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https://gitweb.dealii.org/ - dealii.git/log
Jean-Paul Pelteret [Wed, 15 Nov 2017 12:44:12 +0000 (13:44 +0100)]
Add a unifying header for auto-differentation.
Jean-Paul Pelteret [Wed, 15 Nov 2017 12:37:18 +0000 (13:37 +0100)]
Add initial outline of documentation for the AD/SD module.
Denis Davydov [Wed, 15 Nov 2017 12:08:55 +0000 (13:08 +0100)]
Merge pull request #5467 from davydden/fix_deprecated_bug
fix deprecation bug
Denis Davydov [Wed, 15 Nov 2017 10:52:52 +0000 (11:52 +0100)]
fix deprecation bug
Daniel Arndt [Wed, 15 Nov 2017 09:05:59 +0000 (10:05 +0100)]
Merge pull request #5464 from vishalkenchan/rol/vector_adaptor
suppress use of ROL for older versions of Trilinos
Daniel Arndt [Wed, 15 Nov 2017 09:05:13 +0000 (10:05 +0100)]
Merge pull request #5465 from sairajat/AssertionAdd
Added Assert in fe_values.h to ensure fe_values object is reinited to cell
RAJAT ARORA [Tue, 14 Nov 2017 18:18:10 +0000 (13:18 -0500)]
Checked Indentation
Jean-Paul Pelteret [Tue, 14 Nov 2017 18:15:13 +0000 (19:15 +0100)]
Merge pull request #5463 from jppelteret/sacado_complex_rad_guard
Detect a compiler bug that prevents compilation of complex Sacado::Rad.
RAJAT ARORA [Tue, 14 Nov 2017 18:13:13 +0000 (13:13 -0500)]
Added Assert in fe_values.h to ensure fe_values object is reinited to a cell
vishalkenchan [Tue, 14 Nov 2017 17:45:24 +0000 (18:45 +0100)]
recommend enabling ROL package while building Trilinos
vishalkenchan [Tue, 14 Nov 2017 16:35:14 +0000 (17:35 +0100)]
suppress use of ROL for older versions of Trilinos
Denis Davydov [Tue, 14 Nov 2017 14:54:51 +0000 (15:54 +0100)]
Merge pull request #5462 from masterleinad/fix_test_project_03
Fix numerics/project_03
Timo Heister [Tue, 14 Nov 2017 14:48:46 +0000 (09:48 -0500)]
Merge pull request #5459 from masterleinad/use_c++14_deprecated
Use c++14's [[deprecated]] if possible
Jean-Paul Pelteret [Tue, 14 Nov 2017 14:31:45 +0000 (15:31 +0100)]
Detect a compiler bug that prevents compilation of complex Sacado::Rad.
Wolfgang Bangerth [Tue, 14 Nov 2017 13:37:24 +0000 (06:37 -0700)]
Merge pull request #5443 from davydden/vtu_binary
filter XML binary output in some tests
Daniel Arndt [Tue, 14 Nov 2017 13:04:10 +0000 (14:04 +0100)]
Fix numerics/project_03
Jean-Paul Pelteret [Tue, 14 Nov 2017 08:32:38 +0000 (09:32 +0100)]
Merge pull request #5461 from jppelteret/fix_5455
Add header to tests using Sacado::Rad.
Daniel Arndt [Mon, 13 Nov 2017 22:40:06 +0000 (23:40 +0100)]
Use [[deprecated]] if available
Jean-Paul Pelteret [Tue, 14 Nov 2017 06:35:45 +0000 (07:35 +0100)]
Add header to tests using Sacado::Rad.
For some older versions of Trilinos, the header for templated
Sacado::Rad numbers is missing from Sacado.hpp.
Wolfgang Bangerth [Tue, 14 Nov 2017 05:11:40 +0000 (22:11 -0700)]
Merge pull request #5385 from tjhei/prm_escape_latex
escape characters in LaTeX format of ParameterHandler
Daniel Arndt [Mon, 13 Nov 2017 21:39:27 +0000 (22:39 +0100)]
Fix position of DEAL_II_DEPRECATED
Denis Davydov [Sun, 12 Nov 2017 19:47:02 +0000 (20:47 +0100)]
filter out binary data from XML output for some data_out tests
Wolfgang Bangerth [Mon, 13 Nov 2017 17:13:31 +0000 (10:13 -0700)]
Merge pull request #5452 from masterleinad/merge_grid_tools
Merge parallel::GridTools into GridTools
Denis Davydov [Sun, 12 Nov 2017 19:20:05 +0000 (20:20 +0100)]
cleanup a few data_out_base_vtu tests
Daniel Arndt [Mon, 13 Nov 2017 14:56:33 +0000 (15:56 +0100)]
Update changelog entries
Daniel Arndt [Mon, 13 Nov 2017 14:51:39 +0000 (15:51 +0100)]
Reintroduce distributed/grid_tools.h for a deprecation warning
Wolfgang Bangerth [Mon, 13 Nov 2017 14:38:45 +0000 (07:38 -0700)]
Merge pull request #5447 from masterleinad/deprecate_vector_view
Deprecate VectorView
Wolfgang Bangerth [Mon, 13 Nov 2017 14:35:26 +0000 (07:35 -0700)]
Merge pull request #5453 from tjhei/petsc_lu_doc
update documentation for PETSc PreconditionLU
Timo Heister [Mon, 13 Nov 2017 14:05:16 +0000 (09:05 -0500)]
update documentation for PETSc PreconditionLU
Daniel Arndt [Mon, 13 Nov 2017 11:37:24 +0000 (12:37 +0100)]
Merge distributed/grid_tools into grid/grid_tools
Daniel Arndt [Sun, 12 Nov 2017 20:35:40 +0000 (21:35 +0100)]
Remove 'parallel' prefix in distributed/grid_tools
Martin Kronbichler [Mon, 13 Nov 2017 13:33:35 +0000 (14:33 +0100)]
Merge pull request #5448 from bangerth/add-instantiation
Add a missing instantiation.
Daniel Arndt [Mon, 13 Nov 2017 00:42:42 +0000 (01:42 +0100)]
Merge pull request #5444 from masterleinad/fix_interface_matrix_entry
Fix missing include file in multigrid/interface_matrix_entry_01
Daniel Arndt [Sun, 12 Nov 2017 23:59:58 +0000 (00:59 +0100)]
Move deprecation declaration at the end
Wolfgang Bangerth [Sun, 12 Nov 2017 23:30:29 +0000 (16:30 -0700)]
Add a test.
Wolfgang Bangerth [Sun, 12 Nov 2017 23:13:41 +0000 (16:13 -0700)]
Add changelog entry.
Wolfgang Bangerth [Sun, 12 Nov 2017 23:13:34 +0000 (16:13 -0700)]
Add missing instantiation of function.
Daniel Arndt [Sun, 12 Nov 2017 21:09:31 +0000 (22:09 +0100)]
Deprecate VectorView
Wolfgang Bangerth [Sun, 12 Nov 2017 21:11:19 +0000 (14:11 -0700)]
Merge pull request #5445 from drwells/update-gdbinit
Update the GDB pretty-printer.
Wolfgang Bangerth [Sun, 12 Nov 2017 21:10:48 +0000 (14:10 -0700)]
Merge pull request #5446 from drwells/convert-to-utf8
Prefer UTF-8 to latin-1.
David Wells [Sun, 12 Nov 2017 20:56:13 +0000 (15:56 -0500)]
Prefer UTF-8 to latin-1.
David Wells [Sun, 12 Nov 2017 20:52:15 +0000 (15:52 -0500)]
Update the GDB pretty-printer.
The data array variable was renamed from 'val' to 'values' in
2faae204c26.
Daniel Arndt [Sun, 12 Nov 2017 20:35:40 +0000 (21:35 +0100)]
Fix missing include filed in multigrid/interface_matrix_entry_01
David Wells [Sun, 12 Nov 2017 19:33:57 +0000 (14:33 -0500)]
Merge pull request #5442 from davydden/fix_illegal_character
fix illegal character (<F6> instead of oe)
Denis Davydov [Sun, 12 Nov 2017 19:26:45 +0000 (20:26 +0100)]
fix illegal character (<F6> instead of oe)
Jean-Paul Pelteret [Fri, 10 Nov 2017 21:02:53 +0000 (22:02 +0100)]
Merge pull request #5439 from kronbichler/extend_trilinos_direct_solver
Let Trilinos direct solver use given factorization with LA::distributed::Vector
Timo Heister [Fri, 10 Nov 2017 19:23:16 +0000 (14:23 -0500)]
move to namespace
Timo Heister [Fri, 10 Nov 2017 18:03:17 +0000 (13:03 -0500)]
Merge pull request #5434 from tjhei/test_dos_2_unix
fix dos formatted files in contrib/utilities/indent
Jean-Paul Pelteret [Fri, 10 Nov 2017 15:46:45 +0000 (16:46 +0100)]
Merge pull request #5380 from vishalkenchan/rol/vector_adaptor
Using Trilinos/ROL library
Martin Kronbichler [Fri, 10 Nov 2017 14:33:31 +0000 (15:33 +0100)]
Add test.
Martin Kronbichler [Fri, 10 Nov 2017 13:52:33 +0000 (14:52 +0100)]
Changelog
Martin Kronbichler [Fri, 10 Nov 2017 13:50:09 +0000 (14:50 +0100)]
Enable Trilinos direct solvers with LA::distributed::Vector.
vishalkenchan [Fri, 10 Nov 2017 09:15:36 +0000 (10:15 +0100)]
added rol tests
vishalkenchan [Fri, 10 Nov 2017 09:15:12 +0000 (10:15 +0100)]
add a vector adaptor to use Trilinos/ROL library; added cmake variable DEAL_II_TRILINOS_WITH_ROL
Timo Heister [Thu, 9 Nov 2017 18:58:51 +0000 (13:58 -0500)]
fix dos formatted files in contrib/utilities/indent
Martin Kronbichler [Thu, 9 Nov 2017 20:19:07 +0000 (21:19 +0100)]
Merge pull request #5408 from kronbichler/speedup_spherical_manifold
Speed up SphericalManifold::get_new_point
Timo Heister [Thu, 9 Nov 2017 18:27:19 +0000 (13:27 -0500)]
Merge pull request #5433 from bangerth/fix-inst.in
Rename class groups in template-arguments.in.
Denis Davydov [Thu, 9 Nov 2017 17:30:45 +0000 (18:30 +0100)]
Merge pull request #5430 from bangerth/new-tests
Add tests for VectorTools::integrate_difference() using complex data types.
Wolfgang Bangerth [Thu, 9 Nov 2017 15:08:54 +0000 (08:08 -0700)]
Rename class groups in template-arguments.in.
The previous name no longer adequately represented what these classes were. Fix this.
Timo Heister [Thu, 9 Nov 2017 16:06:42 +0000 (11:06 -0500)]
Merge pull request #5428 from bangerth/set-perms
Set file permissions in the indentation script.
Denis Davydov [Thu, 9 Nov 2017 15:06:22 +0000 (16:06 +0100)]
Merge pull request #5431 from bangerth/add-changelog
Add a changelog entry for complex-valued vectors.
Wolfgang Bangerth [Thu, 9 Nov 2017 15:00:24 +0000 (08:00 -0700)]
Add a changelog entry for complex-valued vectors.
Wolfgang Bangerth [Thu, 9 Nov 2017 14:52:31 +0000 (07:52 -0700)]
Add tests for VectorTools::integrate_difference() using complex data types.
Wolfgang Bangerth [Thu, 9 Nov 2017 14:52:03 +0000 (07:52 -0700)]
Minor adjustments to one test.
Martin Kronbichler [Thu, 9 Nov 2017 08:17:33 +0000 (09:17 +0100)]
Merge pull request #5419 from bangerth/more-complex
Allow outputting complex-valued data through DataOut.
Jean-Paul Pelteret [Thu, 9 Nov 2017 05:36:45 +0000 (06:36 +0100)]
Merge pull request #5429 from bangerth/instantiations
Instantiate some more functions for the codim-1 case.
Wolfgang Bangerth [Thu, 9 Nov 2017 00:22:10 +0000 (17:22 -0700)]
Instantiate some more functions for the codim-1 case.
While there, also simplify the file slightly.
Wolfgang Bangerth [Wed, 8 Nov 2017 20:15:18 +0000 (13:15 -0700)]
Set file permissions in the indentation script.
Wolfgang Bangerth [Wed, 8 Nov 2017 19:56:36 +0000 (12:56 -0700)]
Add more tests that check both real and complex-valued output at the same time.
Wolfgang Bangerth [Wed, 8 Nov 2017 19:52:26 +0000 (12:52 -0700)]
Simplify code a bit.
Jean-Paul Pelteret [Wed, 8 Nov 2017 19:37:22 +0000 (20:37 +0100)]
Merge pull request #5423 from drwells/fix-unity-build
Disambiguate parallel::GridTools and GridTools.
Matthias Maier [Wed, 8 Nov 2017 17:46:01 +0000 (11:46 -0600)]
Merge pull request #5424 from bangerth/fix-test
Fix test.
Matthias Maier [Wed, 8 Nov 2017 17:45:42 +0000 (11:45 -0600)]
Merge pull request #5425 from bangerth/fix-line-endings
Consistently use UNIX line endings.
Wolfgang Bangerth [Wed, 8 Nov 2017 17:42:04 +0000 (10:42 -0700)]
Consistently use UNIX line endings.
Wolfgang Bangerth [Wed, 8 Nov 2017 17:31:47 +0000 (10:31 -0700)]
Convert DOS to Unix line endings.
Wolfgang Bangerth [Wed, 8 Nov 2017 17:29:06 +0000 (10:29 -0700)]
Fix test output.
Matthias Maier [Wed, 8 Nov 2017 17:27:55 +0000 (11:27 -0600)]
Merge pull request #5391 from jppelteret/ad-product_types
Implement more product types for AD numbers
Wolfgang Bangerth [Wed, 8 Nov 2017 16:45:52 +0000 (09:45 -0700)]
Merge pull request #5422 from tjhei/doxygen_deprecated
doxygen: fix deprecated function signatures
Jean-Paul Pelteret [Wed, 8 Nov 2017 16:36:08 +0000 (17:36 +0100)]
Include Adol-C product types header in fe_values
Fixes #5420
David Wells [Wed, 8 Nov 2017 16:30:56 +0000 (11:30 -0500)]
Disambiguate parallel::GridTools and GridTools.
Jean-Paul Pelteret [Fri, 3 Nov 2017 18:56:53 +0000 (19:56 +0100)]
Implement ProductType for Adol-C numbers
Jean-Paul Pelteret [Fri, 3 Nov 2017 18:56:01 +0000 (19:56 +0100)]
Add support and implement ProductType for Trilinos Sacado::Rad numbers
Jean-Paul Pelteret [Wed, 8 Nov 2017 15:30:03 +0000 (16:30 +0100)]
Merge pull request #5421 from jppelteret/fix_5420
Fix expansion for Adol-C numbers
Timo Heister [Wed, 8 Nov 2017 14:49:44 +0000 (09:49 -0500)]
doxygen: fix deprecatedfunction signatures
Deprecated functions show up with a trailing "1". Fix this.
Example: has_generalized_face_support_points() in http://www.dealii.org/developer/doxygen/deal.II/classFiniteElement.html
Timo Heister [Wed, 8 Nov 2017 14:31:16 +0000 (09:31 -0500)]
break
Timo Heister [Wed, 8 Nov 2017 14:22:44 +0000 (09:22 -0500)]
update
Jean-Paul Pelteret [Wed, 8 Nov 2017 13:40:40 +0000 (14:40 +0100)]
Fix expansion for Adol-C numbers
Bruno Turcksin [Wed, 8 Nov 2017 13:21:50 +0000 (08:21 -0500)]
Merge pull request #5358 from GivAlz/new_distribute_bboxes
New function parallel::GridTools::exchange_local_bounding_boxes
Giovanni Alzetta [Fri, 27 Oct 2017 12:45:10 +0000 (12:45 +0000)]
Added function parallel::GridTools::exchange_local_bounding_boxes and tests
Martin Kronbichler [Wed, 8 Nov 2017 09:17:03 +0000 (10:17 +0100)]
Merge pull request #5406 from tcclevenger/interface_matrix_entry
Add functionality to create sparsity pattern for MG interface matrices
Wolfgang Bangerth [Wed, 8 Nov 2017 04:18:05 +0000 (21:18 -0700)]
Add a test for the cell-data case.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:17:03 +0000 (21:17 -0700)]
Output complex-valued data for cell data.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:03:06 +0000 (21:03 -0700)]
Add another test for a vector element.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:00:47 +0000 (21:00 -0700)]
Add a test for a vector element.
Wolfgang Bangerth [Wed, 8 Nov 2017 03:56:59 +0000 (20:56 -0700)]
Add a test for a scalar element.
Wolfgang Bangerth [Wed, 8 Nov 2017 03:56:39 +0000 (20:56 -0700)]
Output both real and imaginary parts of the solution.
Wolfgang Bangerth [Wed, 8 Nov 2017 00:55:49 +0000 (17:55 -0700)]
Deal better with complex-valued vectors.
Specifically, add a safety check, and correctly count real/imaginary part as two.
Bruno Turcksin [Wed, 8 Nov 2017 01:36:01 +0000 (20:36 -0500)]
Merge pull request #5382 from jppelteret/ad-build_template_arguments
Update build system template arguments for AD number types.
Bruno Turcksin [Wed, 8 Nov 2017 01:24:56 +0000 (20:24 -0500)]
Merge pull request #5418 from bangerth/cleanups
Minor updates to DoFRenumbering::Cuthill_McKee.
Wolfgang Bangerth [Tue, 7 Nov 2017 22:51:55 +0000 (15:51 -0700)]
Revert an if-else and other restructuring.
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