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https://gitweb.dealii.org/ - dealii-svn.git/log
kronbichler [Mon, 14 Dec 2009 10:51:47 +0000 (10:51 +0000)]
Mention changes in DoFTools.
git-svn-id: https://svn.dealii.org/trunk@20243
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kronbichler [Mon, 14 Dec 2009 10:41:53 +0000 (10:41 +0000)]
According to the documentation of DoFTools::distribute_cell_to_dof_vector, the old content in dof components that are not selected will not be changed. This has been implemented with r20238. The new result file respects this when entering a second round of distribute_cell_to_dof_vector on a different component.
git-svn-id: https://svn.dealii.org/trunk@20242
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bangerth [Sun, 13 Dec 2009 16:53:57 +0000 (16:53 +0000)]
Mention MPI.
git-svn-id: https://svn.dealii.org/trunk@20241
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bangerth [Sat, 12 Dec 2009 05:02:48 +0000 (05:02 +0000)]
Document Trilinos-10 installation.
git-svn-id: https://svn.dealii.org/trunk@20240
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bangerth [Fri, 11 Dec 2009 18:09:14 +0000 (18:09 +0000)]
Disable an assertion on systems that have a compiler bug.
git-svn-id: https://svn.dealii.org/trunk@20239
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kronbichler [Fri, 11 Dec 2009 16:33:04 +0000 (16:33 +0000)]
Simplify one more function with the internal extract_dofs_by_component function.
git-svn-id: https://svn.dealii.org/trunk@20238
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bangerth [Fri, 11 Dec 2009 15:53:22 +0000 (15:53 +0000)]
Simplify testcase.
git-svn-id: https://svn.dealii.org/trunk@20237
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bangerth [Fri, 11 Dec 2009 14:16:34 +0000 (14:16 +0000)]
Fix a couple typos.
git-svn-id: https://svn.dealii.org/trunk@20236
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bangerth [Fri, 11 Dec 2009 13:54:46 +0000 (13:54 +0000)]
Add a test to detect a bug on some Darwin systems where dynamic casts don't work.
git-svn-id: https://svn.dealii.org/trunk@20235
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bangerth [Fri, 11 Dec 2009 04:46:22 +0000 (04:46 +0000)]
Avoid warnings.
git-svn-id: https://svn.dealii.org/trunk@20230
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bangerth [Fri, 11 Dec 2009 01:19:47 +0000 (01:19 +0000)]
Mention new boost.
git-svn-id: https://svn.dealii.org/trunk@20229
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bangerth [Fri, 11 Dec 2009 01:16:12 +0000 (01:16 +0000)]
Avoid compiler warnings.
git-svn-id: https://svn.dealii.org/trunk@20228
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bangerth [Fri, 11 Dec 2009 01:13:00 +0000 (01:13 +0000)]
Avoid compiler warning.
git-svn-id: https://svn.dealii.org/trunk@20227
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bangerth [Fri, 11 Dec 2009 01:08:21 +0000 (01:08 +0000)]
Use boost 1.41.
git-svn-id: https://svn.dealii.org/trunk@20226
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bangerth [Fri, 11 Dec 2009 01:06:50 +0000 (01:06 +0000)]
Import boost 1.41.
git-svn-id: https://svn.dealii.org/trunk@20225
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kronbichler [Thu, 10 Dec 2009 16:17:50 +0000 (16:17 +0000)]
One more output file that is different now with the corrected counting of dofs per component.
git-svn-id: https://svn.dealii.org/trunk@20224
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kronbichler [Wed, 9 Dec 2009 18:18:37 +0000 (18:18 +0000)]
Fix include file.
git-svn-id: https://svn.dealii.org/trunk@20222
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kronbichler [Wed, 9 Dec 2009 18:18:12 +0000 (18:18 +0000)]
Fix output of tests that produced wrong results with the old counting function of DoFs on certain components.
git-svn-id: https://svn.dealii.org/trunk@20221
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kronbichler [Wed, 9 Dec 2009 18:12:05 +0000 (18:12 +0000)]
Cleanup of operator = (double).
git-svn-id: https://svn.dealii.org/trunk@20220
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kronbichler [Wed, 9 Dec 2009 18:11:22 +0000 (18:11 +0000)]
Correct counting of dofs per component. Improve speed of counting dofs per component. Correct bug in extract_constant_modes.
git-svn-id: https://svn.dealii.org/trunk@20219
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kronbichler [Wed, 9 Dec 2009 10:29:32 +0000 (10:29 +0000)]
Fix stupid bug in operator=(double).
git-svn-id: https://svn.dealii.org/trunk@20218
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kronbichler [Tue, 8 Dec 2009 17:07:06 +0000 (17:07 +0000)]
Fix error with IndexSet.
git-svn-id: https://svn.dealii.org/trunk@20214
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kronbichler [Tue, 8 Dec 2009 16:02:22 +0000 (16:02 +0000)]
Implement an interface row_begin and row_end that all the non-blocked sparsity patterns share. This simplifies some copy_from functions, where we now only need one implementation and no specializations. Also use an empty IndexSet for CompressedSimpleSparsity when we work in serial.
git-svn-id: https://svn.dealii.org/trunk@20212
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kronbichler [Tue, 8 Dec 2009 08:19:24 +0000 (08:19 +0000)]
Add an initialization function of a Trilinos AMG preconditioner with Teuchos::ParameterList for setting all the ML parameters.
git-svn-id: https://svn.dealii.org/trunk@20211
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bangerth [Tue, 8 Dec 2009 04:28:19 +0000 (04:28 +0000)]
Conditionalize the workaround for the Trilinos crash on not being on Mac OS X.
git-svn-id: https://svn.dealii.org/trunk@20210
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kanschat [Mon, 7 Dec 2009 22:39:12 +0000 (22:39 +0000)]
make base class public
git-svn-id: https://svn.dealii.org/trunk@20209
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kanschat [Mon, 7 Dec 2009 21:18:36 +0000 (21:18 +0000)]
add missing clone to FE_FaceQ
git-svn-id: https://svn.dealii.org/trunk@20208
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bangerth [Fri, 4 Dec 2009 15:12:15 +0000 (15:12 +0000)]
Fix include guard.
git-svn-id: https://svn.dealii.org/trunk@20202
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kronbichler [Fri, 4 Dec 2009 14:48:02 +0000 (14:48 +0000)]
Set svn properties on hp/fe_nothing_03. Do not output the results of deal.II/mesh_worker_01.
git-svn-id: https://svn.dealii.org/trunk@20201
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kronbichler [Fri, 4 Dec 2009 11:49:50 +0000 (11:49 +0000)]
Fix the distclean command.
git-svn-id: https://svn.dealii.org/trunk@20200
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kronbichler [Fri, 4 Dec 2009 08:45:54 +0000 (08:45 +0000)]
Avoid compiler warning.
git-svn-id: https://svn.dealii.org/trunk@20199
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bangerth [Thu, 3 Dec 2009 23:16:26 +0000 (23:16 +0000)]
Make sure it also compiles :-(
git-svn-id: https://svn.dealii.org/trunk@20198
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bangerth [Thu, 3 Dec 2009 23:15:55 +0000 (23:15 +0000)]
Optimize get_view a bit.
git-svn-id: https://svn.dealii.org/trunk@20197
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bangerth [Wed, 2 Dec 2009 19:24:48 +0000 (19:24 +0000)]
Fix bug.
git-svn-id: https://svn.dealii.org/trunk@20196
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kanschat [Wed, 2 Dec 2009 04:12:15 +0000 (04:12 +0000)]
step 39 running
git-svn-id: https://svn.dealii.org/trunk@20195
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bangerth [Mon, 30 Nov 2009 20:04:54 +0000 (20:04 +0000)]
Mark an input argument as const.
git-svn-id: https://svn.dealii.org/trunk@20187
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kanschat [Sat, 28 Nov 2009 04:42:33 +0000 (04:42 +0000)]
MeshWorker::Assembler::MGMatrixSimple bug fixed
git-svn-id: https://svn.dealii.org/trunk@20182
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bangerth [Fri, 27 Nov 2009 17:05:45 +0000 (17:05 +0000)]
Make output look more uniform.
git-svn-id: https://svn.dealii.org/trunk@20173
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kronbichler [Fri, 27 Nov 2009 14:35:22 +0000 (14:35 +0000)]
Fix problem in debug mode with block matrices. Further simplify the data structures for collecting the local constraints.
git-svn-id: https://svn.dealii.org/trunk@20172
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kronbichler [Thu, 26 Nov 2009 12:28:34 +0000 (12:28 +0000)]
Apply changes from the distributed grid branch: Improve functions in IndexSet. Constructor for ConstraintMatrix with IndexSet. Rewrote code for local_to_global functions in order to make it more accessible. Provide some shortcut for deal.II matrices.
git-svn-id: https://svn.dealii.org/trunk@20170
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kronbichler [Wed, 25 Nov 2009 19:01:30 +0000 (19:01 +0000)]
Make program compile with gcc4.4.
git-svn-id: https://svn.dealii.org/trunk@20169
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kronbichler [Wed, 25 Nov 2009 16:46:01 +0000 (16:46 +0000)]
Small fix in collective add operation that does not crash when writing non-existing entries.
git-svn-id: https://svn.dealii.org/trunk@20168
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kanschat [Wed, 25 Nov 2009 06:49:06 +0000 (06:49 +0000)]
L-shaped domain again
git-svn-id: https://svn.dealii.org/trunk@20167
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kanschat [Wed, 25 Nov 2009 06:46:09 +0000 (06:46 +0000)]
add group MeshWorker
git-svn-id: https://svn.dealii.org/trunk@20166
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kanschat [Wed, 25 Nov 2009 06:45:10 +0000 (06:45 +0000)]
consistency bug removed
git-svn-id: https://svn.dealii.org/trunk@20165
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kanschat [Wed, 25 Nov 2009 05:22:16 +0000 (05:22 +0000)]
add FE_FaceQ and FE_PolyFace for testing
git-svn-id: https://svn.dealii.org/trunk@20164
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kanschat [Wed, 25 Nov 2009 04:25:16 +0000 (04:25 +0000)]
add QProjector::project_to_all_children
git-svn-id: https://svn.dealii.org/trunk@20163
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kanschat [Wed, 25 Nov 2009 04:24:45 +0000 (04:24 +0000)]
add dimension info
git-svn-id: https://svn.dealii.org/trunk@20162
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kanschat [Tue, 24 Nov 2009 22:54:51 +0000 (22:54 +0000)]
introduce dimension variable in polynomial spaces and use in FE_Poly
git-svn-id: https://svn.dealii.org/trunk@20161
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kanschat [Tue, 24 Nov 2009 22:31:23 +0000 (22:31 +0000)]
fix MGMatrixSimple::assemble
git-svn-id: https://svn.dealii.org/trunk@20160
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bangerth [Tue, 24 Nov 2009 03:25:41 +0000 (03:25 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@20159
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kronbichler [Tue, 24 Nov 2009 00:03:32 +0000 (00:03 +0000)]
Add a check for translation of vertices by mapping. Use this to improve DataOut.
git-svn-id: https://svn.dealii.org/trunk@20158
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bangerth [Mon, 23 Nov 2009 23:05:40 +0000 (23:05 +0000)]
Undo previous checkin: I had not quite realized the meaning of the open_mode parameter.
git-svn-id: https://svn.dealii.org/trunk@20157
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kronbichler [Mon, 23 Nov 2009 22:25:27 +0000 (22:25 +0000)]
Fix comments.
git-svn-id: https://svn.dealii.org/trunk@20156
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kronbichler [Mon, 23 Nov 2009 18:15:25 +0000 (18:15 +0000)]
Remove an implementation of a Stokes preconditioner that was too specific and never really worked.
git-svn-id: https://svn.dealii.org/trunk@20154
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kronbichler [Mon, 23 Nov 2009 05:37:07 +0000 (05:37 +0000)]
Improve description of set function and say that setting can only be done once if there is no sparsity pattern.
git-svn-id: https://svn.dealii.org/trunk@20153
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kronbichler [Mon, 23 Nov 2009 05:36:02 +0000 (05:36 +0000)]
Fix some more Trilinos tests. Currently, the Bicgstab and the TFQMR solver fail, but that seems to be Trilinos' fault.
git-svn-id: https://svn.dealii.org/trunk@20152
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bangerth [Mon, 23 Nov 2009 04:45:01 +0000 (04:45 +0000)]
In n_active_cells(), use the cached values.
git-svn-id: https://svn.dealii.org/trunk@20150
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bangerth [Mon, 23 Nov 2009 04:06:17 +0000 (04:06 +0000)]
Cache Triangulation::n_levels().
git-svn-id: https://svn.dealii.org/trunk@20149
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kronbichler [Mon, 23 Nov 2009 02:42:08 +0000 (02:42 +0000)]
Fix one more output.
git-svn-id: https://svn.dealii.org/trunk@20148
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kronbichler [Mon, 23 Nov 2009 02:35:34 +0000 (02:35 +0000)]
Fix some compiling problems. Fix sparse matrix iterator.
git-svn-id: https://svn.dealii.org/trunk@20147
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kronbichler [Mon, 23 Nov 2009 02:35:00 +0000 (02:35 +0000)]
Cleanup Trilinos tests.
git-svn-id: https://svn.dealii.org/trunk@20146
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kronbichler [Sun, 22 Nov 2009 15:46:46 +0000 (15:46 +0000)]
Remove a few compiler warnings.
git-svn-id: https://svn.dealii.org/trunk@20145
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kronbichler [Thu, 19 Nov 2009 20:48:41 +0000 (20:48 +0000)]
Can use a smarter process for creating an IndexSet. Use this in step-32. Provide initializations of block vectors and matrices with std::vector<IndexSet>.
git-svn-id: https://svn.dealii.org/trunk@20140
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bangerth [Thu, 19 Nov 2009 04:51:25 +0000 (04:51 +0000)]
Add missing include file.
git-svn-id: https://svn.dealii.org/trunk@20138
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bangerth [Thu, 19 Nov 2009 04:25:56 +0000 (04:25 +0000)]
Another test.
git-svn-id: https://svn.dealii.org/trunk@20137
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bangerth [Thu, 19 Nov 2009 04:20:31 +0000 (04:20 +0000)]
IndexSet::operator==/!= and operator &.
git-svn-id: https://svn.dealii.org/trunk@20136
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bangerth [Thu, 19 Nov 2009 04:19:56 +0000 (04:19 +0000)]
A simpler way to deal with testing a file's existence.
git-svn-id: https://svn.dealii.org/trunk@20135
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bangerth [Thu, 19 Nov 2009 01:17:26 +0000 (01:17 +0000)]
Add parentheses around expressions to avoid warning.
git-svn-id: https://svn.dealii.org/trunk@20134
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kronbichler [Thu, 19 Nov 2009 01:15:06 +0000 (01:15 +0000)]
Forgot to fix one more problem.
git-svn-id: https://svn.dealii.org/trunk@20133
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kronbichler [Thu, 19 Nov 2009 01:08:24 +0000 (01:08 +0000)]
Avoid compile problem with std::pow by static_cast of the exponent to int.
git-svn-id: https://svn.dealii.org/trunk@20132
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bangerth [Wed, 18 Nov 2009 19:09:57 +0000 (19:09 +0000)]
Use numbers::PI instead of M_PI.
git-svn-id: https://svn.dealii.org/trunk@20130
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bangerth [Wed, 18 Nov 2009 18:38:41 +0000 (18:38 +0000)]
Add to xrefs.
git-svn-id: https://svn.dealii.org/trunk@20129
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kronbichler [Wed, 18 Nov 2009 16:58:22 +0000 (16:58 +0000)]
Include missing inline declaration of function.
git-svn-id: https://svn.dealii.org/trunk@20128
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kronbichler [Wed, 18 Nov 2009 02:14:36 +0000 (02:14 +0000)]
Use IndexSet instead of Epetra_Map. This avoids using Trilinos-specific structures and makes the code more generic.
git-svn-id: https://svn.dealii.org/trunk@20127
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bangerth [Mon, 16 Nov 2009 14:19:50 +0000 (14:19 +0000)]
Use a different variable name to avoid hiding a member of the class (and
generating a warning with Sun CC).
git-svn-id: https://svn.dealii.org/trunk@20120
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bangerth [Mon, 16 Nov 2009 14:08:09 +0000 (14:08 +0000)]
Qualify fabs and sqrt properly with std::.
git-svn-id: https://svn.dealii.org/trunk@20119
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bangerth [Mon, 16 Nov 2009 14:07:23 +0000 (14:07 +0000)]
Include missing header file.
git-svn-id: https://svn.dealii.org/trunk@20118
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bangerth [Mon, 16 Nov 2009 14:05:26 +0000 (14:05 +0000)]
Qualify sscanf properly with std::.
git-svn-id: https://svn.dealii.org/trunk@20117
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bangerth [Mon, 16 Nov 2009 14:00:55 +0000 (14:00 +0000)]
Qualify fabs properly with std::.
git-svn-id: https://svn.dealii.org/trunk@20116
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bangerth [Mon, 16 Nov 2009 14:00:07 +0000 (14:00 +0000)]
Qualify fabs properly with std::.
git-svn-id: https://svn.dealii.org/trunk@20115
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kronbichler [Fri, 13 Nov 2009 22:07:05 +0000 (22:07 +0000)]
Clean up parts of the code.
git-svn-id: https://svn.dealii.org/trunk@20112
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kronbichler [Fri, 13 Nov 2009 21:13:36 +0000 (21:13 +0000)]
Cleanup Trilinos matrix: Small update in comments. Do not provide functions that cannot reasonably implemented like the check for symmetry. Implement memory consumption.
git-svn-id: https://svn.dealii.org/trunk@20111
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kronbichler [Fri, 13 Nov 2009 16:04:45 +0000 (16:04 +0000)]
Cleanup Trilinos sparsity pattern. Make Slepc compile again.
git-svn-id: https://svn.dealii.org/trunk@20108
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kronbichler [Fri, 13 Nov 2009 15:40:05 +0000 (15:40 +0000)]
Apply some updates that have been developed in the distributed grid branch: reinit option with IndexSet for Trilinos vectors and matrices. Rearrangements of header files for Trilinos and PETSc.
git-svn-id: https://svn.dealii.org/trunk@20107
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kronbichler [Thu, 12 Nov 2009 23:16:40 +0000 (23:16 +0000)]
Move Quadrature::get_points() ad Quadrature::get_weights() functions to .h-file. This resolves a linker problem.
git-svn-id: https://svn.dealii.org/trunk@20105
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young [Thu, 12 Nov 2009 16:23:25 +0000 (16:23 +0000)]
Fixed an error message. If SLEPc was not detected, we say so here
git-svn-id: https://svn.dealii.org/trunk@20098
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bangerth [Thu, 12 Nov 2009 14:56:26 +0000 (14:56 +0000)]
Add.
git-svn-id: https://svn.dealii.org/trunk@20094
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kronbichler [Wed, 11 Nov 2009 20:25:51 +0000 (20:25 +0000)]
Two tiny updates.
git-svn-id: https://svn.dealii.org/trunk@20091
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bangerth [Wed, 11 Nov 2009 16:03:55 +0000 (16:03 +0000)]
Add new tests. They may fail currently, but my machine is wiped clean and so I want to get them into the archive. Will look later what to do with them.
git-svn-id: https://svn.dealii.org/trunk@20090
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kanschat [Wed, 11 Nov 2009 13:23:09 +0000 (13:23 +0000)]
working on inconsistency
git-svn-id: https://svn.dealii.org/trunk@20089
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bangerth [Tue, 10 Nov 2009 19:31:33 +0000 (19:31 +0000)]
Add.
git-svn-id: https://svn.dealii.org/trunk@20082
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kanschat [Tue, 10 Nov 2009 04:11:40 +0000 (04:11 +0000)]
assemble global system without adaptivity
git-svn-id: https://svn.dealii.org/trunk@20081
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kanschat [Tue, 10 Nov 2009 02:27:08 +0000 (02:27 +0000)]
create directory and file for step 39
git-svn-id: https://svn.dealii.org/trunk@20080
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kronbichler [Mon, 9 Nov 2009 18:50:16 +0000 (18:50 +0000)]
Avoid double instantiations in case vector iterators are just plain pointers.
git-svn-id: https://svn.dealii.org/trunk@20078
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bangerth [Mon, 9 Nov 2009 17:20:07 +0000 (17:20 +0000)]
Add a test to see if vector iterators are just plain pointers.
git-svn-id: https://svn.dealii.org/trunk@20077
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bangerth [Mon, 9 Nov 2009 17:14:32 +0000 (17:14 +0000)]
Fix comment.
git-svn-id: https://svn.dealii.org/trunk@20076
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kronbichler [Mon, 9 Nov 2009 16:47:40 +0000 (16:47 +0000)]
Remove nonsensical "inline".
git-svn-id: https://svn.dealii.org/trunk@20075
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kronbichler [Mon, 9 Nov 2009 15:29:24 +0000 (15:29 +0000)]
Use similar names for entering/leaving sectios in TimerOutput as ParameterHandler does. Fix output issue.
git-svn-id: https://svn.dealii.org/trunk@20074
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kronbichler [Sun, 8 Nov 2009 20:12:21 +0000 (20:12 +0000)]
Avoid ambiguity in calculation of square root in Chebyshev preconditioner.
git-svn-id: https://svn.dealii.org/trunk@20073
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