]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
8 years agoMerge pull request #2943 from tjhei/add_newlines
Denis Davydov [Tue, 9 Aug 2016 19:50:21 +0000 (21:50 +0200)]
Merge pull request #2943 from tjhei/add_newlines

add newlines at end of files

8 years agoadd newlines at end of files 2943/head
Timo Heister [Tue, 9 Aug 2016 19:48:27 +0000 (15:48 -0400)]
add newlines at end of files

8 years agoMerge pull request #2938 from davydden/feature/gmg_coarse_smoother
Martin Kronbichler [Tue, 9 Aug 2016 19:34:50 +0000 (21:34 +0200)]
Merge pull request #2938 from davydden/feature/gmg_coarse_smoother

GMG: coarse smoother and linear operator

8 years agoMerge pull request #2941 from bangerth/fix-signature-of-rand
David Wells [Tue, 9 Aug 2016 19:07:28 +0000 (15:07 -0400)]
Merge pull request #2941 from bangerth/fix-signature-of-rand

Fix signature of our rand/srand implementations.

8 years agominor fixes in GMG unit tests 2938/head
Denis Davydov [Tue, 9 Aug 2016 18:41:40 +0000 (20:41 +0200)]
minor fixes in GMG unit tests

8 years agoMerge pull request #2769 from danshapero/tria-move
Wolfgang Bangerth [Tue, 9 Aug 2016 18:03:13 +0000 (13:03 -0500)]
Merge pull request #2769 from danshapero/tria-move

Move constructor for Triangulation

8 years agoAdded move constructor to Triangulation 2769/head
danshapero [Tue, 9 Aug 2016 18:00:14 +0000 (11:00 -0700)]
Added move constructor to Triangulation

8 years agoFix signature of our rand/srand implementations. 2941/head
Wolfgang Bangerth [Tue, 9 Aug 2016 17:44:27 +0000 (12:44 -0500)]
Fix signature of our rand/srand implementations.

Since these are functions in our own namespace -- that happen to have the
same names as ones in the std:: namespace, but really independent -- there
is no reason not to use our own conventions. Specifically:
- make input arguments 'const'
- remove the deprecated 'throw()' specification.

8 years agominor fixes in doxygen of MGCoarseGridApplySmoother
Denis Davydov [Tue, 9 Aug 2016 17:39:40 +0000 (19:39 +0200)]
minor fixes in doxygen of MGCoarseGridApplySmoother

8 years agoMerge pull request #2939 from drwells/fix-compilation-without-trilinos
Wolfgang Bangerth [Tue, 9 Aug 2016 17:12:21 +0000 (12:12 -0500)]
Merge pull request #2939 from drwells/fix-compilation-without-trilinos

Fix compilation without Trilinos.

8 years agoMerge pull request #2909 from tjhei/integrator_divergence
Timo Heister [Tue, 9 Aug 2016 16:14:26 +0000 (12:14 -0400)]
Merge pull request #2909 from tjhei/integrator_divergence

Extend LocalIntegrators::divergence and LocalIntegrators::GradDiv

8 years agoFix compilation without Trilinos. 2939/head
David Wells [Tue, 9 Aug 2016 16:12:08 +0000 (12:12 -0400)]
Fix compilation without Trilinos.

8 years agoan entry in changes.h
Denis Davydov [Tue, 9 Aug 2016 15:36:52 +0000 (17:36 +0200)]
an entry in changes.h

8 years agoGMG: add MGCoarseGridPreconditioner to apply a few steps of smoother at the coarse...
Denis Davydov [Tue, 9 Aug 2016 14:08:43 +0000 (16:08 +0200)]
GMG: add MGCoarseGridPreconditioner to apply a few steps of smoother at the coarse level

8 years agoMerge pull request #2933 from loylick/bugfix
Denis Davydov [Tue, 9 Aug 2016 15:31:22 +0000 (17:31 +0200)]
Merge pull request #2933 from loylick/bugfix

Fixed linker error under VS2013, moved definition of format_version v…

8 years agoAdded const modifier to format_version variable. 2933/head
loylick [Tue, 9 Aug 2016 15:18:45 +0000 (18:18 +0300)]
Added const modifier to format_version variable.

8 years agochangelog 2909/head
Timo Heister [Tue, 2 Aug 2016 19:46:15 +0000 (21:46 +0200)]
changelog

8 years agodeprecate functions, simplify code, cleanup
Timo Heister [Tue, 2 Aug 2016 19:32:14 +0000 (21:32 +0200)]
deprecate functions, simplify code, cleanup

- cleanup
- update tests
- deprecate some functions
- simplify code

8 years agograd-div residuals added and tested for consistency
Guido Kanschat [Tue, 2 Aug 2016 18:31:24 +0000 (20:31 +0200)]
grad-div residuals added and tested for consistency
grad-div removed from file divergence.h

8 years agoadd divergence integrators
Timo Heister [Tue, 2 Aug 2016 15:30:47 +0000 (17:30 +0200)]
add divergence integrators

8 years agoGMG: make it possible to use as a LinearOperator
Denis Davydov [Tue, 9 Aug 2016 08:48:48 +0000 (10:48 +0200)]
GMG: make it possible to use as a LinearOperator

8 years agoMerge pull request #2922 from class4kayaker/deprecate_MGL_clear
Wolfgang Bangerth [Tue, 9 Aug 2016 04:08:48 +0000 (23:08 -0500)]
Merge pull request #2922 from class4kayaker/deprecate_MGL_clear

Rename and deprecate MGLevelObject::clear()

8 years agoMerge pull request #2908 from tjhei/parallel_block_relaxation
Wolfgang Bangerth [Mon, 8 Aug 2016 23:27:46 +0000 (18:27 -0500)]
Merge pull request #2908 from tjhei/parallel_block_relaxation

Implement parallel GMG block relaxation

8 years agoimplement parallel RelaxationBlock 2908/head
Timo Heister [Tue, 2 Aug 2016 19:04:01 +0000 (21:04 +0200)]
implement parallel RelaxationBlock

- use a ghosted vector in RelaxationBlock
- introduce VectorType in base class RelaxationBlock
- update test for parallel RelaxationBlock
- add documentation

8 years agoparallel RelaxationBlock
Guido Kanschat [Tue, 2 Aug 2016 12:55:01 +0000 (14:55 +0200)]
parallel RelaxationBlock

- template RelaxationBlock::step on vector type
- instantiate for Trilinos
- add test

8 years agoMerge pull request #2930 from drwells/update-default-constructor-explanation
Wolfgang Bangerth [Mon, 8 Aug 2016 14:10:32 +0000 (09:10 -0500)]
Merge pull request #2930 from drwells/update-default-constructor-explanation

Redo the explanation of a default constructor.

8 years agoFixed linker error under VS2013, moved definition of format_version varible from...
loylick [Mon, 8 Aug 2016 01:01:16 +0000 (04:01 +0300)]
Fixed linker error under VS2013, moved definition of format_version varible from a header to cc file.

8 years agoMerge pull request #2932 from davydden/fix/parpack_warning
Denis Davydov [Sun, 7 Aug 2016 22:52:42 +0000 (00:52 +0200)]
Merge pull request #2932 from davydden/fix/parpack_warning

parpack: fix compiler warning

8 years agoparpack: fix compiler warning 2932/head
Denis Davydov [Sun, 7 Aug 2016 21:17:03 +0000 (23:17 +0200)]
parpack: fix compiler warning

8 years agoMerge pull request #2931 from masterleinad/cleanup_step56
Timo Heister [Sun, 7 Aug 2016 19:27:08 +0000 (15:27 -0400)]
Merge pull request #2931 from masterleinad/cleanup_step56

Remove ununsed class BoundaryValuesForVelocity in step-56

8 years agoRemove ununsed class BoundaryValuesForVelocity 2931/head
Daniel Arndt [Sun, 7 Aug 2016 18:38:03 +0000 (20:38 +0200)]
Remove ununsed class BoundaryValuesForVelocity

8 years agoMerge pull request #2924 from class4kayaker/fix_deprec_examples
Daniel Arndt [Sun, 7 Aug 2016 17:41:51 +0000 (19:41 +0200)]
Merge pull request #2924 from class4kayaker/fix_deprec_examples

Replace deprecated MGConstrainedDoFs::initialize in examples

8 years agoRedo the explanation of a default constructor. 2930/head
David Wells [Sun, 7 Aug 2016 13:36:11 +0000 (09:36 -0400)]
Redo the explanation of a default constructor.

clang 3.8 requires this default constructor be present in 98, 11, or 14
modes, which does techically follow the standard (section 8.5).

8 years agoMerge pull request #2925 from drwells/fix-tests-with-bind
Wolfgang Bangerth [Sat, 6 Aug 2016 23:16:08 +0000 (18:16 -0500)]
Merge pull request #2925 from drwells/fix-tests-with-bind

Fix some small test issues with std_cxx11::bind.

8 years agoMerge pull request #2926 from drwells/fix-sphericalmanifold-test
Wolfgang Bangerth [Sat, 6 Aug 2016 23:15:34 +0000 (18:15 -0500)]
Merge pull request #2926 from drwells/fix-sphericalmanifold-test

Fix a SphericalManifold test

8 years agoAdjust documentation for MGConstrainedDoFs::initialize() deprecation 2924/head
Jonathan Robey [Sat, 6 Aug 2016 22:39:42 +0000 (15:39 -0700)]
Adjust documentation for MGConstrainedDoFs::initialize() deprecation

8 years agoReplace deprecated MGConstrainedDoFs::initialize in examples
Jonathan Robey [Sat, 6 Aug 2016 06:49:09 +0000 (23:49 -0700)]
Replace deprecated MGConstrainedDoFs::initialize in examples

8 years agoMerge pull request #2928 from tjhei/indent_inst_files
Matthias Maier [Sat, 6 Aug 2016 21:25:16 +0000 (16:25 -0500)]
Merge pull request #2928 from tjhei/indent_inst_files

Indent .inst.in files using astyle

8 years agoindent all files 2928/head
Timo Heister [Sat, 6 Aug 2016 18:52:12 +0000 (14:52 -0400)]
indent all files

8 years agorun astyle .inst.in files
Timo Heister [Sat, 6 Aug 2016 18:43:05 +0000 (14:43 -0400)]
run astyle .inst.in files

8 years agoMerge pull request #2927 from drwells/split-tests/bits-04
Timo Heister [Sat, 6 Aug 2016 18:57:36 +0000 (14:57 -0400)]
Merge pull request #2927 from drwells/split-tests/bits-04

Move all DataOut tests into numerics.

8 years agoMove all DataOut tests into numerics. 2927/head
David Wells [Sat, 6 Aug 2016 17:55:45 +0000 (13:55 -0400)]
Move all DataOut tests into numerics.

Some of these tests were already there, but most of them were in
tests/bits.

8 years agoFix merge conflicts in SphericalManifold tests. 2926/head
David Wells [Sat, 6 Aug 2016 15:41:24 +0000 (11:41 -0400)]
Fix merge conflicts in SphericalManifold tests.

8 years agoEnable compilation of a test in C++03 mode.
David Wells [Sat, 6 Aug 2016 16:08:32 +0000 (12:08 -0400)]
Enable compilation of a test in C++03 mode.

8 years agoFix some small test issues with std_cxx11::bind. 2925/head
David Wells [Sat, 6 Aug 2016 15:13:40 +0000 (11:13 -0400)]
Fix some small test issues with std_cxx11::bind.

8 years agoRemove calls to deprecated MGLevelObject.clear() 2922/head
Jonathan Robey [Sat, 6 Aug 2016 05:24:45 +0000 (22:24 -0700)]
Remove calls to deprecated MGLevelObject.clear()

8 years agoRename and deprecate MGLevelObject::clear()
Jonathan Robey [Fri, 5 Aug 2016 22:59:34 +0000 (15:59 -0700)]
Rename and deprecate MGLevelObject::clear()

8 years agoMerge pull request #2921 from tamiko/cmake-fix-link-interface
Denis Davydov [Fri, 5 Aug 2016 17:34:32 +0000 (19:34 +0200)]
Merge pull request #2921 from tamiko/cmake-fix-link-interface

CMake: Bugfix: Clean up Boost-Python setup

8 years agoMerge pull request #2919 from tjhei/fix_make_cell_patches
Wolfgang Bangerth [Fri, 5 Aug 2016 17:06:37 +0000 (12:06 -0500)]
Merge pull request #2919 from tjhei/fix_make_cell_patches

fix make_cell_patches from #2907

8 years agofix make_cell_patches 2919/head
Timo Heister [Thu, 4 Aug 2016 20:01:16 +0000 (22:01 +0200)]
fix make_cell_patches

- fix instantiation to match declaration
- remove spacedim default value
- instantiate also for codim

8 years agoCMake: Print informative error messages in case of configuration failure 2921/head
Matthias Maier [Fri, 5 Aug 2016 16:14:51 +0000 (11:14 -0500)]
CMake: Print informative error messages in case of configuration failure

8 years agoCMake: Change order of libraries
Matthias Maier [Fri, 5 Aug 2016 15:59:20 +0000 (10:59 -0500)]
CMake: Change order of libraries

8 years agoCMake: Use FindBOOST.cmake to find python libraries in contrib/python_bindings
Matthias Maier [Fri, 5 Aug 2016 15:44:00 +0000 (10:44 -0500)]
CMake: Use FindBOOST.cmake to find python libraries in contrib/python_bindings

8 years agoCMake: Bugfix: Do not set up python component for boost
Matthias Maier [Fri, 5 Aug 2016 15:19:50 +0000 (10:19 -0500)]
CMake: Bugfix: Do not set up python component for boost

8 years agoCMake: Bugfix: Also expand PYTHON_BINDINGS to DEAL_II_COMPONENT_*
Matthias Maier [Fri, 5 Aug 2016 15:18:59 +0000 (10:18 -0500)]
CMake: Bugfix: Also expand PYTHON_BINDINGS to DEAL_II_COMPONENT_*

8 years agoMerge pull request #2918 from bangerth/fix-typo
Bruno Turcksin [Thu, 4 Aug 2016 17:31:18 +0000 (13:31 -0400)]
Merge pull request #2918 from bangerth/fix-typo

Fix a typo.

8 years agoFix a typo. 2918/head
Wolfgang Bangerth [Thu, 4 Aug 2016 17:25:43 +0000 (11:25 -0600)]
Fix a typo.

8 years agoMerge pull request #2917 from luca-heltai/fix-tests-manifold
Wolfgang Bangerth [Thu, 4 Aug 2016 17:25:11 +0000 (12:25 -0500)]
Merge pull request #2917 from luca-heltai/fix-tests-manifold

Fix tests manifold

8 years agoReverted to working versions of Mauro. 2917/head
Luca Heltai [Thu, 4 Aug 2016 16:30:27 +0000 (16:30 +0000)]
Reverted to working versions of Mauro.

8 years agoAdded get_new_point with two points and a weight.
Luca Heltai [Tue, 12 Jul 2016 10:39:30 +0000 (12:39 +0200)]
Added get_new_point with two points and a weight.

8 years agoMerge pull request #2916 from tamiko/master
Denis Davydov [Thu, 4 Aug 2016 13:03:25 +0000 (15:03 +0200)]
Merge pull request #2916 from tamiko/master

CMake: Bugfix: Do not annotate the python module with VERSION/SOVERSION

8 years agoCMake: Bugfix: Do not annotate the python module with VERSION/SOVERSION 2916/head
Matthias Maier [Thu, 4 Aug 2016 12:59:21 +0000 (07:59 -0500)]
CMake: Bugfix: Do not annotate the python module with VERSION/SOVERSION

This fixes a regression on Mac where Python modules are a dynamically
loaded module (".so") instead of a shared library (".dylib").

Closes #2915

8 years agoMerge pull request #2810 from luca-heltai/spherical-manifold-only
Luca Heltai [Thu, 4 Aug 2016 09:15:01 +0000 (11:15 +0200)]
Merge pull request #2810 from luca-heltai/spherical-manifold-only

SphericalManifold -> PolarManifold

8 years agoAdded entry to changes.h 2810/head
Luca Heltai [Thu, 4 Aug 2016 08:45:54 +0000 (10:45 +0200)]
Added entry to changes.h

8 years agoAddressing last comments by WB.
Luca Heltai [Thu, 4 Aug 2016 08:38:21 +0000 (10:38 +0200)]
Addressing last comments by WB.

8 years agoRefactored get_new_point with three arguments to get_intermediate_points.
Luca Heltai [Thu, 14 Jul 2016 17:00:38 +0000 (19:00 +0200)]
Refactored get_new_point with three arguments to get_intermediate_points.

8 years agoUpdated documentation for Manifolds.
Luca Heltai [Thu, 14 Jul 2016 16:06:22 +0000 (18:06 +0200)]
Updated documentation for Manifolds.

8 years agoRemove this commit
ESeNonFossiIo [Thu, 14 Jul 2016 16:13:28 +0000 (18:13 +0200)]
Remove this commit

8 years agoGrammar
ESeNonFossiIo [Thu, 14 Jul 2016 16:03:04 +0000 (18:03 +0200)]
Grammar

8 years agoAssert for get_tantgent_vector of SphericalManifold
ESeNonFossiIo [Thu, 14 Jul 2016 15:50:52 +0000 (17:50 +0200)]
Assert for get_tantgent_vector of SphericalManifold

8 years agoFixed indentation.
Luca Heltai [Tue, 12 Jul 2016 11:38:09 +0000 (13:38 +0200)]
Fixed indentation.

8 years agoFixed bug in mapping_manifold
Luca Heltai [Tue, 12 Jul 2016 11:29:00 +0000 (13:29 +0200)]
Fixed bug in mapping_manifold

8 years agoFixed comments in tests.
Luca Heltai [Tue, 12 Jul 2016 11:27:39 +0000 (13:27 +0200)]
Fixed comments in tests.

8 years agoSphericalManifold to PolarManifold.
Luca Heltai [Tue, 12 Jul 2016 11:26:21 +0000 (13:26 +0200)]
SphericalManifold to PolarManifold.

Moved the old version of SphericalManifold to PolarManifold, and
implemented a new SphericalManifold based on geodesics.

8 years agoAdded get_new_point with two points and a weight.
Luca Heltai [Tue, 12 Jul 2016 10:39:30 +0000 (12:39 +0200)]
Added get_new_point with two points and a weight.

8 years agoMerge pull request #2913 from Rombur/typo
Denis Davydov [Wed, 3 Aug 2016 21:28:24 +0000 (23:28 +0200)]
Merge pull request #2913 from Rombur/typo

Fix a typo in the documentation.

8 years agoFix a typo in the documentation. 2913/head
Bruno Turcksin [Wed, 3 Aug 2016 21:26:28 +0000 (17:26 -0400)]
Fix a typo in the documentation.

8 years agoMerge pull request #2912 from Rombur/python_change
Wolfgang Bangerth [Wed, 3 Aug 2016 21:08:08 +0000 (16:08 -0500)]
Merge pull request #2912 from Rombur/python_change

Add an entry in changes.h for the new Python bindings

8 years agoAdd an entry in changes.h for the new Python bindings 2912/head
Bruno Turcksin [Wed, 3 Aug 2016 21:05:07 +0000 (17:05 -0400)]
Add an entry in changes.h for the new Python bindings

8 years agoMerge pull request #2834 from Rombur/python
Bruno Turcksin [Wed, 3 Aug 2016 20:36:24 +0000 (16:36 -0400)]
Merge pull request #2834 from Rombur/python

Python

8 years agoRename the python modules. 2834/head
Bruno Turcksin [Mon, 25 Jul 2016 22:15:43 +0000 (18:15 -0400)]
Rename the python modules.

8 years agoRename python libraries
Matthias Maier [Mon, 25 Jul 2016 14:04:24 +0000 (09:04 -0500)]
Rename python libraries

8 years agoCMake: build a debug and release version of the python wrappers, set up installation
Matthias Maier [Fri, 22 Jul 2016 20:32:35 +0000 (15:32 -0500)]
CMake: build a debug and release version of the python wrappers, set up installation

8 years agoCMake: Add a component DEAL_II_COMPONENT_PYTHON_BINDINGS
Matthias Maier [Fri, 22 Jul 2016 19:13:29 +0000 (14:13 -0500)]
CMake: Add a component DEAL_II_COMPONENT_PYTHON_BINDINGS

8 years agoUse DEAL_II_WITH_CXX11 to guard c++11 code.
Bruno Turcksin [Fri, 22 Jul 2016 18:06:30 +0000 (14:06 -0400)]
Use DEAL_II_WITH_CXX11 to guard c++11 code.

8 years agoMove python wrapper to contrib/python-bindings.
Bruno Turcksin [Fri, 22 Jul 2016 17:30:52 +0000 (13:30 -0400)]
Move python wrapper to contrib/python-bindings.

8 years agoChange namespace for the python wrapper.
Bruno Turcksin [Fri, 22 Jul 2016 15:00:43 +0000 (11:00 -0400)]
Change namespace for the python wrapper.

8 years agoClean python documentation.
Bruno Turcksin [Fri, 15 Jul 2016 13:10:19 +0000 (09:10 -0400)]
Clean python documentation.

8 years agoEnable to turn python wrapper off.
Bruno Turcksin [Sun, 10 Jul 2016 03:58:12 +0000 (23:58 -0400)]
Enable to turn python wrapper off.

8 years agoReplace __iter__ by active_cells.
Bruno Turcksin [Tue, 28 Jun 2016 21:19:06 +0000 (17:19 -0400)]
Replace __iter__ by active_cells.

8 years agoAdd const to variables and functions.
Bruno Turcksin [Tue, 28 Jun 2016 13:12:38 +0000 (09:12 -0400)]
Add const to variables and functions.

8 years agoOutput triangulation and add adaptive mesh refinement.
Bruno Turcksin [Mon, 27 Jun 2016 15:16:12 +0000 (11:16 -0400)]
Output triangulation and add adaptive mesh refinement.

8 years agoAdd CellAccessor wrapper.
Bruno Turcksin [Fri, 24 Jun 2016 20:47:20 +0000 (16:47 -0400)]
Add CellAccessor wrapper.

8 years agoAllow Triangulation to set spacedim different than dim.
Bruno Turcksin [Fri, 17 Jun 2016 14:31:39 +0000 (10:31 -0400)]
Allow Triangulation to set spacedim different than dim.

8 years agoAdd tests and fix a few bugs.
Bruno Turcksin [Thu, 16 Jun 2016 13:57:59 +0000 (09:57 -0400)]
Add tests and fix a few bugs.

8 years agoUse helper functions to decrease code duplication.
Bruno Turcksin [Mon, 13 Jun 2016 13:29:21 +0000 (09:29 -0400)]
Use helper functions to decrease code duplication.

8 years agoMake a few functions const and remove reset_triangulation.
Bruno Turcksin [Mon, 13 Jun 2016 12:47:27 +0000 (08:47 -0400)]
Make a few functions const and remove reset_triangulation.

8 years agoAdd 3D for Triangulation and Point interface.
Bruno Turcksin [Fri, 10 Jun 2016 12:02:10 +0000 (08:02 -0400)]
Add 3D for Triangulation and Point interface.

8 years agoMove PointWrapper to its own files.
Bruno Turcksin [Fri, 3 Jun 2016 15:16:50 +0000 (11:16 -0400)]
Move PointWrapper to its own files.

8 years agoImprove Point interface.
Bruno Turcksin [Thu, 2 Jun 2016 18:53:47 +0000 (14:53 -0400)]
Improve Point interface.


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