]>
https://gitweb.dealii.org/ - dealii.git/log
Rene Gassmoeller [Sat, 9 May 2020 23:14:21 +0000 (16:14 -0700)]
Fix some typos
blaisb [Thu, 7 May 2020 02:16:00 +0000 (22:16 -0400)]
Addresses all of the corrections and comments of @peterrum
Introduction and documentation can still be improved.
Luca Heltai [Sat, 2 May 2020 21:31:06 +0000 (23:31 +0200)]
Fixed codimension one build.
blaisb [Sat, 2 May 2020 06:07:31 +0000 (02:07 -0400)]
Short fix to documentation
blaisb [Sat, 2 May 2020 05:58:26 +0000 (01:58 -0400)]
- Corrected typos and mistakes
- Finished first pass at documenting step-70
- Changed the default parameter of nitsche penalization to ensure convergence of iterative solver in parallel
- Changed the function driving the motion of the impeller to ensure it comes back at it's original place in then end
Luca Heltai [Fri, 1 May 2020 23:03:03 +0000 (01:03 +0200)]
Some more docs.
Luca Heltai [Fri, 1 May 2020 14:58:48 +0000 (16:58 +0200)]
Allow filenames and cad files.
Luca Heltai [Fri, 1 May 2020 13:12:33 +0000 (15:12 +0200)]
Trailing space.
Luca Heltai [Fri, 1 May 2020 10:47:20 +0000 (12:47 +0200)]
More docs.
blaisb [Fri, 1 May 2020 03:05:55 +0000 (23:05 -0400)]
Fixed typos and small formulas error in the introduction
Luca Heltai [Thu, 30 Apr 2020 21:48:33 +0000 (23:48 +0200)]
Revised and corrected intro.dox
Luca Heltai [Thu, 30 Apr 2020 19:33:11 +0000 (21:33 +0200)]
Added description of step-70 in top level directory.
Luca Heltai [Thu, 30 Apr 2020 18:03:55 +0000 (20:03 +0200)]
Add implementation of Nitsche for co-dim one
blaisb [Thu, 30 Apr 2020 17:11:06 +0000 (13:11 -0400)]
- Fixed a lot of mistakes in equations that prevented rendering
- Fixed a few spelling mistakes
- Fixed formulation of the weak form for the Nitsche method
blaisb [Thu, 30 Apr 2020 13:05:30 +0000 (09:05 -0400)]
Indentation fix
Luca Heltai [Thu, 30 Apr 2020 12:09:08 +0000 (14:09 +0200)]
Try to fix doxygen.
blaisb [Thu, 30 Apr 2020 04:40:15 +0000 (00:40 -0400)]
Finished a first complete draft of the introduction
Luca Heltai [Tue, 28 Apr 2020 21:36:19 +0000 (23:36 +0200)]
Some documentation.
blaisb [Mon, 20 Apr 2020 02:19:35 +0000 (22:19 -0400)]
Progress on documentation
blaisb [Sat, 18 Apr 2020 05:39:27 +0000 (01:39 -0400)]
Begun work on the introduction of the documentation of step-70
Luca Heltai [Fri, 17 Apr 2020 00:41:45 +0000 (02:41 +0200)]
Local refinement, and output to single vtu + global pvd.
Luca Heltai [Tue, 14 Apr 2020 23:09:21 +0000 (01:09 +0200)]
Copy doc from step-60.
Luca Heltai [Tue, 14 Apr 2020 23:00:20 +0000 (01:00 +0200)]
Added example parameter file.
Luca Heltai [Thu, 21 Nov 2019 19:28:22 +0000 (20:28 +0100)]
Step-70
Work in progress for step-70.
Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
Martin Kronbichler [Thu, 14 May 2020 19:46:23 +0000 (21:46 +0200)]
Merge pull request #10182 from nfehn/feevaluation
clarify documentation of FEEvaluation::set_dof_values()
Martin Kronbichler [Thu, 14 May 2020 19:45:31 +0000 (21:45 +0200)]
Merge pull request #10208 from agrayver/fix_python_manifold
Fix python FunctionManifold
Wolfgang Bangerth [Thu, 14 May 2020 15:44:29 +0000 (17:44 +0200)]
Merge pull request #10013 from marcfehling/pd-error-prediction-extension
Introduced p::d::ErrorPredictor.
Niklas Fehn [Wed, 13 May 2020 11:56:39 +0000 (13:56 +0200)]
clarify documentation of FEEvaluation::set_dof_values()
Marc Fehling [Fri, 22 Nov 2019 17:06:14 +0000 (18:06 +0100)]
Introduced p::d::ErrorPredictor.
Predicts error after adaptation based on future_fe_indices and CellStatus.
Timo Heister [Thu, 14 May 2020 11:56:53 +0000 (07:56 -0400)]
Merge pull request #10194 from drwells/remove-cout-from-test
Avoid using std::cout in a test.
Timo Heister [Thu, 14 May 2020 11:55:52 +0000 (07:55 -0400)]
Merge pull request #10201 from tamiko/fix_parpack_search
CMake: relax arpack and parpack library directory requirements
Timo Heister [Thu, 14 May 2020 11:55:29 +0000 (07:55 -0400)]
Merge pull request #10207 from peterrum/extract_rtree_level_small_fix
Fix extract_rtree_level for small problem sizes
Alexander Grayver [Thu, 14 May 2020 09:25:39 +0000 (11:25 +0200)]
Fix python FunctionManifold
Peter Munch [Thu, 14 May 2020 08:32:50 +0000 (10:32 +0200)]
Fix extract_rtree_level for small problem sizes
Timo Heister [Thu, 14 May 2020 00:29:22 +0000 (20:29 -0400)]
Merge pull request #10199 from masterleinad/fix_mpi_condense_petsc_complex
Choose output files for mpi/condense_01 correctly
Matthias Maier [Wed, 13 May 2020 23:21:29 +0000 (18:21 -0500)]
Merge pull request #10202 from bangerth/changelog
Update an entry in the changelog.
Wolfgang Bangerth [Wed, 13 May 2020 23:05:53 +0000 (17:05 -0600)]
Update an entry in the changelog.
Matthias Maier [Wed, 13 May 2020 22:54:10 +0000 (17:54 -0500)]
CMake: relax arpack and parpack library directory requirements
Some Linux distributions install the parallel libparpack.so* component
in an MPI vendor specific directory different from the location of the
serial libarpack.so* library. We can thus not assume that both are
located in the same directory.
Closes: #10197
Matthias Maier [Wed, 13 May 2020 22:49:29 +0000 (17:49 -0500)]
Merge pull request #10195 from tamiko/fix_doxygen_include_strip
Doxygen: Fix include strip
Daniel Arndt [Wed, 13 May 2020 22:09:46 +0000 (18:09 -0400)]
Choose output files for mpi/condense_01 correctly
Matthias Maier [Wed, 13 May 2020 19:19:18 +0000 (14:19 -0500)]
Doxygen: Fix include strip
This fixes a bug introduced in #10187
Wolfgang Bangerth [Wed, 13 May 2020 17:57:05 +0000 (19:57 +0200)]
Merge pull request #10189 from tamiko/documentation-fix-code-gallery-installation-path
Documentation: Treat code gallery projects as examples
David Wells [Wed, 13 May 2020 17:37:24 +0000 (13:37 -0400)]
Avoid using std::cout in a test.
This is problematic on misconfigured MPI implementations that print
warnings for one reason or another every time they are run (e.g., the
default MPI implementation on Ubuntu 16.04).
It is easy enough in this case to do the normal thing and print
everything to deallog.
Timo Heister [Wed, 13 May 2020 17:04:40 +0000 (13:04 -0400)]
Merge pull request #10191 from tamiko/fix_code_gallery
Documentation: fix make_gallery.pl
Timo Heister [Wed, 13 May 2020 17:02:23 +0000 (13:02 -0400)]
Merge pull request #10190 from masterleinad/run_travis
Run Travis on all branches
Matthias Maier [Wed, 13 May 2020 16:46:31 +0000 (11:46 -0500)]
Documentation: fix make_gallery.pl
Otherwise newer doxygen does not parse the generated *.h files...
See #8972
Daniel Arndt [Wed, 13 May 2020 16:41:20 +0000 (12:41 -0400)]
Run Travis on all branches
Matthias Maier [Wed, 13 May 2020 16:02:38 +0000 (11:02 -0500)]
Documentation: Treat code gallery projects as examples
Installing the code gallery projects as part of the html documentation
is not ideal. Let us install the code gallery projects as a sub
directory under the EXAMPLES_RELDIR instead:
examples/code-gallery/*
examples/step-*
Daniel Arndt [Wed, 13 May 2020 13:59:21 +0000 (09:59 -0400)]
Merge pull request #10183 from bangerth/47
Wolfgang Bangerth [Wed, 13 May 2020 13:37:08 +0000 (07:37 -0600)]
Fix missing closing braces.
Daniel Arndt [Wed, 13 May 2020 13:02:02 +0000 (09:02 -0400)]
Merge pull request #10181 from kronbichler/always_inline_method
Martin Kronbichler [Wed, 13 May 2020 10:55:29 +0000 (12:55 +0200)]
Always inline FEEvaluationBase::inverse_jacobian
Martin Kronbichler [Wed, 13 May 2020 10:01:09 +0000 (12:01 +0200)]
Merge pull request #10179 from tamiko/make_offlinedoc
contrib/utilities/makeofflinedoc.sh: Also install jpg
Martin Kronbichler [Wed, 13 May 2020 10:00:25 +0000 (12:00 +0200)]
Merge pull request #10178 from tamiko/fix_doxygen_stip_path
doxygen: Strip full @CMAKE_SOURCE_DIR@ and @CMAKE_BINARY_DIR@
Martin Kronbichler [Wed, 13 May 2020 09:58:25 +0000 (11:58 +0200)]
Merge pull request #10176 from Rombur/fix_cuda_release
CUDA: multiple fixes
Matthias Maier [Wed, 13 May 2020 06:43:02 +0000 (01:43 -0500)]
contrib/utilities/makeofflinedoc.sh: Also install jpg
Martin Kronbichler [Wed, 13 May 2020 06:01:48 +0000 (08:01 +0200)]
Merge pull request #10161 from lethe-cfd/interpolate_to_particles_unused_variables
Removed two variables which were not used in particles/utilities.h
Matthias Maier [Wed, 13 May 2020 05:12:48 +0000 (00:12 -0500)]
doxygen: Strip full @CMAKE_SOURCE_DIR@ and @CMAKE_BINARY_DIR@
The current configuration fails to strip the repository path from source
directories, e.g., on the homepage we have for example:
"""
The documentation for this struct was generated from the following files:
deal.II/lac/petsc_precondition.h
/home/dealii/dealii/source/lac/petsc_precondition.cc
"""
With this change this now reads:
"""
The documentation for this struct was generated from the following files:
include/deal.II/lac/petsc_precondition.h
source/lac/petsc_precondition.cc
"""
Matthias Maier [Wed, 13 May 2020 03:17:02 +0000 (22:17 -0500)]
Merge pull request #10173 from tjhei/jenkins_test_release_branches_master
Jenkins: also test release branches
Daniel Arndt [Wed, 13 May 2020 02:12:19 +0000 (22:12 -0400)]
Merge pull request #10168 from tamiko/fix_offending_tests
Bruno Turcksin [Wed, 13 May 2020 02:11:32 +0000 (02:11 +0000)]
Silence deprecation warnings
Bruno Turcksin [Wed, 13 May 2020 02:03:05 +0000 (02:03 +0000)]
Fix comment
Bruno Turcksin [Wed, 13 May 2020 02:02:26 +0000 (02:02 +0000)]
Remove unusable variable
Bruno Turcksin [Wed, 13 May 2020 02:01:49 +0000 (02:01 +0000)]
Use sensible default parameter
Bruno Turcksin [Wed, 13 May 2020 02:00:50 +0000 (02:00 +0000)]
Fix test after some sadd and equ functions have been removed
Timo Heister [Tue, 12 May 2020 19:14:42 +0000 (15:14 -0400)]
Jenknis: also test release branches
Daniel Arndt [Wed, 13 May 2020 01:12:05 +0000 (21:12 -0400)]
Merge pull request #10171 from tamiko/output_alternatives
Matthias Maier [Wed, 13 May 2020 00:58:08 +0000 (19:58 -0500)]
update fe_series tests again to latest changes
Matthias Maier [Wed, 13 May 2020 00:27:35 +0000 (19:27 -0500)]
do not print mesh in opencascade/stl_* tests
These tests create a mesh (with our opencascade) interface.
Unfortunately, the result pretty much depends on the mesher being used
(which changes between opencascade and oce versions), the standard
library version (libstdc++ versus libc++) and the CPU architecture.
I initially thought that the test result would not depend on the machine
this test is running on and created the output alternatives
(*.output.opencascade7.4.0) on my laptop. Evidently this did not fix
this test on our main tester. Let's simply remove the output and just
check that the code path runs without throwing an error.
Timo Heister [Tue, 12 May 2020 22:14:50 +0000 (18:14 -0400)]
Merge pull request #10166 from tamiko/documentation_fix
examples/step-69: fix texttt formulas
Matthias Maier [Tue, 12 May 2020 22:01:37 +0000 (17:01 -0500)]
examples/step-69: fix texttt formulas
blaisb [Tue, 12 May 2020 20:14:06 +0000 (16:14 -0400)]
Removed two variables which were not used in particles/utilities.h
Matthias Maier [Tue, 12 May 2020 18:00:47 +0000 (13:00 -0500)]
Merge pull request #10158 from tamiko/reuquire_current_version
Release step 6a: Require the current version of deal.II
David Wells [Tue, 12 May 2020 17:56:46 +0000 (13:56 -0400)]
Merge pull request #10157 from tamiko/update_version
Release step 5: update VERSION
David Wells [Tue, 12 May 2020 17:56:36 +0000 (13:56 -0400)]
Merge pull request #10156 from tamiko/update-tag-file
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 17:55:16 +0000 (12:55 -0500)]
Merge pull request #10154 from tamiko/update-changes-file
Release step 1: Update changelog file
Matthias Maier [Tue, 12 May 2020 17:28:31 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:25 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:16 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:08 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:02 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:55 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:44 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:20 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:06 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:17:09 +0000 (12:17 -0500)]
add dummy entries to make travis happy
Matthias Maier [Tue, 12 May 2020 17:12:07 +0000 (12:12 -0500)]
fix year range
Martin Kronbichler [Tue, 12 May 2020 17:10:52 +0000 (19:10 +0200)]
Merge pull request #10155 from masterleinad/instantiate_opencascade
Instantiate OpenCASCADE
Matthias Maier [Tue, 12 May 2020 17:08:27 +0000 (12:08 -0500)]
Require the current version of deal.II.
Matthias Maier [Tue, 12 May 2020 17:04:54 +0000 (12:04 -0500)]
update VERSION
Matthias Maier [Tue, 12 May 2020 17:01:49 +0000 (12:01 -0500)]
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 16:59:15 +0000 (11:59 -0500)]
Remove now obsolete files.
Matthias Maier [Tue, 12 May 2020 16:58:22 +0000 (11:58 -0500)]
Update the changelog file for the release.
Daniel Arndt [Tue, 12 May 2020 16:47:18 +0000 (12:47 -0400)]
Instantiate OpenCASCADE
Martin Kronbichler [Tue, 12 May 2020 16:13:19 +0000 (18:13 +0200)]
Merge pull request #7513 from marcfehling/smoothness-estimator-2
Introduced SmoothnessEstimator.
Matthias Maier [Tue, 12 May 2020 15:27:25 +0000 (10:27 -0500)]
Merge pull request #10152 from marcfehling/prediction-extension
Updated doc for hp::Refinement::predict_error().
marcfehling [Tue, 12 May 2020 15:03:40 +0000 (17:03 +0200)]
Update include/deal.II/hp/refinement.h
Co-authored-by: Timo Heister <timo.heister@gmail.com>
Matthias Maier [Tue, 12 May 2020 04:48:13 +0000 (23:48 -0500)]
fix compilation
Matthias Maier [Mon, 11 May 2020 19:48:19 +0000 (14:48 -0500)]
Address typos brought up in review comments
Update include/deal.II/hp/fe_collection.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Co-authored-by: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
Marc Fehling [Wed, 29 Apr 2020 17:13:58 +0000 (19:13 +0200)]
Added SmoothnessEstimator::default_fe_series() functions returning default FESeries objects.
Removed default constructor and initialize() functions for FESeries objects.
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