]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
6 years agoMerge pull request #5854 from masterleinad/fix-coverity
Wolfgang Bangerth [Sun, 4 Feb 2018 22:21:21 +0000 (15:21 -0700)]
Merge pull request #5854 from masterleinad/fix-coverity

Fix issues discovered by Coverity

6 years agoFix issues discovered by Coverity 5854/head
Daniel Arndt [Sat, 3 Feb 2018 21:08:13 +0000 (22:08 +0100)]
Fix issues discovered by Coverity

6 years agoMerge pull request #5851 from masterleinad/clang_unused_parameters
Denis Davydov [Sun, 4 Feb 2018 18:19:54 +0000 (19:19 +0100)]
Merge pull request #5851 from masterleinad/clang_unused_parameters

Allow detecting unused parameters using clang

6 years agoMerge pull request #5856 from masterleinad/fix_bundled_warnings
David Wells [Sun, 4 Feb 2018 18:12:38 +0000 (13:12 -0500)]
Merge pull request #5856 from masterleinad/fix_bundled_warnings

Fix bundled warnings

6 years agoMerge pull request #5847 from tjhei/doxygen_sundials
Denis Davydov [Sun, 4 Feb 2018 15:45:02 +0000 (16:45 +0100)]
Merge pull request #5847 from tjhei/doxygen_sundials

document sundials namespace

6 years agoFix warnings for bundled muParser 5856/head
Daniel Arndt [Sun, 4 Feb 2018 13:31:19 +0000 (14:31 +0100)]
Fix warnings for bundled muParser

6 years agoFix warnings for bundled boost
Daniel Arndt [Sun, 4 Feb 2018 13:30:20 +0000 (14:30 +0100)]
Fix warnings for bundled boost

6 years agoMerge pull request #5855 from masterleinad/replace_last_boundary_occurence
Denis Davydov [Sun, 4 Feb 2018 08:58:03 +0000 (09:58 +0100)]
Merge pull request #5855 from masterleinad/replace_last_boundary_occurence

Replace last Boundary occurences in the test folder

6 years agoMerge pull request #5805 from dangars/gmsh-test
Denis Davydov [Sun, 4 Feb 2018 08:57:15 +0000 (09:57 +0100)]
Merge pull request #5805 from dangars/gmsh-test

Add Transfinite Line

6 years agoMerge pull request #5853 from drwells/unused-scalapack
Jean-Paul Pelteret [Sun, 4 Feb 2018 08:26:23 +0000 (09:26 +0100)]
Merge pull request #5853 from drwells/unused-scalapack

deal with unused variable warnings in scalapack bindings and bundled code.

6 years agoRemove tria_boundary.h and replace Boundary<2>::FaceVertexNormals 5855/head
Daniel Arndt [Sat, 3 Feb 2018 18:50:28 +0000 (19:50 +0100)]
Remove tria_boundary.h and replace Boundary<2>::FaceVertexNormals

6 years agoMerge pull request #5852 from drwells/remove-cylindermanifold-specialization
David Wells [Sat, 3 Feb 2018 22:48:01 +0000 (17:48 -0500)]
Merge pull request #5852 from drwells/remove-cylindermanifold-specialization

Remove the hidden CylindricalManifold<dim, 3> code.

6 years agodocument sundials namespace 5847/head
Timo Heister [Sat, 3 Feb 2018 03:35:56 +0000 (22:35 -0500)]
document sundials namespace

otherwise it doesn't appear in doxygen.

6 years agoSuppress warnings in bundled packages. 5853/head
David Wells [Sat, 3 Feb 2018 20:28:37 +0000 (15:28 -0500)]
Suppress warnings in bundled packages.

6 years agocomment out unused variables in scalapack bindings.
David Wells [Sat, 3 Feb 2018 20:21:09 +0000 (15:21 -0500)]
comment out unused variables in scalapack bindings.

6 years agoReplace the last Boundary object in the tests
Daniel Arndt [Sat, 3 Feb 2018 18:19:45 +0000 (19:19 +0100)]
Replace the last Boundary object in the tests

6 years agoRemove the hidden CylindricalManifold<dim, 3> code. 5852/head
David Wells [Sat, 3 Feb 2018 18:13:45 +0000 (13:13 -0500)]
Remove the hidden CylindricalManifold<dim, 3> code.

It turns out that we have converted enough compile-time dimensionality checks to
run-time dimensionality checks that we can use just one implementation for
CylindricalManifold instead of two.

6 years agoMerge pull request #5846 from bangerth/step-dependencies
Daniel Arndt [Sat, 3 Feb 2018 17:19:16 +0000 (18:19 +0100)]
Merge pull request #5846 from bangerth/step-dependencies

List for each tutorial what others it depends on.

6 years agoAllow detecting unused parameters using clang 5851/head
Daniel Arndt [Sat, 3 Feb 2018 16:46:48 +0000 (17:46 +0100)]
Allow detecting unused parameters using clang

6 years agoMerge pull request #5845 from bangerth/doc-update
Daniel Arndt [Sat, 3 Feb 2018 16:18:30 +0000 (17:18 +0100)]
Merge pull request #5845 from bangerth/doc-update

Update documentation around hyper-balls and spherical manifolds.

6 years agoMerge pull request #5834 from masterleinad/fullmatrix_size_type
Wolfgang Bangerth [Sat, 3 Feb 2018 14:57:19 +0000 (07:57 -0700)]
Merge pull request #5834 from masterleinad/fullmatrix_size_type

FullMatrix size type

6 years agoMerge pull request #5850 from masterleinad/fix_scalapack_10
Wolfgang Bangerth [Sat, 3 Feb 2018 14:48:44 +0000 (07:48 -0700)]
Merge pull request #5850 from masterleinad/fix_scalapack_10

Fix scalapack_10

6 years agoFix scalapack_10 5850/head
Daniel Arndt [Sat, 3 Feb 2018 13:30:29 +0000 (14:30 +0100)]
Fix scalapack_10

6 years agoChangelog entry 5834/head
Daniel Arndt [Wed, 31 Jan 2018 23:57:11 +0000 (00:57 +0100)]
Changelog entry

6 years agoUpdate test output
Daniel Arndt [Sat, 3 Feb 2018 00:40:15 +0000 (01:40 +0100)]
Update test output

6 years agostatic_cast in full_matrix.templates.h
Daniel Arndt [Fri, 2 Feb 2018 12:34:07 +0000 (13:34 +0100)]
static_cast in full_matrix.templates.h

6 years agostatic_cast in lapack_full_matrix.h
Daniel Arndt [Fri, 2 Feb 2018 12:33:34 +0000 (13:33 +0100)]
static_cast in lapack_full_matrix.h

6 years agoReplace n_rows() by m(), n_cols() by n() in lapack_full_matrix.cc
Daniel Arndt [Fri, 2 Feb 2018 11:43:56 +0000 (12:43 +0100)]
Replace n_rows() by m(), n_cols() by n() in lapack_full_matrix.cc

6 years agoChange size_type for LAPACKFullMatrix
Daniel Arndt [Fri, 2 Feb 2018 10:14:40 +0000 (11:14 +0100)]
Change size_type for LAPACKFullMatrix

6 years agoChange size_type for FullMatrix
Daniel Arndt [Fri, 2 Feb 2018 10:15:04 +0000 (11:15 +0100)]
Change size_type for FullMatrix

6 years agoUse size_type in table.h for index access
Daniel Arndt [Fri, 2 Feb 2018 09:43:37 +0000 (10:43 +0100)]
Use size_type in table.h for index access

6 years agoUse std::size_t in table_indices.h for index access
Daniel Arndt [Fri, 2 Feb 2018 09:45:35 +0000 (10:45 +0100)]
Use std::size_t in table_indices.h for index access

6 years agoRemove const_cast in lapack_full_matrix.cc
Daniel Arndt [Fri, 2 Feb 2018 10:30:05 +0000 (11:30 +0100)]
Remove const_cast in lapack_full_matrix.cc

6 years agoUse the type of the largest value in AssertIndexRange
Daniel Arndt [Fri, 2 Feb 2018 09:06:08 +0000 (10:06 +0100)]
Use the type of the largest value in AssertIndexRange

6 years agoList for each tutorial what others it depends on. 5846/head
Wolfgang Bangerth [Fri, 2 Feb 2018 21:00:55 +0000 (14:00 -0700)]
List for each tutorial what others it depends on.

6 years agoUpdate documentation around hyper-balls and spherical manifolds. 5845/head
Wolfgang Bangerth [Fri, 2 Feb 2018 20:26:26 +0000 (13:26 -0700)]
Update documentation around hyper-balls and spherical manifolds.

In particular, link to the discussion in the results section of step-6.

6 years agoMerge pull request #5842 from jppelteret/add_dim_0_tensor_assignment_operator
Daniel Arndt [Fri, 2 Feb 2018 12:27:46 +0000 (13:27 +0100)]
Merge pull request #5842 from jppelteret/add_dim_0_tensor_assignment_operator

Add operator assigning a scalar to a Tensor<0>.

6 years agoMerge pull request #5843 from masterleinad/unused_dof_handler
David Wells [Fri, 2 Feb 2018 11:51:53 +0000 (06:51 -0500)]
Merge pull request #5843 from masterleinad/unused_dof_handler

Fix unused variables in dof_handler.cc

6 years agoFix unused variables in dof_handler.cc 5843/head
Daniel Arndt [Fri, 2 Feb 2018 09:36:50 +0000 (10:36 +0100)]
Fix unused variables in dof_handler.cc

6 years agoChange the default value of a parameter from 0 to nullptr. 5842/head
Jean-Paul Pelteret [Fri, 2 Feb 2018 06:15:25 +0000 (07:15 +0100)]
Change the default value of a parameter from 0 to nullptr.

6 years agoFacilitate casting between tensors of AD numbers to floats.
Jean-Paul Pelteret [Fri, 2 Feb 2018 06:14:16 +0000 (07:14 +0100)]
Facilitate casting between tensors of AD numbers to floats.

6 years agoAdd operator assigning a scalar to a Tensor<0>.
Jean-Paul Pelteret [Fri, 2 Feb 2018 05:51:04 +0000 (06:51 +0100)]
Add operator assigning a scalar to a Tensor<0>.

6 years agoMerge pull request #5781 from BenBrands/scalapack
Wolfgang Bangerth [Fri, 2 Feb 2018 03:04:59 +0000 (20:04 -0700)]
Merge pull request #5781 from BenBrands/scalapack

ScaLAPACKMatrix: add routines to save/load matrix to/from disc

6 years agoMerge pull request #5841 from jppelteret/fix_5840
Denis Davydov [Thu, 1 Feb 2018 20:10:52 +0000 (21:10 +0100)]
Merge pull request #5841 from jppelteret/fix_5840

Remove a typedef thats unused when compiling in release mode.

6 years agoAdd Transfinite Line 5805/head
Daniel Garcia-Sanchez [Thu, 25 Jan 2018 20:26:28 +0000 (21:26 +0100)]
Add Transfinite Line

6 years agoRemove a typedef thats unused when compiling in release mode. 5841/head
Jean-Paul Pelteret [Thu, 1 Feb 2018 18:03:14 +0000 (19:03 +0100)]
Remove a typedef thats unused when compiling in release mode.

Fixes 5840.

6 years agoMerge pull request #5827 from bangerth/sort-code-gallery
Denis Davydov [Thu, 1 Feb 2018 16:44:25 +0000 (17:44 +0100)]
Merge pull request #5827 from bangerth/sort-code-gallery

Sort entries to the code gallery by their name, not their directory name.

6 years agoMerge pull request #5837 from QiaoLei-88/fix_icc15_compile
Denis Davydov [Thu, 1 Feb 2018 16:21:19 +0000 (17:21 +0100)]
Merge pull request #5837 from QiaoLei-88/fix_icc15_compile

make icc 15 compiles on CentOS 7

6 years agoMerge pull request #5836 from bangerth/fix-wording
Denis Davydov [Thu, 1 Feb 2018 13:49:07 +0000 (14:49 +0100)]
Merge pull request #5836 from bangerth/fix-wording

Use less obscure wording.

6 years agoUse less obscure wording. 5836/head
Wolfgang Bangerth [Thu, 1 Feb 2018 03:38:09 +0000 (20:38 -0700)]
Use less obscure wording.

6 years agoMerge pull request #5838 from kronbichler/mf_dg_step1
David Wells [Thu, 1 Feb 2018 12:59:53 +0000 (07:59 -0500)]
Merge pull request #5838 from kronbichler/mf_dg_step1

Add macro for __restrict keyword.

6 years agoAdd macro for __restrict keyword. 5838/head
Martin Kronbichler [Thu, 1 Feb 2018 10:23:01 +0000 (11:23 +0100)]
Add macro for __restrict keyword.

6 years agoMerge pull request #5831 from masterleinad/fix_periodicity_01
Denis Davydov [Thu, 1 Feb 2018 05:37:59 +0000 (06:37 +0100)]
Merge pull request #5831 from masterleinad/fix_periodicity_01

Fix mpi/periodicity_01

6 years agoMerge pull request #5835 from Rombur/trilinos_documentation
Wolfgang Bangerth [Thu, 1 Feb 2018 03:16:16 +0000 (20:16 -0700)]
Merge pull request #5835 from Rombur/trilinos_documentation

Remove reference to a function that does not exist

6 years agosatisfy icc 15 about template arguments of std::map's 5837/head
Lei Qiao [Thu, 1 Feb 2018 01:49:55 +0000 (09:49 +0800)]
satisfy icc 15 about template arguments of std::map's

6 years agoRemove reference to a function that does not exist 5835/head
Bruno Turcksin [Thu, 1 Feb 2018 02:55:55 +0000 (21:55 -0500)]
Remove reference to a function that does not exist

6 years agoMerge pull request #5833 from masterleinad/fix_enriched_ice
David Wells [Thu, 1 Feb 2018 02:04:36 +0000 (21:04 -0500)]
Merge pull request #5833 from masterleinad/fix_enriched_ice

Fix ICC-16 ICE in fe_enriched.h

6 years agoWorkaround ICC compiler bug 5833/head
Daniel Arndt [Wed, 31 Jan 2018 18:37:29 +0000 (19:37 +0100)]
Workaround ICC compiler bug

6 years agoMerge pull request #5832 from masterleinad/fix_typo_finitelement
David Wells [Wed, 31 Jan 2018 15:55:29 +0000 (10:55 -0500)]
Merge pull request #5832 from masterleinad/fix_typo_finitelement

Fix typo FinitElement

6 years agoFix typo FinitElement 5832/head
Daniel Arndt [Wed, 31 Jan 2018 15:41:56 +0000 (16:41 +0100)]
Fix typo FinitElement

6 years agoMerge pull request #5826 from Rombur/cusparse_assert
Bruno Turcksin [Wed, 31 Jan 2018 13:23:54 +0000 (08:23 -0500)]
Merge pull request #5826 from Rombur/cusparse_assert

Cusparse assert

6 years agoMerge pull request #5714 from masterleinad/replace_hypersphere
Martin Kronbichler [Wed, 31 Jan 2018 10:25:11 +0000 (11:25 +0100)]
Merge pull request #5714 from masterleinad/replace_hypersphere

 Replace HyperShellBoundary by SphericalManifold in tests

6 years agoAdd changelog entry 5826/head
Bruno Turcksin [Mon, 29 Jan 2018 15:49:53 +0000 (10:49 -0500)]
Add changelog entry

6 years agoAdd AssertCusparse macro to check that a cuSPARSE routine was successful
Bruno Turcksin [Mon, 29 Jan 2018 15:44:59 +0000 (10:44 -0500)]
Add AssertCusparse macro to check that a cuSPARSE routine was successful

6 years agoImprove documentation 5831/head
Daniel Arndt [Tue, 30 Jan 2018 22:12:28 +0000 (23:12 +0100)]
Improve documentation

6 years agoClean up 5714/head
Daniel Arndt [Wed, 10 Jan 2018 09:13:59 +0000 (10:13 +0100)]
Clean up

6 years agoReplace HyperShellBoundary by SphericalManifold in tests
Daniel Arndt [Wed, 3 Jan 2018 12:04:55 +0000 (13:04 +0100)]
Replace HyperShellBoundary by SphericalManifold in tests

6 years agoFix else branch in SphericalManifold::normals_at_vertices
Daniel Arndt [Tue, 30 Jan 2018 21:43:10 +0000 (22:43 +0100)]
Fix else branch in SphericalManifold::normals_at_vertices

6 years agoFix mpi/periodicity_01
Daniel Arndt [Tue, 30 Jan 2018 15:23:12 +0000 (16:23 +0100)]
Fix mpi/periodicity_01

6 years agoMerge pull request #5830 from kronbichler/fix_mg_transfer_mf
Daniel Arndt [Tue, 30 Jan 2018 13:11:26 +0000 (14:11 +0100)]
Merge pull request #5830 from kronbichler/fix_mg_transfer_mf

Fix matrix-free transfer for multi-components FE and p>10

6 years agoAdd changelog. 5830/head
Martin Kronbichler [Tue, 30 Jan 2018 10:21:34 +0000 (11:21 +0100)]
Add changelog.

6 years agoAdd test.
Martin Kronbichler [Tue, 30 Jan 2018 10:19:01 +0000 (11:19 +0100)]
Add test.

6 years agoFix transfer for high polynomial degrees.
Martin Kronbichler [Tue, 30 Jan 2018 10:18:50 +0000 (11:18 +0100)]
Fix transfer for high polynomial degrees.

6 years agoMerge pull request #5819 from drwells/project-to-object-tol
Martin Kronbichler [Tue, 30 Jan 2018 08:13:42 +0000 (09:13 +0100)]
Merge pull request #5819 from drwells/project-to-object-tol

Improve tolerances for errors near zero.

6 years agoMerge pull request #5711 from masterleinad/simplify_normal_spherical
Martin Kronbichler [Tue, 30 Jan 2018 08:11:43 +0000 (09:11 +0100)]
Merge pull request #5711 from masterleinad/simplify_normal_spherical

Simplify implementation for normal_vector and get_normals_at_vertices in SphericalManifold

6 years agoSort entries to the code gallery by their name, not their directory name. 5827/head
Wolfgang Bangerth [Mon, 29 Jan 2018 22:13:20 +0000 (15:13 -0700)]
Sort entries to the code gallery by their name, not their directory name.

6 years agoseparated tests for copying sub-matrices 5781/head
Benjamin Brands [Mon, 29 Jan 2018 20:17:46 +0000 (21:17 +0100)]
separated tests for copying sub-matrices

6 years agoMerge pull request #5825 from Rombur/fix_cuda
Wolfgang Bangerth [Mon, 29 Jan 2018 17:48:55 +0000 (10:48 -0700)]
Merge pull request #5825 from Rombur/fix_cuda

Fix a bug in a CUDA vector constructor

6 years agoSimplify implementation for normal_vector and get_normals_at_vertices in SphericalMan... 5711/head
Daniel Arndt [Wed, 10 Jan 2018 00:05:34 +0000 (01:05 +0100)]
Simplify implementation for normal_vector and get_normals_at_vertices in SphericalManifold

6 years agocorrections_I
Benjamin Brands [Wed, 24 Jan 2018 08:14:49 +0000 (09:14 +0100)]
corrections_I

6 years agoimprove documentation and minor clean-ups
Benjamin Brands [Tue, 23 Jan 2018 09:37:01 +0000 (10:37 +0100)]
improve documentation and minor clean-ups

6 years agoadd routine copy_to to copy content of a submatrix of A to a submatrix of B
Benjamin Brands [Tue, 23 Jan 2018 09:18:49 +0000 (10:18 +0100)]
add routine copy_to to copy content of a submatrix of A to a submatrix of B

6 years agoadd tests for save/load of ScaLapackMatrix
Benjamin Brands [Tue, 23 Jan 2018 09:14:57 +0000 (10:14 +0100)]
add tests for save/load of ScaLapackMatrix

6 years agoadd routines to save/load ScaLAPACK matrices using HDF5
Benjamin Brands [Tue, 23 Jan 2018 09:11:27 +0000 (10:11 +0100)]
add routines to save/load ScaLAPACK matrices using HDF5

6 years agoadd hdf5_type_id to return HDF5 type
Benjamin Brands [Tue, 23 Jan 2018 08:47:26 +0000 (09:47 +0100)]
add hdf5_type_id to return HDF5 type

6 years agoMerge pull request #5823 from BenBrands/move_some_to_some
Denis Davydov [Mon, 29 Jan 2018 10:05:06 +0000 (11:05 +0100)]
Merge pull request #5823 from BenBrands/move_some_to_some

move implementation of Utilities::MPI::some_to_some()

6 years agoFix a bug in a CUDA vector constructor 5825/head
Bruno Turcksin [Mon, 29 Jan 2018 00:33:31 +0000 (19:33 -0500)]
Fix a bug in a CUDA vector constructor

The constructor did not set the values in the vector to zero

6 years agoMerge pull request #5824 from masterleinad/rm_sd_ids_p_08
David Wells [Sun, 28 Jan 2018 21:59:02 +0000 (16:59 -0500)]
Merge pull request #5824 from masterleinad/rm_sd_ids_p_08

Remove subdomain_ids_parallel_08

6 years agoMerge pull request #5779 from masterleinad/fix_periodic_dofs
Daniel Arndt [Sun, 28 Jan 2018 20:00:23 +0000 (21:00 +0100)]
Merge pull request #5779 from masterleinad/fix_periodic_dofs

Fix periodicity constraints for multiply constrained DoFs

6 years agoMerge pull request #5811 from bangerth/unpack-for-arrays
Timo Heister [Sun, 28 Jan 2018 18:41:56 +0000 (13:41 -0500)]
Merge pull request #5811 from bangerth/unpack-for-arrays

Add a variant of Utilities::unpack() for arrays.

6 years agoRemove subdomain_ids_parallel_08 5824/head
Daniel Arndt [Sun, 28 Jan 2018 18:21:47 +0000 (19:21 +0100)]
Remove subdomain_ids_parallel_08

6 years agomove implemetation of MPI::some_to_some 5823/head
benjamin [Sun, 28 Jan 2018 10:38:09 +0000 (11:38 +0100)]
move implemetation of MPI::some_to_some

6 years agoMerge pull request #5822 from bangerth/copyright
Denis Davydov [Sun, 28 Jan 2018 07:22:15 +0000 (08:22 +0100)]
Merge pull request #5822 from bangerth/copyright

Update copyright years.

6 years agoMerge pull request #5820 from BenBrands/move_all_gather
Denis Davydov [Sun, 28 Jan 2018 07:21:25 +0000 (08:21 +0100)]
Merge pull request #5820 from BenBrands/move_all_gather

Move implementation of MPI::all_gather()

6 years agoUpdate copyright years. 5822/head
Wolfgang Bangerth [Sun, 28 Jan 2018 03:01:01 +0000 (20:01 -0700)]
Update copyright years.

6 years agoMerge pull request #5817 from drwells/cppcheck-4
Wolfgang Bangerth [Sun, 28 Jan 2018 02:17:16 +0000 (19:17 -0700)]
Merge pull request #5817 from drwells/cppcheck-4

Fix some things cppcheck found.

6 years agoMerge pull request #5821 from masterleinad/fix_utilities_pack_unpack_03
Wolfgang Bangerth [Sun, 28 Jan 2018 02:14:19 +0000 (19:14 -0700)]
Merge pull request #5821 from masterleinad/fix_utilities_pack_unpack_03

Fix utilities_pack_unpack_03

6 years agoMerge pull request #5809 from bangerth/pointers
Daniel Arndt [Sat, 27 Jan 2018 23:51:39 +0000 (00:51 +0100)]
Merge pull request #5809 from bangerth/pointers

Specialize ArrayViewHelper::is_contiguous() for pointers.

6 years agoFix utilities_pack_unpack_03 5821/head
Daniel Arndt [Sat, 27 Jan 2018 23:27:20 +0000 (00:27 +0100)]
Fix utilities_pack_unpack_03

6 years agoUse nullptr for the null pointer. 5817/head
David Wells [Sat, 27 Jan 2018 18:19:53 +0000 (13:19 -0500)]
Use nullptr for the null pointer.


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