]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
11 years agoupdate test (this test used to print nan/-nan on different compilers, now TimerOutput...
Timo Heister [Fri, 26 Oct 2012 20:02:06 +0000 (20:02 +0000)]
update test (this test used to print nan/-nan on different compilers, now TimerOutput is fixed to just print 0.0)

git-svn-id: https://svn.dealii.org/trunk@27219 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoavoid printing NaN in TimerOutput.
Timo Heister [Fri, 26 Oct 2012 20:01:22 +0000 (20:01 +0000)]
avoid printing NaN in TimerOutput.

git-svn-id: https://svn.dealii.org/trunk@27218 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
Martin Steigemann [Fri, 26 Oct 2012 16:12:04 +0000 (16:12 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27209 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
Martin Steigemann [Fri, 26 Oct 2012 16:11:16 +0000 (16:11 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27208 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoInterface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre...
Martin Steigemann [Fri, 26 Oct 2012 16:10:53 +0000 (16:10 +0000)]
Interface to PETSc::PreconditionNone and ParaSails Preconditioner from the Hypre Suite

git-svn-id: https://svn.dealii.org/trunk@27207 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoremove warning
Timo Heister [Fri, 26 Oct 2012 15:14:04 +0000 (15:14 +0000)]
remove warning

git-svn-id: https://svn.dealii.org/trunk@27205 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd VectorInfo class
Guido Kanschat [Fri, 26 Oct 2012 10:07:46 +0000 (10:07 +0000)]
add VectorInfo class

git-svn-id: https://svn.dealii.org/trunk@27202 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCatch adding NaN into a Trilinos SparseMatrix in all cases (in debug mode).
Timo Heister [Thu, 25 Oct 2012 14:10:42 +0000 (14:10 +0000)]
Catch adding NaN into a Trilinos SparseMatrix in all cases (in debug mode).

git-svn-id: https://svn.dealii.org/trunk@27201 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a typo introduced with r27140
Matthias Maier [Wed, 24 Oct 2012 16:53:30 +0000 (16:53 +0000)]
Fix a typo introduced with r27140

git-svn-id: https://svn.dealii.org/trunk@27196 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAugment documentation.
Wolfgang Bangerth [Wed, 24 Oct 2012 15:38:38 +0000 (15:38 +0000)]
Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@27192 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoEnable symmetry mode and pick data from the PETSc environment.
Wolfgang Bangerth [Wed, 24 Oct 2012 02:44:37 +0000 (02:44 +0000)]
Enable symmetry mode and pick data from the PETSc environment.

git-svn-id: https://svn.dealii.org/trunk@27190 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix Trilinos tests for Trilinos 11.
Timo Heister [Mon, 22 Oct 2012 21:31:01 +0000 (21:31 +0000)]
fix Trilinos tests for Trilinos 11.

git-svn-id: https://svn.dealii.org/trunk@27172 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agomore fixes for Trilinos 11.
Timo Heister [Mon, 22 Oct 2012 21:30:26 +0000 (21:30 +0000)]
more fixes for Trilinos 11.

git-svn-id: https://svn.dealii.org/trunk@27171 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofixes for trilinos 11. EPetra now supports long and int which causes ambiguous calls...
Timo Heister [Mon, 22 Oct 2012 21:05:40 +0000 (21:05 +0000)]
fixes for trilinos 11. EPetra now supports long and int which causes ambiguous calls when using unsigned int.

git-svn-id: https://svn.dealii.org/trunk@27170 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRe-word the supported platforms list. Update mailing list address.
Wolfgang Bangerth [Mon, 22 Oct 2012 15:42:38 +0000 (15:42 +0000)]
Re-word the supported platforms list. Update mailing list address.

git-svn-id: https://svn.dealii.org/trunk@27163 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRe-word the supported platforms list. Update mailing list address.
Wolfgang Bangerth [Mon, 22 Oct 2012 15:41:15 +0000 (15:41 +0000)]
Re-word the supported platforms list. Update mailing list address.

git-svn-id: https://svn.dealii.org/trunk@27162 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove a paragraph.
Wolfgang Bangerth [Mon, 22 Oct 2012 15:32:06 +0000 (15:32 +0000)]
Remove a paragraph.

git-svn-id: https://svn.dealii.org/trunk@27161 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoProduce an error for an operation that doesn't make any sense in 1d.
Wolfgang Bangerth [Sat, 20 Oct 2012 02:32:21 +0000 (02:32 +0000)]
Produce an error for an operation that doesn't make any sense in 1d.

git-svn-id: https://svn.dealii.org/trunk@27150 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix warning (thanks Uwe)
Timo Heister [Thu, 18 Oct 2012 16:17:11 +0000 (16:17 +0000)]
fix warning (thanks Uwe)

git-svn-id: https://svn.dealii.org/trunk@27142 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a misleading sentence in the documentation.
Wolfgang Bangerth [Wed, 17 Oct 2012 19:24:43 +0000 (19:24 +0000)]
Fix a misleading sentence in the documentation.

git-svn-id: https://svn.dealii.org/trunk@27140 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a misleading sentence in the documentation.
Wolfgang Bangerth [Wed, 17 Oct 2012 18:58:00 +0000 (18:58 +0000)]
Fix a misleading sentence in the documentation.

git-svn-id: https://svn.dealii.org/trunk@27139 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdate publication 2013.
Toby D. Young [Tue, 16 Oct 2012 11:48:47 +0000 (11:48 +0000)]
Update publication 2013.

git-svn-id: https://svn.dealii.org/trunk@27135 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd some to the documentation.
Wolfgang Bangerth [Mon, 15 Oct 2012 19:47:48 +0000 (19:47 +0000)]
Add some to the documentation.

git-svn-id: https://svn.dealii.org/trunk@27130 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove a couple of outdated comments.
Wolfgang Bangerth [Mon, 15 Oct 2012 18:47:10 +0000 (18:47 +0000)]
Remove a couple of outdated comments.

git-svn-id: https://svn.dealii.org/trunk@27128 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoTake over 26990 from branch_cmake as well.
Wolfgang Bangerth [Sun, 14 Oct 2012 22:36:51 +0000 (22:36 +0000)]
Take over 26990 from branch_cmake as well.

git-svn-id: https://svn.dealii.org/trunk@27125 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAlso check for sys/resource.h.
Wolfgang Bangerth [Sun, 14 Oct 2012 22:25:21 +0000 (22:25 +0000)]
Also check for sys/resource.h.

git-svn-id: https://svn.dealii.org/trunk@27124 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoTake over most of what's in patches r26981:26988 on branch_cmake.
Wolfgang Bangerth [Sun, 14 Oct 2012 22:09:32 +0000 (22:09 +0000)]
Take over most of what's in patches r26981:26988 on branch_cmake.

git-svn-id: https://svn.dealii.org/trunk@27123 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCheck for availability of <sys/time.h>.
Wolfgang Bangerth [Sun, 14 Oct 2012 21:59:54 +0000 (21:59 +0000)]
Check for availability of <sys/time.h>.

git-svn-id: https://svn.dealii.org/trunk@27122 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove tests from configure.in that had previously been removed from aclocal.m4 and...
Wolfgang Bangerth [Sun, 14 Oct 2012 21:53:15 +0000 (21:53 +0000)]
Remove tests from configure.in that had previously been removed from aclocal.m4 and have since been giving us errors onto the console.

git-svn-id: https://svn.dealii.org/trunk@27121 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUndo accidental merge of this file.
Wolfgang Bangerth [Sat, 13 Oct 2012 21:19:11 +0000 (21:19 +0000)]
Undo accidental merge of this file.

git-svn-id: https://svn.dealii.org/trunk@27111 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoReintegrate branch_eliminate_iterator_functions.
Wolfgang Bangerth [Sat, 13 Oct 2012 21:12:41 +0000 (21:12 +0000)]
Reintegrate branch_eliminate_iterator_functions.

git-svn-id: https://svn.dealii.org/trunk@27110 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix typo.
Wolfgang Bangerth [Sat, 13 Oct 2012 12:39:13 +0000 (12:39 +0000)]
Fix typo.

git-svn-id: https://svn.dealii.org/trunk@27107 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove references to merged branched from mainline.
Wolfgang Bangerth [Sat, 13 Oct 2012 12:24:37 +0000 (12:24 +0000)]
Remove references to merged branched from mainline.

git-svn-id: https://svn.dealii.org/trunk@27104 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoNew test.
Wolfgang Bangerth [Fri, 12 Oct 2012 16:20:34 +0000 (16:20 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27088 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a few markup problems.
Wolfgang Bangerth [Fri, 12 Oct 2012 13:53:06 +0000 (13:53 +0000)]
Fix a few markup problems.

git-svn-id: https://svn.dealii.org/trunk@27083 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agohopefully make numbering less depending on roundoff errors
Guido Kanschat [Fri, 12 Oct 2012 13:47:47 +0000 (13:47 +0000)]
hopefully make numbering less depending on roundoff errors

git-svn-id: https://svn.dealii.org/trunk@27081 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoWrite glossary entries for user flags and user data. Link to it.
Wolfgang Bangerth [Fri, 12 Oct 2012 13:21:30 +0000 (13:21 +0000)]
Write glossary entries for user flags and user data. Link to it.

git-svn-id: https://svn.dealii.org/trunk@27080 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAnother test.
Wolfgang Bangerth [Fri, 12 Oct 2012 03:12:30 +0000 (03:12 +0000)]
Another test.

git-svn-id: https://svn.dealii.org/trunk@27069 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoNew test.
Wolfgang Bangerth [Fri, 12 Oct 2012 03:08:44 +0000 (03:08 +0000)]
New test.

git-svn-id: https://svn.dealii.org/trunk@27068 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix language.
Wolfgang Bangerth [Thu, 11 Oct 2012 23:58:40 +0000 (23:58 +0000)]
Fix language.

git-svn-id: https://svn.dealii.org/trunk@27065 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoProperly instantiate a few static variables.
Wolfgang Bangerth [Thu, 11 Oct 2012 23:58:19 +0000 (23:58 +0000)]
Properly instantiate a few static variables.

git-svn-id: https://svn.dealii.org/trunk@27064 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMake interface similar to the one for UMFPACK.
Markus Buerg [Thu, 11 Oct 2012 09:23:54 +0000 (09:23 +0000)]
Make interface similar to the one for UMFPACK.

git-svn-id: https://svn.dealii.org/trunk@27061 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoupdated bench.sh to output results from 3 tests per revision
cazamias [Wed, 10 Oct 2012 21:01:40 +0000 (21:01 +0000)]
updated bench.sh to output results from 3 tests per revision

git-svn-id: https://svn.dealii.org/trunk@27060 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAvoid a warning about a potentially uninitialized variable.
Wolfgang Bangerth [Wed, 10 Oct 2012 20:59:51 +0000 (20:59 +0000)]
Avoid a warning about a potentially uninitialized variable.

git-svn-id: https://svn.dealii.org/trunk@27059 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdated get_times.cc to collect minimum times of multiple tests
cazamias [Wed, 10 Oct 2012 17:03:36 +0000 (17:03 +0000)]
Updated get_times.cc to collect minimum times of multiple tests

git-svn-id: https://svn.dealii.org/trunk@27057 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agospeed up test
Timo Heister [Wed, 10 Oct 2012 15:52:45 +0000 (15:52 +0000)]
speed up test

git-svn-id: https://svn.dealii.org/trunk@27054 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix compile issue with clang++-v3.1
Matthias Maier [Wed, 10 Oct 2012 13:22:55 +0000 (13:22 +0000)]
Fix compile issue with clang++-v3.1

git-svn-id: https://svn.dealii.org/trunk@27048 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoActually instantiate SparseDirectMumps::initialize to make gcc-4.7 happy
Matthias Maier [Wed, 10 Oct 2012 08:17:13 +0000 (08:17 +0000)]
Actually instantiate SparseDirectMumps::initialize to make gcc-4.7 happy

Also fixup some unsigned int* -> int* type conversions gcc-4.7 barks about very
loudly because they are not permitted by ISO C++ (ISO C++ 11)

git-svn-id: https://svn.dealii.org/trunk@27044 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a typo
Matthias Maier [Wed, 10 Oct 2012 07:43:14 +0000 (07:43 +0000)]
Fix a typo

git-svn-id: https://svn.dealii.org/trunk@27043 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agotreat lucky breakdown in GMRES and FGMRES
Timo Heister [Tue, 9 Oct 2012 22:08:00 +0000 (22:08 +0000)]
treat lucky breakdown in GMRES and FGMRES

git-svn-id: https://svn.dealii.org/trunk@27040 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoalso test fgmres for lucky breakdown
Timo Heister [Tue, 9 Oct 2012 22:02:45 +0000 (22:02 +0000)]
also test fgmres for lucky breakdown

git-svn-id: https://svn.dealii.org/trunk@27039 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd test for lucky breakdown
Timo Heister [Tue, 9 Oct 2012 21:52:30 +0000 (21:52 +0000)]
add test for lucky breakdown

git-svn-id: https://svn.dealii.org/trunk@27038 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdate test result.
Wolfgang Bangerth [Tue, 9 Oct 2012 13:57:38 +0000 (13:57 +0000)]
Update test result.

git-svn-id: https://svn.dealii.org/trunk@27030 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agotreat tke lucky breakdown, otherwise we had devision by zero
Baerbel Jannsen [Tue, 9 Oct 2012 12:46:18 +0000 (12:46 +0000)]
treat tke lucky breakdown, otherwise we had devision by zero

git-svn-id: https://svn.dealii.org/trunk@27026 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoReally go through all neighbors of a vertex.
Wolfgang Bangerth [Tue, 9 Oct 2012 12:44:57 +0000 (12:44 +0000)]
Really go through all neighbors of a vertex.

git-svn-id: https://svn.dealii.org/trunk@27025 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd comment to SCALAPACK section.
Markus Buerg [Mon, 8 Oct 2012 18:31:56 +0000 (18:31 +0000)]
Add comment to SCALAPACK section.

git-svn-id: https://svn.dealii.org/trunk@27014 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a problem in GridTools::find_cells_adjacent_to_vertex with anisotropic refinement.
Wolfgang Bangerth [Mon, 8 Oct 2012 17:31:55 +0000 (17:31 +0000)]
Fix a problem in GridTools::find_cells_adjacent_to_vertex with anisotropic refinement.

git-svn-id: https://svn.dealii.org/trunk@27010 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix typo
Timo Heister [Mon, 8 Oct 2012 14:24:49 +0000 (14:24 +0000)]
fix typo

git-svn-id: https://svn.dealii.org/trunk@27005 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUndo r26920 since that appears to have led to numerous testsuite failures.
Wolfgang Bangerth [Mon, 8 Oct 2012 12:31:45 +0000 (12:31 +0000)]
Undo r26920 since that appears to have led to numerous testsuite failures.

git-svn-id: https://svn.dealii.org/trunk@27002 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAvoid warning about unused argument.
Wolfgang Bangerth [Mon, 8 Oct 2012 11:52:33 +0000 (11:52 +0000)]
Avoid warning about unused argument.

git-svn-id: https://svn.dealii.org/trunk@27000 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSimplify code.
Wolfgang Bangerth [Mon, 8 Oct 2012 03:05:13 +0000 (03:05 +0000)]
Simplify code.

git-svn-id: https://svn.dealii.org/trunk@26999 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoNew, failing test.
Wolfgang Bangerth [Mon, 8 Oct 2012 02:38:53 +0000 (02:38 +0000)]
New, failing test.

git-svn-id: https://svn.dealii.org/trunk@26995 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoEdited plot.sh to use test parameter
cazamias [Wed, 3 Oct 2012 21:57:45 +0000 (21:57 +0000)]
Edited plot.sh to use test parameter

git-svn-id: https://svn.dealii.org/trunk@26938 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdated bench.sh to extract names
cazamias [Wed, 3 Oct 2012 21:50:57 +0000 (21:50 +0000)]
Updated bench.sh to extract names

git-svn-id: https://svn.dealii.org/trunk@26937 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoDefine
Wolfgang Bangerth [Wed, 3 Oct 2012 18:33:04 +0000 (18:33 +0000)]
Define
   DEAL_II_PETSC_LIBDIR     = $(DEAL_II_PETSC_DIR)/$(DEAL_II_PETSC_ARCH)/lib
since this variable is used in source/Makefile.

git-svn-id: https://svn.dealii.org/trunk@26936 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoTake over patches 26839 to 26844 from Matthias' branch for cmake conversion. These...
Wolfgang Bangerth [Tue, 2 Oct 2012 05:32:32 +0000 (05:32 +0000)]
Take over patches 26839 to 26844 from Matthias' branch for cmake conversion. These patches clean up compiler bug tests that are from the gcc 2.95 and 3.x era and almost certainly no longer apply to the current crop of compilers we have.

git-svn-id: https://svn.dealii.org/trunk@26920 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdate documentation in a couple of places.
Wolfgang Bangerth [Sun, 30 Sep 2012 16:06:12 +0000 (16:06 +0000)]
Update documentation in a couple of places.

git-svn-id: https://svn.dealii.org/trunk@26891 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove some old parts of the code dealing with PETSc versions prior to 2.3. Add some...
Wolfgang Bangerth [Fri, 28 Sep 2012 23:29:04 +0000 (23:29 +0000)]
Remove some old parts of the code dealing with PETSc versions prior to 2.3. Add some comments.

git-svn-id: https://svn.dealii.org/trunk@26874 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agosimplify more dublicated code in fe_system
Timo Heister [Fri, 28 Sep 2012 21:56:08 +0000 (21:56 +0000)]
simplify more dublicated code in fe_system

git-svn-id: https://svn.dealii.org/trunk@26867 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agosimplify dublicated code in fe_system
Timo Heister [Fri, 28 Sep 2012 21:49:00 +0000 (21:49 +0000)]
simplify dublicated code in fe_system

git-svn-id: https://svn.dealii.org/trunk@26866 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agomove test into bits because it works now
Timo Heister [Fri, 28 Sep 2012 19:38:07 +0000 (19:38 +0000)]
move test into bits because it works now

git-svn-id: https://svn.dealii.org/trunk@26865 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoupdate test output
Timo Heister [Fri, 28 Sep 2012 19:33:56 +0000 (19:33 +0000)]
update test output

git-svn-id: https://svn.dealii.org/trunk@26864 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoupdate tests for FESystem
Timo Heister [Fri, 28 Sep 2012 19:32:59 +0000 (19:32 +0000)]
update tests for FESystem

git-svn-id: https://svn.dealii.org/trunk@26863 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFESystem can now deal with n_elements==0 for a block. Remove a ton of dublicated...
Timo Heister [Fri, 28 Sep 2012 19:32:18 +0000 (19:32 +0000)]
FESystem can now deal with n_elements==0 for a block. Remove a ton of dublicated code in the process.

git-svn-id: https://svn.dealii.org/trunk@26862 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoChange make_dependencies to ignore -D command line options rather than error out
Eric Heien [Fri, 28 Sep 2012 18:24:15 +0000 (18:24 +0000)]
Change make_dependencies to ignore -D command line options rather than error out

git-svn-id: https://svn.dealii.org/trunk@26857 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMove a piece of code where it is necessary.
Wolfgang Bangerth [Fri, 28 Sep 2012 18:04:37 +0000 (18:04 +0000)]
Move a piece of code where it is necessary.

git-svn-id: https://svn.dealii.org/trunk@26856 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agobenchmark: add test for plotting
Timo Heister [Fri, 28 Sep 2012 16:22:30 +0000 (16:22 +0000)]
benchmark: add test for plotting

git-svn-id: https://svn.dealii.org/trunk@26855 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoextend documentation
Timo Heister [Fri, 28 Sep 2012 15:36:01 +0000 (15:36 +0000)]
extend documentation

git-svn-id: https://svn.dealii.org/trunk@26848 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agotypo in documentation
Timo Heister [Fri, 28 Sep 2012 15:34:14 +0000 (15:34 +0000)]
typo in documentation

git-svn-id: https://svn.dealii.org/trunk@26847 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSay which section can't be entered in an assertion.
Wolfgang Bangerth [Fri, 28 Sep 2012 15:33:06 +0000 (15:33 +0000)]
Say which section can't be entered in an assertion.

git-svn-id: https://svn.dealii.org/trunk@26846 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix the way we let the normalize.pl script know about where the deal.II directory is.
Wolfgang Bangerth [Fri, 28 Sep 2012 12:56:27 +0000 (12:56 +0000)]
Fix the way we let the normalize.pl script know about where the deal.II directory is.

git-svn-id: https://svn.dealii.org/trunk@26834 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFind the path to deal.II some other way.
Wolfgang Bangerth [Fri, 28 Sep 2012 02:40:49 +0000 (02:40 +0000)]
Find the path to deal.II some other way.

git-svn-id: https://svn.dealii.org/trunk@26818 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdate.
Wolfgang Bangerth [Fri, 28 Sep 2012 02:40:23 +0000 (02:40 +0000)]
Update.

git-svn-id: https://svn.dealii.org/trunk@26817 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove this file. I've put it on the google code wiki.
Wolfgang Bangerth [Fri, 28 Sep 2012 00:22:49 +0000 (00:22 +0000)]
Remove this file. I've put it on the google code wiki.

git-svn-id: https://svn.dealii.org/trunk@26812 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove now deleted files from the list of things where stuff has to be substitutes.
Wolfgang Bangerth [Thu, 27 Sep 2012 23:57:53 +0000 (23:57 +0000)]
Remove now deleted files from the list of things where stuff has to be substitutes.

git-svn-id: https://svn.dealii.org/trunk@26811 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agonicer error message when refining an empty Triangulation
Timo Heister [Thu, 27 Sep 2012 22:14:23 +0000 (22:14 +0000)]
nicer error message when refining an empty Triangulation

git-svn-id: https://svn.dealii.org/trunk@26810 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix benchmark script loop
Timo Heister [Thu, 27 Sep 2012 19:03:14 +0000 (19:03 +0000)]
fix benchmark script loop

git-svn-id: https://svn.dealii.org/trunk@26804 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd Assert for make_periodicity_constraints for a distributed Triangulation
Timo Heister [Thu, 27 Sep 2012 18:51:52 +0000 (18:51 +0000)]
add Assert for make_periodicity_constraints for a distributed Triangulation

git-svn-id: https://svn.dealii.org/trunk@26803 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix typo in comment
Timo Heister [Thu, 27 Sep 2012 18:49:46 +0000 (18:49 +0000)]
fix typo in comment

git-svn-id: https://svn.dealii.org/trunk@26802 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoimprove documentation for make_periodicity_constraints
Timo Heister [Thu, 27 Sep 2012 18:26:37 +0000 (18:26 +0000)]
improve documentation for make_periodicity_constraints

git-svn-id: https://svn.dealii.org/trunk@26801 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove from here since it has moved to the homepage/RELEASE directory.
Wolfgang Bangerth [Thu, 27 Sep 2012 17:26:27 +0000 (17:26 +0000)]
Remove from here since it has moved to the homepage/RELEASE directory.

git-svn-id: https://svn.dealii.org/trunk@26800 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSet properties.
Wolfgang Bangerth [Thu, 27 Sep 2012 17:01:58 +0000 (17:01 +0000)]
Set properties.

git-svn-id: https://svn.dealii.org/trunk@26798 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSet properties.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:59:11 +0000 (16:59 +0000)]
Set properties.

git-svn-id: https://svn.dealii.org/trunk@26797 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix indentation.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:58:59 +0000 (16:58 +0000)]
Fix indentation.

git-svn-id: https://svn.dealii.org/trunk@26796 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoOnly output a list of parameters if there are any. Otherwise we
Wolfgang Bangerth [Thu, 27 Sep 2012 16:58:13 +0000 (16:58 +0000)]
Only output a list of parameters if there are any. Otherwise we
end up with an empty {itemize} list which latex does not like.

git-svn-id: https://svn.dealii.org/trunk@26795 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMove the 'normalize' and 'status_to_report' scripts to the tests directory.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:54:06 +0000 (16:54 +0000)]
Move the 'normalize' and 'status_to_report' scripts to the tests directory.

git-svn-id: https://svn.dealii.org/trunk@26794 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a bunch of malformed indentations to make merging from mainline less painful.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:52:31 +0000 (16:52 +0000)]
Fix a bunch of malformed indentations to make merging from mainline less painful.

git-svn-id: https://svn.dealii.org/trunk@26793 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove a subdirectory that only contains tools we never seem to
Wolfgang Bangerth [Thu, 27 Sep 2012 16:52:25 +0000 (16:52 +0000)]
Remove a subdirectory that only contains tools we never seem to
use.

git-svn-id: https://svn.dealii.org/trunk@26792 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoConvert several tutorial programs to the ComponentMask approach.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:52:24 +0000 (16:52 +0000)]
Convert several tutorial programs to the ComponentMask approach.

git-svn-id: https://svn.dealii.org/trunk@26791 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix one place where the syntax has to be adjusted to the new ComponentMask class.
Wolfgang Bangerth [Thu, 27 Sep 2012 16:52:19 +0000 (16:52 +0000)]
Fix one place where the syntax has to be adjusted to the new ComponentMask class.

git-svn-id: https://svn.dealii.org/trunk@26790 0785d39b-7218-0410-832d-ea1e28bc413d


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