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https://gitweb.dealii.org/ - dealii-svn.git/log
bangerth [Tue, 7 Oct 2008 21:52:32 +0000 (21:52 +0000)]
Add a comment.
git-svn-id: https://svn.dealii.org/trunk@17141
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bangerth [Tue, 7 Oct 2008 20:57:22 +0000 (20:57 +0000)]
Ignore versioned shared libs.
git-svn-id: https://svn.dealii.org/trunk@17140
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bangerth [Tue, 7 Oct 2008 20:56:22 +0000 (20:56 +0000)]
Use versioned dynamic libraries to make installing on distributions like Fedora or Debian a bit simpler.
git-svn-id: https://svn.dealii.org/trunk@17139
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bangerth [Tue, 7 Oct 2008 20:45:30 +0000 (20:45 +0000)]
Deal with external UMFPACK directories that are in different directories such as /usr
git-svn-id: https://svn.dealii.org/trunk@17138
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bangerth [Tue, 7 Oct 2008 20:06:31 +0000 (20:06 +0000)]
Remove version number since it easily outdates.
git-svn-id: https://svn.dealii.org/trunk@17137
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bangerth [Tue, 7 Oct 2008 19:57:16 +0000 (19:57 +0000)]
Use the proper dimensions for the maximal number of iterations.
git-svn-id: https://svn.dealii.org/trunk@17136
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bangerth [Tue, 7 Oct 2008 19:56:40 +0000 (19:56 +0000)]
Use the proper dimensions for the maximal number of iterations.
git-svn-id: https://svn.dealii.org/trunk@17135
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bangerth [Tue, 7 Oct 2008 19:55:37 +0000 (19:55 +0000)]
Use the proper dimensions for the maximal number of iterations.
git-svn-id: https://svn.dealii.org/trunk@17134
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kronbichler [Tue, 7 Oct 2008 05:37:34 +0000 (05:37 +0000)]
Forgot to check in one more file
git-svn-id: https://svn.dealii.org/trunk@17128
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bangerth [Tue, 7 Oct 2008 03:35:07 +0000 (03:35 +0000)]
Add output files for recently upgraded gcc.
git-svn-id: https://svn.dealii.org/trunk@17127
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bangerth [Tue, 7 Oct 2008 03:28:13 +0000 (03:28 +0000)]
Add output files for recently upgraded gcc.
git-svn-id: https://svn.dealii.org/trunk@17126
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bangerth [Tue, 7 Oct 2008 03:15:59 +0000 (03:15 +0000)]
Add some more output files after recent gcc update.
git-svn-id: https://svn.dealii.org/trunk@17125
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bangerth [Tue, 7 Oct 2008 03:09:46 +0000 (03:09 +0000)]
Update tests after the system and its compiler has been upgraded on strange.
git-svn-id: https://svn.dealii.org/trunk@17124
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bangerth [Tue, 7 Oct 2008 03:09:05 +0000 (03:09 +0000)]
Add a test that currently fails because we can't seem to enforce level-1-difference at vertices in 1d.
git-svn-id: https://svn.dealii.org/trunk@17123
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bangerth [Tue, 7 Oct 2008 03:07:03 +0000 (03:07 +0000)]
Improve the situation somewhat but deal.II/coarsening_02_1d is still failing, albeit after more refinement steps.
git-svn-id: https://svn.dealii.org/trunk@17122
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bangerth [Mon, 6 Oct 2008 19:32:18 +0000 (19:32 +0000)]
Be less conservative but potentially less correct also. We'll see if this comes back to biting us. To be on the safe side, add an assertion to the code.
git-svn-id: https://svn.dealii.org/trunk@17118
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bangerth [Mon, 6 Oct 2008 19:28:04 +0000 (19:28 +0000)]
Update tests after previous system and compiler upgrade.
git-svn-id: https://svn.dealii.org/trunk@17117
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bangerth [Mon, 6 Oct 2008 19:27:44 +0000 (19:27 +0000)]
Update tests after previous system and compiler upgrade.
git-svn-id: https://svn.dealii.org/trunk@17116
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bangerth [Mon, 6 Oct 2008 18:54:55 +0000 (18:54 +0000)]
Fix a bug where we produce meshes that do not honor the Triangulation::limit_level_difference_at_vertices flag.
git-svn-id: https://svn.dealii.org/trunk@17114
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kronbichler [Mon, 6 Oct 2008 17:02:37 +0000 (17:02 +0000)]
Added a new function for data exchange to Trilinos vector. Added a block direct solve as Trilinos preconditioner.
git-svn-id: https://svn.dealii.org/trunk@17113
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bangerth [Sun, 5 Oct 2008 19:37:59 +0000 (19:37 +0000)]
Patch by Adam Powell: Use the amsmath package to create latex formulas.
git-svn-id: https://svn.dealii.org/trunk@17108
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bangerth [Fri, 3 Oct 2008 18:44:10 +0000 (18:44 +0000)]
Don't use -Wno-long-double on MAC when not available.
git-svn-id: https://svn.dealii.org/trunk@17092
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bangerth [Wed, 1 Oct 2008 16:00:43 +0000 (16:00 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@17074
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bangerth [Wed, 1 Oct 2008 15:14:07 +0000 (15:14 +0000)]
Set svn:ignore.
git-svn-id: https://svn.dealii.org/trunk@17073
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bangerth [Tue, 30 Sep 2008 20:33:56 +0000 (20:33 +0000)]
Adjust to recent changes in SolutionTransfer.
git-svn-id: https://svn.dealii.org/trunk@17065
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bangerth [Tue, 30 Sep 2008 20:29:30 +0000 (20:29 +0000)]
Adjust output.
git-svn-id: https://svn.dealii.org/trunk@17064
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bangerth [Tue, 30 Sep 2008 18:58:11 +0000 (18:58 +0000)]
Remove some old code meant to suppress warnings that now produces warnings itself.
git-svn-id: https://svn.dealii.org/trunk@17062
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bangerth [Tue, 30 Sep 2008 18:54:40 +0000 (18:54 +0000)]
'mutable' should be at the beginning of the declaration.
git-svn-id: https://svn.dealii.org/trunk@17061
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bangerth [Mon, 29 Sep 2008 23:16:04 +0000 (23:16 +0000)]
Add test.
git-svn-id: https://svn.dealii.org/trunk@17055
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bangerth [Mon, 29 Sep 2008 19:22:04 +0000 (19:22 +0000)]
Remove auto-generated file.
git-svn-id: https://svn.dealii.org/trunk@17045
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bangerth [Mon, 29 Sep 2008 18:55:34 +0000 (18:55 +0000)]
Fix comment.
git-svn-id: https://svn.dealii.org/trunk@17042
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bangerth [Mon, 29 Sep 2008 18:54:02 +0000 (18:54 +0000)]
Add new tests that test without building a rhs vector.
git-svn-id: https://svn.dealii.org/trunk@17041
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bangerth [Mon, 29 Sep 2008 18:39:33 +0000 (18:39 +0000)]
Add comment.
git-svn-id: https://svn.dealii.org/trunk@17040
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bangerth [Mon, 29 Sep 2008 18:21:28 +0000 (18:21 +0000)]
Add a TODO.
git-svn-id: https://svn.dealii.org/trunk@17039
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bangerth [Mon, 29 Sep 2008 18:16:25 +0000 (18:16 +0000)]
Expect gfortran 4.4.
git-svn-id: https://svn.dealii.org/trunk@17038
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kronbichler [Sun, 28 Sep 2008 19:42:14 +0000 (19:42 +0000)]
When generating an empty matrix, call FillComplete() in case that empty matrix is requested somewhere.
git-svn-id: https://svn.dealii.org/trunk@17033
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kronbichler [Sun, 28 Sep 2008 17:09:11 +0000 (17:09 +0000)]
Added a few references to serial TrilinosWrappers vectors.
git-svn-id: https://svn.dealii.org/trunk@17032
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kronbichler [Sun, 28 Sep 2008 16:05:24 +0000 (16:05 +0000)]
Added a copy constructor to the Trilinos sparse matrix class.
git-svn-id: https://svn.dealii.org/trunk@17031
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kronbichler [Sat, 27 Sep 2008 11:12:43 +0000 (11:12 +0000)]
Introduce a temporary vector in the Trilinos SparseMatrix class that is used for faster vmult_add and matrix_scalar_product operations.
git-svn-id: https://svn.dealii.org/trunk@17018
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kronbichler [Sat, 27 Sep 2008 11:07:24 +0000 (11:07 +0000)]
Fixed an error that was caused by a different constructor in the new Trilinos 9.0.0 version.
git-svn-id: https://svn.dealii.org/trunk@17017
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kronbichler [Fri, 26 Sep 2008 07:56:08 +0000 (07:56 +0000)]
Forgot to add a file.
git-svn-id: https://svn.dealii.org/trunk@17011
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kronbichler [Thu, 25 Sep 2008 16:18:40 +0000 (16:18 +0000)]
Group the comments in a better way.
git-svn-id: https://svn.dealii.org/trunk@17008
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bangerth [Thu, 25 Sep 2008 13:28:18 +0000 (13:28 +0000)]
Fix totally botched sentence.
git-svn-id: https://svn.dealii.org/trunk@17007
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bangerth [Thu, 25 Sep 2008 13:20:35 +0000 (13:20 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@17006
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kronbichler [Wed, 24 Sep 2008 13:58:52 +0000 (13:58 +0000)]
Added a reinit function.
git-svn-id: https://svn.dealii.org/trunk@16908
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kronbichler [Wed, 24 Sep 2008 07:11:30 +0000 (07:11 +0000)]
Reduced residual tolerance for CG solve in inverse matrix by a factor of 10. It is essential to solve the inner matrix to high enough accuracy, since inaccuracies significantly increase the number of outer GMRES iterations.
git-svn-id: https://svn.dealii.org/trunk@16907
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kronbichler [Wed, 24 Sep 2008 07:05:45 +0000 (07:05 +0000)]
Changed preconditioner for pressure mass matrix from SSOR to IC. We need twice as many iterations then, but the costs for each iteration are only one fourth, so we still gain.
git-svn-id: https://svn.dealii.org/trunk@16906
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bangerth [Tue, 23 Sep 2008 20:00:19 +0000 (20:00 +0000)]
Allow default argument on SparseILU::initialize.
git-svn-id: https://svn.dealii.org/trunk@16904
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bangerth [Tue, 23 Sep 2008 19:45:57 +0000 (19:45 +0000)]
Link to results section of step-6 for a discussion of preconditioners.
git-svn-id: https://svn.dealii.org/trunk@16903
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bangerth [Tue, 23 Sep 2008 16:52:39 +0000 (16:52 +0000)]
Add a comparison of solvers/preconditioners.
git-svn-id: https://svn.dealii.org/trunk@16902
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bangerth [Tue, 23 Sep 2008 13:44:37 +0000 (13:44 +0000)]
Add a few results.
git-svn-id: https://svn.dealii.org/trunk@16899
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kronbichler [Tue, 23 Sep 2008 09:22:55 +0000 (09:22 +0000)]
Release the preconditioner object before a re-generation.
git-svn-id: https://svn.dealii.org/trunk@16898
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kronbichler [Tue, 23 Sep 2008 07:23:14 +0000 (07:23 +0000)]
Trilinos Ifpack preconditioner wrapper classes are now derived from a PreconditionBase class. Add a wrapper class to the Trilinos AztecOO solver for basic (non-block) systems.
git-svn-id: https://svn.dealii.org/trunk@16897
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bangerth [Mon, 22 Sep 2008 12:45:02 +0000 (12:45 +0000)]
Update to r48848 from http://svn.boost.org/svn/boost/trunk/boost/detail/spinlock.hpp
git-svn-id: https://svn.dealii.org/trunk@16893
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bangerth [Mon, 22 Sep 2008 02:06:44 +0000 (02:06 +0000)]
Continue documenting.
git-svn-id: https://svn.dealii.org/trunk@16892
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bangerth [Mon, 22 Sep 2008 02:03:55 +0000 (02:03 +0000)]
Comment on boundary conditions.
git-svn-id: https://svn.dealii.org/trunk@16891
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bangerth [Mon, 22 Sep 2008 02:03:09 +0000 (02:03 +0000)]
Rename a couple of variables.
git-svn-id: https://svn.dealii.org/trunk@16890
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bangerth [Mon, 22 Sep 2008 01:45:13 +0000 (01:45 +0000)]
Augment documentation
git-svn-id: https://svn.dealii.org/trunk@16889
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bangerth [Mon, 22 Sep 2008 01:42:45 +0000 (01:42 +0000)]
Augment.
git-svn-id: https://svn.dealii.org/trunk@16888
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bangerth [Sun, 21 Sep 2008 23:30:11 +0000 (23:30 +0000)]
Document the first two auxiliary functions. Avoid one mistake.
git-svn-id: https://svn.dealii.org/trunk@16887
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bangerth [Sun, 21 Sep 2008 21:39:19 +0000 (21:39 +0000)]
Remove the pressure boundary values -- they are only ever zero, and don't provide much insight anyway.
git-svn-id: https://svn.dealii.org/trunk@16886
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bangerth [Sun, 21 Sep 2008 21:33:54 +0000 (21:33 +0000)]
Incorporate the fix from http://thread.gmane.org/gmane.comp.lib.boost.devel/176050 to make it work again on x86_64 using the Intel compiler.
git-svn-id: https://svn.dealii.org/trunk@16885
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bangerth [Sun, 21 Sep 2008 20:56:27 +0000 (20:56 +0000)]
Fix misspelling.
git-svn-id: https://svn.dealii.org/trunk@16884
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bangerth [Sun, 21 Sep 2008 20:52:43 +0000 (20:52 +0000)]
Discuss no normal flux-boundary conditions.
git-svn-id: https://svn.dealii.org/trunk@16883
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bangerth [Sun, 21 Sep 2008 19:00:15 +0000 (19:00 +0000)]
Re-scale some images.
git-svn-id: https://svn.dealii.org/trunk@16882
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bangerth [Sun, 21 Sep 2008 18:58:06 +0000 (18:58 +0000)]
Use @code...@endcode.
git-svn-id: https://svn.dealii.org/trunk@16881
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bangerth [Sun, 21 Sep 2008 18:57:46 +0000 (18:57 +0000)]
Clarify normal stress.
git-svn-id: https://svn.dealii.org/trunk@16880
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bangerth [Sun, 21 Sep 2008 18:50:47 +0000 (18:50 +0000)]
Make using a sparsity pattern without epetra_map work.
git-svn-id: https://svn.dealii.org/trunk@16879
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bangerth [Sun, 21 Sep 2008 04:41:13 +0000 (04:41 +0000)]
Remove the Epetra_Maps and the communicator objects necessary for that.
git-svn-id: https://svn.dealii.org/trunk@16878
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bangerth [Sun, 21 Sep 2008 04:38:09 +0000 (04:38 +0000)]
Allow creation of local block vectors without an Epetra_Map.
git-svn-id: https://svn.dealii.org/trunk@16877
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bangerth [Sun, 21 Sep 2008 04:21:50 +0000 (04:21 +0000)]
Avoid an unnecessary cast.
git-svn-id: https://svn.dealii.org/trunk@16876
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bangerth [Sun, 21 Sep 2008 04:20:06 +0000 (04:20 +0000)]
Add the possibility to create block sparse matrices without an Epetra_Map when running on a single processor.
git-svn-id: https://svn.dealii.org/trunk@16875
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bangerth [Sun, 21 Sep 2008 04:01:36 +0000 (04:01 +0000)]
Replace {mathbb T} by {cal T} since we don't include the amsmath style.
git-svn-id: https://svn.dealii.org/trunk@16874
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bangerth [Sat, 20 Sep 2008 23:31:21 +0000 (23:31 +0000)]
Mention Trilinos.
git-svn-id: https://svn.dealii.org/trunk@16873
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bangerth [Sat, 20 Sep 2008 03:24:05 +0000 (03:24 +0000)]
Move definition of the Rayleigh number into the EquationData namespace as well.
git-svn-id: https://svn.dealii.org/trunk@16872
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bangerth [Sat, 20 Sep 2008 03:20:37 +0000 (03:20 +0000)]
Outlook.
git-svn-id: https://svn.dealii.org/trunk@16871
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bangerth [Sat, 20 Sep 2008 03:11:58 +0000 (03:11 +0000)]
Document smaller time step.
git-svn-id: https://svn.dealii.org/trunk@16870
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bangerth [Sat, 20 Sep 2008 03:01:34 +0000 (03:01 +0000)]
Describe the testcase.
git-svn-id: https://svn.dealii.org/trunk@16869
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bangerth [Sat, 20 Sep 2008 02:40:23 +0000 (02:40 +0000)]
Add pending directory, necessary for some older compilers.
git-svn-id: https://svn.dealii.org/trunk@16868
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bangerth [Sat, 20 Sep 2008 02:35:53 +0000 (02:35 +0000)]
Add forgotten expansions of Trilinos MPI vectors.
git-svn-id: https://svn.dealii.org/trunk@16867
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bangerth [Sat, 20 Sep 2008 02:28:58 +0000 (02:28 +0000)]
Upgrade to boost 1.36.
git-svn-id: https://svn.dealii.org/trunk@16866
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bangerth [Sat, 20 Sep 2008 02:24:46 +0000 (02:24 +0000)]
Import boost 1.36.
git-svn-id: https://svn.dealii.org/trunk@16865
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bangerth [Sat, 20 Sep 2008 02:20:21 +0000 (02:20 +0000)]
Remove old boost 1.33.1 version
git-svn-id: https://svn.dealii.org/trunk@16864
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bangerth [Sat, 20 Sep 2008 02:03:37 +0000 (02:03 +0000)]
Silence a warning.
git-svn-id: https://svn.dealii.org/trunk@16863
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bangerth [Fri, 19 Sep 2008 18:57:23 +0000 (18:57 +0000)]
Use a slightly smaller time step that is actually stable.
git-svn-id: https://svn.dealii.org/trunk@16861
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bangerth [Fri, 19 Sep 2008 18:55:49 +0000 (18:55 +0000)]
Use a slightly smaller time step that is actually stable.
git-svn-id: https://svn.dealii.org/trunk@16860
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kronbichler [Fri, 19 Sep 2008 13:54:29 +0000 (13:54 +0000)]
Fixed an error in ILU/IC preconditioner.
git-svn-id: https://svn.dealii.org/trunk@16858
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kronbichler [Fri, 19 Sep 2008 12:00:51 +0000 (12:00 +0000)]
A few more cosmetic changes.
git-svn-id: https://svn.dealii.org/trunk@16857
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kronbichler [Fri, 19 Sep 2008 11:52:44 +0000 (11:52 +0000)]
Fixed file ids.
git-svn-id: https://svn.dealii.org/trunk@16856
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kronbichler [Fri, 19 Sep 2008 11:45:20 +0000 (11:45 +0000)]
Implemented a few more wrappers to Trilinos Ifpack preconditioners (Jacobi, SOR, IC, ILU). Use the same interface as for all the other interfaces, i.e., let an initialize() function do the actual job.
git-svn-id: https://svn.dealii.org/trunk@16855
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kronbichler [Thu, 18 Sep 2008 16:50:52 +0000 (16:50 +0000)]
Fixed an error in vector declaration that prevented non-local elements from being written. Now, the bool fast in the reinit functions does not make much sense any more. Look at that another time.
git-svn-id: https://svn.dealii.org/trunk@16852
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kronbichler [Wed, 17 Sep 2008 14:49:15 +0000 (14:49 +0000)]
Fixed a problem in the setup of the null space in the ML preconditioner when run in parallel.
git-svn-id: https://svn.dealii.org/trunk@16844
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bangerth [Tue, 16 Sep 2008 20:39:36 +0000 (20:39 +0000)]
Make my recent change also work when using PETSC.
git-svn-id: https://svn.dealii.org/trunk@16841
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kronbichler [Tue, 16 Sep 2008 17:53:10 +0000 (17:53 +0000)]
There was an error in the constructor for a parallel Epetra_FECrsMatrix that did not allow us to write off-processor elements properly, which is now fixed.
git-svn-id: https://svn.dealii.org/trunk@16840
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kronbichler [Tue, 16 Sep 2008 16:44:25 +0000 (16:44 +0000)]
A few small updates in Trilinos wrapper classes.
git-svn-id: https://svn.dealii.org/trunk@16838
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kronbichler [Tue, 16 Sep 2008 14:08:15 +0000 (14:08 +0000)]
Don't need to compress vectors when running in serial.
git-svn-id: https://svn.dealii.org/trunk@16836
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kronbichler [Tue, 16 Sep 2008 14:06:41 +0000 (14:06 +0000)]
Make step-32 compliant with new TrilinosWrappers structure.
git-svn-id: https://svn.dealii.org/trunk@16835
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kronbichler [Tue, 16 Sep 2008 09:36:14 +0000 (09:36 +0000)]
A few changes that make the updated TrilinosWrappers vector classes compatible with the directory deal.II/.
git-svn-id: https://svn.dealii.org/trunk@16831
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kronbichler [Mon, 15 Sep 2008 18:15:45 +0000 (18:15 +0000)]
Need to update one more file.
git-svn-id: https://svn.dealii.org/trunk@16830
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kronbichler [Mon, 15 Sep 2008 18:11:22 +0000 (18:11 +0000)]
Changed implementation of Trilinos vectors in a way similar to the implementation of the PETSc wrapper classes, i.e., put parallel vectors in an MPI namespace and use a base class. Need to work on parallel performance a bit further. Still need to enable the proper operability of Trilinos vectors outside the lac/ directory.
git-svn-id: https://svn.dealii.org/trunk@16829
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