https://gitweb.dealii.org/ - dealii-svn.git/log

]> https://gitweb.dealii.org/ - dealii-svn.git/log

kanschat [Wed, 10 Feb 2010 03:06:44 +0000 (03:06 +0000)]

change function calls and data structures in mesh worker to conform to work stream

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bangerth [Wed, 10 Feb 2010 01:04:58 +0000 (01:04 +0000)]

Output a bit more information on levels.

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bangerth [Wed, 10 Feb 2010 00:24:32 +0000 (00:24 +0000)]

Write first sentence.

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bangerth [Wed, 10 Feb 2010 00:21:08 +0000 (00:21 +0000)]

Escape a command.

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bangerth [Wed, 10 Feb 2010 00:16:56 +0000 (00:16 +0000)]

Add coefficient class. Currently not used.

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bangerth [Tue, 9 Feb 2010 23:59:12 +0000 (23:59 +0000)]

Bring closer to what we do in step-6.

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bangerth [Tue, 9 Feb 2010 23:45:58 +0000 (23:45 +0000)]

Write more.

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bangerth [Tue, 9 Feb 2010 23:31:38 +0000 (23:31 +0000)]

Escape a word.

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kronbichler [Tue, 9 Feb 2010 11:21:29 +0000 (11:21 +0000)]

Update copy_indices - use std::vector instead of std::map.

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janssen [Tue, 9 Feb 2010 10:26:50 +0000 (10:26 +0000)]

initialize the MGLevelObject correctly

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janssen [Tue, 9 Feb 2010 08:50:39 +0000 (08:50 +0000)]

put some output to debug>3

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bangerth [Mon, 8 Feb 2010 23:54:21 +0000 (23:54 +0000)]

Make sure we use the included boost library. This isn't going to work if
someone tries to use an external boost version, but I can't see right now how
that would work in the first place. At least we'd have to test this once or twice.

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janssen [Mon, 8 Feb 2010 12:48:48 +0000 (12:48 +0000)]

MGTransferSelect prepared for use on adaptive meshes

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kronbichler [Mon, 8 Feb 2010 11:35:07 +0000 (11:35 +0000)]

Change setting of boundary conditions in prolongation matrix.

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kanschat [Fri, 5 Feb 2010 21:34:00 +0000 (21:34 +0000)]

fix argument by value and do not use user_flags anymore

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bangerth [Fri, 5 Feb 2010 17:59:20 +0000 (17:59 +0000)]

Some more words.

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bangerth [Fri, 5 Feb 2010 17:51:15 +0000 (17:51 +0000)]

Minor adjustments.

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kronbichler [Fri, 5 Feb 2010 17:50:16 +0000 (17:50 +0000)]

Use same code as in sparse_decomposition for importing a Trilinos matrix from a deal.II matrix, i.e., allow for different sparsity structures.

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bangerth [Fri, 5 Feb 2010 17:33:19 +0000 (17:33 +0000)]

Reference the mg paper.

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kanschat [Fri, 5 Feb 2010 17:12:09 +0000 (17:12 +0000)]

rename functions IntegrationInfo::fe to fe_values

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janssen [Fri, 5 Feb 2010 16:19:23 +0000 (16:19 +0000)]

some output should only occur if debug>2

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janssen [Fri, 5 Feb 2010 15:38:48 +0000 (15:38 +0000)]

now there is an instance for extract_inner_interface_dofs in 1d

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janssen [Fri, 5 Feb 2010 15:09:50 +0000 (15:09 +0000)]

fixed the name of a vector

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janssen [Fri, 5 Feb 2010 15:05:22 +0000 (15:05 +0000)]

changed the initialization of a vector back to the original state

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janssen [Fri, 5 Feb 2010 14:02:51 +0000 (14:02 +0000)]

make it compatible to older versions that didn't need boundary_indices in build_matrices

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janssen [Fri, 5 Feb 2010 13:56:31 +0000 (13:56 +0000)]

prepared MGTransferSelect for adaptive refinement, cleaned up mg_dof_tools.cc

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janssen [Fri, 5 Feb 2010 13:50:34 +0000 (13:50 +0000)]

prepared the MGTransferSelect for adaptive refinement, cleaned up in mg_tools.h

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kronbichler [Fri, 5 Feb 2010 11:59:37 +0000 (11:59 +0000)]

When initializing a sparse decomposition (ILU etc) with an additional sparsity pattern, this sparsity pattern does not need to be a superset of the matrix sparsity pattern. This is allows e.g. to initialize an ILU with neglecting some zeros (Dirichlet boundary nodes) in the decomposition sparsity pattern without copying the matrix.

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kronbichler [Fri, 5 Feb 2010 11:53:27 +0000 (11:53 +0000)]

More flexibility with initializing a Trilinos sparse matrix from a deal.II sparse matrix.

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kronbichler [Fri, 5 Feb 2010 08:28:09 +0000 (08:28 +0000)]

Correctly set copy_indices when refinement is done.

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bangerth [Fri, 5 Feb 2010 04:07:25 +0000 (04:07 +0000)]

Bring up to standard with regard to multigrid on adaptive meshes.

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bangerth [Fri, 5 Feb 2010 01:46:28 +0000 (01:46 +0000)]

Add necessary output files.

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bangerth [Fri, 5 Feb 2010 00:07:55 +0000 (00:07 +0000)]

Adjust test results to also make them work with gcc 4.1.

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kronbichler [Thu, 4 Feb 2010 16:25:37 +0000 (16:25 +0000)]

Use a shortcut to the vector in copy_to_mg.

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kronbichler [Thu, 4 Feb 2010 15:13:00 +0000 (15:13 +0000)]

Set matrix size by std::size_t, not unsigned int, since on very large matrices with more than four billion nonzeros we might end up in setting the wrong matrix size.

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kronbichler [Thu, 4 Feb 2010 15:11:54 +0000 (15:11 +0000)]

Express memory consumption in std::size_t since this can be quite large numbers.

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kronbichler [Thu, 4 Feb 2010 15:06:04 +0000 (15:06 +0000)]

Allow even float matrices.

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kronbichler [Thu, 4 Feb 2010 15:04:13 +0000 (15:04 +0000)]

Use vector<shared_ptr<const vector> > instead of plain pointers in order to correctly free memory.

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kronbichler [Thu, 4 Feb 2010 11:24:09 +0000 (11:24 +0000)]

Simplify generation of copy_indices: do this from a std::vector that stores the mapping level_indices <> global_indices, which avoids sorting indices and compressing out duplicates.

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kronbichler [Thu, 4 Feb 2010 11:22:51 +0000 (11:22 +0000)]

Simplify smoother usage a little bit. Avoid setting elements in vvectors that will be overwritten anyway.

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kronbichler [Thu, 4 Feb 2010 11:21:42 +0000 (11:21 +0000)]

Update in one comment. Remove trailing whitespace.

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kronbichler [Thu, 4 Feb 2010 08:08:18 +0000 (08:08 +0000)]

Undo free of static variable.

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kronbichler [Wed, 3 Feb 2010 15:59:43 +0000 (15:59 +0000)]

Fix a memory leak.

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bangerth [Wed, 3 Feb 2010 14:35:01 +0000 (14:35 +0000)]

Two more.

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bangerth [Wed, 3 Feb 2010 00:18:22 +0000 (00:18 +0000)]

Fix markup.

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young [Mon, 1 Feb 2010 16:01:59 +0000 (16:01 +0000)]

Corrected accent and grammer errors

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kronbichler [Mon, 1 Feb 2010 15:55:59 +0000 (15:55 +0000)]

Use std::vector<std::pair<uint,uint> > instead of std::map<uint,uint> for describing the transfer from and to multigrid. This is considerably faster. Also improve imposition of boundary conditions in mg_transfer_prebuilt

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young [Mon, 1 Feb 2010 15:52:50 +0000 (15:52 +0000)]

Added paper to publication record

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kronbichler [Mon, 1 Feb 2010 12:46:10 +0000 (12:46 +0000)]

Fix compile problem.

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kronbichler [Mon, 1 Feb 2010 12:41:43 +0000 (12:41 +0000)]

Use new features introduced in branch_distributed_grids even in mainline.

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bangerth [Fri, 29 Jan 2010 17:19:21 +0000 (17:19 +0000)]

Check in a long-forgotten change.

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bangerth [Fri, 29 Jan 2010 17:05:57 +0000 (17:05 +0000)]

Ignore errors when making nofail as part of report.

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bangerth [Fri, 29 Jan 2010 15:53:42 +0000 (15:53 +0000)]

On machines with lots of processors, one or two long-running tests in
subdirectories can stop the progress of 'make report'. To prevent this, first
compile and run all tests once in parallel across all directories, and then
just do the report sequentially through the directories.

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bangerth [Thu, 28 Jan 2010 23:10:38 +0000 (23:10 +0000)]

Update some more tests.

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bangerth [Thu, 28 Jan 2010 21:10:31 +0000 (21:10 +0000)]

Add to list.

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bangerth [Thu, 28 Jan 2010 21:03:32 +0000 (21:03 +0000)]

Update a bunch of output files.

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bangerth [Thu, 28 Jan 2010 17:10:07 +0000 (17:10 +0000)]

Use numbers::PI instead of hard coding macros.

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bangerth [Thu, 28 Jan 2010 17:08:54 +0000 (17:08 +0000)]

Fix another race condition.

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bangerth [Thu, 28 Jan 2010 17:04:05 +0000 (17:04 +0000)]

Fix the same bug in PolynomialsABF.

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bangerth [Thu, 28 Jan 2010 16:28:25 +0000 (16:28 +0000)]

Fix a race condition in PolynomialsBDM.

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bangerth [Wed, 27 Jan 2010 20:52:31 +0000 (20:52 +0000)]

add

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bangerth [Wed, 27 Jan 2010 20:44:45 +0000 (20:44 +0000)]

Treat all directories in /examples with doxygen that have a doc/ subdirectory.

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kormann [Wed, 27 Jan 2010 19:22:06 +0000 (19:22 +0000)]

Added tests for FE_Q with non-equidistant support points.

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kormann [Wed, 27 Jan 2010 19:20:32 +0000 (19:20 +0000)]

Correct error in restriction matrix for FE_Q defined by quadrature formula.

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kronbichler [Wed, 27 Jan 2010 14:53:14 +0000 (14:53 +0000)]

Ignore also *d2 output data as created in this program.

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bangerth [Wed, 27 Jan 2010 14:24:54 +0000 (14:24 +0000)]

Michael Geiger's diploma thesis.

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kronbichler [Wed, 27 Jan 2010 13:22:36 +0000 (13:22 +0000)]

Add function that can extract diagonal subblock from ConstraintMatrix.

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kanschat [Mon, 25 Jan 2010 21:31:12 +0000 (21:31 +0000)]

step 39 works again

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kanschat [Mon, 25 Jan 2010 16:38:19 +0000 (16:38 +0000)]

step 39 compiles, but crashes in estimate, because hessians are not computed

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heister [Mon, 25 Jan 2010 15:14:53 +0000 (15:14 +0000)]

Missed one output file in tests/petsc

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kanschat [Mon, 25 Jan 2010 15:06:59 +0000 (15:06 +0000)]

remove debug output

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heister [Mon, 25 Jan 2010 09:33:23 +0000 (09:33 +0000)]

tests/petsc: more cleanup

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heister [Mon, 25 Jan 2010 09:09:13 +0000 (09:09 +0000)]

work on petsc unit tests, make them pass on my machine too

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bangerth [Mon, 25 Jan 2010 00:46:45 +0000 (00:46 +0000)]

Better tolerances.

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bangerth [Mon, 25 Jan 2010 00:44:45 +0000 (00:44 +0000)]

Update.

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bangerth [Mon, 25 Jan 2010 00:40:04 +0000 (00:40 +0000)]

Update test results.

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bangerth [Mon, 25 Jan 2010 00:38:43 +0000 (00:38 +0000)]

Destroy the memory pool of PETSc vectors before we end PETSc itself. We'll get memory corruption problems otherwise.

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bangerth [Mon, 25 Jan 2010 00:35:06 +0000 (00:35 +0000)]

Update test results.

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bangerth [Mon, 25 Jan 2010 00:26:57 +0000 (00:26 +0000)]

Update.

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bangerth [Mon, 25 Jan 2010 00:20:35 +0000 (00:20 +0000)]

Update results.

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bangerth [Mon, 25 Jan 2010 00:15:56 +0000 (00:15 +0000)]

Fix output.

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bangerth [Mon, 25 Jan 2010 00:15:38 +0000 (00:15 +0000)]

Make it work.

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bangerth [Mon, 25 Jan 2010 00:05:22 +0000 (00:05 +0000)]

Make at least compile.

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bangerth [Sun, 24 Jan 2010 23:43:31 +0000 (23:43 +0000)]

Fix a recently introduced bug where we started counting from too high.

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bangerth [Sat, 23 Jan 2010 03:49:58 +0000 (03:49 +0000)]

When doing 'make clean', also remove *.inst files. Not doing so can lead to really awkward problems when you ^C the program that creates the *.inst files -- they end up empty, but have a newer date than the .inst.in file. Compiling everything then leads to missing symbols, but doing 'make clean ; make all' doesn't help any because the .inst files are not regenerated.

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bangerth [Wed, 20 Jan 2010 20:10:21 +0000 (20:10 +0000)]

Rename bdry->boundary, ngbr->neighbor.

git-svn-id: https://svn.dealii.org/trunk@20413 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 20:04:00 +0000 (20:04 +0000)]

Update documentation.

git-svn-id: https://svn.dealii.org/trunk@20412 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 19:59:05 +0000 (19:59 +0000)]

Get rid of the IntegratingAssembler class

git-svn-id: https://svn.dealii.org/trunk@20411 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 14:51:53 +0000 (14:51 +0000)]

First step in getting rid of the AssemblingIntegrator class and splitting its functionality into two parts.

git-svn-id: https://svn.dealii.org/trunk@20402 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 14:37:52 +0000 (14:37 +0000)]

Minor cleanup, documentation fixes.

git-svn-id: https://svn.dealii.org/trunk@20401 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:35:12 +0000 (13:35 +0000)]

Get rid again of the DGIntegrator class and re-merge everything into
the main class.

git-svn-id: https://svn.dealii.org/trunk@20400 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:19:26 +0000 (13:19 +0000)]

Use const references instead of copies.

git-svn-id: https://svn.dealii.org/trunk@20399 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:17:19 +0000 (13:17 +0000)]

Use function<> objects rather than hard-coded names to represent operations.

git-svn-id: https://svn.dealii.org/trunk@20398 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:17:03 +0000 (13:17 +0000)]

Use function<> objects rather than hard-coded names to represent operations.

git-svn-id: https://svn.dealii.org/trunk@20397 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:01:57 +0000 (13:01 +0000)]

Remove unused local variable.

git-svn-id: https://svn.dealii.org/trunk@20396 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 13:01:27 +0000 (13:01 +0000)]

Simplify code slightly.

git-svn-id: https://svn.dealii.org/trunk@20395 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 20 Jan 2010 01:15:03 +0000 (01:15 +0000)]

Minor simplification.

git-svn-id: https://svn.dealii.org/trunk@20394 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 19 Jan 2010 23:36:24 +0000 (23:36 +0000)]

Make function more generic by taking function<> objects rather than
member functions with fixed name.

git-svn-id: https://svn.dealii.org/trunk@20393 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 19 Jan 2010 16:53:12 +0000 (16:53 +0000)]

Also encode the library path through -rpath when linking with static libs, since we also link with the TBB and that one is always shared.

git-svn-id: https://svn.dealii.org/trunk@20388 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sun, 17 Jan 2010 22:50:54 +0000 (22:50 +0000)]

Extract integral parameters with get_integer().

git-svn-id: https://svn.dealii.org/trunk@20382 0785d39b-7218-0410-832d-ea1e28bc413d

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