]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Wed, 13 May 2020 21:18:12 +0000 (15:18 -0600)]
Updates to the results section of step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:18:02 +0000 (15:18 -0600)]
Updates to the introduction of step-50.
Martin Kronbichler [Thu, 14 May 2020 20:18:30 +0000 (22:18 +0200)]
Merge pull request #10212 from masterleinad/takeover10208
[9.2] Take over #10208: Fix python FunctionManifold
Alexander Grayver [Thu, 14 May 2020 09:25:39 +0000 (11:25 +0200)]
Fix python FunctionManifold
Timo Heister [Thu, 14 May 2020 11:56:13 +0000 (07:56 -0400)]
Merge pull request #10203 from tamiko/pr_10201
[9.2.] Take over #10201
Timo Heister [Thu, 14 May 2020 00:29:47 +0000 (20:29 -0400)]
Merge pull request #10200 from masterleinad/fix_mpi_condense_petsc_complex_9_2
[9.2] Take over #10199: Choose output files for mpi/condense_01 correctly
Wolfgang Bangerth [Wed, 13 May 2020 23:43:42 +0000 (01:43 +0200)]
Merge pull request #10204 from tamiko/pr_10202
[9.2] Take over #10202 #10202 Update an entry in the changelog. See #10072
Wolfgang Bangerth [Wed, 13 May 2020 23:05:53 +0000 (17:05 -0600)]
Update an entry in the changelog.
Matthias Maier [Wed, 13 May 2020 22:54:10 +0000 (17:54 -0500)]
CMake: relax arpack and parpack library directory requirements
Some Linux distributions install the parallel libparpack.so* component
in an MPI vendor specific directory different from the location of the
serial libarpack.so* library. We can thus not assume that both are
located in the same directory.
Closes: #10197
Daniel Arndt [Wed, 13 May 2020 22:09:46 +0000 (18:09 -0400)]
Choose output files for mpi/condense_01 correctly
Wolfgang Bangerth [Wed, 13 May 2020 20:54:35 +0000 (22:54 +0200)]
Merge pull request #10196 from tamiko/pr_10195
[9.2] Take over #10195
Matthias Maier [Wed, 13 May 2020 19:19:18 +0000 (14:19 -0500)]
Doxygen: Fix include strip
This fixes a bug introduced in #10187
Timo Heister [Wed, 13 May 2020 18:38:07 +0000 (14:38 -0400)]
Merge pull request #10192 from tamiko/pr_10189
Take over #10189 and #10191
David Wells [Wed, 13 May 2020 17:32:21 +0000 (13:32 -0400)]
Merge pull request #10193 from masterleinad/take_10190
[9.2] Take over #10190: Run Travis on all branches
Daniel Arndt [Wed, 13 May 2020 16:41:20 +0000 (12:41 -0400)]
Run Travis on all branches
Matthias Maier [Wed, 13 May 2020 16:02:38 +0000 (11:02 -0500)]
Documentation: Treat code gallery projects as examples
Installing the code gallery projects as part of the html documentation
is not ideal. Let us install the code gallery projects as a sub
directory under the EXAMPLES_RELDIR instead:
examples/code-gallery/*
examples/step-*
Matthias Maier [Wed, 13 May 2020 16:46:31 +0000 (11:46 -0500)]
Documentation: fix make_gallery.pl
Otherwise newer doxygen does not parse the generated *.h files...
See #8972
Matthias Maier [Wed, 13 May 2020 16:48:22 +0000 (11:48 -0500)]
Merge pull request #10187 from tamiko/pr_10178
[9.2] Take over #10178
David Wells [Wed, 13 May 2020 16:01:08 +0000 (12:01 -0400)]
Merge pull request #10186 from tamiko/pr_10176
[9.2] Take over #10176
Matthias Maier [Wed, 13 May 2020 05:12:48 +0000 (00:12 -0500)]
doxygen: Strip full @CMAKE_SOURCE_DIR@ and @CMAKE_BINARY_DIR@
The current configuration fails to strip the repository path from source
directories, e.g., on the homepage we have for example:
"""
The documentation for this struct was generated from the following files:
deal.II/lac/petsc_precondition.h
/home/dealii/dealii/source/lac/petsc_precondition.cc
"""
With this change this now reads:
"""
The documentation for this struct was generated from the following files:
include/deal.II/lac/petsc_precondition.h
source/lac/petsc_precondition.cc
"""
Bruno Turcksin [Wed, 13 May 2020 02:11:32 +0000 (02:11 +0000)]
Silence deprecation warnings
Bruno Turcksin [Wed, 13 May 2020 02:03:05 +0000 (02:03 +0000)]
Fix comment
Bruno Turcksin [Wed, 13 May 2020 02:02:26 +0000 (02:02 +0000)]
Remove unusable variable
Bruno Turcksin [Wed, 13 May 2020 02:01:49 +0000 (02:01 +0000)]
Use sensible default parameter
Bruno Turcksin [Wed, 13 May 2020 02:00:50 +0000 (02:00 +0000)]
Fix test after some sadd and equ functions have been removed
David Wells [Wed, 13 May 2020 15:35:15 +0000 (11:35 -0400)]
Merge pull request #10185 from tamiko/pr_10179
[9.2] Take over #10179: contrib/utilities/makeofflinedoc.sh: Also install jpg
Matthias Maier [Wed, 13 May 2020 06:43:02 +0000 (01:43 -0500)]
contrib/utilities/makeofflinedoc.sh: Also install jpg
Timo Heister [Wed, 13 May 2020 14:25:47 +0000 (10:25 -0400)]
Merge pull request #10184 from masterleinad/fix_braces_47
[9.2] Take over #10183: Fix missing closing braces.
Wolfgang Bangerth [Wed, 13 May 2020 13:37:08 +0000 (07:37 -0600)]
Fix missing closing braces.
Martin Kronbichler [Wed, 13 May 2020 06:00:42 +0000 (08:00 +0200)]
Merge pull request #10177 from masterleinad/take_over_10161
[9.2] Take over #10161: Removed two variables which were not used in particles/utilities.h
Matthias Maier [Wed, 13 May 2020 03:41:31 +0000 (22:41 -0500)]
update VERSION for release
blaisb [Tue, 12 May 2020 20:14:06 +0000 (16:14 -0400)]
Removed two variables which were not used in particles/utilities.h
Matthias Maier [Wed, 13 May 2020 03:17:30 +0000 (22:17 -0500)]
Merge pull request #10159 from tjhei/jenkins_ci_branches
[9.2] Take over #10173: Jenkins: also test release branches
Daniel Arndt [Wed, 13 May 2020 03:10:30 +0000 (23:10 -0400)]
Merge pull request #10169 from tamiko/pr_10168
Daniel Arndt [Wed, 13 May 2020 01:12:43 +0000 (21:12 -0400)]
Merge pull request #10172 from tamiko/pr_10171
Timo Heister [Wed, 13 May 2020 01:11:04 +0000 (21:11 -0400)]
Merge pull request #10170 from tamiko/remove_test
[9.2] remove test mpi/p4est_bug
Matthias Maier [Wed, 13 May 2020 00:58:08 +0000 (19:58 -0500)]
update fe_series tests again to latest changes
Daniel Arndt [Wed, 13 May 2020 00:53:49 +0000 (20:53 -0400)]
Merge pull request #10167 from tamiko/pr_10166
Matthias Maier [Wed, 13 May 2020 00:49:44 +0000 (19:49 -0500)]
remove test mpi/p4est_bug
This test will actually make it past the expect=run stage if p4est is
not compiled with debug asserts. This is unfortunately independent of
whether deal.II is in release or debug mode.
Matthias Maier [Wed, 13 May 2020 00:27:35 +0000 (19:27 -0500)]
do not print mesh in opencascade/stl_* tests
These tests create a mesh (with our opencascade) interface.
Unfortunately, the result pretty much depends on the mesher being used
(which changes between opencascade and oce versions), the standard
library version (libstdc++ versus libc++) and the CPU architecture.
I initially thought that the test result would not depend on the machine
this test is running on and created the output alternatives
(*.output.opencascade7.4.0) on my laptop. Evidently this did not fix
this test on our main tester. Let's simply remove the output and just
check that the code path runs without throwing an error.
Matthias Maier [Tue, 12 May 2020 22:01:37 +0000 (17:01 -0500)]
examples/step-69: fix texttt formulas
Timo Heister [Tue, 12 May 2020 19:14:42 +0000 (15:14 -0400)]
Jenknis: also test release branches
Matthias Maier [Tue, 12 May 2020 18:03:47 +0000 (13:03 -0500)]
update AUTHORS
Matthias Maier [Tue, 12 May 2020 18:02:58 +0000 (13:02 -0500)]
update VERSION
David Wells [Tue, 12 May 2020 17:56:46 +0000 (13:56 -0400)]
Merge pull request #10157 from tamiko/update_version
Release step 5: update VERSION
David Wells [Tue, 12 May 2020 17:56:36 +0000 (13:56 -0400)]
Merge pull request #10156 from tamiko/update-tag-file
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 17:55:16 +0000 (12:55 -0500)]
Merge pull request #10154 from tamiko/update-changes-file
Release step 1: Update changelog file
Matthias Maier [Tue, 12 May 2020 17:28:31 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:25 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:16 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:08 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:02 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:55 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:44 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:20 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:06 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:17:09 +0000 (12:17 -0500)]
add dummy entries to make travis happy
Matthias Maier [Tue, 12 May 2020 17:12:07 +0000 (12:12 -0500)]
fix year range
Martin Kronbichler [Tue, 12 May 2020 17:10:52 +0000 (19:10 +0200)]
Merge pull request #10155 from masterleinad/instantiate_opencascade
Instantiate OpenCASCADE
Matthias Maier [Tue, 12 May 2020 17:04:54 +0000 (12:04 -0500)]
update VERSION
Matthias Maier [Tue, 12 May 2020 17:01:49 +0000 (12:01 -0500)]
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 16:59:15 +0000 (11:59 -0500)]
Remove now obsolete files.
Matthias Maier [Tue, 12 May 2020 16:58:22 +0000 (11:58 -0500)]
Update the changelog file for the release.
Daniel Arndt [Tue, 12 May 2020 16:47:18 +0000 (12:47 -0400)]
Instantiate OpenCASCADE
Martin Kronbichler [Tue, 12 May 2020 16:13:19 +0000 (18:13 +0200)]
Merge pull request #7513 from marcfehling/smoothness-estimator-2
Introduced SmoothnessEstimator.
Matthias Maier [Tue, 12 May 2020 15:27:25 +0000 (10:27 -0500)]
Merge pull request #10152 from marcfehling/prediction-extension
Updated doc for hp::Refinement::predict_error().
marcfehling [Tue, 12 May 2020 15:03:40 +0000 (17:03 +0200)]
Update include/deal.II/hp/refinement.h
Co-authored-by: Timo Heister <timo.heister@gmail.com>
Matthias Maier [Tue, 12 May 2020 04:48:13 +0000 (23:48 -0500)]
fix compilation
Matthias Maier [Mon, 11 May 2020 19:48:19 +0000 (14:48 -0500)]
Address typos brought up in review comments
Update include/deal.II/hp/fe_collection.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Co-authored-by: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
Marc Fehling [Wed, 29 Apr 2020 17:13:58 +0000 (19:13 +0200)]
Added SmoothnessEstimator::default_fe_series() functions returning default FESeries objects.
Removed default constructor and initialize() functions for FESeries objects.
Marc Fehling [Mon, 7 Jan 2019 12:00:03 +0000 (13:00 +0100)]
SmoothnessEstimator: Enhancements regarding applicability.
Denis Davydov [Fri, 7 Dec 2018 19:01:57 +0000 (20:01 +0100)]
SmoothnessEstimator: Implementation with dedicated coefficient decay functions for both Fourier and Legendre series expansions individually.
Marc Fehling [Wed, 21 Nov 2018 10:07:00 +0000 (11:07 +0100)]
SmoothnessEstimator: Initial implementation with FESeries template.
Marc Fehling [Tue, 12 May 2020 13:49:09 +0000 (15:49 +0200)]
No more restriction on isotropic refinement for hp::Refinement::predict_error().
Marc Fehling [Tue, 12 May 2020 13:47:01 +0000 (15:47 +0200)]
Updated doc for hp::Refinement::predict_error().
Martin Kronbichler [Tue, 12 May 2020 10:34:02 +0000 (12:34 +0200)]
Merge pull request #8603 from tjhei/add_p4est_fail_test
add failing p4est test
Martin Kronbichler [Tue, 12 May 2020 09:10:57 +0000 (11:10 +0200)]
Merge pull request #9954 from marcfehling/prediction-extension
Reworked error prediction algorithm.
Martin Kronbichler [Tue, 12 May 2020 08:15:28 +0000 (10:15 +0200)]
Merge pull request #10148 from tjhei/github-actions-windows
github actions: split windows build
Martin Kronbichler [Tue, 12 May 2020 05:56:23 +0000 (07:56 +0200)]
Merge pull request #10149 from tamiko/fix_compilation_gcc_4.9.4
Fix compilation with gcc-4.9.4
Martin Kronbichler [Tue, 12 May 2020 05:13:40 +0000 (07:13 +0200)]
Merge pull request #10147 from tjhei/doxy_grid_gen
doxygen: disable stuff in grid_generator.cc
Matthias Maier [Tue, 12 May 2020 04:45:42 +0000 (23:45 -0500)]
Merge pull request #9807 from kronbichler/improved_shell
Add additional cell options for 3D hyper shell
Daniel Arndt [Tue, 12 May 2020 03:19:28 +0000 (23:19 -0400)]
Use 64bit toolset variant
Daniel Arndt [Tue, 12 May 2020 01:31:12 +0000 (21:31 -0400)]
Merge pull request #10150 from tamiko/fix_a_test_22
David Wells [Tue, 12 May 2020 00:27:25 +0000 (20:27 -0400)]
Merge pull request #10151 from tamiko/fix_a_test_23
Test mpi/hp_step-4 disable test for 64bit indices
Matthias Maier [Mon, 11 May 2020 21:44:09 +0000 (16:44 -0500)]
Test petsc/reinit_preconditioner_0*: disable for 64bit indices
Matthias Maier [Mon, 11 May 2020 22:08:29 +0000 (17:08 -0500)]
Test mpi/hp_step-4 disable test for 64bit indices
Timo Heister [Mon, 19 Aug 2019 17:17:46 +0000 (13:17 -0400)]
add failing p4est test
This is a simple way to trigger
https://github.com/dealii/dealii/issues/7428
Matthias Maier [Mon, 11 May 2020 21:19:08 +0000 (16:19 -0500)]
Fix compilation with gcc-4.9.4
Closes: https://github.com/dealii/dealii/issues/10146
Timo Heister [Mon, 11 May 2020 20:34:43 +0000 (16:34 -0400)]
github actions: split windows build
- move windows build out of main.yml
- test VS 2017 and VS 2019
Timo Heister [Mon, 11 May 2020 20:54:08 +0000 (16:54 -0400)]
doxygen: disable stuff in grid_generator.cc
see #9914
Martin Kronbichler [Mon, 11 May 2020 20:48:38 +0000 (22:48 +0200)]
Merge pull request #10144 from tjhei/step-50-future
step-50: Possible extensions
Martin Kronbichler [Mon, 11 May 2020 20:36:52 +0000 (22:36 +0200)]
Merge pull request #10145 from tamiko/fix_a_test_21
Test boost/extract_representative_set_02: add output variant, rename test
Matthias Maier [Mon, 11 May 2020 19:56:00 +0000 (14:56 -0500)]
Address review comments (typos)
Update include/deal.II/hp/refinement.h
Update include/deal.II/numerics/adaptation_strategies.h
Update include/deal.II/numerics/adaptation_strategies.h
Co-authored-by: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
Marc Fehling [Sat, 2 May 2020 22:29:42 +0000 (00:29 +0200)]
Formula for hp-refinement: Adjusted doc to what we are actually doing in the code.
Marc Fehling [Fri, 24 Apr 2020 21:24:10 +0000 (23:24 +0200)]
Reworked error prediction algorithm.
Marc Fehling [Fri, 24 Apr 2020 21:23:08 +0000 (23:23 +0200)]
Refactored AdaptationStrategies namespace.
Matthias Maier [Mon, 11 May 2020 18:52:44 +0000 (13:52 -0500)]
Test boost/extract_representative_set_02: add output variant
The actual final set of bounding boxes computed with boost depends on
the standard library being used. Funny enough the difference is only one
cell on one processor when switching from libc++ to libstc++. The output
seems to be stable with respect to standard library. I have not
investigated further, but I would bet that it boils down to an
(unstable) sort algorithm being used in the boost implementation.
For now, just provide an output variant. If this test fails again, we
might have to think about another alternative.
Matthias Maier [Mon, 11 May 2020 18:37:19 +0000 (13:37 -0500)]
Tests: boost/extract_*: reorganize code and rename test (fix typo)
Timo Heister [Mon, 11 May 2020 18:35:12 +0000 (14:35 -0400)]
step-50: Possible extensions
Daniel Arndt [Mon, 11 May 2020 16:52:17 +0000 (12:52 -0400)]
Merge pull request #10143 from tamiko/fix_a_test_20
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