https://gitweb.dealii.org/ - dealii-svn.git/log

]> https://gitweb.dealii.org/ - dealii-svn.git/log

bangerth [Sat, 10 Jan 2009 00:26:55 +0000 (00:26 +0000)]

Match output precision to avoid up- or down-rounding.

git-svn-id: https://svn.dealii.org/trunk@18177 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 10 Jan 2009 00:16:09 +0000 (00:16 +0000)]

Fix output files, adjusting to Guido's recent changes.

git-svn-id: https://svn.dealii.org/trunk@18175 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 10 Jan 2009 00:08:46 +0000 (00:08 +0000)]

Use a precision that doesn't lead to .5 round-up or round-down.

git-svn-id: https://svn.dealii.org/trunk@18174 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Jan 2009 23:13:14 +0000 (23:13 +0000)]

xref step-33.

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bangerth [Fri, 9 Jan 2009 22:38:14 +0000 (22:38 +0000)]

Take over functionally neutral changes from branch_threading_building_blocks to make a few further changes I'd like to do on mainline simpler.

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kanschat [Fri, 9 Jan 2009 21:21:16 +0000 (21:21 +0000)]

more cleaning of FE_RT

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kanschat [Fri, 9 Jan 2009 21:20:55 +0000 (21:20 +0000)]

new support faces for FE_RTN

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kanschat [Fri, 9 Jan 2009 20:40:08 +0000 (20:40 +0000)]

do some cleaning in the RT elements

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kanschat [Fri, 9 Jan 2009 20:35:34 +0000 (20:35 +0000)]

r18134 did not compile

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kronbichler [Fri, 9 Jan 2009 19:53:11 +0000 (19:53 +0000)]

Some more changes in the AMG settings. The option Uncoupled seems fine up to very large matrices, but we should be aware of the fact that it might sometimes fail.

git-svn-id: https://svn.dealii.org/trunk@18162 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Jan 2009 19:42:07 +0000 (19:42 +0000)]

Oops, checked in on the wrong branch. Undo previous commit.

git-svn-id: https://svn.dealii.org/trunk@18160 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Jan 2009 19:40:43 +0000 (19:40 +0000)]

First attempt at getting things to work in non-MT mode without TBB.

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bangerth [Fri, 9 Jan 2009 19:22:43 +0000 (19:22 +0000)]

Update test results.

git-svn-id: https://svn.dealii.org/trunk@18158 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 9 Jan 2009 18:44:12 +0000 (18:44 +0000)]

Need a setting that is the same on all processors :-(.

git-svn-id: https://svn.dealii.org/trunk@18157 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 9 Jan 2009 18:40:46 +0000 (18:40 +0000)]

Need to change the settings in AMG setup once again.

git-svn-id: https://svn.dealii.org/trunk@18156 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 9 Jan 2009 17:32:29 +0000 (17:32 +0000)]

Raise the threshold for output. Regenerate output files.

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kronbichler [Fri, 9 Jan 2009 17:09:21 +0000 (17:09 +0000)]

Wrong parameter.

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kronbichler [Fri, 9 Jan 2009 17:04:59 +0000 (17:04 +0000)]

Some minor changes in AMG preconditioner to make it more stable in parallel.

git-svn-id: https://svn.dealii.org/trunk@18152 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 9 Jan 2009 10:42:00 +0000 (10:42 +0000)]

Simplified a the refine grid function a bit.

git-svn-id: https://svn.dealii.org/trunk@18149 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 8 Jan 2009 20:09:53 +0000 (20:09 +0000)]

Avoid accessing elements beyond the end of a tensor. Use the opportunity to add an assertion.

git-svn-id: https://svn.dealii.org/trunk@18141 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 8 Jan 2009 18:27:52 +0000 (18:27 +0000)]

No need to use @ref when refering to another tutorial program.

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bangerth [Thu, 8 Jan 2009 16:01:33 +0000 (16:01 +0000)]

Fix a snafu from last night: the function I moved into an internal namespace is still used from another file. Unfortunately, I forgot to also remove the declaration of the function, so the code continued to compile, but wouldn't link. Fix this by re-surrecting the function. By tweaking the interface a bit it actually made for a nice function that could as well be public.

git-svn-id: https://svn.dealii.org/trunk@18136 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Thu, 8 Jan 2009 14:37:42 +0000 (14:37 +0000)]

Avoid gcc4.1.2 warning: call of overloaded check(int, int) is ambiguous. candidates are: void check(unsigned int, unsigned int) [with FE = dealii::FE_Q] and void check(unsigned int, unsigned int) [with FE = dealii::FE_Q], etc...

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kronbichler [Thu, 8 Jan 2009 13:59:59 +0000 (13:59 +0000)]

Provide an implementation of hyper_shell_boundary in 3D.

git-svn-id: https://svn.dealii.org/trunk@18133 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Thu, 8 Jan 2009 10:27:05 +0000 (10:27 +0000)]

A few PETSc helper functions

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bangerth [Thu, 8 Jan 2009 01:18:55 +0000 (01:18 +0000)]

Move the remaining private functions of the DoFTools class into an internal namespace that only lives in the .cc file. No need to expose implementation details and cluttering up the documentation.

git-svn-id: https://svn.dealii.org/trunk@18129 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Thu, 8 Jan 2009 00:02:15 +0000 (00:02 +0000)]

comparison files adjusted for roundoff errors due to changes in Mapping

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kanschat [Thu, 8 Jan 2009 00:00:16 +0000 (00:00 +0000)]

transformations moved into Mapping

git-svn-id: https://svn.dealii.org/trunk@18127 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 7 Jan 2009 15:03:36 +0000 (15:03 +0000)]

Tests for Trilinos sparsity pattern.

git-svn-id: https://svn.dealii.org/trunk@18119 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 7 Jan 2009 15:03:00 +0000 (15:03 +0000)]

Some more functions in TrilinosWrappers::SparsityPattern.

git-svn-id: https://svn.dealii.org/trunk@18118 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 7 Jan 2009 08:54:52 +0000 (08:54 +0000)]

Need to set up MPI_InitFinalize for Trilinos programs to make them work for both serial and MPI compilers.

git-svn-id: https://svn.dealii.org/trunk@18113 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 7 Jan 2009 08:32:50 +0000 (08:32 +0000)]

The step-33 tutorial program now uses Trilinos wrapper classes almost everywhere, which reduces the amount of code.

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kronbichler [Wed, 7 Jan 2009 08:10:00 +0000 (08:10 +0000)]

The Timer class can now also return the wall time for a calculation.

git-svn-id: https://svn.dealii.org/trunk@18111 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 7 Jan 2009 08:06:20 +0000 (08:06 +0000)]

Timer class can now also return the wall time.

git-svn-id: https://svn.dealii.org/trunk@18110 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 22:31:32 +0000 (22:31 +0000)]

Regenerate.

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kanschat [Tue, 6 Jan 2009 21:20:35 +0000 (21:20 +0000)]

roundoff

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kanschat [Tue, 6 Jan 2009 21:20:20 +0000 (21:20 +0000)]

roundoff

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kanschat [Tue, 6 Jan 2009 21:20:12 +0000 (21:20 +0000)]

use new Piola transform for vector valued functions

git-svn-id: https://svn.dealii.org/trunk@18102 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 20:09:36 +0000 (20:09 +0000)]

Add the ability to do things like 'export CXX="g++ -pg" ; ./configure', i.e. pass a program PLUS arguments through CXX.

git-svn-id: https://svn.dealii.org/trunk@18101 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 17:35:42 +0000 (17:35 +0000)]

Avoid a couple of warnings by xlC.

git-svn-id: https://svn.dealii.org/trunk@18100 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 6 Jan 2009 14:25:48 +0000 (14:25 +0000)]

Ignore test zero boundary constraints generated files

git-svn-id: https://svn.dealii.org/trunk@18099 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 6 Jan 2009 14:23:48 +0000 (14:23 +0000)]

Test zero boundary constraints

git-svn-id: https://svn.dealii.org/trunk@18098 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 04:49:31 +0000 (04:49 +0000)]

Add a dummy return value in an unreachable place.

git-svn-id: https://svn.dealii.org/trunk@18097 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 04:47:42 +0000 (04:47 +0000)]

Work around a silly bug in xlC by shuffling the order of include files. xlC otherwise won't recognize an explicit instantiation of a class template member template.

git-svn-id: https://svn.dealii.org/trunk@18096 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 04:41:37 +0000 (04:41 +0000)]

Use XX="$abc" instead of XX=$abc to avoid problems when abc is a variable that contains spaces. Also remove a left-over from the time when we used kdoc for documentation.

git-svn-id: https://svn.dealii.org/trunk@18093 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 6 Jan 2009 04:36:35 +0000 (04:36 +0000)]

Add a TODO.

git-svn-id: https://svn.dealii.org/trunk@18092 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 5 Jan 2009 22:04:45 +0000 (22:04 +0000)]

finite elements use new transform functions now

git-svn-id: https://svn.dealii.org/trunk@18087 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 5 Jan 2009 21:13:20 +0000 (21:13 +0000)]

new Mapping::transform implemented, but not used

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kanschat [Mon, 5 Jan 2009 20:10:47 +0000 (20:10 +0000)]

eliminate offset from old Mapping::transform functions

git-svn-id: https://svn.dealii.org/trunk@18084 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 5 Jan 2009 20:10:15 +0000 (20:10 +0000)]

roundoff

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kanschat [Mon, 5 Jan 2009 19:36:30 +0000 (19:36 +0000)]

roundoff

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kanschat [Mon, 5 Jan 2009 16:52:48 +0000 (16:52 +0000)]

introduce function transform() into Mappings

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kronbichler [Mon, 5 Jan 2009 16:03:01 +0000 (16:03 +0000)]

Corrected the make_mass_function that had a bug when assembling together with right hand side functions.

git-svn-id: https://svn.dealii.org/trunk@18072 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 5 Jan 2009 07:41:24 +0000 (07:41 +0000)]

Undo one unnecessary change.

git-svn-id: https://svn.dealii.org/trunk@18070 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 5 Jan 2009 07:38:24 +0000 (07:38 +0000)]

Provide some more Trilinos preconditioners and solvers.

git-svn-id: https://svn.dealii.org/trunk@18069 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 30 Dec 2008 11:20:01 +0000 (11:20 +0000)]

Projection of functions can be done more efficiently by simulaneously creating mass matrix and right hand side vector.

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bangerth [Tue, 30 Dec 2008 03:32:33 +0000 (03:32 +0000)]

Mention license.

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bangerth [Tue, 30 Dec 2008 03:26:51 +0000 (03:26 +0000)]

Avoid complaints by doxygen that it can't find a link to a parameter escaped by a hash mark.

git-svn-id: https://svn.dealii.org/trunk@18055 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 30 Dec 2008 03:26:08 +0000 (03:26 +0000)]

Remove ambiguous language.

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bangerth [Mon, 29 Dec 2008 23:22:25 +0000 (23:22 +0000)]

Remove some old cruft that happened to be still in this program.

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bangerth [Mon, 29 Dec 2008 22:12:33 +0000 (22:12 +0000)]

Fix doc markup in a number of places. Move one internal function from the private section of the class to the .cc file.

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bangerth [Mon, 29 Dec 2008 22:11:48 +0000 (22:11 +0000)]

Add to documentation.

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kronbichler [Mon, 29 Dec 2008 17:57:48 +0000 (17:57 +0000)]

Mention Trilinos parallel sparsity pattern.

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kronbichler [Mon, 29 Dec 2008 15:14:33 +0000 (15:14 +0000)]

Updated step-32 to use parallel Trilinos sparsity pattern.

git-svn-id: https://svn.dealii.org/trunk@18041 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 29 Dec 2008 03:35:09 +0000 (03:35 +0000)]

Move a fixed test. Rename one that still fails.

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bangerth [Mon, 29 Dec 2008 03:33:45 +0000 (03:33 +0000)]

Augment comments.

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bangerth [Mon, 29 Dec 2008 03:17:05 +0000 (03:17 +0000)]

Add comments. Fix code.

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bangerth [Mon, 29 Dec 2008 03:16:04 +0000 (03:16 +0000)]

Improve documentation.

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kronbichler [Sun, 28 Dec 2008 14:04:26 +0000 (14:04 +0000)]

Use a cache of column indices to improve the speed of the Trilinos sparsity pattern generation.

git-svn-id: https://svn.dealii.org/trunk@18036 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 28 Dec 2008 04:35:46 +0000 (04:35 +0000)]

Do another cast to placate gcc3.3

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bangerth [Sun, 28 Dec 2008 03:48:24 +0000 (03:48 +0000)]

Unify (a bit tediously) two more sets of functions into common templates.

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bangerth [Sun, 28 Dec 2008 01:32:07 +0000 (01:32 +0000)]

Add output.

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bangerth [Sun, 28 Dec 2008 01:25:31 +0000 (01:25 +0000)]

A reduced version of kelly_crash_01

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kronbichler [Sat, 27 Dec 2008 20:45:08 +0000 (20:45 +0000)]

Undo accidental change in Trilinos block solver.

git-svn-id: https://svn.dealii.org/trunk@18022 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sat, 27 Dec 2008 20:42:06 +0000 (20:42 +0000)]

Added a function TrilinosWrappers::SparsityPattern that can generate distributed sparsity patterns for use with Trilinos sparse matrices.

git-svn-id: https://svn.dealii.org/trunk@18021 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 27 Dec 2008 16:06:45 +0000 (16:06 +0000)]

Write the cast in a different way in hopes to make it compile with gcc 3.3.1

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bangerth [Sat, 27 Dec 2008 05:09:24 +0000 (05:09 +0000)]

Make memory_consumption() more accurate.

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bangerth [Sat, 27 Dec 2008 04:08:47 +0000 (04:08 +0000)]

Fix comment.

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heltai [Thu, 25 Dec 2008 10:38:23 +0000 (10:38 +0000)]

Fixed multiple instantiations when both 1d and 2d libs are linked against a program.

git-svn-id: https://svn.dealii.org/trunk@18011 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Tue, 23 Dec 2008 14:37:37 +0000 (14:37 +0000)]

Remove totally outdated test references for the MIPSpro compiler. This compiler is not capable anymore to compile deal.II anyway.

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hartmann [Tue, 23 Dec 2008 14:22:45 +0000 (14:22 +0000)]

Add changes entries for the last three commits.

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hartmann [Tue, 23 Dec 2008 14:11:26 +0000 (14:11 +0000)]

Bring patch deal.II_DLR@5590 (leicht) to deal.II: Test anisotropic embedding and restriction matrices of FE_Q.

git-svn-id: https://svn.dealii.org/trunk@18005 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Tue, 23 Dec 2008 14:09:12 +0000 (14:09 +0000)]

Bring patch deal.II_DLR@5588 to deal.II (leicht): Supply anisotropic restriction and embedding matrices for FE_Q.

git-svn-id: https://svn.dealii.org/trunk@18004 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Tue, 23 Dec 2008 13:17:22 +0000 (13:17 +0000)]

Generalize test to handle anisotropic children. Test new functionality from patch 18002.

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hartmann [Tue, 23 Dec 2008 13:13:17 +0000 (13:13 +0000)]

Bring patch deal.II_DLR@5587 to deal.II: Let the functions tranforming mother to child coordinates (and vice versa) handle anisotropic children.

git-svn-id: https://svn.dealii.org/trunk@18002 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Tue, 23 Dec 2008 12:42:10 +0000 (12:42 +0000)]

Bring bug fix from deal.II_DLR@6149 to deal.II: Remove a (serious) bug where we created wrong meshes in 3D cases with both anisotropic refinement and non-standard line orientation.

git-svn-id: https://svn.dealii.org/trunk@18001 0785d39b-7218-0410-832d-ea1e28bc413d

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hartmann [Tue, 23 Dec 2008 12:17:38 +0000 (12:17 +0000)]

The test output had changed due to patch 16450: Fixed bug in find_cells_adjacent_to_vertex. Now update the test refs accordingly.

git-svn-id: https://svn.dealii.org/trunk@18000 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 22 Dec 2008 17:09:33 +0000 (17:09 +0000)]

A few functions could be made faster by smarter access to the mapping data.

git-svn-id: https://svn.dealii.org/trunk@17999 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 18 Dec 2008 03:03:47 +0000 (03:03 +0000)]

Fix the misleading output of an assertion in a few places.

git-svn-id: https://svn.dealii.org/trunk@17993 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 18 Dec 2008 00:43:36 +0000 (00:43 +0000)]

Make compile. How did this work for Guido?

git-svn-id: https://svn.dealii.org/trunk@17986 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Wed, 17 Dec 2008 21:26:46 +0000 (21:26 +0000)]

replace a restriction by a warning in the documentation

git-svn-id: https://svn.dealii.org/trunk@17981 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Wed, 17 Dec 2008 21:17:45 +0000 (21:17 +0000)]

enable computation of embedding matrices for elements not supporting anisotropic refinement

git-svn-id: https://svn.dealii.org/trunk@17980 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 15:51:23 +0000 (15:51 +0000)]

Use get_function_laplacians for the residual.

git-svn-id: https://svn.dealii.org/trunk@17974 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 11:47:09 +0000 (11:47 +0000)]

Ensure that FEValuesExtractors objects are copyable.

git-svn-id: https://svn.dealii.org/trunk@17968 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 11:40:03 +0000 (11:40 +0000)]

Fix caption of an entry.

git-svn-id: https://svn.dealii.org/trunk@17967 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 01:29:22 +0000 (01:29 +0000)]

Properly guard a mutable variable in the MappingQEulerian class.

git-svn-id: https://svn.dealii.org/trunk@17962 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 01:24:36 +0000 (01:24 +0000)]

Minor cleanup: Make a couple of variables const and move initialization appropriately.

git-svn-id: https://svn.dealii.org/trunk@17961 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 17 Dec 2008 01:21:04 +0000 (01:21 +0000)]

Add a couple of functions in a second version.

git-svn-id: https://svn.dealii.org/trunk@17960 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 16 Dec 2008 23:51:01 +0000 (23:51 +0000)]

Use a single space character rather than a string with a single space.

git-svn-id: https://svn.dealii.org/trunk@17958 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 16 Dec 2008 16:41:55 +0000 (16:41 +0000)]

do fail last

git-svn-id: https://svn.dealii.org/trunk@17957 0785d39b-7218-0410-832d-ea1e28bc413d

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