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dealii.git
7 years agoMerge pull request #4321 from bangerth/unique-ptr
Martin Kronbichler [Wed, 26 Apr 2017 19:16:59 +0000 (21:16 +0200)]
Merge pull request #4321 from bangerth/unique-ptr

Simplify memory management in Patterns::List/Map.

7 years agoMerge pull request #4314 from bangerth/remove-deprecated-function-3
Martin Kronbichler [Wed, 26 Apr 2017 19:16:10 +0000 (21:16 +0200)]
Merge pull request #4314 from bangerth/remove-deprecated-function-3

Remove deprecated function FEValuesBase::get_normal_vectors().

7 years agoMerge pull request #4323 from masterleinad/fix_arpack_fp_test
Martin Kronbichler [Wed, 26 Apr 2017 19:15:08 +0000 (21:15 +0200)]
Merge pull request #4323 from masterleinad/fix_arpack_fp_test

Remove dependence on FunctionParser in ARPACK test

7 years agoMerge pull request #4088 from vishalkenchan/extend/GridTools/find_active_cell_around_...
Denis Davydov [Wed, 26 Apr 2017 17:59:05 +0000 (19:59 +0200)]
Merge pull request #4088 from vishalkenchan/extend/GridTools/find_active_cell_around_point

Extend/grid tools/find active cell around point

7 years agoAdd changelog entry. 4314/head
Wolfgang Bangerth [Tue, 25 Apr 2017 21:21:55 +0000 (15:21 -0600)]
Add changelog entry.

7 years agoRemove deprecated function FEValuesBase::get_normal_vectors().
Wolfgang Bangerth [Tue, 25 Apr 2017 21:21:37 +0000 (15:21 -0600)]
Remove deprecated function FEValuesBase::get_normal_vectors().

At the same time, recreate it with a different return type.

7 years agoRemove dependence on FunctionParser in ARPACK test 4323/head
Daniel Arndt [Wed, 26 Apr 2017 16:24:35 +0000 (18:24 +0200)]
Remove dependence on FunctionParser in ARPACK test

7 years agoMerge pull request #4306 from tjhei/hide_muparser
Wolfgang Bangerth [Wed, 26 Apr 2017 16:15:32 +0000 (10:15 -0600)]
Merge pull request #4306 from tjhei/hide_muparser

hide muparser definition

7 years agoSimplify memory management in Patterns::List/Map. 4321/head
Wolfgang Bangerth [Tue, 25 Apr 2017 17:51:39 +0000 (11:51 -0600)]
Simplify memory management in Patterns::List/Map.

7 years agoMerge pull request #4319 from kronbichler/remove_vectorization_include
Denis Davydov [Wed, 26 Apr 2017 11:03:11 +0000 (13:03 +0200)]
Merge pull request #4319 from kronbichler/remove_vectorization_include

Avoid including vectorization.h in a too central place

7 years agoAvoid including vectorization.h in a too central place 4319/head
Martin Kronbichler [Wed, 26 Apr 2017 09:18:45 +0000 (11:18 +0200)]
Avoid including vectorization.h in a too central place

7 years agoadded test for find_active_cell_around_point 4088/head
vishalkenchan [Wed, 26 Apr 2017 08:35:52 +0000 (10:35 +0200)]
added test for find_active_cell_around_point

7 years agoadded change log entry
vishalkenchan [Wed, 26 Apr 2017 08:35:00 +0000 (10:35 +0200)]
added change log entry

7 years agoextended find_closest_vertex() and find_active_cell_around_point()
vishalkenchan [Wed, 26 Apr 2017 08:31:58 +0000 (10:31 +0200)]
extended find_closest_vertex() and find_active_cell_around_point()
to take an optional custom mask for vertices.

7 years agoMerge pull request #4312 from bangerth/copy-patterns
Luca Heltai [Wed, 26 Apr 2017 07:58:47 +0000 (09:58 +0200)]
Merge pull request #4312 from bangerth/copy-patterns

Allow copying Patterns::List and Patterns::Map objects.

7 years agoMerge pull request #4311 from kronbichler/add_vectorization_diagnostics
Martin Kronbichler [Wed, 26 Apr 2017 07:21:03 +0000 (09:21 +0200)]
Merge pull request #4311 from kronbichler/add_vectorization_diagnostics

Add an error message for vectorization capability mismatch

7 years agoAdd an error message regarding vectorization instruction set mismatch 4311/head
Martin Kronbichler [Tue, 25 Apr 2017 17:24:48 +0000 (19:24 +0200)]
Add an error message regarding vectorization instruction set mismatch

7 years agoMerge pull request #4315 from bangerth/remove-deprecated-function-4
David Wells [Wed, 26 Apr 2017 01:13:48 +0000 (21:13 -0400)]
Merge pull request #4315 from bangerth/remove-deprecated-function-4

Remove deprecated functions in DataOutInterface.

7 years agoMerge pull request #4316 from bangerth/remove-deprecated-function-5
Denis Davydov [Tue, 25 Apr 2017 22:38:22 +0000 (00:38 +0200)]
Merge pull request #4316 from bangerth/remove-deprecated-function-5

Remove deprecated functions (hp::)DoFHandler::get_tria().

7 years agoAdd a changelog entry. 4316/head
Wolfgang Bangerth [Tue, 25 Apr 2017 22:35:46 +0000 (16:35 -0600)]
Add a changelog entry.

7 years agoRemove deprecated functions (hp::)DoFHandler::get_tria().
Wolfgang Bangerth [Tue, 25 Apr 2017 22:35:32 +0000 (16:35 -0600)]
Remove deprecated functions (hp::)DoFHandler::get_tria().

7 years agoAdd a changelog entry. 4315/head
Wolfgang Bangerth [Tue, 25 Apr 2017 22:33:59 +0000 (16:33 -0600)]
Add a changelog entry.

7 years agoRemove deprecated functions in DataOutBase.
Wolfgang Bangerth [Tue, 25 Apr 2017 22:32:21 +0000 (16:32 -0600)]
Remove deprecated functions in DataOutBase.

7 years agoAdjust test.
Wolfgang Bangerth [Tue, 25 Apr 2017 21:21:46 +0000 (15:21 -0600)]
Adjust test.

7 years agoAdd tests. 4312/head
Wolfgang Bangerth [Tue, 25 Apr 2017 17:40:41 +0000 (11:40 -0600)]
Add tests.

7 years agoAdd a changelog entry.
Wolfgang Bangerth [Tue, 25 Apr 2017 17:29:21 +0000 (11:29 -0600)]
Add a changelog entry.

7 years agoAllow copying Patterns::List and Patterns::Map objects.
Wolfgang Bangerth [Tue, 25 Apr 2017 17:28:01 +0000 (11:28 -0600)]
Allow copying Patterns::List and Patterns::Map objects.

Avoid the memory corruption that otherwise happens.

7 years agoMerge pull request #4309 from masterleinad/fix_boost_1_64_0
Wolfgang Bangerth [Tue, 25 Apr 2017 15:39:52 +0000 (09:39 -0600)]
Merge pull request #4309 from masterleinad/fix_boost_1_64_0

Fix compilation with BOOST 1.64

7 years agoMerge pull request #4295 from bangerth/parameter-handler-exceptions
David Wells [Tue, 25 Apr 2017 13:40:11 +0000 (09:40 -0400)]
Merge pull request #4295 from bangerth/parameter-handler-exceptions

Provide some guarantees with regard to exceptions in ParameterHandler.

7 years agoAdd alternative output for boost-1.64.0 4309/head
Daniel Arndt [Tue, 25 Apr 2017 13:10:09 +0000 (15:10 +0200)]
Add alternative output for boost-1.64.0

7 years agoMerge pull request #4308 from bangerth/avoid-warnings
David Wells [Tue, 25 Apr 2017 02:25:28 +0000 (22:25 -0400)]
Merge pull request #4308 from bangerth/avoid-warnings

Avoid a warning in optimized mode.

7 years agoFix compilation with BOOST 1.64
Daniel Arndt [Mon, 24 Apr 2017 22:29:49 +0000 (00:29 +0200)]
Fix compilation with BOOST 1.64

7 years agoAvoid a warning in optimized mode. 4308/head
Wolfgang Bangerth [Mon, 24 Apr 2017 22:05:45 +0000 (16:05 -0600)]
Avoid a warning in optimized mode.

7 years agoMerge pull request #4304 from bangerth/remove-ParameterHandler-read
Bruno Turcksin [Mon, 24 Apr 2017 21:39:03 +0000 (17:39 -0400)]
Merge pull request #4304 from bangerth/remove-ParameterHandler-read

Remove deprecated ParameterHandler::read_input*().

7 years agoAdd changelog entry. 4295/head
Wolfgang Bangerth [Fri, 21 Apr 2017 23:31:02 +0000 (17:31 -0600)]
Add changelog entry.

7 years agoAdd more tests.
Wolfgang Bangerth [Fri, 21 Apr 2017 23:30:45 +0000 (17:30 -0600)]
Add more tests.

7 years agoProvide some guarantees with regard to exceptions.
Wolfgang Bangerth [Fri, 21 Apr 2017 23:30:27 +0000 (17:30 -0600)]
Provide some guarantees with regard to exceptions.

7 years agohide muparser definition 4306/head
Timo Heister [Mon, 24 Apr 2017 15:19:46 +0000 (11:19 -0400)]
hide muparser definition

7 years agoMerge pull request #4303 from masterleinad/fix_missing_check
Denis Davydov [Mon, 24 Apr 2017 18:11:51 +0000 (20:11 +0200)]
Merge pull request #4303 from masterleinad/fix_missing_check

Add check for Trilinos return value

7 years agoMerge pull request #4300 from davydden/point_squared_distance
Daniel Arndt [Mon, 24 Apr 2017 17:33:41 +0000 (19:33 +0200)]
Merge pull request #4300 from davydden/point_squared_distance

add Point::squared_distance()

7 years agoAdd changelog file. 4304/head
Wolfgang Bangerth [Mon, 24 Apr 2017 17:23:09 +0000 (11:23 -0600)]
Add changelog file.

7 years agoRemove deprecated ParameterHandler::read_input*().
Wolfgang Bangerth [Mon, 24 Apr 2017 17:21:27 +0000 (11:21 -0600)]
Remove deprecated ParameterHandler::read_input*().

7 years agoConvert tests to use ParameterHandler::parse_input().
Wolfgang Bangerth [Mon, 24 Apr 2017 17:20:56 +0000 (11:20 -0600)]
Convert tests to use ParameterHandler::parse_input().

This test also requires not to use the old semantics of creating
input files that don't exist.

7 years agoConvert tests to use ParameterHandler::parse_input().
Wolfgang Bangerth [Mon, 24 Apr 2017 17:20:27 +0000 (11:20 -0600)]
Convert tests to use ParameterHandler::parse_input().

7 years agoAdd check for Trilinos return value 4303/head
Daniel Arndt [Mon, 24 Apr 2017 16:52:29 +0000 (18:52 +0200)]
Add check for Trilinos return value

7 years agoadd a test 4300/head
Denis Davydov [Mon, 24 Apr 2017 15:51:38 +0000 (17:51 +0200)]
add a test

7 years agorename
Denis Davydov [Mon, 24 Apr 2017 14:56:24 +0000 (16:56 +0200)]
rename

7 years agoMerge pull request #4296 from kronbichler/fix_epetra_vector
Bruno Turcksin [Mon, 24 Apr 2017 14:39:32 +0000 (10:39 -0400)]
Merge pull request #4296 from kronbichler/fix_epetra_vector

Make deal.II compile with Trilinos but without MPI

7 years agoadd Point::squared_distance()
Denis Davydov [Mon, 24 Apr 2017 12:03:44 +0000 (14:03 +0200)]
add Point::squared_distance()

7 years agoMerge pull request #4298 from tjhei/install_muparser_headers
Wolfgang Bangerth [Mon, 24 Apr 2017 02:28:47 +0000 (20:28 -0600)]
Merge pull request #4298 from tjhei/install_muparser_headers

Install muparser headers

7 years agoInstall muparser headers 4298/head
Timo Heister [Sun, 23 Apr 2017 21:29:41 +0000 (17:29 -0400)]
Install muparser headers

This fixes compilation error introduced by #4285 (muparser.h now
needs to be accessible for user projects).

7 years agoMake deal.II compile with Trilinos but without MPI. 4296/head
Martin Kronbichler [Sat, 22 Apr 2017 13:02:28 +0000 (15:02 +0200)]
Make deal.II compile with Trilinos but without MPI.

7 years agoMerge pull request #4289 from bangerth/doc-update
Daniel Arndt [Thu, 20 Apr 2017 22:33:12 +0000 (00:33 +0200)]
Merge pull request #4289 from bangerth/doc-update

Minor doc update to TriaAccessor::center.

7 years agoMerge pull request #4290 from bangerth/doc-update-2
Daniel Arndt [Thu, 20 Apr 2017 19:22:03 +0000 (21:22 +0200)]
Merge pull request #4290 from bangerth/doc-update-2

Update documentation of TriaAccessor::barycenter.

7 years agoMerge pull request #4291 from danshapero/tria-unique-ptrs
Bruno Turcksin [Thu, 20 Apr 2017 18:14:30 +0000 (14:14 -0400)]
Merge pull request #4291 from danshapero/tria-unique-ptrs

Replaced tria members with unique ptrs

7 years agoReplaced tria members with unique ptrs 4291/head
danshapero [Wed, 19 Apr 2017 14:48:39 +0000 (07:48 -0700)]
Replaced tria members with unique ptrs

7 years agoMerge pull request #4285 from resetius/msvc-tbb
David Wells [Thu, 20 Apr 2017 14:28:11 +0000 (10:28 -0400)]
Merge pull request #4285 from resetius/msvc-tbb

MSVC: fix compilation with tbb

7 years agoMerge pull request #4292 from tjhei/msvc_readme
David Wells [Thu, 20 Apr 2017 14:25:46 +0000 (10:25 -0400)]
Merge pull request #4292 from tjhei/msvc_readme

update readme regarding MSVC

7 years agoupdate readme regarding MSVC 4292/head
Timo Heister [Thu, 20 Apr 2017 14:23:47 +0000 (10:23 -0400)]
update readme regarding MSVC

- We no longer support msvc 2013 (no constexpr support)
- MSVC 2015 and 2017 work correctly

7 years agoUpdate documentation of TriaAccessor::barycenter. 4290/head
Wolfgang Bangerth [Wed, 19 Apr 2017 19:38:02 +0000 (13:38 -0600)]
Update documentation of TriaAccessor::barycenter.

7 years agoMerge pull request #4288 from bangerth/fix-tests
Daniel Arndt [Thu, 20 Apr 2017 13:18:22 +0000 (15:18 +0200)]
Merge pull request #4288 from bangerth/fix-tests

Fix tests by performing an explicit cast.

7 years agoMinor doc update to TriaAccessor::center. 4289/head
Wolfgang Bangerth [Wed, 19 Apr 2017 19:31:06 +0000 (13:31 -0600)]
Minor doc update to TriaAccessor::center.

7 years agoFix tests by performing an explicit cast. 4288/head
Wolfgang Bangerth [Wed, 19 Apr 2017 19:18:26 +0000 (13:18 -0600)]
Fix tests by performing an explicit cast.

7 years agoMerge pull request #4275 from bangerth/doc-update-2
Daniel Arndt [Wed, 19 Apr 2017 16:59:54 +0000 (18:59 +0200)]
Merge pull request #4275 from bangerth/doc-update-2

Minor doc updates to GridTools.

7 years agoMerge pull request #4287 from davydden/fix_tests_extract_dofs_with_support_contained_...
Wolfgang Bangerth [Wed, 19 Apr 2017 16:47:41 +0000 (10:47 -0600)]
Merge pull request #4287 from davydden/fix_tests_extract_dofs_with_support_contained_within

fix extract_dofs_with_support_contained_within tests

7 years agoMSVC: fix compilation with tbb 4285/head
Alexey Ozeritsky [Wed, 19 Apr 2017 09:35:26 +0000 (12:35 +0300)]
MSVC: fix compilation with tbb

7 years agoMerge pull request #4277 from bangerth/use-unique-ptr
Bruno Turcksin [Wed, 19 Apr 2017 12:43:42 +0000 (08:43 -0400)]
Merge pull request #4277 from bangerth/use-unique-ptr

Use std::unique_ptr instead of std::shared_ptr in FESystem.

7 years agofix tests 4287/head
Denis Davydov [Wed, 19 Apr 2017 11:17:26 +0000 (13:17 +0200)]
fix tests

7 years agoMerge pull request #4276 from bangerth/disallow-copying-fesystem
Daniel Arndt [Wed, 19 Apr 2017 09:01:59 +0000 (11:01 +0200)]
Merge pull request #4276 from bangerth/disallow-copying-fesystem

Disallow copying FESystem objects.

7 years agoMerge pull request #4283 from bangerth/avoid-warning
Daniel Arndt [Wed, 19 Apr 2017 09:01:48 +0000 (11:01 +0200)]
Merge pull request #4283 from bangerth/avoid-warning

Avoid a warning in release mode.

7 years agoMerge pull request #4278 from davydden/fe_enriched_cxx11
Daniel Arndt [Tue, 18 Apr 2017 22:55:41 +0000 (00:55 +0200)]
Merge pull request #4278 from davydden/fe_enriched_cxx11

remove CXX14 requirement from FE_Enriched as we switched to C++11 of …

7 years agoAvoid a warning in release mode. 4283/head
Wolfgang Bangerth [Tue, 18 Apr 2017 22:38:49 +0000 (16:38 -0600)]
Avoid a warning in release mode.

7 years agoMerge pull request #4230 from masterleinad/cxx17_new
Wolfgang Bangerth [Tue, 18 Apr 2017 21:31:35 +0000 (15:31 -0600)]
Merge pull request #4230 from masterleinad/cxx17_new

Use C++17's [[fallthrough]]

7 years agoMerge pull request #4266 from resetius/win32-amd-linkage
Wolfgang Bangerth [Tue, 18 Apr 2017 21:30:20 +0000 (15:30 -0600)]
Merge pull request #4266 from resetius/win32-amd-linkage

MSVS: fix linkage

7 years agoMerge pull request #4281 from masterleinad/fix_petsc_complex
Denis Davydov [Tue, 18 Apr 2017 21:14:45 +0000 (23:14 +0200)]
Merge pull request #4281 from masterleinad/fix_petsc_complex

Fix compilation for complex-valued PETSc

7 years agoFix compilation for complex-valued PETSc 4281/head
Daniel Arndt [Tue, 18 Apr 2017 20:53:46 +0000 (22:53 +0200)]
Fix compilation for complex-valued PETSc

7 years agoUse std::unique_ptr instead of std::shared_ptr in FESystem. 4277/head
Wolfgang Bangerth [Tue, 18 Apr 2017 02:51:27 +0000 (20:51 -0600)]
Use std::unique_ptr instead of std::shared_ptr in FESystem.

7 years agoMerge pull request #4260 from luca-heltai/install-examples-executables
Wolfgang Bangerth [Tue, 18 Apr 2017 16:51:28 +0000 (10:51 -0600)]
Merge pull request #4260 from luca-heltai/install-examples-executables

Install examples if they are built.

7 years agoInstall to examples directories. 4260/head
Luca Heltai [Tue, 18 Apr 2017 15:27:39 +0000 (17:27 +0200)]
Install to examples directories.

7 years agoMerge pull request #4274 from bangerth/actions-for-ParameterHandler
Daniel Arndt [Tue, 18 Apr 2017 10:12:18 +0000 (12:12 +0200)]
Merge pull request #4274 from bangerth/actions-for-ParameterHandler

Actions for parameter handler

7 years agoremove CXX14 requirement from FE_Enriched as we switched to C++11 of gcc4.8 and alike 4278/head
Denis Davydov [Tue, 18 Apr 2017 09:03:12 +0000 (11:03 +0200)]
remove CXX14 requirement from FE_Enriched as we switched to C++11 of gcc4.8 and alike

7 years agoMerge pull request #4255 from luca-heltai/doi-step-54
Luca Heltai [Tue, 18 Apr 2017 07:18:01 +0000 (09:18 +0200)]
Merge pull request #4255 from luca-heltai/doi-step-54

Added doi to step-54.

7 years agoRemove a test that is now no longer relevant. 4276/head
Wolfgang Bangerth [Tue, 18 Apr 2017 01:56:12 +0000 (19:56 -0600)]
Remove a test that is now no longer relevant.

7 years agoAdd changelog.
Wolfgang Bangerth [Tue, 18 Apr 2017 01:55:00 +0000 (19:55 -0600)]
Add changelog.

7 years agoDisallow copying FESystem objects.
Wolfgang Bangerth [Tue, 18 Apr 2017 01:51:28 +0000 (19:51 -0600)]
Disallow copying FESystem objects.

7 years agoMinor doc updates to GridTools. 4275/head
Wolfgang Bangerth [Tue, 18 Apr 2017 01:52:13 +0000 (19:52 -0600)]
Minor doc updates to GridTools.

7 years agoAdd changelog entry. 4274/head
Wolfgang Bangerth [Mon, 17 Apr 2017 22:19:29 +0000 (16:19 -0600)]
Add changelog entry.

7 years agoAdd tests.
Wolfgang Bangerth [Mon, 17 Apr 2017 22:17:19 +0000 (16:17 -0600)]
Add tests.

7 years agoAdd the possibility of executing an 'action' to ParameterHandler.
Wolfgang Bangerth [Wed, 12 Apr 2017 18:48:39 +0000 (12:48 -0600)]
Add the possibility of executing an 'action' to ParameterHandler.

7 years agoMerge pull request #4271 from bangerth/remove-deprecated-functions-4
Bruno Turcksin [Tue, 18 Apr 2017 00:01:18 +0000 (20:01 -0400)]
Merge pull request #4271 from bangerth/remove-deprecated-functions-4

Convert two tests to a new interface.

7 years agoMerge pull request #4270 from bangerth/remove-deprecated-functions-3
Bruno Turcksin [Mon, 17 Apr 2017 23:58:04 +0000 (19:58 -0400)]
Merge pull request #4270 from bangerth/remove-deprecated-functions-3

Use the new DataPostprocessor interface in PointValueHistory.

7 years agoMSVS: fix linkage 4266/head
Alexey Ozeritsky [Sun, 16 Apr 2017 21:08:57 +0000 (00:08 +0300)]
MSVS: fix linkage

7 years agoMerge pull request #3957 from Rombur/vector
Bruno Turcksin [Mon, 17 Apr 2017 15:02:28 +0000 (11:02 -0400)]
Merge pull request #3957 from Rombur/vector

[Post 8.5] Instantiate new Trilinos Vector.

7 years agoMerge pull request #4265 from masterleinad/fix_meshworker_codim
Daniel Arndt [Mon, 17 Apr 2017 14:09:56 +0000 (16:09 +0200)]
Merge pull request #4265 from masterleinad/fix_meshworker_codim

Instantiate MeshWorker objects for dim != spacedim

7 years agoMerge pull request #4272 from masterleinad/clang_emplace
Wolfgang Bangerth [Mon, 17 Apr 2017 12:58:30 +0000 (06:58 -0600)]
Merge pull request #4272 from masterleinad/clang_emplace

Replace push_back by emplace_back

7 years agoInstantiate LinearAlgebra::EpetraWrappers::Vector. 3957/head
Bruno Turcksin [Fri, 10 Feb 2017 14:27:10 +0000 (09:27 -0500)]
Instantiate LinearAlgebra::EpetraWrappers::Vector.

7 years agoadd test 4265/head
Daniel Arndt [Mon, 17 Apr 2017 12:17:18 +0000 (14:17 +0200)]
add test

7 years agoAugment VectorSpaceVector interface.
Bruno Turcksin [Fri, 10 Feb 2017 14:26:33 +0000 (09:26 -0500)]
Augment VectorSpaceVector interface.

7 years agoclang-tidy emplace_back 4272/head
Daniel Arndt [Mon, 17 Apr 2017 11:19:16 +0000 (13:19 +0200)]
clang-tidy emplace_back

7 years agoMerge pull request #4268 from bangerth/remove-deprecated-functions-2
Denis Davydov [Mon, 17 Apr 2017 04:55:32 +0000 (06:55 +0200)]
Merge pull request #4268 from bangerth/remove-deprecated-functions-2

Remove implementation of FE::interpolate() from FE_Q_DGQ0.


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