]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoRemove deprecated TrilinosWrappers constructors and reinitializations
Daniel Arndt [Thu, 23 Apr 2020 02:56:01 +0000 (22:56 -0400)]
Remove deprecated TrilinosWrappers constructors and reinitializations

4 years agoMerge pull request #9932 from tjhei/tidy_clang10fixes
Wolfgang Bangerth [Tue, 21 Apr 2020 17:33:09 +0000 (19:33 +0200)]
Merge pull request #9932 from tjhei/tidy_clang10fixes

small clang-tidy fix

4 years agosmall clang-tidy fix 9932/head
Timo Heister [Tue, 21 Apr 2020 15:02:54 +0000 (11:02 -0400)]
small clang-tidy fix

4 years agoMerge pull request #9924 from drwells/improve-compilation-times
Timo Heister [Mon, 20 Apr 2020 22:25:50 +0000 (18:25 -0400)]
Merge pull request #9924 from drwells/improve-compilation-times

Improve compilation times

4 years agoMerge pull request #9927 from rezarastak/clang_tidy_enhance
Timo Heister [Mon, 20 Apr 2020 17:19:48 +0000 (13:19 -0400)]
Merge pull request #9927 from rezarastak/clang_tidy_enhance

Clang tidy 9.0 fixes

4 years agoMerge pull request #9912 from tjhei/doc_workload
Wolfgang Bangerth [Mon, 20 Apr 2020 16:23:23 +0000 (18:23 +0200)]
Merge pull request #9912 from tjhei/doc_workload

documentation: workload_imbalance

4 years agoMerge pull request #9926 from peterrum/tutorials_default
Daniel Arndt [Mon, 20 Apr 2020 15:52:52 +0000 (11:52 -0400)]
Merge pull request #9926 from peterrum/tutorials_default

4 years agoMerge pull request #9922 from masterleinad/build_documentation
Timo Heister [Mon, 20 Apr 2020 15:13:40 +0000 (11:13 -0400)]
Merge pull request #9922 from masterleinad/build_documentation

Build and check documentation in CI

4 years agoremove some checks in clang-tidy config 9927/head
Reza Rastak [Mon, 20 Apr 2020 04:15:47 +0000 (21:15 -0700)]
remove some checks in clang-tidy config

4 years agoseveral improvements done based on clang-tidy 9.0 suggestions
Reza Rastak [Mon, 20 Apr 2020 04:09:36 +0000 (21:09 -0700)]
several improvements done based on clang-tidy 9.0 suggestions

4 years agoRemove most <> from tutorials 9926/head
Peter Munch [Sat, 18 Apr 2020 21:54:53 +0000 (23:54 +0200)]
Remove most <> from tutorials

4 years agodocumentation: workload_imbalance and assert valid 9912/head
Timo Heister [Thu, 16 Apr 2020 21:45:52 +0000 (17:45 -0400)]
documentation: workload_imbalance and assert valid

4 years agoSplit grid_tools.cc into two instantiation files. 9924/head
David Wells [Sat, 18 Apr 2020 20:29:12 +0000 (16:29 -0400)]
Split grid_tools.cc into two instantiation files.

4 years agoMove some non-template functions into a new file.
David Wells [Sat, 18 Apr 2020 20:08:37 +0000 (16:08 -0400)]
Move some non-template functions into a new file.

This will let us split up grid_tools.cc with SPLIT_INSTANTIATIONS_COUNT
in the next step.

4 years agoTweak the settings for unity builds slightly.
David Wells [Sat, 18 Apr 2020 16:57:06 +0000 (12:57 -0400)]
Tweak the settings for unity builds slightly.

These two unity files had large (3.4 GB for fe/unity_3.cc, 5.4 GB for
grid/unity_0.cc) maximum resident set sizes.

4 years agoBuild documentation 9922/head
Daniel Arndt [Sat, 18 Apr 2020 01:58:35 +0000 (21:58 -0400)]
Build documentation

4 years agoMerge pull request #9880 from masterleinad/fix_doxygen
Wolfgang Bangerth [Sun, 19 Apr 2020 01:29:33 +0000 (03:29 +0200)]
Merge pull request #9880 from masterleinad/fix_doxygen

Avoid doxygen warnings

4 years agoMerge pull request #9915 from tjhei/move_is_multilevel_hierarchy
Daniel Arndt [Sun, 19 Apr 2020 00:47:25 +0000 (20:47 -0400)]
Merge pull request #9915 from tjhei/move_is_multilevel_hierarchy

4 years agomove is_multilevel_hierarchy_constructed() up 9915/head
Timo Heister [Fri, 17 Apr 2020 14:06:17 +0000 (10:06 -0400)]
move is_multilevel_hierarchy_constructed() up

Move is_multilevel_hierarchy_constructed() from
DistributedTriangulationBase to parallel::TriangulationBase

4 years agoMerge pull request #9921 from kronbichler/fix_parallel_vector_16_test
Daniel Arndt [Sat, 18 Apr 2020 13:11:39 +0000 (09:11 -0400)]
Merge pull request #9921 from kronbichler/fix_parallel_vector_16_test

4 years agoMerge pull request #9918 from masterleinad/remove_deprecated_ratio
Martin Kronbichler [Sat, 18 Apr 2020 09:45:15 +0000 (11:45 +0200)]
Merge pull request #9918 from masterleinad/remove_deprecated_ratio

Remove deprecated ratio member functions

4 years agoFix test mpi/parallel_vector_16 9921/head
Martin Kronbichler [Sat, 18 Apr 2020 09:39:47 +0000 (11:39 +0200)]
Fix test mpi/parallel_vector_16

4 years agoMerge pull request #9916 from drwells/improve-step-8
Daniel Arndt [Fri, 17 Apr 2020 23:12:18 +0000 (19:12 -0400)]
Merge pull request #9916 from drwells/improve-step-8

4 years agohotfix step-50 9880/head
Daniel Arndt [Fri, 17 Apr 2020 22:12:10 +0000 (18:12 -0400)]
hotfix step-50

4 years agoFix source
Daniel Arndt [Fri, 17 Apr 2020 21:46:05 +0000 (17:46 -0400)]
Fix source

4 years agoFix include
Daniel Arndt [Fri, 17 Apr 2020 21:12:57 +0000 (17:12 -0400)]
Fix include

4 years agoFix examples
Daniel Arndt [Fri, 17 Apr 2020 21:12:19 +0000 (17:12 -0400)]
Fix examples

4 years agoFix doc
Daniel Arndt [Fri, 17 Apr 2020 21:12:00 +0000 (17:12 -0400)]
Fix doc

4 years agoMerge pull request #9917 from nfehn/step-35
Wolfgang Bangerth [Fri, 17 Apr 2020 16:38:01 +0000 (18:38 +0200)]
Merge pull request #9917 from nfehn/step-35

improve documentation of step-35

4 years agoFix indentation
Daniel Arndt [Mon, 13 Apr 2020 00:42:57 +0000 (20:42 -0400)]
Fix indentation

4 years agoEnable zlib again for doxygen
Daniel Arndt [Mon, 13 Apr 2020 00:40:59 +0000 (20:40 -0400)]
Enable zlib again for doxygen

4 years agoUpdate doc/doxygen/options.dox.in
Daniel Arndt [Mon, 13 Apr 2020 00:38:59 +0000 (20:38 -0400)]
Update doc/doxygen/options.dox.in

Co-Authored-By: Timo Heister <timo.heister@gmail.com>
4 years agoMiscallaneous fixes
Daniel Arndt [Mon, 13 Apr 2020 00:07:39 +0000 (20:07 -0400)]
Miscallaneous fixes

4 years agoDon't copy from FEEvaluationAccess
Daniel Arndt [Mon, 13 Apr 2020 00:07:04 +0000 (20:07 -0400)]
Don't copy from FEEvaluationAccess

4 years agoFix more link requests
Daniel Arndt [Mon, 13 Apr 2020 00:06:36 +0000 (20:06 -0400)]
Fix more link requests

4 years agoDon't use template argument in documentation
Daniel Arndt [Sun, 12 Apr 2020 23:56:52 +0000 (19:56 -0400)]
Don't use template argument in documentation

4 years agoDon't use dealii:: in tria_objects.h
Daniel Arndt [Sun, 12 Apr 2020 23:56:06 +0000 (19:56 -0400)]
Don't use dealii:: in tria_objects.h

4 years agoAvoid some failing link requests
Daniel Arndt [Sun, 12 Apr 2020 23:55:33 +0000 (19:55 -0400)]
Avoid some failing link requests

4 years agoHide internal functions and specializations
Daniel Arndt [Sun, 12 Apr 2020 23:44:59 +0000 (19:44 -0400)]
Hide internal functions and specializations

4 years agoUse @p instead of @param
Daniel Arndt [Sun, 12 Apr 2020 23:43:32 +0000 (19:43 -0400)]
Use @p instead of @param

4 years agoFix CoarseningStrategies
Daniel Arndt [Sun, 12 Apr 2020 23:42:25 +0000 (19:42 -0400)]
Fix CoarseningStrategies

4 years agoFix symengine_*_operations.h
Daniel Arndt [Sun, 12 Apr 2020 23:41:24 +0000 (19:41 -0400)]
Fix symengine_*_operations.h

4 years agoFix std namespace
Daniel Arndt [Sun, 12 Apr 2020 23:38:06 +0000 (19:38 -0400)]
Fix std namespace

4 years agoFix examples
Daniel Arndt [Sun, 12 Apr 2020 23:36:45 +0000 (19:36 -0400)]
Fix examples

4 years agoModify options.dox.in
Daniel Arndt [Sun, 12 Apr 2020 23:16:13 +0000 (19:16 -0400)]
Modify options.dox.in

4 years agoFix doc entries
Daniel Arndt [Sun, 12 Apr 2020 23:04:42 +0000 (19:04 -0400)]
Fix doc entries

4 years agoFix step-*
Daniel Arndt [Sun, 12 Apr 2020 23:00:29 +0000 (19:00 -0400)]
Fix step-*

4 years agoRemove deprecated ratio member functions 9918/head
Daniel Arndt [Fri, 17 Apr 2020 16:13:29 +0000 (12:13 -0400)]
Remove deprecated ratio member functions

4 years agoimprove documentation of step-35 9917/head
Niklas Fehn [Fri, 17 Apr 2020 16:12:52 +0000 (18:12 +0200)]
improve documentation of step-35

4 years agostep-8: make text agree with code. 9916/head
David Wells [Fri, 17 Apr 2020 15:33:46 +0000 (11:33 -0400)]
step-8: make text agree with code.

4 years agoMerge pull request #9906 from masterleinad/remove_deprecated_vector_print
Wolfgang Bangerth [Fri, 17 Apr 2020 15:31:08 +0000 (17:31 +0200)]
Merge pull request #9906 from masterleinad/remove_deprecated_vector_print

Remove deprecated Vector::print overloads

4 years agostep-8: make setup more like step-6.
David Wells [Fri, 17 Apr 2020 15:07:01 +0000 (11:07 -0400)]
step-8: make setup more like step-6.

4 years agostep-8: improve header whitespace.
David Wells [Thu, 16 Apr 2020 20:51:48 +0000 (16:51 -0400)]
step-8: improve header whitespace.

4 years agostep-8: remove destructor.
David Wells [Thu, 16 Apr 2020 20:43:11 +0000 (16:43 -0400)]
step-8: remove destructor.

step-6 no longer has a destructor anyway (see aae3ab83d2).

4 years agostep-8: Improve doxygen links.
David Wells [Thu, 16 Apr 2020 20:51:10 +0000 (16:51 -0400)]
step-8: Improve doxygen links.

We do not need to surround these class names with <code></code>.

4 years agostep-8: use {} instead of very long type.
David Wells [Wed, 15 Apr 2020 19:13:29 +0000 (15:13 -0400)]
step-8: use {} instead of very long type.

4 years agoMerge pull request #9911 from masterleinad/use_checkout_v2_for_windows
Timo Heister [Fri, 17 Apr 2020 14:12:37 +0000 (10:12 -0400)]
Merge pull request #9911 from masterleinad/use_checkout_v2_for_windows

Also use checkout@v2 for Windows CI

4 years agoFix tests 9906/head
Daniel Arndt [Fri, 17 Apr 2020 01:30:59 +0000 (21:30 -0400)]
Fix tests

4 years agostep-8: Use AffineConstraints::distribute_local_to_global().
David Wells [Wed, 15 Apr 2020 19:13:02 +0000 (15:13 -0400)]
step-8: Use AffineConstraints::distribute_local_to_global().

4 years agostep-8: use MathJax in some formulas.
David Wells [Wed, 15 Apr 2020 18:52:27 +0000 (14:52 -0400)]
step-8: use MathJax in some formulas.

Also use <tt></tt> where appropriate for typesetting variables.

4 years agoMerge pull request #9910 from masterleinad/fix_petsc_copy_to_dealvec_block
Daniel Arndt [Thu, 16 Apr 2020 22:30:52 +0000 (18:30 -0400)]
Merge pull request #9910 from masterleinad/fix_petsc_copy_to_dealvec_block

4 years agoAlso use chevkout@v2 for Windows CI 9911/head
Daniel Arndt [Thu, 16 Apr 2020 20:56:34 +0000 (16:56 -0400)]
Also use chevkout@v2 for Windows CI

4 years agoMerge pull request #9907 from kronbichler/do_not_include_fe_q_h
Martin Kronbichler [Thu, 16 Apr 2020 19:52:29 +0000 (21:52 +0200)]
Merge pull request #9907 from kronbichler/do_not_include_fe_q_h

Do not include fe_q.h in mapping_q_generic.h

4 years agoMerge pull request #9905 from drwells/remove-static-casts
Martin Kronbichler [Thu, 16 Apr 2020 18:40:34 +0000 (20:40 +0200)]
Merge pull request #9905 from drwells/remove-static-casts

Remove some unneeded static casts.

4 years agoFix petsc/copy_to_dealvec_block 9910/head
Daniel Arndt [Thu, 16 Apr 2020 18:20:26 +0000 (14:20 -0400)]
Fix petsc/copy_to_dealvec_block

4 years agoMerge pull request #9909 from peterrum/grid_tools_exchange_cell_data_to_ghosts_cast
Martin Kronbichler [Thu, 16 Apr 2020 18:10:20 +0000 (20:10 +0200)]
Merge pull request #9909 from peterrum/grid_tools_exchange_cell_data_to_ghosts_cast

GridTools::exchange_cell_data_to_ghosts replace cast

4 years agoChangelog 9907/head
Martin Kronbichler [Thu, 16 Apr 2020 18:09:31 +0000 (20:09 +0200)]
Changelog

4 years agoMerge pull request #9908 from peterrum/write_vkt_fix_type
Wolfgang Bangerth [Thu, 16 Apr 2020 15:15:25 +0000 (17:15 +0200)]
Merge pull request #9908 from peterrum/write_vkt_fix_type

Fix type in GridOut::write_vtk

4 years agoGridTools::exchange_cell_data_to_ghosts replace static_cast by dynamic_cast 9909/head
Peter Munch [Thu, 16 Apr 2020 15:08:12 +0000 (17:08 +0200)]
GridTools::exchange_cell_data_to_ghosts replace static_cast by dynamic_cast

4 years agoRemove some unneeded static casts. 9905/head
David Wells [Thu, 16 Apr 2020 02:08:59 +0000 (22:08 -0400)]
Remove some unneeded static casts.

These types are all printable now (see 7a3b4065d4d) so we don't need these
static casts.

4 years agoFix type in GridOut::write_vtk 9908/head
Peter Munch [Thu, 16 Apr 2020 13:08:16 +0000 (15:08 +0200)]
Fix type in GridOut::write_vtk

4 years agoDo not include fe_q.h in mapping_q_generic.h
Martin Kronbichler [Thu, 16 Apr 2020 06:32:20 +0000 (08:32 +0200)]
Do not include fe_q.h in mapping_q_generic.h

4 years agoMerge pull request #9873 from jppelteret/doc_timestepping_schemes_01
Martin Kronbichler [Thu, 16 Apr 2020 06:11:53 +0000 (08:11 +0200)]
Merge pull request #9873 from jppelteret/doc_timestepping_schemes_01

Document time stepping methods to tutorial summary.

4 years agoMerge pull request #9902 from peterrum/latex_fixes
Martin Kronbichler [Thu, 16 Apr 2020 05:59:09 +0000 (07:59 +0200)]
Merge pull request #9902 from peterrum/latex_fixes

Minor latex fixes in step-67 and step-69

4 years agoMerge pull request #9904 from drwells/gnuplot-cleanup-1
Martin Kronbichler [Thu, 16 Apr 2020 05:57:45 +0000 (07:57 +0200)]
Merge pull request #9904 from drwells/gnuplot-cleanup-1

Move an object to the stack.

4 years agoRemove deprecated Vector::print overloads
Daniel Arndt [Thu, 16 Apr 2020 02:48:45 +0000 (22:48 -0400)]
Remove deprecated Vector::print overloads

4 years agoMerge pull request #9897 from bangerth/52
David Wells [Thu, 16 Apr 2020 02:23:01 +0000 (22:23 -0400)]
Merge pull request #9897 from bangerth/52

Use the same variable name in all output files in step-52.

4 years agoMerge pull request #9896 from tcclevenger/constant_modes_fix
David Wells [Thu, 16 Apr 2020 02:21:36 +0000 (22:21 -0400)]
Merge pull request #9896 from tcclevenger/constant_modes_fix

TrilinosML constant modes bug fix

4 years agoMerge pull request #9899 from bangerth/52-2
David Wells [Thu, 16 Apr 2020 02:18:39 +0000 (22:18 -0400)]
Merge pull request #9899 from bangerth/52-2

Make the output of step-52 a bit easier to read.

4 years agoMove an object to the stack. 9904/head
David Wells [Thu, 16 Apr 2020 01:38:40 +0000 (21:38 -0400)]
Move an object to the stack.

4 years agoMerge pull request #9885 from peterrum/prm_warning
Wolfgang Bangerth [Thu, 16 Apr 2020 01:02:48 +0000 (03:02 +0200)]
Merge pull request #9885 from peterrum/prm_warning

Add incompatibility entry regrading ParameterHandler::parse_input()

4 years agoMerge pull request #9895 from bangerth/enable_if
David Wells [Wed, 15 Apr 2020 22:21:45 +0000 (18:21 -0400)]
Merge pull request #9895 from bangerth/enable_if

Use std::enable_if instead of boost::disable_if.

4 years agoAdd warning to parse_input 9885/head
Peter Munch [Tue, 14 Apr 2020 10:58:53 +0000 (12:58 +0200)]
Add warning to parse_input

4 years agoMinor latex fixes in step-67 and step-69 9902/head
Peter Munch [Wed, 15 Apr 2020 20:49:24 +0000 (22:49 +0200)]
Minor latex fixes in step-67 and step-69

4 years agoMerge pull request #9894 from bangerth/prm
Daniel Arndt [Wed, 15 Apr 2020 20:13:00 +0000 (16:13 -0400)]
Merge pull request #9894 from bangerth/prm

4 years agoMerge pull request #9900 from bangerth/visit
Daniel Arndt [Wed, 15 Apr 2020 20:00:06 +0000 (16:00 -0400)]
Merge pull request #9900 from bangerth/visit

4 years agoCorrect the spelling of the VisIt program. 9900/head
Wolfgang Bangerth [Wed, 15 Apr 2020 19:54:12 +0000 (13:54 -0600)]
Correct the spelling of the VisIt program.

4 years agoMake the output of step-52 a bit easier to read. 9899/head
Wolfgang Bangerth [Wed, 15 Apr 2020 19:49:38 +0000 (13:49 -0600)]
Make the output of step-52 a bit easier to read.

4 years agoUse the same variable name in all output files. 9897/head
Wolfgang Bangerth [Wed, 15 Apr 2020 19:38:49 +0000 (13:38 -0600)]
Use the same variable name in all output files.

4 years agoextract_constant_modes fix 9896/head
tcclevenger [Wed, 15 Apr 2020 18:04:18 +0000 (14:04 -0400)]
extract_constant_modes fix

4 years agoMerge pull request #9893 from bangerth/cleanups
Bruno Turcksin [Wed, 15 Apr 2020 16:59:39 +0000 (12:59 -0400)]
Merge pull request #9893 from bangerth/cleanups

4 years agoUse std::enable_if instead of boost::disable_if. 9895/head
Wolfgang Bangerth [Wed, 15 Apr 2020 16:43:46 +0000 (10:43 -0600)]
Use std::enable_if instead of boost::disable_if.

4 years agoUse std::ifstream instead of the detour via std::filebuf. 9894/head
Wolfgang Bangerth [Wed, 15 Apr 2020 14:50:12 +0000 (08:50 -0600)]
Use std::ifstream instead of the detour via std::filebuf.

While there also move an assertion.

4 years agoFix a couple of things in step-52. 9893/head
Wolfgang Bangerth [Wed, 15 Apr 2020 14:18:23 +0000 (08:18 -0600)]
Fix a couple of things in step-52.

4 years agoMerge pull request #9890 from luca-heltai/set-particle-positions-fix
Wolfgang Bangerth [Wed, 15 Apr 2020 14:18:01 +0000 (16:18 +0200)]
Merge pull request #9890 from luca-heltai/set-particle-positions-fix

Fix set particle positions from Function<spacedim>

4 years agoMerge pull request #9826 from kronbichler/remove_fe_q_from_mapping_q
David Wells [Wed, 15 Apr 2020 13:18:22 +0000 (09:18 -0400)]
Merge pull request #9826 from kronbichler/remove_fe_q_from_mapping_q

Do not use FE_Q in MappingQGeneric

4 years agoMerge pull request #9882 from masterleinad/remove_generalized_face_support
David Wells [Wed, 15 Apr 2020 13:17:20 +0000 (09:17 -0400)]
Merge pull request #9882 from masterleinad/remove_generalized_face_support

Remove FiniteElement::[has|get]_generalized_face_support_points

4 years agoFix set particle positions. 9890/head
Luca Heltai [Tue, 14 Apr 2020 22:53:53 +0000 (00:53 +0200)]
Fix set particle positions.

4 years agoMerge pull request #9887 from dangars/petsc_jacobi_tvmult
Martin Kronbichler [Wed, 15 Apr 2020 04:54:32 +0000 (06:54 +0200)]
Merge pull request #9887 from dangars/petsc_jacobi_tvmult

Add Tvmult to Petsc PreconditionJacobi

4 years agoReduce possibility for roundoff in DataOut VTU test 9826/head
Martin Kronbichler [Tue, 14 Apr 2020 20:49:02 +0000 (22:49 +0200)]
Reduce possibility for roundoff in DataOut VTU test


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