Fix bug in update_ghost_values of matrix free with partition_partition strategy for hybrid parallelism.

git-svn-id: https://svn.dealii.org/trunk@31370 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Make output of run_test.cmake compatible with makereport.py

git-svn-id: https://svn.dealii.org/trunk@31369 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Avoid duplicate entries in categories candidate list

git-svn-id: https://svn.dealii.org/trunk@31368 0785d39b-7218-0410-832d-ea1e28bc413d

Testsuite: Bugfixes

git-svn-id: https://svn.dealii.org/trunk@31367 0785d39b-7218-0410-832d-ea1e28bc413d

Testsuite: Add a-framework/configure

git-svn-id: https://svn.dealii.org/trunk@31366 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: *blush*

git-svn-id: https://svn.dealii.org/trunk@31365 0785d39b-7218-0410-832d-ea1e28bc413d

Attach SLEPc solver patch to trunk.

git-svn-id: https://svn.dealii.org/trunk@31362 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Pass down TEST_OVERRIDE_LOCATION in run_testsuite.cmake

git-svn-id: https://svn.dealii.org/trunk@31361 0785d39b-7218-0410-832d-ea1e28bc413d

Make the regression tester happy

git-svn-id: https://svn.dealii.org/trunk@31360 0785d39b-7218-0410-832d-ea1e28bc413d

Always query test output for test stage in makereport.py, only provide one build test in a-framework

git-svn-id: https://svn.dealii.org/trunk@31359 0785d39b-7218-0410-832d-ea1e28bc413d

CMake: Bugfix: MPI_INCLUDE_DIR might contain multiple include paths.

git-svn-id: https://svn.dealii.org/trunk@31358 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Remove stray decimal point

git-svn-id: https://svn.dealii.org/trunk@31357 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Correct a C&P error in solver_relaxation.h

git-svn-id: https://svn.dealii.org/trunk@31356 0785d39b-7218-0410-832d-ea1e28bc413d

Testsuite: Typo

git-svn-id: https://svn.dealii.org/trunk@31354 0785d39b-7218-0410-832d-ea1e28bc413d

Testsuite: Bugfix: Invert search order for failing stages in run_test.cmake

git-svn-id: https://svn.dealii.org/trunk@31353 0785d39b-7218-0410-832d-ea1e28bc413d

treat tests with timeout correctly

git-svn-id: https://svn.dealii.org/trunk@31352 0785d39b-7218-0410-832d-ea1e28bc413d

makereport.py: output errors to stderr instead

git-svn-id: https://svn.dealii.org/trunk@31351 0785d39b-7218-0410-832d-ea1e28bc413d

Add a small note to changes.h

git-svn-id: https://svn.dealii.org/trunk@31350 0785d39b-7218-0410-832d-ea1e28bc413d

Merge branch_port_the_testsuite to mainline

This commit introduces the new testsuite and finishes the port to CMake.

TODO: Write a news item in changes.h

git-svn-id: https://svn.dealii.org/trunk@31349 0785d39b-7218-0410-832d-ea1e28bc413d

Quick fix.

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31348 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31347 0785d39b-7218-0410-832d-ea1e28bc413d

Implement TEST_OVERRIDE_LOCATION

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31346 0785d39b-7218-0410-832d-ea1e28bc413d

Add documentation

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31345 0785d39b-7218-0410-832d-ea1e28bc413d

Add expect=<STAGE> facility

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31344 0785d39b-7218-0410-832d-ea1e28bc413d

Add a-framework

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31343 0785d39b-7218-0410-832d-ea1e28bc413d

Derive SolverControl::NoConvergence from dealii::ExceptionBase

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31341 0785d39b-7218-0410-832d-ea1e28bc413d

Change the tolerance for trilinos/deal_solver_02 a bit

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31339 0785d39b-7218-0410-832d-ea1e28bc413d

Make the output of petsc_solver_(02|11) more robust

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31338 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31334 0785d39b-7218-0410-832d-ea1e28bc413d

Cleanup

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31333 0785d39b-7218-0410-832d-ea1e28bc413d

Remove a lot of stale folders git-svn forgot to remove...

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31331 0785d39b-7218-0410-832d-ea1e28bc413d

Port mesh_converter tests part II

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31329 0785d39b-7218-0410-832d-ea1e28bc413d

Correct a trivial typo.

git-svn-id: https://svn.dealii.org/trunk@31328 0785d39b-7218-0410-832d-ea1e28bc413d

Add mesh_converter tests Part I

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31327 0785d39b-7218-0410-832d-ea1e28bc413d

Remove TODO

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31326 0785d39b-7218-0410-832d-ea1e28bc413d

Unify grid file location

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31325 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31324 0785d39b-7218-0410-832d-ea1e28bc413d

Remove a chunk of dead code.

git-svn-id: https://svn.dealii.org/trunk@31323 0785d39b-7218-0410-832d-ea1e28bc413d

Port new tests

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31314 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31313 0785d39b-7218-0410-832d-ea1e28bc413d

Disable extra inclusion glob for now

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31312 0785d39b-7218-0410-832d-ea1e28bc413d

make python scripts more robust

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31311 0785d39b-7218-0410-832d-ea1e28bc413d

Bug fix

git-svn-id: https://svn.dealii.org/trunk@31310 0785d39b-7218-0410-832d-ea1e28bc413d

Update exclusion glob

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31307 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Pick up coverage results also from subprojects

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31306 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust output: We do not output ghosts of a vector when they are not up to date.

git-svn-id: https://svn.dealii.org/trunk@31303 0785d39b-7218-0410-832d-ea1e28bc413d

Add safety check that vector really is ghosted in fe_evaluation.

git-svn-id: https://svn.dealii.org/trunk@31302 0785d39b-7218-0410-832d-ea1e28bc413d

Improve handling of ghost elements in parallel vector: Distinguish a state with read access to ghost elements and one with write access (assembly mode).

git-svn-id: https://svn.dealii.org/trunk@31301 0785d39b-7218-0410-832d-ea1e28bc413d

Enable -fno-elide-constructors for coverage test

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31298 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31294 0785d39b-7218-0410-832d-ea1e28bc413d

Use std_cxx1x::bind instead of std::bind which is not available in non C++11 mode

git-svn-id: https://svn.dealii.org/trunk@31293 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Do not list pure header files in CTEST_EXTRA_COVERAGE_GLOB

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31292 0785d39b-7218-0410-832d-ea1e28bc413d

Delete unused variables in matrix_tools.

git-svn-id: https://svn.dealii.org/trunk@31291 0785d39b-7218-0410-832d-ea1e28bc413d

Provide a run_coverage.cmake script

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31290 0785d39b-7218-0410-832d-ea1e28bc413d

Cleanup

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31289 0785d39b-7218-0410-832d-ea1e28bc413d

Fix comments

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31288 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31287 0785d39b-7218-0410-832d-ea1e28bc413d

Use WorkStream in Step-14. Need to update the documentation and to use TBB instead of new_thread.

git-svn-id: https://svn.dealii.org/trunk@31286 0785d39b-7218-0410-832d-ea1e28bc413d

Use WorkStream in Step-13. Need to update the documentation and to use TBB instead of new_thread.

git-svn-id: https://svn.dealii.org/trunk@31285 0785d39b-7218-0410-832d-ea1e28bc413d

Cleanup and provide some more output

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31283 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Correct pickup regex for coverage files

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31280 0785d39b-7218-0410-832d-ea1e28bc413d

Add Coverage support

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31279 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: It is safe to export TBB_IMPLEMENT_CXX1X and the user should do this, too

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31275 0785d39b-7218-0410-832d-ea1e28bc413d

Workaround for a constexpr bug in gcc-4.8* on Windows and Mac

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31274 0785d39b-7218-0410-832d-ea1e28bc413d

Try to fix an issue with MinGW64 4.8.1

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31273 0785d39b-7218-0410-832d-ea1e28bc413d

GridTools::partition_triangulation no longer uses user_index which fixes step-18 in debug mode

git-svn-id: https://svn.dealii.org/trunk@31272 0785d39b-7218-0410-832d-ea1e28bc413d

take over 31267,31269,31270 from the branch

git-svn-id: https://svn.dealii.org/trunk@31271 0785d39b-7218-0410-832d-ea1e28bc413d

mention changes

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31270 0785d39b-7218-0410-832d-ea1e28bc413d

fix how we pick the first cell to output in DataOut when it is filtered (see tests/bits/data_out_08.cc)

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31269 0785d39b-7218-0410-832d-ea1e28bc413d

update test description and output

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31268 0785d39b-7218-0410-832d-ea1e28bc413d

fix index computation in DataOut that was completely broken if the cells are filtered

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31267 0785d39b-7218-0410-832d-ea1e28bc413d

add failing test

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31266 0785d39b-7218-0410-832d-ea1e28bc413d

add assert for a wrong index computation (fix comes soon)

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31265 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31264 0785d39b-7218-0410-832d-ea1e28bc413d

Take over r31262 from branch_port_the_testsuite

Fix opaque type problem in derivative_approximation.h

git-svn-id: https://svn.dealii.org/trunk@31263 0785d39b-7218-0410-832d-ea1e28bc413d

Fix opaque type problem in derivative_approximation.h

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31262 0785d39b-7218-0410-832d-ea1e28bc413d

Unify before sort...

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31261 0785d39b-7218-0410-832d-ea1e28bc413d

Add update_ghost_values and compress to parallel block vector for a consistent interface with the parallel non-block vector.

git-svn-id: https://svn.dealii.org/trunk@31260 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust comments

git-svn-id: https://svn.dealii.org/trunk@31259 0785d39b-7218-0410-832d-ea1e28bc413d

Delete stray 'of'

git-svn-id: https://svn.dealii.org/trunk@31258 0785d39b-7218-0410-832d-ea1e28bc413d

report correct error code

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31257 0785d39b-7218-0410-832d-ea1e28bc413d

group all-headers together

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31256 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Declare LogStream::operator<< as a non member function to get
compatible results under C++11 overload resolution rules

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31255 0785d39b-7218-0410-832d-ea1e28bc413d

Remove DeadlockKiller from tests. The rationale is

 (a) it is no longer necessary with ctest which will take care of killing
     deadlocked tests, too.

 (b) exiting on the main thread without joining the other threads first
     violates current language standard - so a significant rewrite would be
     necessary

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31254 0785d39b-7218-0410-832d-ea1e28bc413d

Print out exception details in a portable manner

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31253 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: remove stale failing_* files, provide some more information in failing RUN and DIFF stages

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31251 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Invoke sort with C locale to make the output locale independent

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31250 0785d39b-7218-0410-832d-ea1e28bc413d

Merge trunk into branch_port_the_testsuite

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31249 0785d39b-7218-0410-832d-ea1e28bc413d

Avoid 'typename' outside templates.

git-svn-id: https://svn.dealii.org/trunk@31248 0785d39b-7218-0410-832d-ea1e28bc413d

Replace Threads with WorkStream in step-9. Documentation still needs to be updated.

git-svn-id: https://svn.dealii.org/trunk@31247 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Guard correctly

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31246 0785d39b-7218-0410-832d-ea1e28bc413d

Nice try, nice try...

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31245 0785d39b-7218-0410-832d-ea1e28bc413d

Add support for Cygwin64

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31244 0785d39b-7218-0410-832d-ea1e28bc413d

Modify data_out.cc to copy the patches in parrallel.

git-svn-id: https://svn.dealii.org/trunk@31243 0785d39b-7218-0410-832d-ea1e28bc413d

Explicitly state source and result files for failing diffs so that it
is easier to find the right files when trying to update tests.

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31242 0785d39b-7218-0410-832d-ea1e28bc413d

Adjust output.

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31241 0785d39b-7218-0410-832d-ea1e28bc413d

Replace distance by using SynchronousIterators in derivative_approximation.

git-svn-id: https://svn.dealii.org/trunk@31240 0785d39b-7218-0410-832d-ea1e28bc413d

Increase precision to get under numdiffs limit.

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31239 0785d39b-7218-0410-832d-ea1e28bc413d

Guard 'noexcept' with appropriate flag.

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31238 0785d39b-7218-0410-832d-ea1e28bc413d

We indeed need to export TBB_IMPLEMENT_CPP0X=1 more freely. TODO: Is it
safe to export TBB_IMPLEMENT_CPP0X for headers used from an external
library?

git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31237 0785d39b-7218-0410-832d-ea1e28bc413d