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https://gitweb.dealii.org/ - dealii.git/log
Martin Kronbichler [Wed, 3 Apr 2024 13:10:32 +0000 (15:10 +0200)]
Merge pull request #16841 from bangerth/type-to-string
Augment documentation of Utilities::type_to_string().
Martin Kronbichler [Wed, 3 Apr 2024 07:28:19 +0000 (09:28 +0200)]
Merge pull request #16837 from bangerth/vec-array-2
Provide an implementation for VectorizedArray::dot_product().
Wolfgang Bangerth [Wed, 3 Apr 2024 03:09:14 +0000 (21:09 -0600)]
Augment documentation of Utilities::type_to_string().
Rene Gassmoeller [Tue, 2 Apr 2024 18:20:10 +0000 (14:20 -0400)]
Merge pull request #16833 from kronbichler/fgmres_orth
Switch SolverFGMRES to new delayed classical Gram-Schmidt
Martin Kronbichler [Tue, 2 Apr 2024 15:10:12 +0000 (17:10 +0200)]
Merge pull request #16828 from drwells/qprojector-same-orientation
QProjector: internally use the combined orientation.
Wolfgang Bangerth [Tue, 2 Apr 2024 03:23:08 +0000 (21:23 -0600)]
Provide a default implementation for VectorizedArray::dot_product().
David Wells [Sun, 31 Mar 2024 20:02:27 +0000 (16:02 -0400)]
QProjector: internally use the combined orientation.
This replaces a unique indexing scheme for orientations with the standard one.
David Wells [Tue, 2 Apr 2024 13:24:31 +0000 (09:24 -0400)]
FE_BDM: un-hardcode some QProjector properties.
Martin Kronbichler [Tue, 2 Apr 2024 07:13:37 +0000 (09:13 +0200)]
Merge pull request #16836 from bangerth/vec-array
Minor updates to VectorizedArray.
Wolfgang Bangerth [Tue, 2 Apr 2024 03:11:14 +0000 (21:11 -0600)]
Minor updates to VectorizedArray.
David Wells [Tue, 2 Apr 2024 02:35:01 +0000 (22:35 -0400)]
Merge pull request #16831 from kronbichler/fix_n_vertices
Fix two places where TriaAccessor::n_vertices is called repeatedly
Martin Kronbichler [Mon, 1 Apr 2024 21:04:37 +0000 (23:04 +0200)]
Switch SolverFGMRES to new delayed classical Gram-Schmidt
Martin Kronbichler [Mon, 1 Apr 2024 19:27:41 +0000 (21:27 +0200)]
Fix two places where CellAccessor::n_vertices is called repeatedly
Martin Kronbichler [Mon, 1 Apr 2024 16:49:47 +0000 (18:49 +0200)]
Merge pull request #16821 from drwells/qprojector-description-orientation
Deprecate some more (bool, bool, bool) orientation functions
David Wells [Mon, 1 Apr 2024 13:12:28 +0000 (09:12 -0400)]
Improve a comment.
David Wells [Sat, 30 Mar 2024 12:24:29 +0000 (08:24 -0400)]
Remove calls to said functions on the library.
David Wells [Sat, 30 Mar 2024 11:57:44 +0000 (07:57 -0400)]
Deprecate (bool, bool, bool) QProjector functions.
Daniel Arndt [Mon, 1 Apr 2024 12:33:36 +0000 (08:33 -0400)]
Merge pull request #16804 from bangerth/comsol-tri
Add a test for COMSOL .mphtxt triangle meshes.
Martin Kronbichler [Sun, 31 Mar 2024 18:10:37 +0000 (20:10 +0200)]
Merge pull request #16823 from bangerth/unalign
Revert aligning tensors
Wolfgang Bangerth [Thu, 28 Mar 2024 18:35:31 +0000 (12:35 -0600)]
Add a test for COMSOL .mphtxt triangle meshes.
Wolfgang Bangerth [Sat, 30 Mar 2024 15:04:10 +0000 (09:04 -0600)]
Revert "No longer output the size of tensors into output file of a test."
This reverts commit
a492d57657769bdc38a65c2532f1711a55abab21 .
Wolfgang Bangerth [Sat, 30 Mar 2024 15:03:43 +0000 (09:03 -0600)]
Revert "Add a changelog entry for the alignment of tensors."
This reverts commit
d14a12db1cc7b91380a143350e613442362c876e .
Wolfgang Bangerth [Sat, 30 Mar 2024 15:03:26 +0000 (09:03 -0600)]
Revert "Align Tensor<rank,dim,Number> to make vectorization possible."
This reverts commit
d6a65a9b929b1862a78de843ceaa7848e5a588e3 .
Wolfgang Bangerth [Sat, 30 Mar 2024 15:01:57 +0000 (09:01 -0600)]
Merge pull request #16820 from tamiko/fix_avx512_fpe
distributed/tria.cc: avoid FPE due to undefined behavior
Wolfgang Bangerth [Sat, 30 Mar 2024 14:59:56 +0000 (08:59 -0600)]
Merge pull request #16814 from simonsticko/codim_in_getname
Add codimension in get_name() for a few elements
Matthias Maier [Sat, 30 Mar 2024 00:49:16 +0000 (19:49 -0500)]
distributed/tria.cc: avoid FPE due to undefined behavior
The following construct
```
static_cast<types::subdomain_id>(this_sc_point[dim])
```
triggers a floating point exception when the stored double is -1.0 (at
least with gcc-11 and avx512 instructions enabled).
Judging from cppreference [1] this is undefined behavior:
"""
A prvalue of floating-point type can be converted to a prvalue of any
integer type. The fractional part is truncated, that is, the fractional
part is discarded.
If the truncated value cannot fit into the destination type, the
behavior is undefined (even when the destination type is unsigned,
modulo arithmetic does not apply).
"""
Thus, work around the issue by explicitly setting negative values to
`numbers::invalid_subdomain_id` if we encounter -1.
[1] https://en.cppreference.com/w/cpp/language/implicit_conversion
Matthias Maier [Sat, 30 Mar 2024 00:28:21 +0000 (00:28 +0000)]
Merge pull request #16816 from bangerth/fix-test
No longer output the size of tensors into output file of a test.
Matthias Maier [Sat, 30 Mar 2024 00:27:36 +0000 (00:27 +0000)]
Merge pull request #16815 from bangerth/fix-particle-size-2
Fix a second place where particles compute the size of a buffer.
Wolfgang Bangerth [Fri, 29 Mar 2024 22:30:32 +0000 (16:30 -0600)]
No longer output the size of tensors into output file of a test.
Wolfgang Bangerth [Fri, 29 Mar 2024 19:21:50 +0000 (13:21 -0600)]
Fix a second place where particles compute the size of a buffer.
Martin Kronbichler [Fri, 29 Mar 2024 19:49:19 +0000 (20:49 +0100)]
Merge pull request #16813 from bangerth/fix-particle-size
Allocate the right amount of memory when serializing particles.
Daniel Arndt [Fri, 29 Mar 2024 17:30:56 +0000 (13:30 -0400)]
Merge pull request #16788 from kronbichler/fix_asserts
FEEvaluation: Add static asserts to functions selected by enable_if
Simon Sticko [Fri, 29 Mar 2024 08:11:57 +0000 (09:11 +0100)]
Add codimension in get_name() for a few elements
Martin Kronbichler [Fri, 29 Mar 2024 16:46:53 +0000 (17:46 +0100)]
Merge pull request #16795 from Rombur/python_binding
Add three GridGenerator functions to the python wrappers
Wolfgang Bangerth [Fri, 29 Mar 2024 16:17:56 +0000 (10:17 -0600)]
Allocate the right amount of memory when serializing particles.
Daniel Arndt [Fri, 29 Mar 2024 12:20:03 +0000 (08:20 -0400)]
Merge pull request #16806 from drwells/remove-hardcoded-inverse-orientation
Remove hardcoded inverse orientation
Martin Kronbichler [Fri, 29 Mar 2024 07:06:47 +0000 (08:06 +0100)]
Merge pull request #16812 from tamiko/fix_tests_avx_05
Test grid/closest_point: guard against roundoff error
Martin Kronbichler [Fri, 29 Mar 2024 07:06:05 +0000 (08:06 +0100)]
Merge pull request #16811 from tamiko/fix_tests_avx_04
Test trilinos/precondition: Relax iteration bounds
Martin Kronbichler [Fri, 29 Mar 2024 07:05:18 +0000 (08:05 +0100)]
Merge pull request #16810 from tamiko/fix_tests_avx_03
Test grid/grid_generator_09: add another output variant
Martin Kronbichler [Fri, 29 Mar 2024 07:04:35 +0000 (08:04 +0100)]
Merge pull request #16809 from tamiko/fix_tests_avx_02
Test mappings/mapping_q_real_to_unit_internal: add avx256 output variant
Martin Kronbichler [Fri, 29 Mar 2024 07:02:56 +0000 (08:02 +0100)]
Merge pull request #16808 from tamiko/fix_tests_avx_01
Test cgal/cgal_triangulation_05: add avx output variants
Martin Kronbichler [Fri, 29 Mar 2024 07:01:58 +0000 (08:01 +0100)]
Merge pull request #16805 from simonsticko/hp_get_present_reinit_not_called
Add assert on reinit() being called before get_present_fe_values()
David Wells [Mon, 25 Mar 2024 16:26:36 +0000 (12:26 -0400)]
GridTools: remove another hard-coded inverse orientation table.
David Wells [Mon, 25 Mar 2024 16:25:35 +0000 (12:25 -0400)]
ReferenceCell: permit face index calculations for lines.
This way we can call standard_to_real_face_vertex for all supported topological
dimensions.
Matthias Maier [Fri, 29 Mar 2024 00:15:40 +0000 (19:15 -0500)]
Test grid/closest_point: guard against roundoff error
Matthias Maier [Fri, 29 Mar 2024 00:00:13 +0000 (19:00 -0500)]
Test trilinos/precondition: Relax iteration bounds
Matthias Maier [Thu, 28 Mar 2024 23:37:11 +0000 (18:37 -0500)]
Test grid/grid_generator_09: add another output variant
Matthias Maier [Thu, 28 Mar 2024 23:27:50 +0000 (18:27 -0500)]
Test mappings/mapping_q_real_to_unit_internal: add avx256 output variant
Matthias Maier [Thu, 28 Mar 2024 22:58:01 +0000 (17:58 -0500)]
Test cgal/cgal_triangulation_05: add avx output variants
The order of vertices that cgal writes out to the mesh are not stable
and depend on optimization, standard library and instruction set used.
Add output variants for avx256/avx512
David Wells [Mon, 25 Mar 2024 15:03:05 +0000 (11:03 -0400)]
Triangulation: remove hard-coded inverse orientation tables.
Peter Munch [Thu, 28 Mar 2024 20:06:43 +0000 (21:06 +0100)]
Merge pull request #16780 from drwells/consistent-periodic-orientation-encoding
Consistent periodic orientation encoding
Wolfgang Bangerth [Thu, 28 Mar 2024 19:55:52 +0000 (13:55 -0600)]
Merge pull request #16801 from kronbichler/fix_tensor_mapping
MappingQ: Do not assume contiguous storage of Tensor<2, dim>
Simon Sticko [Thu, 28 Mar 2024 08:29:10 +0000 (09:29 +0100)]
Add assert on reinit() being called before get_present_fe_values()
If you call hp::FEValues::get_present_fe_values() and forgot to call
reinit() first, you presently get a poor error message. Add an assert
that present_fe_values_index is not invalid with a better error
message.
Daniel Arndt [Thu, 28 Mar 2024 18:32:11 +0000 (14:32 -0400)]
Merge pull request #16802 from bangerth/fix-test
Fix compilation of a test.
Martin Kronbichler [Thu, 28 Mar 2024 18:07:12 +0000 (19:07 +0100)]
Merge pull request #16803 from bangerth/doc
Augment documentation of class Tensor.
Wolfgang Bangerth [Thu, 28 Mar 2024 17:52:41 +0000 (11:52 -0600)]
Merge pull request #16797 from tamiko/make_statement_more_readable
`base/tensor.h`: make a statement a bit easier to read
Martin Kronbichler [Thu, 28 Mar 2024 14:57:15 +0000 (15:57 +0100)]
MappingQ: Do not assume contiguous storage of Tensor<2, dim>
Wolfgang Bangerth [Thu, 28 Mar 2024 16:12:30 +0000 (10:12 -0600)]
Augment documentation of class Tensor.
Wolfgang Bangerth [Thu, 28 Mar 2024 16:10:10 +0000 (10:10 -0600)]
Fix compilation of a test.
Martin Kronbichler [Thu, 28 Mar 2024 14:53:25 +0000 (15:53 +0100)]
Merge pull request #16798 from simonsticko/mapping_c1_instantiate_codims
Instantiate MappingC1 for dim <= spacedim
Martin Kronbichler [Tue, 26 Mar 2024 16:43:55 +0000 (17:43 +0100)]
FEEvaluation: Add static asserts to functions selected by enable_if
Daniel Arndt [Thu, 28 Mar 2024 12:07:25 +0000 (08:07 -0400)]
Merge pull request #16799 from simonsticko/grid_in_author_names
Remove leftover author names in GridIn.
Simon Sticko [Thu, 28 Mar 2024 09:06:07 +0000 (10:06 +0100)]
Remove leftover author names in GridIn.
As decided in #10416
Simon Sticko [Thu, 28 Mar 2024 07:06:10 +0000 (08:06 +0100)]
Instantiate MappingC1 for dim <= spacedim
The mapping is not implemened for dim!=spacedim, but it is better to
get ExcNotImplemented than missing symbols.
Matthias Maier [Thu, 28 Mar 2024 01:32:13 +0000 (20:32 -0500)]
base/tensor.h: make a statement easier to read
Martin Kronbichler [Wed, 27 Mar 2024 18:00:55 +0000 (19:00 +0100)]
Merge pull request #16771 from bangerth/tensor-alignment
Align Tensor<rank,dim,Number> to make vectorization possible.
Daniel Arndt [Wed, 27 Mar 2024 17:52:59 +0000 (13:52 -0400)]
Merge pull request #16787 from kronbichler/fix_submit_gradient
FEEvaluation: Fix submit_gradient in 1D
Daniel Arndt [Wed, 27 Mar 2024 17:01:27 +0000 (13:01 -0400)]
Merge pull request #16793 from masterleinad/fix_cuda_ci
Fix CI using Kokkos+Cuda and CMake 3.28.4 and later
Bruno Turcksin [Wed, 27 Mar 2024 16:43:27 +0000 (12:43 -0400)]
Add changelog
Bruno Turcksin [Fri, 22 Mar 2024 13:27:39 +0000 (09:27 -0400)]
Add GridGenerator::hyper_ball_balanced to the python wrappers
Bruno Turcksin [Fri, 22 Mar 2024 13:05:11 +0000 (09:05 -0400)]
Add GridGenerator::channel_with_cylinder to the python wrappers
Bruno Turcksin [Wed, 20 Mar 2024 14:24:13 +0000 (10:24 -0400)]
Add GridGenerator::plate_with_a_hole to the python wrappers
Wolfgang Bangerth [Wed, 27 Mar 2024 16:40:16 +0000 (10:40 -0600)]
Merge pull request #16784 from masterleinad/fix_tpetra_macro_warning
Fix compiler warning for macro usage in TpetraWrappers
David Wells [Wed, 27 Mar 2024 14:16:37 +0000 (10:16 -0400)]
Merge pull request #16791 from bangerth/error
Provide a better error message.
David Wells [Wed, 27 Mar 2024 14:15:01 +0000 (10:15 -0400)]
Merge pull request #16790 from bangerth/tensor-begin-end-raw
Remove/deprecate Tensor::begin/end_raw().
Daniel Arndt [Wed, 27 Mar 2024 14:13:33 +0000 (10:13 -0400)]
Try 3.27.9
Martin Kronbichler [Wed, 27 Mar 2024 14:12:22 +0000 (15:12 +0100)]
Update changelog entry
Martin Kronbichler [Tue, 26 Mar 2024 16:40:05 +0000 (17:40 +0100)]
New test case
Martin Kronbichler [Tue, 26 Mar 2024 16:39:48 +0000 (17:39 +0100)]
FEEvaluation: Fix submit_gradient in 1D
Daniel Arndt [Wed, 27 Mar 2024 13:16:26 +0000 (09:16 -0400)]
Fix CI using Kokkos+Cuda and CMake 3.29.0
David Wells [Wed, 27 Mar 2024 13:10:39 +0000 (09:10 -0400)]
Merge pull request #16789 from kronbichler/restore_assertions
FEEvaluation: Ensure assertions in get_value/gradient are working
Daniel Arndt [Wed, 27 Mar 2024 12:57:16 +0000 (08:57 -0400)]
Use ifdef DEBUG instead
Wolfgang Bangerth [Tue, 26 Mar 2024 23:40:26 +0000 (17:40 -0600)]
Provide a better error message.
Wolfgang Bangerth [Tue, 26 Mar 2024 23:29:49 +0000 (17:29 -0600)]
Add a changelog entry.
Wolfgang Bangerth [Tue, 26 Mar 2024 23:23:06 +0000 (17:23 -0600)]
Remove/deprecate Tensor::begin/end_raw().
Martin Kronbichler [Tue, 26 Mar 2024 16:53:41 +0000 (17:53 +0100)]
FEEvaluation: Ensure assertions in get_value/gradient are working
Wolfgang Bangerth [Tue, 26 Mar 2024 15:23:53 +0000 (09:23 -0600)]
Add a changelog entry for the alignment of tensors.
Wolfgang Bangerth [Thu, 21 Mar 2024 17:45:37 +0000 (11:45 -0600)]
Align Tensor<rank,dim,Number> to make vectorization possible.
Wolfgang Bangerth [Mon, 25 Mar 2024 00:53:21 +0000 (18:53 -0600)]
Add a changelog entry.
Wolfgang Bangerth [Mon, 25 Mar 2024 00:53:09 +0000 (18:53 -0600)]
Address an alignment issue in Utilities::unpack().
Martin Kronbichler [Tue, 26 Mar 2024 09:03:35 +0000 (10:03 +0100)]
Merge pull request #16782 from drwells/openmpi-5
Fix test environment variables for OpenMPI 5.
Peter Munch [Tue, 26 Mar 2024 07:10:06 +0000 (08:10 +0100)]
Merge pull request #16765 from kronbichler/fe_point_evaluation_spacedim
FEPointEvaluation: Work towards dim < spacedim
Marc Fehling [Tue, 26 Mar 2024 05:31:14 +0000 (23:31 -0600)]
Merge pull request #16785 from tamiko/fix_opencascade_configure
CMake: fix OpenCASCADE-7.8 configure
Matthias Maier [Mon, 25 Mar 2024 23:55:25 +0000 (18:55 -0500)]
CMake: fix opencascade component
Peter Munch [Mon, 25 Mar 2024 18:58:46 +0000 (19:58 +0100)]
Merge pull request #16776 from kronbichler/simplify_fe_evaluation
FEEvaluation: Remove specialized Access class
Daniel Arndt [Mon, 25 Mar 2024 17:46:50 +0000 (13:46 -0400)]
Fix compiler warning for macro usage in TpetraWrappers
David Wells [Mon, 25 Mar 2024 17:23:54 +0000 (13:23 -0400)]
Fix test environment variables for OpenMPI 5.
Wolfgang Bangerth [Mon, 25 Mar 2024 14:55:58 +0000 (08:55 -0600)]
Merge pull request #16781 from kinnewig/tpetra_wrappers_local_range
Add local_range() and in_local_range() to LA::TpetraWrappers::Vector
David Wells [Mon, 25 Mar 2024 12:27:10 +0000 (08:27 -0400)]
QA: clean up some comments and constants.
None of these are technically wrong but we need to replace 0u by the explicit
reversed line orientation so that 0u can become the default later.
David Wells [Mon, 25 Mar 2024 03:52:17 +0000 (23:52 -0400)]
GridTools::orthogonal_equality(): simplify.
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