]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
9 years agorename and correctly guard arpack/parpack tests
Matthias Maier [Sat, 31 Jan 2015 17:47:44 +0000 (18:47 +0100)]
rename and correctly guard arpack/parpack tests

9 years agoMerge pull request #265 from davydden/parpack
Matthias Maier [Sat, 31 Jan 2015 17:40:40 +0000 (18:40 +0100)]
Merge pull request #265 from davydden/parpack

Provide an interface to the parpack solver

9 years agoMerge pull request #480 from tjhei/documentation
Wolfgang Bangerth [Sat, 31 Jan 2015 03:23:56 +0000 (21:23 -0600)]
Merge pull request #480 from tjhei/documentation

documentation fixes,mostly typos

9 years agodocumentation fixes,mostly typos 480/head
Timo Heister [Fri, 30 Jan 2015 19:37:49 +0000 (14:37 -0500)]
documentation fixes,mostly typos

9 years agoMerge pull request #478 from kronbichler/master
Matthias Maier [Wed, 28 Jan 2015 22:05:31 +0000 (23:05 +0100)]
Merge pull request #478 from kronbichler/master

Avoid using removed deprecated function

9 years agoAvoid using removed deprecated function 478/head
Martin Kronbichler [Wed, 28 Jan 2015 21:01:51 +0000 (22:01 +0100)]
Avoid using removed deprecated function

9 years agoMerge pull request #477 from kronbichler/master
Wolfgang Bangerth [Wed, 28 Jan 2015 12:39:25 +0000 (06:39 -0600)]
Merge pull request #477 from kronbichler/master

Fix latex formula

9 years agoFix latex formula 477/head
Martin Kronbichler [Wed, 28 Jan 2015 10:39:51 +0000 (11:39 +0100)]
Fix latex formula

9 years agoMerge pull request #475 from tamiko/fix_bundled_boost
Martin Kronbichler [Tue, 27 Jan 2015 12:49:52 +0000 (13:49 +0100)]
Merge pull request #475 from tamiko/fix_bundled_boost

Fix linkage for bundled boost

9 years agoadd a changelog entry 475/head
Matthias Maier [Tue, 27 Jan 2015 11:38:18 +0000 (12:38 +0100)]
add a changelog entry

9 years agoCMake: Bugfix: Add -lrt to the link interface in case of bundled boost
Matthias Maier [Tue, 27 Jan 2015 11:36:12 +0000 (12:36 +0100)]
CMake: Bugfix: Add -lrt to the link interface in case of bundled boost

9 years agoCMake: Fix FIND_SYSTEM_LIBRARY macro
Matthias Maier [Tue, 27 Jan 2015 11:47:27 +0000 (12:47 +0100)]
CMake: Fix FIND_SYSTEM_LIBRARY macro

9 years agoMerge pull request #473 from bangerth/remove-deprecated-functions-5
Martin Kronbichler [Mon, 26 Jan 2015 07:48:13 +0000 (08:48 +0100)]
Merge pull request #473 from bangerth/remove-deprecated-functions-5

More removal of deprecated functions and classes

9 years agoRemove deprecated classes PreconditionedMatrix and PreconditionLACSolver. 473/head
Wolfgang Bangerth [Sun, 25 Jan 2015 19:04:58 +0000 (13:04 -0600)]
Remove deprecated classes PreconditionedMatrix and PreconditionLACSolver.

9 years agoRemove deprecated class FEEvaluationDGP.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:54:21 +0000 (12:54 -0600)]
Remove deprecated class FEEvaluationDGP.

9 years agoRemove deprecated classes FEEvaluationGeneral and FEEvaluationGL.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:53:07 +0000 (12:53 -0600)]
Remove deprecated classes FEEvaluationGeneral and FEEvaluationGL.

9 years agoRemove deprecated functions Multigrid::vmult*
Wolfgang Bangerth [Sun, 25 Jan 2015 18:51:50 +0000 (12:51 -0600)]
Remove deprecated functions Multigrid::vmult*

9 years agoRemove deprecated class MGMatrix.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:45:52 +0000 (12:45 -0600)]
Remove deprecated class MGMatrix.

9 years agoRemove deprecated function MGTools::extract_inner_interface_dofs.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:22:42 +0000 (12:22 -0600)]
Remove deprecated function MGTools::extract_inner_interface_dofs.

9 years agoRemove deprecated function MGTools::apply_boundary_values.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:20:39 +0000 (12:20 -0600)]
Remove deprecated function MGTools::apply_boundary_values.

9 years agoRemove deprecated version of MGTools::count_dofs_per_component.
Wolfgang Bangerth [Sun, 25 Jan 2015 18:19:03 +0000 (12:19 -0600)]
Remove deprecated version of MGTools::count_dofs_per_component.

9 years agoMerge pull request #471 from bangerth/fix-test
Martin Kronbichler [Sun, 25 Jan 2015 12:58:50 +0000 (13:58 +0100)]
Merge pull request #471 from bangerth/fix-test

Fix a test.

9 years agoFix a test. 471/head
Wolfgang Bangerth [Sun, 25 Jan 2015 04:39:51 +0000 (22:39 -0600)]
Fix a test.

9 years agoadded tests 265/head
Denis Davydov [Sat, 24 Jan 2015 17:14:07 +0000 (18:14 +0100)]
added tests

9 years agoadded an PArpack eigensolver class
Denis Davydov [Sat, 24 Jan 2015 16:37:34 +0000 (17:37 +0100)]
added an PArpack eigensolver class

9 years agoMerge pull request #469 from bangerth/remove-deprecated-functions-4
Luca Heltai [Sat, 24 Jan 2015 10:41:36 +0000 (11:41 +0100)]
Merge pull request #469 from bangerth/remove-deprecated-functions-4

Remove deprecated functions 4

9 years agoRemove deprecated function BlockVector::scale(). 469/head
Wolfgang Bangerth [Sat, 24 Jan 2015 01:52:40 +0000 (19:52 -0600)]
Remove deprecated function BlockVector::scale().

9 years agoRemove deprecated function parallel::distributed::BlockVector::scale().
Wolfgang Bangerth [Sat, 24 Jan 2015 01:50:18 +0000 (19:50 -0600)]
Remove deprecated function parallel::distributed::BlockVector::scale().

9 years agoRemove deprecated function PreconditionBlock::size().
Wolfgang Bangerth [Sat, 24 Jan 2015 01:47:42 +0000 (19:47 -0600)]
Remove deprecated function PreconditionBlock::size().

9 years agoRemove deprecated function GridTools::extract_boundary_mesh().
Wolfgang Bangerth [Sat, 24 Jan 2015 01:46:16 +0000 (19:46 -0600)]
Remove deprecated function GridTools::extract_boundary_mesh().

9 years agoRemove deprecated function GridTools::create_union_triangulation().
Wolfgang Bangerth [Sat, 24 Jan 2015 01:44:46 +0000 (19:44 -0600)]
Remove deprecated function GridTools::create_union_triangulation().

9 years agoRemove deprecated version of parallel::distributed::Vector::scale().
Wolfgang Bangerth [Sat, 24 Jan 2015 01:00:37 +0000 (19:00 -0600)]
Remove deprecated version of parallel::distributed::Vector::scale().

9 years agoRemove deprecated version of parallel::distributed::Vector::compress_finish().
Wolfgang Bangerth [Sat, 24 Jan 2015 00:59:28 +0000 (18:59 -0600)]
Remove deprecated version of parallel::distributed::Vector::compress_finish().

9 years agoRemove deprecated constructor of SolverSelector.
Wolfgang Bangerth [Sat, 24 Jan 2015 00:56:26 +0000 (18:56 -0600)]
Remove deprecated constructor of SolverSelector.

9 years agoRemove deprecated function SparsityPattern::partition.
Wolfgang Bangerth [Sat, 24 Jan 2015 00:55:44 +0000 (18:55 -0600)]
Remove deprecated function SparsityPattern::partition.

9 years agoRemove deprecated functions BlockMatrixArray and BlockTrianglePreconditioner.
Wolfgang Bangerth [Fri, 23 Jan 2015 15:31:16 +0000 (09:31 -0600)]
Remove deprecated functions BlockMatrixArray and BlockTrianglePreconditioner.

9 years agoRemove deprecated variants of DoFTools::make_periodicity_constraints().
Wolfgang Bangerth [Fri, 23 Jan 2015 13:41:43 +0000 (07:41 -0600)]
Remove deprecated variants of DoFTools::make_periodicity_constraints().

9 years agoRemove deprecated constructors of SparsityPattern iterators.
Wolfgang Bangerth [Fri, 23 Jan 2015 13:06:06 +0000 (07:06 -0600)]
Remove deprecated constructors of SparsityPattern iterators.

9 years agoRemove deprecated typedef CompressedBlockSparsityPattern.
Wolfgang Bangerth [Fri, 23 Jan 2015 00:06:15 +0000 (18:06 -0600)]
Remove deprecated typedef CompressedBlockSparsityPattern.

9 years agoRemove deprecated functions Mapping::transform_*
Wolfgang Bangerth [Fri, 23 Jan 2015 00:05:25 +0000 (18:05 -0600)]
Remove deprecated functions Mapping::transform_*

9 years agoRemove some of the deprecated functions in SparsityPattern.
Wolfgang Bangerth [Thu, 22 Jan 2015 14:53:54 +0000 (08:53 -0600)]
Remove some of the deprecated functions in SparsityPattern.

9 years agoMerge pull request #467 from tjhei/fix_mpi_step39_test
Martin Kronbichler [Fri, 23 Jan 2015 14:35:07 +0000 (15:35 +0100)]
Merge pull request #467 from tjhei/fix_mpi_step39_test

fix tests/mpi/step-39

9 years agofix tests/mpi/step-39 467/head
Timo Heister [Fri, 23 Jan 2015 14:34:01 +0000 (09:34 -0500)]
fix tests/mpi/step-39

And yes, making a copy of the matrix was indeed a mistake here.

9 years agoMerge pull request #466 from tamiko/git_info_for_user_projects
Matthias Maier [Fri, 23 Jan 2015 14:02:05 +0000 (15:02 +0100)]
Merge pull request #466 from tamiko/git_info_for_user_projects

This is just a minor refactorization to allow to use the cmake stuff for

9 years agoUpdate documentation 466/head
Matthias Maier [Fri, 23 Jan 2015 13:38:56 +0000 (14:38 +0100)]
Update documentation

9 years agoCMake: Also export git branch and revision in deal.IIConfig.cmake and Make.global_options
Matthias Maier [Fri, 23 Jan 2015 13:31:35 +0000 (14:31 +0100)]
CMake: Also export git branch and revision in deal.IIConfig.cmake and Make.global_options

9 years agoCMake: Fix a typo - use .../cmake/macros (lowercase)
Matthias Maier [Wed, 21 Jan 2015 18:13:50 +0000 (19:13 +0100)]
CMake: Fix a typo - use .../cmake/macros (lowercase)

9 years agoCMake: allow to call DEAL_II_QUERY_GIT_INFORMATION from user projects
Matthias Maier [Wed, 21 Jan 2015 17:48:47 +0000 (18:48 +0100)]
CMake: allow to call DEAL_II_QUERY_GIT_INFORMATION from user projects

This commit enables to use the DEAL_II_QUERY_GIT_INFORMATION macro from
within user projects. In this case the variable prefix "DEAL_II_" is
ommited

9 years agoCMake: Refactor setup_git.cmake into its own macro
Matthias Maier [Wed, 21 Jan 2015 17:40:32 +0000 (18:40 +0100)]
CMake: Refactor setup_git.cmake into its own macro

9 years agoMerge pull request #465 from kronbichler/master
Wolfgang Bangerth [Fri, 23 Jan 2015 13:26:44 +0000 (07:26 -0600)]
Merge pull request #465 from kronbichler/master

Fill jacobians in FEFaceValues.

9 years agoFill jacobians in FEFaceValues. 465/head
Martin Kronbichler [Fri, 23 Jan 2015 09:38:10 +0000 (10:38 +0100)]
Fill jacobians in FEFaceValues.

The previous code did not fill the Jacobian transformations on
FEFaceValues and FESubfaceValues. This is now fixed for the various
mappings.

9 years agoRemove deprecated functions in ChunkSparsityPattern.
Wolfgang Bangerth [Thu, 22 Jan 2015 13:20:56 +0000 (07:20 -0600)]
Remove deprecated functions in ChunkSparsityPattern.

9 years agoMerge pull request #454 from dakshinai/filtered_matrix
Matthias Maier [Tue, 20 Jan 2015 07:24:44 +0000 (08:24 +0100)]
Merge pull request #454 from dakshinai/filtered_matrix

closes #454

9 years agofiltered_matrix test cases
dakshinai [Mon, 19 Jan 2015 08:16:05 +0000 (02:16 -0600)]
filtered_matrix test cases

9 years agoMerge pull request #460 from bangerth/provide-more-shape-function-pictures
Wolfgang Bangerth [Tue, 20 Jan 2015 02:58:19 +0000 (20:58 -0600)]
Merge pull request #460 from bangerth/provide-more-shape-function-pictures

Provide more shape function pictures

9 years agoAdd links to pictures of shape functions provided by Manuel Quezada de Luna. 460/head
Wolfgang Bangerth [Sun, 18 Jan 2015 22:14:33 +0000 (16:14 -0600)]
Add links to pictures of shape functions provided by Manuel Quezada de Luna.

9 years agoMerge pull request #458 from tamiko/fix_revision_h
Timo Heister [Tue, 20 Jan 2015 02:58:08 +0000 (21:58 -0500)]
Merge pull request #458 from tamiko/fix_revision_h

CMake: Export a string literal in revision.h

9 years agoMerge pull request #456 from tamiko/fix_includes
Wolfgang Bangerth [Tue, 20 Jan 2015 01:41:08 +0000 (19:41 -0600)]
Merge pull request #456 from tamiko/fix_includes

Fix include statements in testsuite

9 years agoMerge pull request #459 from tamiko/fix_a_warning
Wolfgang Bangerth [Tue, 20 Jan 2015 01:12:11 +0000 (19:12 -0600)]
Merge pull request #459 from tamiko/fix_a_warning

Testsuite: Fix a warning when configuring with cmake-3.1

9 years agoTestsuite: Fix a warning when configuring with cmake-3.1 459/head
Matthias Maier [Tue, 20 Jan 2015 00:00:58 +0000 (01:00 +0100)]
Testsuite: Fix a warning when configuring with cmake-3.1

9 years agoCMake: Export a string literal in revision.h 458/head
Matthias Maier [Mon, 19 Jan 2015 23:42:34 +0000 (00:42 +0100)]
CMake: Export a string literal in revision.h

9 years agoadd a forgotten changelog entry 456/head
Matthias Maier [Mon, 19 Jan 2015 19:28:18 +0000 (20:28 +0100)]
add a forgotten changelog entry

9 years agoTestsuite: Fix includes
Matthias Maier [Mon, 19 Jan 2015 19:23:46 +0000 (20:23 +0100)]
Testsuite: Fix includes

One of the previous changes removed [...]/deal.II from the list of include
directories. Consequently, it is now mandatory to prefix all deal.II
includes with deal.II/

9 years agoMerge pull request #455 from tjhei/prm_kept_open_bug
Matthias Maier [Mon, 19 Jan 2015 22:00:38 +0000 (23:00 +0100)]
Merge pull request #455 from tjhei/prm_kept_open_bug

fix ParameterHandler::leave_subsection and parsing

9 years agofix ParameterHandler::leave_subsection and parsing 455/head
Timo Heister [Mon, 19 Jan 2015 13:07:28 +0000 (08:07 -0500)]
fix ParameterHandler::leave_subsection and parsing

- leave_subsection() had a bool return value for success that doesn't
make sense because an Assert() would never allow false to be returned.
Remove this.
- read_input() would not complain about unbalanced 'subsection'/'end' in
the input. Instead, the ParameterHandler would just stay in that
subsection and so weird error messages about undefined entries would
show up later.
- One could argue that read_input() should always start and end with an
empty subsection path, but we didn't enforce this in the past and it
might be useful to read separate files not into the "top level".

9 years agoAdd links to pictures of shape functions provided by Manuel Quezada de Luna.
Wolfgang Bangerth [Sun, 18 Jan 2015 22:13:24 +0000 (16:13 -0600)]
Add links to pictures of shape functions provided by Manuel Quezada de Luna.

9 years agoAdd links to pictures of shape functions provided by Manuel Quezada de Luna.
Wolfgang Bangerth [Sun, 18 Jan 2015 22:11:21 +0000 (16:11 -0600)]
Add links to pictures of shape functions provided by Manuel Quezada de Luna.

9 years agoProvide a reference to where to find the shape functions.
Wolfgang Bangerth [Sun, 18 Jan 2015 20:58:32 +0000 (14:58 -0600)]
Provide a reference to where to find the shape functions.

9 years agoRemove a comment that I'm not sure is true any more.
Wolfgang Bangerth [Sun, 18 Jan 2015 20:57:28 +0000 (14:57 -0600)]
Remove a comment that I'm not sure is true any more.

It will turn out to be very difficult to keep in synch because it's not at the
place where the feature is actually implemented. Users will get to see an
error message in case they try to use this feature anyway.

9 years agoMerge pull request #451 from bangerth/fix-colorization
Matthias Maier [Sun, 18 Jan 2015 20:12:31 +0000 (21:12 +0100)]
Merge pull request #451 from bangerth/fix-colorization

Also colorize the edges, not just the faces, of a hypershell.

9 years agoMerge pull request #450 from bangerth/improve-error
Matthias Maier [Sun, 18 Jan 2015 20:07:20 +0000 (21:07 +0100)]
Merge pull request #450 from bangerth/improve-error

Improve an error message and provide guidance.

9 years agoMerge pull request #453 from bangerth/fixup-image-refs
Matthias Maier [Sun, 18 Jan 2015 20:06:49 +0000 (21:06 +0100)]
Merge pull request #453 from bangerth/fixup-image-refs

Fix up references to images.

9 years agoFix up references to images. 453/head
Wolfgang Bangerth [Sun, 18 Jan 2015 20:04:43 +0000 (14:04 -0600)]
Fix up references to images.

These references were broken just before the 8.2 release by a rogue script.

9 years agoMerge pull request #433 from tamiko/remove_compat_feature
Matthias Maier [Sun, 18 Jan 2015 19:11:15 +0000 (20:11 +0100)]
Merge pull request #433 from tamiko/remove_compat_feature

Remove compat feature

9 years agoProvide a changes.h entry 433/head
Matthias Maier [Tue, 13 Jan 2015 12:27:16 +0000 (13:27 +0100)]
Provide a changes.h entry

9 years agoRemove quirk
Matthias Maier [Tue, 13 Jan 2015 12:20:59 +0000 (13:20 +0100)]
Remove quirk

9 years agoCMake: Export Makefile compatible definitions
Matthias Maier [Tue, 13 Jan 2015 12:06:21 +0000 (13:06 +0100)]
CMake: Export Makefile compatible definitions

This commit reintroduces Make.global_options that closely mirrors the
information and layout of the CMake project configuration
deal.IIConfig.cmake.

it is intended for sourcing in Makefiles.

9 years agoCMake: Restructure library name creation and remove obsolete include
Matthias Maier [Mon, 12 Jan 2015 17:44:21 +0000 (18:44 +0100)]
CMake: Restructure library name creation and remove obsolete include

9 years agoRemove component COMPAT_FILES
Matthias Maier [Sun, 11 Jan 2015 15:50:45 +0000 (16:50 +0100)]
Remove component COMPAT_FILES

9 years agoMerge pull request #446 from luca-heltai/transition-to-manifold-examples
Wolfgang Bangerth [Sun, 18 Jan 2015 15:21:19 +0000 (09:21 -0600)]
Merge pull request #446 from luca-heltai/transition-to-manifold-examples

Transition to manifold - Part 1 - Examples 1 to 16

9 years agoAddressed last two comments on step-1. 446/head
Luca Heltai [Sun, 18 Jan 2015 10:31:32 +0000 (11:31 +0100)]
Addressed last two comments on step-1.

9 years agoMerge pull request #449 from davydden/opencascade
Matthias Maier [Sat, 17 Jan 2015 22:55:52 +0000 (23:55 +0100)]
Merge pull request #449 from davydden/opencascade

fix FindOPENCASCADE for OCC

9 years agoAlso colorize the edges, not just the faces, of a hypershell. 451/head
Wolfgang Bangerth [Sat, 17 Jan 2015 16:33:04 +0000 (10:33 -0600)]
Also colorize the edges, not just the faces, of a hypershell.

9 years agoImprove an error message and provide guidance. 450/head
Wolfgang Bangerth [Sat, 17 Jan 2015 16:05:10 +0000 (10:05 -0600)]
Improve an error message and provide guidance.

In response to a recent question on the mailing list.

9 years agofix FindOPENCASCADE for OCC 449/head
Denis Davydov [Sat, 17 Jan 2015 08:08:38 +0000 (09:08 +0100)]
fix FindOPENCASCADE for OCC

added mac[64,32]/clang/lib and lin[64,32]/gcc/lib to path_suffixes.

9 years agoFixed wolfgang comments.
Luca Heltai [Sat, 17 Jan 2015 01:41:30 +0000 (02:41 +0100)]
Fixed wolfgang comments.

9 years agoMerge pull request #447 from bangerth/improve-readme.md
Timo Heister [Fri, 16 Jan 2015 17:33:44 +0000 (12:33 -0500)]
Merge pull request #447 from bangerth/improve-readme.md

Improve wording slightly.

The existing instructions didn't make clear where the sources were located and
implicitly assumed that they are in the directory above the build
directory. This can be confusing.

(By suggestion of Joel Kulesza.)

9 years agoImprove wording slightly. 447/head
Wolfgang Bangerth [Fri, 16 Jan 2015 14:49:18 +0000 (08:49 -0600)]
Improve wording slightly.

The existing instructions didn't make clear where the sources were located and
implicitly assumed that they are in the directory above the build
directory. This can be confusing.

(By suggestion of Joel Kulesza.)

9 years agoUpdated changelog.
Luca Heltai [Thu, 15 Jan 2015 21:49:35 +0000 (22:49 +0100)]
Updated changelog.

9 years agoBoundary->Manifold in step-16.
Luca Heltai [Thu, 15 Jan 2015 16:45:45 +0000 (17:45 +0100)]
Boundary->Manifold in step-16.

9 years agoBoundary->Manifold in step-15.
Luca Heltai [Thu, 15 Jan 2015 16:42:27 +0000 (17:42 +0100)]
Boundary->Manifold in step-15.

9 years agoBoundary->Manifold in step-11.
Luca Heltai [Thu, 15 Jan 2015 16:30:17 +0000 (17:30 +0100)]
Boundary->Manifold in step-11.

9 years agoBoundary->Manifold in step-10.
Luca Heltai [Thu, 15 Jan 2015 16:22:44 +0000 (17:22 +0100)]
Boundary->Manifold in step-10.

9 years agoRemoved unnecessary header. Step-9.
Luca Heltai [Wed, 14 Jan 2015 15:17:43 +0000 (16:17 +0100)]
Removed unnecessary header. Step-9.

9 years agoRemoved unnecessary header. Step-8.
Luca Heltai [Wed, 14 Jan 2015 15:16:51 +0000 (16:16 +0100)]
Removed unnecessary header. Step-8.

9 years agoRemoved unnecessary header.
Luca Heltai [Wed, 14 Jan 2015 15:16:03 +0000 (16:16 +0100)]
Removed unnecessary header.

9 years agoBoundary->Manifold in step-6.
Luca Heltai [Wed, 14 Jan 2015 15:04:47 +0000 (16:04 +0100)]
Boundary->Manifold in step-6.

9 years agoBoundary->Manifold in step-5.
Luca Heltai [Wed, 14 Jan 2015 15:02:45 +0000 (16:02 +0100)]
Boundary->Manifold in step-5.

9 years agoBoundary->Manifold in step-2.
Luca Heltai [Wed, 14 Jan 2015 14:54:59 +0000 (15:54 +0100)]
Boundary->Manifold in step-2.

9 years agoFixed step-1 with manifold.
Luca Heltai [Mon, 12 Jan 2015 14:17:20 +0000 (15:17 +0100)]
Fixed step-1 with manifold.


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