 28 Apr 2020 22:43:23 +0000 (18:43 -0400)]
Merge pull request #9985 from drwells/remove-unused-headers

4 years agoRemove two unused headers. 9985/head
David Wells [Tue, 28 Apr 2020 16:53:16 +0000 (12:53 -0400)]
Remove two unused headers.

4 years agoImplement hessian and laplacian on ConstantFunction. 9979/head
Simon Sticko [Tue, 28 Apr 2020 14:33:43 +0000 (16:33 +0200)]
Implement hessian and laplacian on ConstantFunction.

4 years agorename header guards in noncontiguous_partitioner 9983/head
Timo Heister [Mon, 27 Apr 2020 19:10:32 +0000 (15:10 -0400)]
rename header guards in noncontiguous_partitioner

4 years agoqualify internal namespace with dealii:: 9981/head
Timo Heister [Tue, 28 Apr 2020 16:00:50 +0000 (12:00 -0400)]
qualify internal namespace with dealii::

Fix errors like:

/src/include/deal.II/lac/la_vector.templates.h:196:5: error: no member
named 'VectorOperations' in namespace 'dealii::LinearAlgebra::internal';
did you mean 'VectorOperation'? [clang-diagnostic-error]

that appear if some other internal namespace is included before
la_vector.templates.h

part of #9933

4 years agoImprove error message in SymmetricTensor constructor. 9980/head
Simon Sticko [Tue, 28 Apr 2020 15:05:19 +0000 (17:05 +0200)]
Improve error message in SymmetricTensor constructor.

4 years agoMerge pull request #9976 from masterleinad/fix_more_funny_spacing
Wolfgang Bangerth [Tue, 28 Apr 2020 14:49:03 +0000 (16:49 +0200)]
Merge pull request #9976 from masterleinad/fix_more_funny_spacing

Fix more funny spacings

4 years agoMerge pull request #9970 from tjhei/tidy_virtual_dtors
Daniel Arndt [Tue, 28 Apr 2020 12:55:38 +0000 (08:55 -0400)]
Merge pull request #9970 from tjhei/tidy_virtual_dtors

4 years agoMerge pull request #9975 from bangerth/space
Daniel Arndt [Tue, 28 Apr 2020 12:55:22 +0000 (08:55 -0400)]
Merge pull request #9975 from bangerth/space

4 years agoMerge pull request #9977 from rezarastak/remove_duplicate_includes
Daniel Arndt [Tue, 28 Apr 2020 12:55:01 +0000 (08:55 -0400)]
Merge pull request #9977 from rezarastak/remove_duplicate_includes

4 years agoMerge pull request #9967 from nfehn/data_out
Luca Heltai [Tue, 28 Apr 2020 11:48:45 +0000 (13:48 +0200)]
Merge pull request #9967 from nfehn/data_out

improve docu of DataOut::add_data_vector()

4 years agoRepeated include statements removed 9977/head
Reza Rastak [Tue, 28 Apr 2020 05:59:19 +0000 (22:59 -0700)]
Repeated include statements removed

4 years agoFix more funny spacings 9976/head
Daniel Arndt [Tue, 28 Apr 2020 03:05:16 +0000 (23:05 -0400)]
Fix more funny spacings

4 years agoFix a funny spacing issue. 9975/head
Wolfgang Bangerth [Tue, 28 Apr 2020 02:38:22 +0000 (20:38 -0600)]
Fix a funny spacing issue.

4 years agoMerge pull request #9964 from Rombur/cuda_assert_fix
Daniel Arndt [Tue, 28 Apr 2020 02:33:37 +0000 (22:33 -0400)]
Merge pull request #9964 from Rombur/cuda_assert_fix

4 years agoRestrict test 9974/head
Daniel Arndt [Tue, 28 Apr 2020 02:21:10 +0000 (22:21 -0400)]
Restrict test

4 years agoAssert kernels in MatrixFree 9964/head
Bruno Turcksin [Sun, 26 Apr 2020 23:54:52 +0000 (19:54 -0400)]
Assert kernels in MatrixFree

4 years agoIntroduce AssertCudaKernel to replace two calls to AssertCuda
Bruno Turcksin [Sun, 26 Apr 2020 23:11:37 +0000 (19:11 -0400)]
Introduce AssertCudaKernel to replace two calls to AssertCuda

4 years agoremove empty virtual destructors 9970/head
Timo Heister [Mon, 27 Apr 2020 19:08:04 +0000 (15:08 -0400)]
remove empty virtual destructors

reported by clang-tidy.

part of #9933

4 years agoMerge pull request #9966 from bangerth/58
Timo Heister [Mon, 27 Apr 2020 14:20:32 +0000 (10:20 -0400)]
Merge pull request #9966 from bangerth/58

Fix two formulas in step-58.

4 years agoimprove docu of DataOut::add_data_vector() 9967/head
Niklas Fehn [Mon, 27 Apr 2020 14:20:31 +0000 (16:20 +0200)]
improve docu of DataOut::add_data_vector()

4 years agoFix two formulas in step-58. 9966/head
Wolfgang Bangerth [Mon, 27 Apr 2020 14:09:00 +0000 (08:09 -0600)]
Fix two formulas in step-58.

4 years agoMerge pull request #9938 from rezarastak/remove_const_private_members
Daniel Arndt [Mon, 27 Apr 2020 02:08:51 +0000 (22:08 -0400)]
Merge pull request #9938 from rezarastak/remove_const_private_members

4 years agoMerge pull request #9963 from tjhei/test_tbb_lambda
Daniel Arndt [Mon, 27 Apr 2020 02:08:19 +0000 (22:08 -0400)]
Merge pull request #9963 from tjhei/test_tbb_lambda

4 years agoMerge pull request #9962 from peterrum/simplify_update_number_cache
Daniel Arndt [Sun, 26 Apr 2020 23:36:11 +0000 (19:36 -0400)]
Merge pull request #9962 from peterrum/simplify_update_number_cache

4 years agoMerge pull request #9892 from bangerth/step-58
Daniel Arndt [Sun, 26 Apr 2020 23:31:17 +0000 (19:31 -0400)]
Merge pull request #9892 from bangerth/step-58

4 years agoremove a std::bind by lambda 9963/head
Timo Heister [Sun, 26 Apr 2020 23:16:40 +0000 (19:16 -0400)]
remove a std::bind by lambda

part of #9930

4 years agoUse cudaPeekAtLastError() instead of cudaGetLastError() in AssertCuda
Bruno Turcksin [Sun, 26 Apr 2020 22:25:49 +0000 (18:25 -0400)]
Use cudaPeekAtLastError() instead of cudaGetLastError() in AssertCuda

cudaGetLastError reset the error code to success after being called.
Because the function is called multiple times in AssertCuda, the error
message is wrong.

4 years agoAdd a changelog entry. 9892/head
Wolfgang Bangerth [Sun, 26 Apr 2020 21:51:31 +0000 (15:51 -0600)]
Add a changelog entry.

4 years agoLeave references to step-58.
Wolfgang Bangerth [Sun, 26 Apr 2020 21:51:59 +0000 (15:51 -0600)]
Leave references to step-58.

4 years agoWrite the code for step-58.
Wolfgang Bangerth [Sun, 26 Apr 2020 21:51:15 +0000 (15:51 -0600)]
Write the code for step-58.

4 years agoWrite the results section of step-58.
Wolfgang Bangerth [Sun, 26 Apr 2020 21:51:01 +0000 (15:51 -0600)]
Write the results section of step-58.

4 years agoWrite the introduction of step-58.
Wolfgang Bangerth [Sun, 26 Apr 2020 21:50:45 +0000 (15:50 -0600)]
Write the introduction of step-58.

4 years agoProvide the infrastructure files for step-58.
Wolfgang Bangerth [Sun, 26 Apr 2020 21:50:24 +0000 (15:50 -0600)]
Provide the infrastructure files for step-58.

4 years agoMerge pull request #9951 from dougshidong/lin_op_trilinos_dealiivector
Martin Kronbichler [Sun, 26 Apr 2020 16:50:25 +0000 (18:50 +0200)]
Merge pull request #9951 from dougshidong/lin_op_trilinos_dealiivector

Allow LinOp<LA::dist::Vector>(TrilinosMatrix).

4 years agoSimplify parallel::TriangulationBase::update_number_cache 9962/head
Peter Munch [Sun, 26 Apr 2020 13:48:45 +0000 (15:48 +0200)]
Simplify parallel::TriangulationBase::update_number_cache

4 years agoMerge pull request #9944 from peterrum/compute_vertices_with_ghost_neighbors_follow_up
Martin Kronbichler [Sun, 26 Apr 2020 05:38:16 +0000 (07:38 +0200)]
Merge pull request #9944 from peterrum/compute_vertices_with_ghost_neighbors_follow_up

Create GridTools::compute_vertices_with_ghost_neighbors()

4 years agoMerge pull request #9958 from peterrum/pdt_remove_1D_hack
Martin Kronbichler [Sun, 26 Apr 2020 05:37:51 +0000 (07:37 +0200)]
Merge pull request #9958 from peterrum/pdt_remove_1D_hack

Remove 1D hack from p:d:t

4 years agoMerge pull request #9960 from masterleinad/fix_trilinos_block_reinit
Martin Kronbichler [Sun, 26 Apr 2020 05:37:04 +0000 (07:37 +0200)]
Merge pull request #9960 from masterleinad/fix_trilinos_block_reinit

Fix calling TrilinosWrappers::BlockSparseMatrix::reinit with BlockSparseMatrix

4 years agoAllow LinOp<LA::dist::Vector>(TrilinosMatrix). 9951/head
Doug Shi-Dong [Fri, 24 Apr 2020 17:12:52 +0000 (13:12 -0400)]
Allow LinOp<LA::dist::Vector>(TrilinosMatrix).

4 years agoMerge pull request #9936 from rezarastak/improve_booleans
Daniel Arndt [Sat, 25 Apr 2020 19:20:49 +0000 (15:20 -0400)]
Merge pull request #9936 from rezarastak/improve_booleans

4 years agoMerge pull request #9959 from peterrum/doxygen_copy_new_triangulation_to_p4est
Daniel Arndt [Sat, 25 Apr 2020 19:07:10 +0000 (15:07 -0400)]
Merge pull request #9959 from peterrum/doxygen_copy_new_triangulation_to_p4est

4 years agoMerge pull request #9956 from jppelteret/doc_boost_serialization_split_member
Jean-Paul Pelteret [Sat, 25 Apr 2020 17:54:08 +0000 (19:54 +0200)]
Merge pull request #9956 from jppelteret/doc_boost_serialization_split_member

Add documentation for hidden serialize() functions

4 years agoFix calling TrilinosWrappers::BlockSparseMatrix::reinit with BlockSparseMatrix 9960/head
Daniel Arndt [Sat, 25 Apr 2020 17:05:43 +0000 (13:05 -0400)]
Fix calling TrilinosWrappers::BlockSparseMatrix::reinit with BlockSparseMatrix

4 years agoFix doxygen appearance copy_new_triangulation_to_p4est 9959/head
Peter Munch [Sat, 25 Apr 2020 16:55:10 +0000 (18:55 +0200)]
Fix doxygen appearance copy_new_triangulation_to_p4est

4 years agoRemove 1D hack from p:d:t 9958/head
Peter Munch [Sat, 25 Apr 2020 15:44:45 +0000 (17:44 +0200)]
Remove 1D hack from p:d:t

4 years agoMerge pull request #9920 from masterleinad/remove_doc_doxygen_tutorial
Jean-Paul Pelteret [Sat, 25 Apr 2020 13:03:16 +0000 (15:03 +0200)]
Merge pull request #9920 from masterleinad/remove_doc_doxygen_tutorial

Remove doc/doxygen/tutorial

4 years agoAdd documentation for hidden serialize() functions 9956/head
Jean-Paul Pelteret [Sat, 25 Apr 2020 12:39:58 +0000 (14:39 +0200)]
Add documentation for hidden serialize() functions

4 years agoMerge pull request #9955 from masterleinad/remove_remaining_deprecations
Daniel Arndt [Sat, 25 Apr 2020 04:12:58 +0000 (00:12 -0400)]
Merge pull request #9955 from masterleinad/remove_remaining_deprecations

4 years agoMerge pull request #9952 from masterleinad/remove_range_partitioner
Wolfgang Bangerth [Sat, 25 Apr 2020 02:44:05 +0000 (04:44 +0200)]
Merge pull request #9952 from masterleinad/remove_range_partitioner

Remove domain_partitioner and range_partitioner from TrilinosWrappers

4 years agoMerge pull request #9949 from peterrum/pst_update_number_cache_private
Wolfgang Bangerth [Sat, 25 Apr 2020 02:20:16 +0000 (04:20 +0200)]
Merge pull request #9949 from peterrum/pst_update_number_cache_private

Make parallel::shared::Triangulation::update_number_cache private

4 years agoRemove the last deprecations 9955/head
Daniel Arndt [Fri, 24 Apr 2020 23:13:54 +0000 (19:13 -0400)]
Remove the last deprecations

4 years agoMerge pull request #9953 from kronbichler/fix_another_test
Daniel Arndt [Fri, 24 Apr 2020 23:10:58 +0000 (19:10 -0400)]
Merge pull request #9953 from kronbichler/fix_another_test

4 years agoImprove calculating boolean values 9936/head
Reza Rastak [Wed, 22 Apr 2020 02:49:43 +0000 (19:49 -0700)]
Improve calculating boolean values

4 years agoInclude ComponentMask in vector_tools_interpolate.h 9953/head
Martin Kronbichler [Fri, 24 Apr 2020 18:15:01 +0000 (20:15 +0200)]
Include ComponentMask in vector_tools_interpolate.h

4 years agoMerge pull request #9925 from peterrum/affine_constraints_instantiation
Martin Kronbichler [Fri, 24 Apr 2020 18:09:08 +0000 (20:09 +0200)]
Merge pull request #9925 from peterrum/affine_constraints_instantiation

Instantiate AffineConstraints::distribute_local_to_global

4 years agoMerge pull request #9943 from masterleinad/remove_trilinos_constructors
Martin Kronbichler [Fri, 24 Apr 2020 18:05:27 +0000 (20:05 +0200)]
Merge pull request #9943 from masterleinad/remove_trilinos_constructors

Remove deprecated TrilinosWrappers constructors and reinitializations

4 years agoRemove domain_partitioner and range_partitioner from TrilinosWrappers 9952/head
Daniel Arndt [Fri, 24 Apr 2020 17:11:40 +0000 (13:11 -0400)]
Remove domain_partitioner and range_partitioner from TrilinosWrappers

4 years agoMerge pull request #9946 from kronbichler/fix_tests-1
Daniel Arndt [Fri, 24 Apr 2020 12:50:20 +0000 (08:50 -0400)]
Merge pull request #9946 from kronbichler/fix_tests-1

4 years agoMake parallel::shared::Trinagulation::update_number_cache private 9949/head
Peter Munch [Fri, 24 Apr 2020 10:46:08 +0000 (12:46 +0200)]
Make parallel::shared::Trinagulation::update_number_cache private

4 years agoDo not run MF loop in parallel 9946/head
Martin Kronbichler [Fri, 24 Apr 2020 08:08:15 +0000 (10:08 +0200)]
Do not run MF loop in parallel

4 years agoInclude vector headers
Martin Kronbichler [Fri, 24 Apr 2020 08:07:39 +0000 (10:07 +0200)]
Include vector headers

4 years agoAdd some std headers for minimal bundled case
Martin Kronbichler [Fri, 24 Apr 2020 08:07:20 +0000 (10:07 +0200)]
Add some std headers for minimal bundled case

4 years agoMerge pull request #9929 from masterleinad/split_vectortools
Martin Kronbichler [Thu, 23 Apr 2020 21:57:17 +0000 (23:57 +0200)]
Merge pull request #9929 from masterleinad/split_vectortools

Split VectorTools up

4 years agoconst is removed from private member variables of DiscreteTime 9938/head
Reza Rastak [Wed, 22 Apr 2020 04:22:06 +0000 (21:22 -0700)]
const is removed from private member variables of DiscreteTime

4 years agoMerge pull request #9898 from bangerth/52-1
Daniel Arndt [Thu, 23 Apr 2020 16:20:21 +0000 (12:20 -0400)]
Merge pull request #9898 from bangerth/52-1

4 years agoMerge pull request #9748 from rezarastak/modify_step_21
Wolfgang Bangerth [Thu, 23 Apr 2020 15:37:23 +0000 (17:37 +0200)]
Merge pull request #9748 from rezarastak/modify_step_21

Improve DiscreteTime and use it in step 21

4 years agoMerge pull request #9919 from peterrum/OutputStyle
Luca Heltai [Thu, 23 Apr 2020 10:00:08 +0000 (12:00 +0200)]
Merge pull request #9919 from peterrum/OutputStyle

Extend OutputStyle

4 years agoMerge pull request #9941 from dangars/petsc_tvmult_changelog
Peter Munch [Thu, 23 Apr 2020 09:30:36 +0000 (11:30 +0200)]
Merge pull request #9941 from dangars/petsc_tvmult_changelog

Add changelog entry for "Add Tvmult to Petsc PreconditionJacobi"

4 years agoCreate GridTools::compute_vertices_with_ghost_neighbors() 9944/head
Peter Munch [Thu, 23 Apr 2020 06:45:25 +0000 (08:45 +0200)]
Create GridTools::compute_vertices_with_ghost_neighbors()

4 years agoAdd changelog entry 9941/head
Daniel Garcia-Sanchez [Thu, 23 Apr 2020 05:36:43 +0000 (07:36 +0200)]
Add changelog entry

This adds a changelog entry for the commit
"Add Tvmult to PETSc PreconditionerBase" c29092defe521e2093f83efdfb653253baada809

4 years agoChangelog entry 9943/head
Daniel Arndt [Thu, 23 Apr 2020 03:04:26 +0000 (23:04 -0400)]
Changelog entry

4 years agoRemove deprecated TrilinosWrappers constructors and reinitializations
Daniel Arndt [Thu, 23 Apr 2020 02:56:01 +0000 (22:56 -0400)]
Remove deprecated TrilinosWrappers constructors and reinitializations

4 years agoset_next_step_size is renamed to set_desired_next_step_size 9748/head
Reza Rastak [Sun, 19 Apr 2020 06:25:52 +0000 (23:25 -0700)]
set_next_step_size is renamed to set_desired_next_step_size

4 years agochangelog added for improvements to step-21
Reza Rastak [Fri, 27 Mar 2020 04:35:28 +0000 (21:35 -0700)]
changelog added for improvements to step-21

4 years agoStep-21 modified to use DiscreteTime
Reza Rastak [Thu, 26 Mar 2020 04:54:23 +0000 (21:54 -0700)]
Step-21 modified to use DiscreteTime

4 years agoNew const member functions added to DiscreteTime
Reza Rastak [Thu, 26 Mar 2020 05:52:43 +0000 (22:52 -0700)]
New const member functions added to DiscreteTime

4 years agoInstantiate AffineConstraints::distribute_local_to_global for TrilinosWrappers::Spars... 9925/head
Peter Munch [Sat, 18 Apr 2020 21:37:18 +0000 (23:37 +0200)]
Instantiate AffineConstraints::distribute_local_to_global for TrilinosWrappers::SparseMatrix and LinearAlgebra::distributed::Vector

4 years agoExtend OutputStyle 9919/head
Peter Munch [Fri, 17 Apr 2020 19:49:43 +0000 (21:49 +0200)]
Extend OutputStyle

4 years agoMerge pull request #9934 from bangerth/delete
Daniel Arndt [Wed, 22 Apr 2020 16:31:52 +0000 (12:31 -0400)]
Merge pull request #9934 from bangerth/delete

4 years agoMerge pull request #9940 from bangerth/typo
Timo Heister [Wed, 22 Apr 2020 15:28:10 +0000 (11:28 -0400)]
Merge pull request #9940 from bangerth/typo

Fix a typo.

4 years agoFix a typo. 9940/head
Wolfgang Bangerth [Wed, 22 Apr 2020 15:07:43 +0000 (09:07 -0600)]
Fix a typo.

4 years agoExplicitly =delete copy operators for TaskDescriptor. 9934/head
Wolfgang Bangerth [Tue, 21 Apr 2020 15:49:03 +0000 (09:49 -0600)]
Explicitly =delete copy operators for TaskDescriptor.

4 years agoUse smaller vector_tools files 9929/head
Daniel Arndt [Tue, 21 Apr 2020 23:04:31 +0000 (19:04 -0400)]
Use smaller vector_tools files

4 years agoSplit vector_tools.h
Daniel Arndt [Mon, 20 Apr 2020 16:35:42 +0000 (12:35 -0400)]
Split vector_tools.h


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