https://gitweb.dealii.org/ - dealii-svn.git/log

bangerth [Mon, 27 May 2013 21:47:30 +0000 (21:47 +0000)]

Minor adjustment, but this doesn't fix the problem.

git-svn-id: https://svn.dealii.org/trunk@29651 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 27 May 2013 21:04:54 +0000 (21:04 +0000)]

Avoid some communication by improving on Timo's patch in r29631.

git-svn-id: https://svn.dealii.org/trunk@29650 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 27 May 2013 15:25:21 +0000 (15:25 +0000)]

Two minor improvements

git-svn-id: https://svn.dealii.org/trunk@29649 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 14:10:23 +0000 (14:10 +0000)]

fix mg number cache

git-svn-id: https://svn.dealii.org/trunk@29648 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 13:55:05 +0000 (13:55 +0000)]

multigrid copy_indices another try

git-svn-id: https://svn.dealii.org/trunk@29647 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 13:47:17 +0000 (13:47 +0000)]

multigrid copy_indices maybe more correct now?

git-svn-id: https://svn.dealii.org/trunk@29646 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 27 May 2013 13:39:23 +0000 (13:39 +0000)]

test copy indices

git-svn-id: https://svn.dealii.org/trunk@29645 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 27 May 2013 13:39:17 +0000 (13:39 +0000)]

reintroduce constraints and add debug function

git-svn-id: https://svn.dealii.org/trunk@29644 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 12:46:51 +0000 (12:46 +0000)]

fill new copy_indices even more correct

git-svn-id: https://svn.dealii.org/trunk@29643 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 12:40:22 +0000 (12:40 +0000)]

fill new copy_indices correctly

git-svn-id: https://svn.dealii.org/trunk@29642 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 12:35:42 +0000 (12:35 +0000)]

step-50: parellel dataout, use IndexSet for ConstraintMatrix

git-svn-id: https://svn.dealii.org/trunk@29641 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 12:34:19 +0000 (12:34 +0000)]

fill new mg copy_indices variables

git-svn-id: https://svn.dealii.org/trunk@29640 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 27 May 2013 12:21:01 +0000 (12:21 +0000)]

fix distributed functionality in copy to/from mg

git-svn-id: https://svn.dealii.org/trunk@29639 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 27 May 2013 12:10:02 +0000 (12:10 +0000)]

Implement TrilinosWrappers::VectorBase::locally_owned_elements for vectors with non-contiguous local range. Fix set_zero for parallel::distributed::Vector

git-svn-id: https://svn.dealii.org/trunk@29638 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 27 May 2013 11:51:02 +0000 (11:51 +0000)]

two new fields

git-svn-id: https://svn.dealii.org/trunk@29637 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 09:28:30 +0000 (09:28 +0000)]

update test

git-svn-id: https://svn.dealii.org/trunk@29636 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 09:27:45 +0000 (09:27 +0000)]

adding test that shows broken ConstraintMatrix::distribute()

git-svn-id: https://svn.dealii.org/trunk@29635 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 09:24:38 +0000 (09:24 +0000)]

git-svn-id: https://svn.dealii.org/trunk@29634 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 08:12:15 +0000 (08:12 +0000)]

step-50: do not copy coarse matrix

git-svn-id: https://svn.dealii.org/trunk@29633 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 27 May 2013 07:55:56 +0000 (07:55 +0000)]

change path and add MPI

git-svn-id: https://svn.dealii.org/trunk@29632 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 07:55:52 +0000 (07:55 +0000)]

fix deadlock in ConstraintMatrix

git-svn-id: https://svn.dealii.org/trunk@29631 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 27 May 2013 07:55:19 +0000 (07:55 +0000)]

fix compress() handling

git-svn-id: https://svn.dealii.org/trunk@29630 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 22:14:22 +0000 (22:14 +0000)]

That test looked pretty broken to me.

git-svn-id: https://svn.dealii.org/trunk@29629 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 22:12:24 +0000 (22:12 +0000)]

document bug in ConstraintMatrix::distribute()

git-svn-id: https://svn.dealii.org/trunk@29628 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 22:09:44 +0000 (22:09 +0000)]

output for one processor

git-svn-id: https://svn.dealii.org/trunk@29627 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 22:08:33 +0000 (22:08 +0000)]

add distribution for Kelly

git-svn-id: https://svn.dealii.org/trunk@29626 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 22:08:24 +0000 (22:08 +0000)]

this test had a wrong output file

git-svn-id: https://svn.dealii.org/trunk@29625 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 22:06:57 +0000 (22:06 +0000)]

Initialize test for adaptive refinement, even if it still fails

git-svn-id: https://svn.dealii.org/trunk@29624 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 22:04:50 +0000 (22:04 +0000)]

add data exchange to KElly

git-svn-id: https://svn.dealii.org/trunk@29623 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 21:41:02 +0000 (21:41 +0000)]

multigrid test for uniform meshes and sufficiently many cells

git-svn-id: https://svn.dealii.org/trunk@29622 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 21:38:09 +0000 (21:38 +0000)]

Macro for opening MPI output files automatically

git-svn-id: https://svn.dealii.org/trunk@29621 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 21:18:36 +0000 (21:18 +0000)]

more global levels

git-svn-id: https://svn.dealii.org/trunk@29620 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 21:12:57 +0000 (21:12 +0000)]

parallel multigrid, continued

git-svn-id: https://svn.dealii.org/trunk@29619 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 26 May 2013 17:33:49 +0000 (17:33 +0000)]

Use correct mail address.

git-svn-id: https://svn.dealii.org/trunk@29618 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 26 May 2013 17:30:28 +0000 (17:30 +0000)]

Allow the mail program to be overwritten by the environment.

git-svn-id: https://svn.dealii.org/trunk@29617 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sun, 26 May 2013 17:03:17 +0000 (17:03 +0000)]

Implement better swap function.

git-svn-id: https://svn.dealii.org/trunk@29616 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 16:33:03 +0000 (16:33 +0000)]

multigrid: handle levels!=n_global_levels

git-svn-id: https://svn.dealii.org/trunk@29615 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 16:30:49 +0000 (16:30 +0000)]

also fix DoFHandler::begin(level)

git-svn-id: https://svn.dealii.org/trunk@29614 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 16:19:35 +0000 (16:19 +0000)]

fix test output

git-svn-id: https://svn.dealii.org/trunk@29613 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 15:59:07 +0000 (15:59 +0000)]

fix output

git-svn-id: https://svn.dealii.org/trunk@29612 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 15:44:10 +0000 (15:44 +0000)]

Do not throw assertions from Triangulation::begin(level) and Triangulation::end(level) if level is in the global level range

git-svn-id: https://svn.dealii.org/trunk@29611 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 15:42:59 +0000 (15:42 +0000)]

step-50: add compress calls, fix output

git-svn-id: https://svn.dealii.org/trunk@29610 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 26 May 2013 15:41:12 +0000 (15:41 +0000)]

Fix an oversight (thanks to Alexander Grayver for pointing it out).

git-svn-id: https://svn.dealii.org/trunk@29609 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 15:40:11 +0000 (15:40 +0000)]

add a missing compress in multigrid

git-svn-id: https://svn.dealii.org/trunk@29608 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 26 May 2013 15:16:12 +0000 (15:16 +0000)]

Add an argument to IndexSet::add_indices. Use this to make a function in BlockVector significantly faster.

git-svn-id: https://svn.dealii.org/trunk@29607 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 14:00:14 +0000 (14:00 +0000)]

fix test output

git-svn-id: https://svn.dealii.org/trunk@29606 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 13:59:55 +0000 (13:59 +0000)]

add failing test

git-svn-id: https://svn.dealii.org/trunk@29605 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sun, 26 May 2013 13:02:06 +0000 (13:02 +0000)]

multigrid in parallel: only track own dofs

git-svn-id: https://svn.dealii.org/trunk@29604 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 26 May 2013 09:37:10 +0000 (09:37 +0000)]

simplify logic

git-svn-id: https://svn.dealii.org/trunk@29603 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 21:13:30 +0000 (21:13 +0000)]

add dummy compress function to SparseMatrix

git-svn-id: https://svn.dealii.org/trunk@29602 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 20:58:04 +0000 (20:58 +0000)]

do elimination of boundary columns locally

git-svn-id: https://svn.dealii.org/trunk@29601 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 18:03:07 +0000 (18:03 +0000)]

fix output

git-svn-id: https://svn.dealii.org/trunk@29599 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 17:59:51 +0000 (17:59 +0000)]

matrix test with boundary conditions

git-svn-id: https://svn.dealii.org/trunk@29598 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 15:24:31 +0000 (15:24 +0000)]

step-50: better matrix construction

git-svn-id: https://svn.dealii.org/trunk@29597 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 15:22:20 +0000 (15:22 +0000)]

transfer prebuilt with hanging nodes

git-svn-id: https://svn.dealii.org/trunk@29596 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 25 May 2013 13:02:30 +0000 (13:02 +0000)]

New test.

git-svn-id: https://svn.dealii.org/trunk@29595 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 25 May 2013 12:46:37 +0000 (12:46 +0000)]

New tests.

git-svn-id: https://svn.dealii.org/trunk@29594 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 25 May 2013 12:29:14 +0000 (12:29 +0000)]

Unify the various implementations of ConstraintMatrix::distribute using the new scheme. This includes making it now also work for objects of type PETScWrappers::MPI::BlockVector. Compared to the previous implementation, it now also works if constraints have inhomogeneities.

git-svn-id: https://svn.dealii.org/trunk@29593 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 25 May 2013 12:23:00 +0000 (12:23 +0000)]

Fix IndexSet::operator== which we have, mysteriously, gotten wrong...

git-svn-id: https://svn.dealii.org/trunk@29592 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 08:58:22 +0000 (08:58 +0000)]

fix new test

git-svn-id: https://svn.dealii.org/trunk@29591 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:53:53 +0000 (08:53 +0000)]

remove misleading comment

git-svn-id: https://svn.dealii.org/trunk@29590 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 08:50:25 +0000 (08:50 +0000)]

debug output for MGTransferPrebuilt
remove deprecated function call in mg_block_smoother.h

git-svn-id: https://svn.dealii.org/trunk@29589 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:49:29 +0000 (08:49 +0000)]

cleanup test

git-svn-id: https://svn.dealii.org/trunk@29588 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:48:01 +0000 (08:48 +0000)]

and some more MG bugs from yesterday

git-svn-id: https://svn.dealii.org/trunk@29587 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:24:07 +0000 (08:24 +0000)]

add failing test

git-svn-id: https://svn.dealii.org/trunk@29586 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sat, 25 May 2013 08:23:31 +0000 (08:23 +0000)]

Fix a stupid deadlock.

git-svn-id: https://svn.dealii.org/trunk@29585 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:22:36 +0000 (08:22 +0000)]

fix stuff I broke yesterday

git-svn-id: https://svn.dealii.org/trunk@29584 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 08:12:39 +0000 (08:12 +0000)]

remove deprecated warninngs and prepare a new test
still waiting for boundary lists to be fixed

git-svn-id: https://svn.dealii.org/trunk@29583 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sat, 25 May 2013 07:49:44 +0000 (07:49 +0000)]

Use locks only when modifying entries, not whenever accessing through get_prolongation_matrix

git-svn-id: https://svn.dealii.org/trunk@29582 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 07:27:26 +0000 (07:27 +0000)]

prepare transfer for Trilinos matrices

git-svn-id: https://svn.dealii.org/trunk@29581 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:19:35 +0000 (19:19 +0000)]

New test.

git-svn-id: https://svn.dealii.org/trunk@29580 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:18:52 +0000 (19:18 +0000)]

Can't call vec.l1_norm() if not on all processors.

git-svn-id: https://svn.dealii.org/trunk@29579 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:02:27 +0000 (19:02 +0000)]

Add locally_owned_elements() to all vector classes.

git-svn-id: https://svn.dealii.org/trunk@29578 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 18:59:19 +0000 (18:59 +0000)]

Add complete_index_set().

git-svn-id: https://svn.dealii.org/trunk@29577 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 18:43:56 +0000 (18:43 +0000)]

Fix locks.

git-svn-id: https://svn.dealii.org/trunk@29576 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Fri, 24 May 2013 16:22:37 +0000 (16:22 +0000)]

output all levels
allow for negative subdomains
simplify some redundant expressions

git-svn-id: https://svn.dealii.org/trunk@29575 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 16:11:47 +0000 (16:11 +0000)]

ignore non local cells in mg*

git-svn-id: https://svn.dealii.org/trunk@29574 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 15:46:18 +0000 (15:46 +0000)]

Avoid warning about possibly uninitialized variables.

git-svn-id: https://svn.dealii.org/trunk@29573 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 14:19:53 +0000 (14:19 +0000)]

remove debug output

git-svn-id: https://svn.dealii.org/trunk@29572 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 14:02:55 +0000 (14:02 +0000)]

fix bug in distribute mg dofs in parallel

git-svn-id: https://svn.dealii.org/trunk@29571 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 13:55:20 +0000 (13:55 +0000)]

step-50: add gridout

git-svn-id: https://svn.dealii.org/trunk@29570 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 13:15:12 +0000 (13:15 +0000)]

Adjust output.

git-svn-id: https://svn.dealii.org/trunk@29569 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 13:11:25 +0000 (13:11 +0000)]

simplify test

git-svn-id: https://svn.dealii.org/trunk@29568 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:58:47 +0000 (12:58 +0000)]

update test

git-svn-id: https://svn.dealii.org/trunk@29567 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:56:20 +0000 (12:56 +0000)]

add broken test

git-svn-id: https://svn.dealii.org/trunk@29566 0785d39b-7218-0410-832d-ea1e28bc413d

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koecher [Fri, 24 May 2013 12:52:52 +0000 (12:52 +0000)]

added some (void)i to avoid warnings in optimized mode to tria_accessor.templates.h

git-svn-id: https://svn.dealii.org/trunk@29565 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:20:58 +0000 (12:20 +0000)]

give multigrid hint in step-50

git-svn-id: https://svn.dealii.org/trunk@29564 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:18:17 +0000 (12:18 +0000)]

add comment

git-svn-id: https://svn.dealii.org/trunk@29563 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:15:12 +0000 (12:15 +0000)]

add cmake stuff for step-50

git-svn-id: https://svn.dealii.org/trunk@29562 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 09:53:12 +0000 (09:53 +0000)]

Initialize restriction and prolongation matrix in FESystem and FE_Q only upon request. This significantly reduces memory requirements for higher order elements as most of these matrices are never needed, e.g. anisotropic ones without anisotropic refinement.

git-svn-id: https://svn.dealii.org/trunk@29561 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 05:04:17 +0000 (05:04 +0000)]

Provide Vector::supports_distributed_data for all vector classes.

git-svn-id: https://svn.dealii.org/trunk@29560 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 04:30:55 +0000 (04:30 +0000)]

Move exception declaration out of function-local scope to a globally visible scope so that the class has external linkage as required by the standard.

git-svn-id: https://svn.dealii.org/trunk@29559 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 23 May 2013 19:19:51 +0000 (19:19 +0000)]

Implement ConstraintMatrix::distribute() in a different way. Adjust testcase.

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steigemann [Thu, 23 May 2013 10:44:49 +0000 (10:44 +0000)]

small fix in fe_tools.cc

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kronbichler [Thu, 23 May 2013 09:36:13 +0000 (09:36 +0000)]

Mention change.

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kronbichler [Thu, 23 May 2013 09:36:03 +0000 (09:36 +0000)]

Patch for FETools::back_interpolate for parallel::distributed::Vector by Martin Steigemann.

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bangerth [Wed, 22 May 2013 22:34:49 +0000 (22:34 +0000)]

One more.

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maier [Wed, 22 May 2013 20:36:34 +0000 (20:36 +0000)]

CMake: Rename configure_umfpack.cmake to configura_1_umfpack.cmake so that
it gets processed before configure_petsc.cmake

git-svn-id: https://svn.dealii.org/trunk@29553 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 22 May 2013 20:08:44 +0000 (20:08 +0000)]

Adjust output.

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kronbichler [Wed, 22 May 2013 14:57:12 +0000 (14:57 +0000)]

Make compile without C++11.

git-svn-id: https://svn.dealii.org/trunk@29551 0785d39b-7218-0410-832d-ea1e28bc413d

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